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The Underlying Effect of Urate Levels on Female Infertility. 尿酸水平对女性不孕症的潜在影响。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.3390/metabo14100564
Muhammad Naveed, Jennifer W Hill

Female infertility is a complex and multifaceted condition that affects millions of women globally [...].

女性不孕症是一种复杂的、多方面的疾病,影响着全球数百万妇女[...]。
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引用次数: 0
Low Serum Fibroblast Growth Factor 21 Level and Its Altered Regulation by Thyroid Hormones in Patients with Hashimoto's Thyroiditis on Levothyroxine Substitution. 使用左甲状腺素替代品的桥本氏甲状腺炎患者血清成纤维细胞生长因子21水平偏低及其受甲状腺激素调节的改变
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-21 DOI: 10.3390/metabo14100565
Eszter Berta, Sándor Halmi, István Molnár, Dávid Hutkai, Sára Csiha, Harjit Pal Bhattoa, Hajnalka Lőrincz, Sándor Somodi, Mónika Katkó, Mariann Harangi, György Paragh, Endre V Nagy, Miklós Bodor

Background/objectives: Fibroblast growth factor 21 (FGF21) is a hormonal regulator of lipid and glucose metabolism exerting protection against atherosclerosis by multiple actions on the blood vessels, liver, and adipose tissues. We aimed to investigate serum FGF21 level and its relation to thyroid hormones and metabolic parameters among patients with Hashimoto's thyroiditis (HT).

Methods: Eighty patients with HT on levothyroxine treatment and eighty-two age- and BMI-matched adults without thyroid disease serving as controls were enrolled. Serum FGF21 concentrations were determined with an enzyme-linked immunosorbent assay.

Results: Median serum FGF21 level was significantly lower in HT patients compared with controls (74.2 (33.4-148.3) pg/mL vs. 131.9 (44.8-236.3) pg/mL; p = 0.03). We found a positive correlation between FGF21 and age, triglyceride, total cholesterol, and low-density lipoprotein cholesterol in both groups, while thyroid stimulating hormone and C-reactive protein showed a positive correlation, and thyroxine had an inverse correlation with FGF21 only in control subjects. According to multiple regression analyses, thyroid status is the main predictor of FGF21 in healthy controls, while it is not a significant predictor of FGF21 among HT patients on levothyroxine supplementation therapy.

Conclusions: Our results indicate that the physiological role of thyroid function in the regulation of FGF21 synthesis is impaired in HT patients, which may contribute to the metabolic alterations characteristic of HT patients.

背景/目的:成纤维细胞生长因子21(FGF21)是一种脂质和葡萄糖代谢的激素调节因子,通过对血管、肝脏和脂肪组织的多重作用来防止动脉粥样硬化。我们旨在研究桥本氏甲状腺炎(HT)患者的血清 FGF21 水平及其与甲状腺激素和代谢指标的关系:招募了80名接受左甲状腺素治疗的桥本氏甲状腺炎患者和82名年龄与体重指数相匹配的无甲状腺疾病成人作为对照组。用酶联免疫吸附试验测定血清中的 FGF21 浓度:结果:与对照组相比,高密度脂蛋白血症患者血清中位 FGF21 水平明显较低(74.2 (33.4-148.3) pg/mL vs. 131.9 (44.8-236.3) pg/mL;p = 0.03)。我们发现,在两组受试者中,FGF21 与年龄、甘油三酯、总胆固醇和低密度脂蛋白胆固醇呈正相关,而促甲状腺激素和 C 反应蛋白呈正相关,只有对照组受试者的甲状腺素与 FGF21 呈反相关。根据多元回归分析,在健康对照组中,甲状腺状态是预测FGF21的主要因素,而在接受左甲状腺素补充治疗的高血压患者中,甲状腺状态并不是预测FGF21的重要因素:我们的研究结果表明,甲状腺功能在 HT 患者中调节 FGF21 合成的生理作用受损,这可能是导致 HT 患者代谢改变的原因之一。
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引用次数: 0
Comparative Evaluation of the Chemical Components and Anti-Inflammatory Potential of Yellow- and Blue-Flowered Meconopsis Species: M. integrifolia and M. betonicifolia. 黄花和蓝花拟南芥化学成分和抗炎潜力的比较评价:M. integrifolia 和 M. betonicifolia。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-20 DOI: 10.3390/metabo14100563
Peizhao Cheng, Ruixi Gan, Cong Wang, Qian Xu, Kelsang Norbu, Feng Zhou, Sixin Kong, Zhuoma Jia, Dawa Jiabu, Xin Feng, Junsong Wang

