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Neuropathogenesis caused by Trypanosoma brucei, still an enigma to be unveiled. 布氏锥虫引起的神经发病机制,仍是一个未解之谜。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-04-01 DOI: 10.15698/mic2021.04.745
Katherine Figarella

Trypanosoma brucei is one of the protozoa parasites that can enter the brain and cause injury associated with toxic effects of parasite-derived molecules or with immune responses against infection. Other protozoa parasites with brain tropism include Toxoplasma, Plasmodium, Amoeba, and, eventually, other Trypanosomatids such as T. cruzi and Leishmania. Together, these parasites affect billions of people worldwide and are responsible for more than 500.000 deaths annually. Factors determining brain tropism, mechanisms of invasion as well as processes ongoing inside the brain are not well understood. But, they depend on the parasite involved. The pathogenesis caused by T. brucei initiates locally in the area of parasite inoculation, soon trypanosomes rich the blood, and the disease enters in the so-called early stage. The pathomechanisms in this phase have been described, even molecules used to combat the disease are effective during this period. Later, the disease evolves towards a late-stage, characterized by the presence of parasites in the central nervous system (CNS), the so-called meningo-encephalitic stage. This phase of the disease has not been sufficiently examined and remains a matter of investigation. Here, I stress the importance of delve into the study of the neuropathogenesis caused by T. brucei, which will enable the identification of pathways that may be targeted to overcome parasites that reached the CNS. Finally, I highlight the impact that the application of tools developed in the last years in the field of neuroscience will have on the study of neglected tropical diseases.

布鲁氏锥虫是一种可以进入大脑并造成损伤的原生动物寄生虫,与寄生虫衍生分子的毒性作用或对感染的免疫反应有关。其他具有脑嗜性的原生动物寄生虫包括弓形虫、疟原虫、阿米巴原虫,最终还有其他锥虫,如克氏t型虫和利什曼原虫。这些寄生虫共同影响着全世界数十亿人,每年造成50多万人死亡。决定脑向性的因素、侵袭机制以及脑内正在进行的过程尚不清楚。但是,它们取决于所涉及的寄生虫。由布氏体引起的发病始于局部的寄生虫接种区,很快锥虫就富含血液,疾病进入所谓的早期阶段。这一阶段的病理机制已经被描述,甚至用于对抗疾病的分子在这一时期也是有效的。后来,疾病发展到晚期,其特征是在中枢神经系统(CNS)中存在寄生虫,即所谓的脑膜脑病期。这一阶段的疾病尚未得到充分的检查,仍然是一个调查问题。在这里,我强调深入研究布鲁氏杆菌引起的神经发病机制的重要性,这将使识别可能靶向克服到达中枢神经系统的寄生虫的途径成为可能。最后,我强调了近几年在神经科学领域开发的工具的应用将对被忽视的热带病的研究产生的影响。
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引用次数: 4
Aeration mitigates endoplasmic reticulum stress in Saccharomyces cerevisiae even without mitochondrial respiration. 即使没有线粒体呼吸,曝气也能减轻酿酒酵母菌的内质网应激。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-03-31 DOI: 10.15698/mic2021.04.746
Huong Thi Phuong, Yuki Ishiwata-Kimata, Yuki Nishi, Norie Oguchi, Hiroshi Takagi, Yukio Kimata

Saccharomyces cerevisiae is a facultative anaerobic organism that grows well under both aerobic and hypoxic conditions in media containing abundant fermentable nutrients such as glucose. In order to deeply understand the physiological dependence of S. cerevisiae on aeration, we checked endoplasmic reticulum (ER)-stress status by monitoring the splicing of HAC1 mRNA, which is promoted by the ER stress-sensor protein, Ire1. HAC1-mRNA splicing that was caused by conventional ER-stressing agents, including low concentrations of dithiothreitol (DTT), was more potent in hypoxic cultures than in aerated cultures. Moreover, growth retardation was observed by adding low-dose DTT into hypoxic cultures of ire1Δ cells. Unexpectedly, aeration mitigated ER stress and DTT-induced impairment of ER oxidative protein folding even when mitochondrial respiration was halted by the ρo mutation. An ER-located protein Ero1 is known to directly consume molecular oxygen to initiate the ER protein oxidation cascade, which promotes oxidative protein folding of ER client proteins. Our further study using ero1-mutant strains suggested that, in addition to mitochondrial respiration, this Ero1-medaited reaction contributes to mitigation of ER stress by molecular oxygen. Taken together, here we demonstrate a scenario in which aeration acts beneficially on S. cerevisiae cells even under fermentative conditions.