Background/Objectives:Meconopsis has long been used in traditional Tibetan medicine to treat various inflammatory and pain-related conditions. However, blue-flowered Meconopsis (M. betonicifolia) is becoming increasingly scarce due to overharvesting. As a potential alternative, yellow-flowered Meconopsis (M. integrifolia) shows promise but requires comprehensive characterization. This study aimed to evaluate and compare the anti-inflammatory potential of yellow- and blue-flowered Meconopsis species. Methods: Liquid chromatography-mass spectrometry (LC-MS) techniques were used to analyze the chemical profiles of yellow- and blue-flowered Meconopsis. Putative targets of shared constituents were subjected to GO and disease enrichment analysis. The LPS-induced RAW264.7 macrophage model was employed to assess anti-inflammatory effects. Metabolomics was applied to gain mechanistic insights. Results: LC-MS revealed over 70% chemical similarity between species. Enrichment analysis associated targets with inflammation-related pathways. In macrophage assays, both species demonstrated dose-dependent antioxidative and anti-inflammatory activities, with yellow Meconopsis exhibiting superior efficacy. Metabolomics showed modulation of key inflammatory metabolic pathways. Conclusions: This integrative study validated yellow-flowered Meconopsis as a credible alternative to its blue-flowered counterpart for anti-inflammatory applications. Metabolic profiling provided initial clues regarding their multi-targeted modes of action, highlighting their potential for sustainable utilization and biodiversity conservation.

背景/目的:在传统藏医学中,拟南芥一直被用于治疗各种炎症和疼痛相关疾病。然而,由于过度采摘,蓝花拟南天(M. betonicifolia)越来越少。作为一种潜在的替代品,黄花麦冬(M. integrifolia)前景看好,但需要进行全面的特征描述。本研究旨在评估和比较黄花拟南芥和蓝花拟南芥的抗炎潜力。方法:液相色谱-质谱采用液相色谱-质谱(LC-MS)技术分析黄花和蓝花拟南芥的化学特征。对共有成分的推定靶标进行了 GO 和疾病富集分析。采用 LPS 诱导的 RAW264.7 巨噬细胞模型来评估抗炎效果。应用代谢组学深入了解其机理。结果LC-MS 发现物种间的化学相似性超过 70%。富集分析将目标与炎症相关途径联系起来。在巨噬细胞试验中,两种植物都表现出剂量依赖性的抗氧化和抗炎活性,其中黄刺玫表现出更强的功效。代谢组学显示,关键的炎症代谢途径受到了调节。结论:这项综合研究验证了黄花拟南芥在抗炎应用中是蓝花拟南芥的可靠替代品。代谢分析为其多靶点作用模式提供了初步线索,凸显了其在可持续利用和生物多样性保护方面的潜力。
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引用次数: 0
Research Progress on Antioxidant Peptides from Fish By-Products: Purification, Identification, and Structure-Activity Relationship. 从鱼类副产品中提取抗氧化肽的研究进展:纯化、鉴定和结构-活性关系。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-20 DOI: 10.3390/metabo14100561
Xinru Liu, Qiuyue Hu, Yafang Shen, Yuxin Wu, Lu Gao, Xuechao Xu, Guijie Hao

Background/Objectives: Excessive reactive oxygen species (ROS) can lead to oxidative stress, which has become an urgent problem requiring effective solutions. Due to the drawbacks of chemically synthesized antioxidants, there is a growing interest in natural antioxidants, particularly antioxidant peptides. Methods: By reviewing recent literature on antioxidant peptides, particularly those extracted from various parts of fish, summarize which fish by-products are more conducive to the extraction of antioxidant peptides and elaborate on their characteristics. Results: This article summarizes recent advancements in extracting antioxidant peptides from fish processing by-products, Briefly introduced the purification and identification process of antioxidant peptides, specifically focusing on the extraction of antioxidant peptides from various fish by-products. Additionally, this article comprehensively reviews the relationship between amino acid residues that compose antioxidant peptides and their potential mechanisms of action. It explores the impact of amino acid types, molecular weight, and structure-activity relationships on antioxidant efficacy. Conclusions: Different amino acid residues can contribute to the antioxidant activity of peptides by scavenging free radicals, chelating metal ions, and modulating enzyme activities. The smaller the molecular weight of the antioxidant peptide, the stronger its antioxidant activity. Additionally, the antioxidant activity of peptides is influenced by specific amino acids located at the C-terminus and N-terminus positions. Simultaneously, this review provides a more systematic analysis and a broader perspective based on existing research, concluded that fish viscera are more favorable for the extraction of antioxidant peptides, providing new insights for the practical application of fish by-products. This could increase the utilization of fish viscera and reduce the environmental pollution caused by their waste, offering valuable references for the study and application of antioxidant peptides from fish by-products.

背景/目的:过量的活性氧(ROS)会导致氧化应激,这已成为一个迫切需要有效解决的问题。由于化学合成抗氧化剂的缺点,人们越来越关注天然抗氧化剂,尤其是抗氧化肽。方法:通过回顾近年来有关抗氧化肽,特别是从鱼类不同部位提取的抗氧化肽的文献,总结哪些鱼类副产品更有利于提取抗氧化肽,并阐述其特点。结果:本文总结了近年来从水产品加工副产品中提取抗氧化肽的研究进展,简要介绍了抗氧化肽的纯化和鉴定过程,特别着重介绍了从各种水产品副产品中提取抗氧化肽的方法。此外,本文还全面回顾了组成抗氧化肽的氨基酸残基与其潜在作用机制之间的关系。文章探讨了氨基酸类型、分子量和结构-活性关系对抗氧化功效的影响。结论:不同的氨基酸残基可通过清除自由基、螯合金属离子和调节酶活性来促进肽的抗氧化活性。抗氧化肽的分子量越小,其抗氧化活性就越强。此外,肽的抗氧化活性还受到位于 C 端和 N 端位置的特定氨基酸的影响。同时,本综述在现有研究的基础上进行了更系统的分析,并从更广阔的角度得出结论,认为鱼内脏更有利于提取抗氧化肽,为鱼类副产品的实际应用提供了新的见解。这可以提高鱼类内脏的利用率,减少鱼类内脏废弃物对环境造成的污染,为鱼类副产品中抗氧化肽的研究和应用提供有价值的参考。
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引用次数: 0
Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers. 烟草物种中 17-羟基姜黄醛二萜苷的详细剖析揭示了共轭异构体的复杂反应网络。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-20 DOI: 10.3390/metabo14100562
Alina Ebert, Saleh Alseekh, Lucio D'Andrea, Ute Roessner, Ralph Bock, Joachim Kopka

Background: Specialised anti-herbivory metabolites are abundant in the solanaceous genus Nicotiana. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the Nicotiana genus, but information from the molecular model species N. tabacum, N. benthamiana, and the tree tobacco N. glauca is limited.

Objectives: We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.

Methods: We analysed polar metabolite extracts in comparison to the previously investigated wild reference species N. attenuata using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.

Results: We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in N. tabacum, N. glauca, and N. benthamiana to N. attenuata. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.

Conclusions: We extend the number of known HGL-DTGs with a focus on Nicotiana model species and demonstrate that the HGL-DTG family of N. tabacum plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild Nicotiana species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.