酿酒酵母是兼性厌氧生物,在有氧和缺氧条件下都能很好地生长,培养基中含有丰富的可发酵营养物质,如葡萄糖。为了深入了解酿酒酵母对曝气的生理依赖性,我们通过监测内质网应激传感器蛋白Ire1促进HAC1 mRNA剪接来检测内质网应激状态。HAC1-mRNA剪接是由常规er胁迫剂(包括低浓度的二硫苏糖醇(DTT))引起的,在缺氧培养中比在曝气培养中更有效。此外,在缺氧培养的ire1Δ细胞中加入低剂量的DTT,观察到生长迟缓。出乎意料的是,即使线粒体呼吸因ρo突变而停止,通气也能减轻内质网应激和dtt诱导的内质网氧化蛋白折叠损伤。已知内质网定位蛋白Ero1直接消耗分子氧启动内质网蛋白氧化级联,从而促进内质网客户蛋白的氧化蛋白折叠。我们对ero1突变菌株的进一步研究表明,除了线粒体呼吸作用外,这种由ero1介导的反应还有助于缓解内质网应激。综上所述,我们在这里展示了一种情况,在这种情况下,即使在发酵条件下,曝气也对酿酒酵母细胞有益。
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引用次数: 1
Barcode sequencing and a high-throughput assay for chronological lifespan uncover ageing-associated genes in fission yeast 条形码测序和高通量测定时间顺序寿命揭示老化相关基因在裂变酵母
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-03-04 DOI: 10.1101/2021.03.04.433786
Catalina-Andreea Romila, StJohn Townsend, M. Malecki, S. Kamrad, María Rodríguez-López, Olivia Hillson, Cristina Cotobal, M. Ralser, J. Bähler
Ageing-related processes are largely conserved, with simple organisms remaining the main platform to discover and dissect new ageing-associated genes. Yeasts provide potent model systems to study cellular ageing owing their amenability to systematic functional assays under controlled conditions. Even with yeast cells, however, ageing assays can be laborious and resource-intensive. Here we present improved experimental and computational methods to study chronological lifespan in Schizosaccharomyces pombe. We decoded the barcodes for 3206 mutants of the latest gene-deletion library, enabling the parallel profiling of ∼700 additional mutants compared to previous screens. We then applied a refined method of barcode sequencing (Bar-seq), addressing technical and statistical issues raised by persisting DNA in dead cells and sampling bottlenecks in aged cultures, to screen for mutants showing altered lifespan during stationary phase. This screen identified 341 long-lived mutants and 1246 short-lived mutants which point to many previously unknown ageing-associated genes, including 51 conserved but entirely uncharacterized genes. The ageing-associated genes showed coherent enrichments in processes also associated with human ageing, particularly with respect to ageing in non-proliferative brain cells. We also developed an automated colony-forming unit assay for chronological lifespan to facilitate medium- to high-throughput ageing studies by saving time and resources compared to the traditional assay. Results from the Bar-seq screen showed good agreement with this new assay, validating 33 genes not previously associated with cellular ageing. This study provides an effective methodological platform and identifies many new ageing-associated genes as a framework for analysing cellular ageing in yeast and beyond.
与衰老相关的过程在很大程度上是保守的,简单的生物体仍然是发现和剖析新的衰老相关基因的主要平台。酵母为研究细胞衰老提供了强有力的模型系统,因为它们可以在受控条件下进行系统的功能测定。然而,即使使用酵母细胞,老化测定也可能是费力和资源密集的。在这里,我们提出了改进的实验和计算方法来研究pombe裂殖酵母的时间寿命。我们解码了最新基因缺失文库的3206个突变体的条形码,与之前的筛选相比,我们能够对大约700个额外的突变体进行平行分析。然后,我们应用了一种改进的条形码测序方法(Bar-seq),解决了死细胞中DNA的持续存在和老化培养物中的采样瓶颈所带来的技术和统计问题,以筛选在固定期寿命改变的突变体。该筛选鉴定了341个长寿突变体和1246个短命突变体,这些突变体指向许多以前未知的衰老相关基因,包括51个保守但完全不具特征的基因。衰老相关基因在与人类衰老相关的过程中表现出一致的富集,特别是在非增殖性脑细胞的衰老方面。我们还开发了一种按时间顺序使用寿命的自动集落形成单元测定法,通过与传统测定法相比节省时间和资源,促进中高通量老化研究。Bar-seq筛选的结果显示与这一新的测定结果非常一致,验证了33个以前与细胞衰老无关的基因。这项研究提供了一个有效的方法学平台,并确定了许多新的衰老相关基因,作为分析酵母及其他细胞衰老的框架。
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引用次数: 10
Lichens - growing greenhouses en miniature. 地衣——微型温室。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-03-01 DOI: 10.15698/mic2021.03.743
Martin Grube
Beards hanging from trees and colorful patches encrusting rocks are silent success stories of lichens, the fascinating life styles fungi can form with algae (Fig. 1). Lichens were show-cases to introduce the concept of symbiosis (as ‘Symbiotismus’ [1]). The self-support of symbiotic life styles is recognized as gear-shift of evolution and applied to a vast number of examples where continued interactions between species lead to metabolic or phenotypic novelty. Lichen symbioses are still outstanding for the structural longevity and occurrence in environments, some which are unsuitable for most other organisms. Lichens often form major components Arctic tundra, boreal forest floors, but also on lava fields, rock surfaces along coasts or in extremely high altitudes. The perseverance of lichens in such hostile places appears to be in striking contrast to observed ecological specialization and their lack in urban and trafficated places. The symbiosis is indeed very sensitive during physiologically active state but the puzzle of extremotolerance is solved when we consider poikilohydry: because lichens hardly possess structural or functional mechanisms to maintain and/or regulate water content, desiccation rapidly causes shut down of metabolism. Yet, in contrast to many other life forms, lichens cope extremely well with recurrent changes of water availability. Lichens have an outstanding ability to revitalize from dry stages. Lichens can endure extreme desiccation to water contents (below 0.1 g H2O g–1 dry weight (DW)), which causes ‘vitrification’, the transition of their cytoplasm to a ‘glassy’ state and cease of metabolism. To find out what reactions may occur at different levels of desiccation in lichens, Candotto Carniel et al. [2] used dynamic mechanical thermal analysis as for assessment of molecular mobility, while deand re-epoxidation of the xanthophyll cycle pigments served as a proxy to assess enzyme activity. At 20°C vitrification occurred between 0.12–0.08 g H2O g−1 DW and enzymes were active in a ‘rubbery’ state (0.17 g H2O g−1 DW) but not in a glassy state (0.03 g H2O g−1 DW). Therefore, desiccated tissues may appear to be ‘dry’ in the conventional sense, but subtle differences in water content will have substantial consequences on the types of (bio)chemical reactions that can occur, with downstream effects on longevity in the desiccated state. Lichen thalli must be flexible to retain shape integrity under poikilohydric conditions, which involve shrinking and swelling of the symbiotic structures. The photosynthetic partners in the majority of lichens, algae or cyanobacteria, are typically sheltered beneath coherent peripheral layers formed by fungal cells, which are tightly glued together in a common extracellular matrix by their gelatinizing outer cell walls. Spribille et al. [3] compiled current knowledge about the composition of involved polysaccharides and emphasized the important role of acidic polysaccharides in holding lichens toget
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引用次数: 2
When the pandemic opts for the lockdown: Secretion system evolution in the cholera bacterium. 当大流行选择封锁时:霍乱细菌分泌系统的进化。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-02-18 DOI: 10.15698/mic2021.03.744
Francis J Santoriello, Stefan Pukatzki