背景:茄属植物中含有大量专门的抗食草代谢物。这些代谢物包括庞大的 17-羟基香叶醇二萜糖苷(HGL-DTGs)家族。许多 HGL-DTGs 只出现在烟草属中,但来自分子模式物种 N. tabacum、N. benthamiana 和树烟草 N. glauca 的信息却很有限:我们研究了这些物种中 HGL-DTG 的出现和复杂性,旨在提供深入的参考注释和全面的 HGL-DTG 目录:我们使用正ESI(+)和负ESI(-)模式电喷雾离子化LC-MS和MS/MS分析了极性代谢物提取物,并与之前研究的野生参考物种N. attenuata进行了比较:结果:我们提供了 66 种 HGL-DTGs 的注释,并提供了部分 HGL-DTGs 的源内和 MS/MS 片段谱图,以及对 ESI(+) 和研究较少的 ESI(-) 谱图的示例性片段解释。我们将 HGL-DTGs 在 N. tabacum、N. glauca 和 N. benthamiana 与 N. attenuata 中的存在情况进行比较,总结出一条潜在的生物合成途径。约有三分之一的 HGL-DTGs 是色谱分析出的己糖、脱氧己糖或丙二酸共轭物的异构体。对于脱氧己糖分子数较少的共轭物,异构体的数量尤其多:我们以烟草模式物种为重点,扩展了已知 HGL-DTG 的数量,并证明烟草植物的 HGL-DTG 家族可能出奇地复杂。我们的研究提供了一个更好的基础,详细参考了以前对野生烟草物种的研究,并能推断出 HGL-DTG 途径,以及生物合成这一重要的专门防御代谢物家族所需的酶。
{"title":"Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from <i>Nicotiana</i> Species Reveals Complex Reaction Networks of Conjugation Isomers.","authors":"Alina Ebert, Saleh Alseekh, Lucio D'Andrea, Ute Roessner, Ralph Bock, Joachim Kopka","doi":"10.3390/metabo14100562","DOIUrl":"https://doi.org/10.3390/metabo14100562","url":null,"abstract":"<p><strong>Background: </strong>Specialised anti-herbivory metabolites are abundant in the solanaceous genus <i>Nicotiana</i>. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the <i>Nicotiana</i> genus, but information from the molecular model species <i>N. tabacum</i>, <i>N. benthamiana</i>, and the tree tobacco <i>N. glauca</i> is limited.</p><p><strong>Objectives: </strong>We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.</p><p><strong>Methods: </strong>We analysed polar metabolite extracts in comparison to the previously investigated wild reference species <i>N. attenuata</i> using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.</p><p><strong>Results: </strong>We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in <i>N. tabacum</i>, <i>N. glauca</i>, and <i>N. benthamiana</i> to <i>N. attenuata</i>. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.</p><p><strong>Conclusions: </strong>We extend the number of known HGL-DTGs with a focus on <i>Nicotiana</i> model species and demonstrate that the HGL-DTG family of <i>N. tabacum</i> plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild <i>Nicotiana</i> species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.</p>","PeriodicalId":18496,"journal":{"name":"Metabolites","volume":"14 10","pages":""},"PeriodicalIF":3.4,"publicationDate":"2024-10-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11509208/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142503598","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the Impact of Catechins on Bone Metabolism: A Comprehensive Review of Current Research and Future Directions. 探索儿茶素对骨代谢的影响:儿茶素对骨代谢影响的探索:当前研究与未来方向的全面回顾》。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-18 DOI: 10.3390/metabo14100560
Iris Jasmin Santos German, Sandra Maria Barbalho, Jesus Carlos Andreo, Tereza Lais Menegucci Zutin, Lucas Fornari Laurindo, Victória Dogani Rodrigues, Adriano Cressoni Araújo, Elen Landgraf Guiguer, Rosa Direito, Karina Torres Pomini, André Luis Shinohara