Vibrio cholerae, the causative agent of the diarrheal disease cholera, is a microbe capable of inhabiting two different ecosystems: chitinous surfaces in brackish, estuarine waters and the epithelial lining of the human gastrointestinal tract. V. cholerae defends against competitive microorganisms with a contact-dependent, contractile killing machine called the type VI secretion system (T6SS) in each of these niches. The T6SS resembles an inverted T4 bacteriophage tail and is used to deliver toxic effector proteins into neighboring cells. Pandemic strains of V. cholerae encode a unique set of T6SS effector proteins, which may play a role in pathogenesis or pandemic spread. In our recent study (Santoriello et al. (2020), Nat Commun, doi: 10.1038/s41467-020-20012-7), using genomic and molecular biology tools, we demonstrated that the T6SS island Auxiliary Cluster 3 (Aux3) is unique to pandemic strains of V. cholerae. We went on to show that Aux3 is related to a phage-like element circulating in environmental V. cholerae strains and that two genetic domestication events formed the pandemic Aux3 cluster during the evolution of the pandemic clone. Our findings support two main conclusions: (1) Aux3 evolution from phage-like element to T6SS cluster offers a snapshot of phage domestication in early T6SS evolution and (2) chromosomal maintenance of Aux3 was advantageous to the common ancestor of V. cholerae pandemic strains.