Background/Objectives: Degenerative musculoskeletal diseases represent a global health problem due to the progressive deterioration of affected individuals. As a bioactive compound, catechins have shown osteoprotective properties by stimulating osteoblastic cells and inhibiting bone resorption. Thus, this review aimed to address the mechanism of action of catechins on bone tissue. Methods: The search was applied to PubMed without limitations in date, language, or article type. Fifteen articles matched the topic and objective of this review. Results: EGCG (epigallocatechin gallate) and epicatechin demonstrated action on the osteogenic markers RANKL, TRAP, and NF-κβ and expression of BMPs and ALP, thus improving the bone microarchitecture. Studies on animals showed the action of EGCG in increasing calcium and osteoprotegerin levels, in addition to regulating the transcription factor NF-ATc1 associated with osteoclastogenesis. However, it did not show any effect on osteocalcin and RANK. Regarding human studies, EGCG reduced the risk of fracture in a dose-dependent manner. In periodontal tissue, EGCG reduced IL-6, TNF, and RANKL in vitro and in vivo. Human studies showed a reduction in periodontal pockets, gingival index, and clinical attachment level. The action of EGCG on membranes and hydrogels showed biocompatible and osteoinductive properties on the microenvironment of bone tissue by stimulating the expression of osteogenic growth factors and increasing osteocalcin and alkaline phosphate levels, thus promoting new bone formation. Conclusions: EGCG stimulates cytokines related to osteogenes, increasing bone mineral density, reducing osteoclastogenesis factors, and showing great potential as a therapeutic strategy for reducing the risk of bone fractures.

背景/目标:退行性肌肉骨骼疾病是一个全球性的健康问题,患者的病情会逐渐恶化。作为一种生物活性化合物,儿茶素具有刺激成骨细胞和抑制骨吸收的骨保护特性。因此,本综述旨在探讨儿茶素对骨组织的作用机制。研究方法在 PubMed 上进行搜索,不限制日期、语言或文章类型。有 15 篇文章符合本综述的主题和目的。结果:EGCGEGCG(表没食子儿茶素没食子酸酯)和表儿茶素对成骨标志物 RANKL、TRAP 和 NF-κβ 以及 BMPs 和 ALP 的表达有作用,从而改善了骨的微观结构。对动物的研究表明,除了调节与破骨细胞生成有关的转录因子 NF-ATc1 外,EGCG 还能提高钙和骨保护素的水平。不过,它对骨钙素和 RANK 没有任何影响。在人体研究方面,EGCG以剂量依赖的方式降低了骨折风险。在牙周组织中,EGCG 可在体外和体内减少 IL-6、TNF 和 RANKL。人体研究表明,EGCG 可减少牙周袋、牙龈指数和临床附着水平。EGCG 对膜和水凝胶的作用显示出生物相容性和骨诱导特性,可刺激成骨生长因子的表达,提高骨钙素和碱性磷酸水平,从而促进新骨的形成。结论EGCG 可刺激与成骨细胞有关的细胞因子,增加骨矿物质密度,减少破骨细胞生成因子,在降低骨折风险的治疗策略方面具有巨大潜力。