霍乱弧菌是腹泻病霍乱的病原体,是一种能够栖息于两种不同生态系统的微生物:咸淡水、河口水域的几丁质表面和人类胃肠道的上皮。霍乱弧菌在每个生态位中都有一种依赖于接触的、可收缩的杀戮机器,称为VI型分泌系统(T6SS),以抵御竞争微生物。T6SS类似于倒置的T4噬菌体尾巴,用于将毒性效应蛋白传递到邻近细胞中。霍乱弧菌大流行菌株编码一组独特的T6SS效应蛋白,该蛋白可能在发病或大流行传播中发挥作用。在我们最近的研究(Santoriello et al. (2020), Nat Commun, doi: 10.1038/s41467-020-20012-7)中,我们使用基因组和分子生物学工具证明了T6SS岛辅助簇3 (Aux3)是霍乱分枝杆菌大流行菌株所特有的。我们进一步证明,Aux3与环境霍乱弧菌菌株中循环的一种噬菌体样元素有关,并且在大流行克隆的进化过程中,两次遗传驯化事件形成了大流行Aux3集群。我们的研究结果支持两个主要结论:(1)Aux3从噬菌体样元素到T6SS簇的进化提供了早期T6SS进化中噬菌体驯化的简要描述;(2)Aux3的染色体维持有利于霍乱弧菌大流行菌株的共同祖先。
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引用次数: 3
Biofilms by bacterial human pathogens: Clinical relevance - development, composition and regulation - therapeutical strategies. 细菌性人类病原体的生物膜:临床意义--发展、组成和调节--治疗策略。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-02-01 DOI: 10.15698/mic2021.02.741
Adina Schulze, Fabian Mitterer, Joao P Pombo, Stefan Schild

Notably, bacterial biofilm formation is increasingly recognized as a passive virulence factor facilitating many infectious disease processes. In this review we will focus on bacterial biofilms formed by human pathogens and highlight their relevance for diverse diseases. Along biofilm composition and regulation emphasis is laid on the intensively studied biofilms of Vibrio cholerae, Pseudomonas aeruginosa and Staphylococcus spp., which are commonly used as biofilm model organisms and therefore contribute to our general understanding of bacterial biofilm (patho-)physiology. Finally, therapeutical intervention strategies targeting biofilms will be discussed.