{"title":"Exploring the Impact of Catechins on Bone Metabolism: A Comprehensive Review of Current Research and Future Directions.","authors":"Iris Jasmin Santos German, Sandra Maria Barbalho, Jesus Carlos Andreo, Tereza Lais Menegucci Zutin, Lucas Fornari Laurindo, Victória Dogani Rodrigues, Adriano Cressoni Araújo, Elen Landgraf Guiguer, Rosa Direito, Karina Torres Pomini, André Luis Shinohara","doi":"10.3390/metabo14100560","DOIUrl":"https://doi.org/10.3390/metabo14100560","url":null,"abstract":"<p><p><b>Background/Objectives:</b> Degenerative musculoskeletal diseases represent a global health problem due to the progressive deterioration of affected individuals. As a bioactive compound, catechins have shown osteoprotective properties by stimulating osteoblastic cells and inhibiting bone resorption. Thus, this review aimed to address the mechanism of action of catechins on bone tissue. <b>Methods:</b> The search was applied to PubMed without limitations in date, language, or article type. Fifteen articles matched the topic and objective of this review. <b>Results:</b> EGCG (epigallocatechin gallate) and epicatechin demonstrated action on the osteogenic markers RANKL, TRAP, and NF-κβ and expression of BMPs and ALP, thus improving the bone microarchitecture. Studies on animals showed the action of EGCG in increasing calcium and osteoprotegerin levels, in addition to regulating the transcription factor NF-ATc1 associated with osteoclastogenesis. However, it did not show any effect on osteocalcin and RANK. Regarding human studies, EGCG reduced the risk of fracture in a dose-dependent manner. In periodontal tissue, EGCG reduced IL-6, TNF, and RANKL in vitro and in vivo. Human studies showed a reduction in periodontal pockets, gingival index, and clinical attachment level. The action of EGCG on membranes and hydrogels showed biocompatible and osteoinductive properties on the microenvironment of bone tissue by stimulating the expression of osteogenic growth factors and increasing osteocalcin and alkaline phosphate levels, thus promoting new bone formation. <b>Conclusions:</b> EGCG stimulates cytokines related to osteogenes, increasing bone mineral density, reducing osteoclastogenesis factors, and showing great potential as a therapeutic strategy for reducing the risk of bone fractures.</p>","PeriodicalId":18496,"journal":{"name":"Metabolites","volume":"14 10","pages":""},"PeriodicalIF":3.4,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11509841/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142503606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Causal Metabolomic and Lipidomic Analysis of Circulating Plasma Metabolites in Autism: A Comprehensive Mendelian Randomization Study with Independent Cohort Validation. 自闭症患者循环血浆代谢物的因果代谢组学和脂质组学分析:一项具有独立队列验证的孟德尔随机综合研究
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-17 DOI: 10.3390/metabo14100557
Zhifan Li, Yanrong Li, Xinrong Tang, Abao Xing, Jianlin Lin, Junrong Li, Junjun Ji, Tiantian Cai, Ke Zheng, Sai Sachin Lingampelly, Kefeng Li