值得注意的是,细菌生物膜的形成越来越被认为是促进许多传染病过程的被动毒力因素。在这篇综述中,我们将重点关注人类病原体形成的细菌生物膜,并强调它们与各种疾病的相关性。随着生物膜的组成和调节,重点将放在对霍乱弧菌、铜绿假单胞菌和葡萄球菌的生物膜的深入研究上,它们通常被用作生物膜模式生物,因此有助于我们对细菌生物膜(病理)生理学的总体了解。最后,将讨论针对生物膜的治疗干预策略。
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引用次数: 0
A novel BR-SMAD is required for larval development in barber's pole worm Haemonchus contortus. 一种新的BR-SMAD在弯血虫的幼虫发育中是必需的。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-23 DOI: 10.15698/mic2021.02.742
Fangfang Li, Peixi Qin, Lisha Ye, Nishith Gupta, Min Hu

SMAD proteins mediate TGF-β signaling and thereby regulate the metazoan development; however, they are poorly defined in Haemonchus contortus-a common blood-sucking parasitic nematode of small ruminants. Here, we characterized an R-SMAD family protein in H. contortus termed HcSMA2, which is closely related to Caenorhabditis elegans SMA2 (CeSMA2) involved in the bone morphogenetic protein (BMP) signaling. Hcsma2 is transcribed in all developmental stages of H. contortus but highly induced in the adult male worms. The RNA interference with Hcsma2 retarded the transition of infective L3 into L4 larvae. Besides, the bimolecular fluorescence complementation revealed the interaction of HcSMA2 with a TGF-β-activated-R-SMAD (HcDAF8). Together these results show a BMP-like receptor-regulated SMAD in H. contortus that is required for larval differentiation and underscore an adaptive functional repurposing of BMP-signaling in parasitic worms.

SMAD蛋白介导TGF-β信号传导,从而调控后生动物的发育;然而,它们在弯血线虫(一种常见的小反刍动物吸血寄生虫)中定义不清。在这里,我们鉴定了H. contortus中的R-SMAD家族蛋白HcSMA2,该蛋白与秀丽隐杆线虫SMA2 (CeSMA2)密切相关,参与骨形态发生蛋白(BMP)信号传导。Hcsma2在弯纹丝虫病的所有发育阶段都有转录,但在成年雄虫中高度诱导。RNA对Hcsma2的干扰延缓了感染的L3向L4幼虫的转变。此外,双分子荧光互补显示HcSMA2与TGF-β-激活的r - smad (HcDAF8)相互作用。综上所述,这些结果表明,弓形虫中有一个类似bmp的受体调节的SMAD,这是幼虫分化所必需的,并强调了寄生蠕虫中bmp信号的适应性功能重新定位。
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引用次数: 0
Maintaining phagosome integrity during fungal infection: do or die? 真菌感染期间维持吞噬体完整性:生存还是死亡?
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-12-03 DOI: 10.15698/mic2020.12.738
Mabel Yang, Glenn F W Walpole, Johannes Westman

Professional phagocytes represent a critical node in innate immunity and tissue homeostasis through their specialized ability to eat, drink, and digest material from the extracellular milieu. The degradative and microbicidal functions of phagocytes rely on the fusion of lysosomes with endosomal compartments such as phagosomes, resulting in the digestion and recycling of internalized prey and debris. Despite these efforts, several particularly dangerous infections result from a class of tenacious pathogens that resist digestion, often surviving and even proliferating within the confines of the phagosomal membrane. One such example, Candida albicans, is a commensal polymorphic fungus that colonizes ~50% of the population and can cause life-threatening infections in immunocompromised patients. Not only can C. albicans survive within phagosomes, but its ingestion by macropahges triggers a yeast-to-hyphal transition promoting rapid intraphagosomal growth (several microns per hour) while imposing a substantial mechanical burden on the phagosomal membrane surrounding the fungus. Preservation of membrane integrity is essential to maintain the hostile internal environment of the phagosome, a functionality of degradative enzymes and oxidative stress. Yet, biological membranes such as phagosomes have a limited capacity to stretch. Using C. albicans as a model intracellular pathogen, our recent work reveals a mechanism by which phagosomes respond to intraphagosomal growth of pathogens by expanding their surface area, and as a result, maintain the integrity of the phagosomal membrane. We hypothesized that this expansion would be facilitated by the delivery and fusion of membrane from extraneous sources with the phagosome. Consistently, macrophages respond to the yeast-to-hyphal transition through a stretch-induced release of phagosomal calcium, leading to recruitment and insertion of lysosomes that accommodate the expansion of the phagolysosome and preserve its integrity. Below, we discuss this calcium-dependent mechanism of lysosome insertion as a means of avoiding phagosomal rupture. Further, we examine the implications of membrane integrity on the delicate balance between the host and pathogen by focusing on fungal stress responses, nutrient acquisition, inflammasome activation, and cell death.

专业吞噬细胞通过其特殊的进食、饮水和消化细胞外环境物质的能力,代表了先天免疫和组织稳态的关键节点。吞噬细胞的降解和杀微生物功能依赖于溶酶体与吞噬体等内体腔室的融合,导致内化猎物和碎片的消化和再循环。尽管有这些努力,一些特别危险的感染是由一类顽强的病原体引起的,它们抵抗消化,通常在吞噬体膜的范围内存活甚至增殖。其中一个例子是白色念珠菌,它是一种共生多态真菌,在50%的人群中定植,可在免疫功能低下的患者中引起危及生命的感染。白色念珠菌不仅能在吞噬体内存活,而且被巨噬细胞吞噬后,会触发酵母到菌丝的转变,促进吞噬体内的快速生长(每小时几微米),同时对真菌周围的吞噬体膜造成巨大的机械负担。保存膜的完整性对于维持吞噬体的敌对内部环境,降解酶和氧化应激的功能至关重要。然而,生物膜如吞噬体的拉伸能力有限。利用白色念珠菌作为细胞内病原体的模型,我们最近的工作揭示了吞噬体通过扩大其表面积来响应吞噬体内病原体生长的机制,从而维持吞噬体膜的完整性。我们假设这种扩张可能是由外来来源的膜与吞噬体的传递和融合促进的。一致地,巨噬细胞通过拉伸诱导的吞噬体钙释放来响应酵母到菌丝的转变,导致溶酶体的招募和插入,以适应吞噬体的扩张并保持其完整性。下面,我们将讨论溶酶体插入作为避免吞噬体破裂手段的钙依赖机制。此外,我们通过关注真菌应激反应、营养获取、炎性体激活和细胞死亡来研究膜完整性对宿主和病原体之间微妙平衡的影响。
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引用次数: 2
Milestones in Bacillus subtilis sporulation research. 枯草芽孢杆菌孢子研究的里程碑。
IF 4.1 3区 生物学 Q2 CELL BIOLOGY Pub Date : 2020-11-27 DOI: 10.15698/mic2021.01.739
Eammon P Riley, Corinna Schwarz, Alan I Derman, Javier Lopez-Garrido

Endospore formation has been a rich field of research for more than a century, and has benefited from the powerful genetic tools available in Bacillus subtilis. In this review, we highlight foundational discoveries that shaped the sporulation field, from its origins to the present day, tracing a chronology that spans more than one hundred eighty years. We detail how cell-specific gene expression has been harnessed to investigate the existence and function of intercellular proteinaceous channels in sporulating cells, and we illustrate the rapid progress in our understanding of the cell biology of sporulation in recent years using the process of chromosome translocation as a storyline. Finally, we sketch general aspects of sporulation that remain largely unexplored, and that we envision will be fruitful areas of future research.

一个多世纪以来,内生孢子的形成一直是一个内容丰富的研究领域,枯草芽孢杆菌强大的遗传工具使这一研究领域受益匪浅。在这篇综述中,我们将重点介绍塑造孢子形成领域的基础性发现,从其起源到今天,时间跨度超过 180 年。我们详细介绍了如何利用细胞特异性基因表达来研究孢子细胞中细胞间蛋白质通道的存在和功能,并以染色体易位过程为故事情节,说明近年来我们对孢子细胞生物学的理解取得了快速进展。最后,我们简要介绍了孢子化的一般方面,这些方面在很大程度上仍未被探索,但我们认为它们将是未来研究的富有成效的领域。
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引用次数: 0
Nutrient sensing and cAMP signaling in yeast: G-protein coupled receptor versus transceptor activation of PKA. 酵母中的营养传感和 cAMP 信号:G 蛋白偶联受体与 PKA 的受体激活。
IF 4.6 3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2020-10-12 DOI: 10.15698/mic2021.01.740
Griet Van Zeebroeck, Liesbeth Demuyser, Zhiqiang Zhang, Ines Cottignie, Johan M Thevelein

A major signal transduction pathway regulating cell growth and many associated physiological properties as a function of nutrient availability in the yeast Saccharomyces cerevisiae is the protein kinase A (PKA) pathway. Glucose activation of PKA is mediated by G-protein coupled receptor (GPCR) Gpr1, and secondary messenger cAMP. Other nutrients, including nitrogen, phosphate and sulfate, activate PKA in accordingly-starved cells through nutrient transceptors, but apparently without cAMP signaling. We have now used an optimized EPAC-based fluorescence resonance energy transfer (FRET) sensor to precisely monitor in vivo cAMP levels after nutrient addition. We show that GPCR-mediated glucose activation of PKA is correlated with a rapid transient increase in the cAMP level in vivo, whereas nutrient transceptor-mediated activation by nitrogen, phosphate or sulfate, is not associated with any significant increase in cAMP in vivo. We also demonstrate direct physical interaction between the Gap1 amino acid transceptor and the catalytic subunits of PKA, Tpk1, 2 and 3. In addition, we reveal a conserved consensus motif in the nutrient transceptors that is also present in Bcy1, the regulatory subunit of PKA. This suggests that nutrient transceptor activation of PKA may be mediated by direct release of bound PKA catalytic subunits, triggered by the conformational changes occurring during transport of the substrate by the transceptor. Our results support a model in which nutrient transceptors are evolutionary ancestors of GPCRs, employing a more primitive direct signaling mechanism compared to the indirect cAMP second-messenger signaling mechanism used by GPCRs for activation of PKA.

蛋白激酶 A(PKA)途径是调节酵母菌细胞生长和许多相关生理特性的主要信号转导途径,是营养供应的函数。葡萄糖对 PKA 的激活是由 G 蛋白偶联受体(GPCR)Gpr1 和次级信使 cAMP 介导的。其他营养物质,包括氮、磷酸盐和硫酸盐,也会通过营养物质受体激活相应饥饿细胞中的 PKA,但显然没有 cAMP 信号传导。现在,我们使用优化的基于 EPAC 的荧光共振能量转移(FRET)传感器来精确监测添加营养物质后体内的 cAMP 水平。我们发现,GPCR 介导的葡萄糖激活 PKA 与体内 cAMP 水平的快速瞬时增加有关,而营养素受体介导的氮、磷酸盐或硫酸盐激活与体内 cAMP 的显著增加无关。我们还证明了 Gap1 氨基酸受体与 PKA 催化亚基 Tpk1、2 和 3 之间的直接物理相互作用。此外,我们还揭示了营养素受体中的一个保守共识基团,该基团也存在于 PKA 的调节亚基 Bcy1 中。这表明,营养素受体对 PKA 的激活可能是由结合的 PKA 催化亚基直接释放介导的,由受体转运底物过程中发生的构象变化触发。我们的研究结果支持这样一种模式,即营养素受体是 GPCR 的进化祖先,与 GPCR 用于激活 PKA 的间接 cAMP 第二信使信号机制相比,营养素受体采用了更原始的直接信号机制。
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Microbial Cell
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