Background: The increasing prevalence of autism spectrum disorder (ASD) highlights the need for objective diagnostic markers and a better understanding of its pathogenesis. Metabolic differences have been observed between individuals with and without ASD, but their causal relevance remains unclear.

Methods: Bidirectional two-sample Mendelian randomization (MR) was used to assess causal associations between circulating plasma metabolites and ASD using large-scale genome-wide association study (GWAS) datasets-comprising 1091 metabolites, 309 ratios, and 179 lipids-and three European autism datasets (PGC 2015: n = 10,610 and 10,263; 2017: n = 46,351). Inverse-variance weighted (IVW) and weighted median methods were employed, along with robust sensitivity and power analyses followed by independent cohort validation.

Results: Higher genetically predicted levels of sphingomyelin (SM) (d17:1/16:0) (OR, 1.129; 95% CI, 1.024-1.245; p = 0.015) were causally linked to increased ASD risk. Additionally, ASD children had higher plasma creatine/carnitine ratios. These MR findings were validated in an independent US autism cohort using machine learning analysis.

Conclusion: Utilizing large datasets, two MR approaches, robust sensitivity analyses, and independent validation, our novel findings provide evidence for the potential roles of metabolomics and circulating metabolites in ASD diagnosis and etiology.

背景:自闭症谱系障碍(ASD)的发病率越来越高,这凸显了客观诊断标记和更好地了解其发病机制的必要性。已观察到自闭症谱系障碍患者与非自闭症谱系障碍患者之间存在代谢差异,但其因果关系仍不清楚:利用大规模全基因组关联研究(GWAS)数据集--包括1091种代谢物、309种比率和179种脂类--以及三个欧洲自闭症数据集(PGC 2015:n = 10,610 和 10,263; 2017:n = 46,351),采用双向双样本孟德尔随机化(MR)评估循环血浆代谢物与ASD之间的因果关系。研究采用了逆方差加权(IVW)和加权中位数方法,并进行了稳健的敏感性和功率分析,然后进行了独立队列验证:较高的鞘磷脂(SM)(d17:1/16:0)基因预测水平(OR,1.129;95% CI,1.024-1.245;p = 0.015)与ASD风险增加存在因果关系。此外,ASD 儿童的血浆肌酸/肉碱比率较高。利用机器学习分析,这些MR发现在一个独立的美国自闭症队列中得到了验证:利用大型数据集、两种 MR 方法、稳健的敏感性分析和独立验证,我们的新发现为代谢组学和循环代谢物在 ASD 诊断和病因学中的潜在作用提供了证据。
{"title":"Causal Metabolomic and Lipidomic Analysis of Circulating Plasma Metabolites in Autism: A Comprehensive Mendelian Randomization Study with Independent Cohort Validation.","authors":"Zhifan Li, Yanrong Li, Xinrong Tang, Abao Xing, Jianlin Lin, Junrong Li, Junjun Ji, Tiantian Cai, Ke Zheng, Sai Sachin Lingampelly, Kefeng Li","doi":"10.3390/metabo14100557","DOIUrl":"https://doi.org/10.3390/metabo14100557","url":null,"abstract":"<p><strong>Background: </strong>The increasing prevalence of autism spectrum disorder (ASD) highlights the need for objective diagnostic markers and a better understanding of its pathogenesis. Metabolic differences have been observed between individuals with and without ASD, but their causal relevance remains unclear.</p><p><strong>Methods: </strong>Bidirectional two-sample Mendelian randomization (MR) was used to assess causal associations between circulating plasma metabolites and ASD using large-scale genome-wide association study (GWAS) datasets-comprising 1091 metabolites, 309 ratios, and 179 lipids-and three European autism datasets (PGC 2015: <i>n</i> = 10,610 and 10,263; 2017: <i>n</i> = 46,351). Inverse-variance weighted (IVW) and weighted median methods were employed, along with robust sensitivity and power analyses followed by independent cohort validation.</p><p><strong>Results: </strong>Higher genetically predicted levels of sphingomyelin (SM) (d17:1/16:0) (OR, 1.129; 95% CI, 1.024-1.245; <i>p</i> = 0.015) were causally linked to increased ASD risk. Additionally, ASD children had higher plasma creatine/carnitine ratios. These MR findings were validated in an independent US autism cohort using machine learning analysis.</p><p><strong>Conclusion: </strong>Utilizing large datasets, two MR approaches, robust sensitivity analyses, and independent validation, our novel findings provide evidence for the potential roles of metabolomics and circulating metabolites in ASD diagnosis and etiology.</p>","PeriodicalId":18496,"journal":{"name":"Metabolites","volume":"14 10","pages":""},"PeriodicalIF":3.4,"publicationDate":"2024-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11509474/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142503594","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of Mixtures of Emerging Pollutants and Drugs on Modulation of Biomarkers Related to Toxicity, Oxidative Stress, and Cancer. 新兴污染物和药物混合物对毒性、氧化应激和癌症相关生物标志物调节的影响
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-17 DOI: 10.3390/metabo14100559
Simona Manuguerra, Fabrizia Carli, Egeria Scoditti, Andrea Santulli, Amalia Gastaldelli, Concetta Maria Messina

Background/Objectives: Over time, the scientific community has developed a growing interest in the effects of mixtures of different compounds, for which there is currently no established evidence or knowledge, in relation to certain categories of xenobiotics. It is well known that exposure to pollutants causes oxidative stress, resulting in the overproduction of reactive oxygen species (ROS), which can affect signaling pathways that regulate the cell cycle, apoptosis, energy balance, and cellular metabolism. The aim of this study was to investigate the effects of sub-lethal concentrations of mixtures of emerging pollutants and pharmaceuticals on the modulation of biomarkers related to toxicity, oxidative stress, and cancer. Methods: In this study, the hepatoma cell line HepG2 was exposed to increasing concentrations of polybrominated diphenyl ether 47 (BDE-47), cadmium chloride (CdCl2), and carbamazepine (CBZ), both individually and in mixtures, for 72 h to assess cytotoxicity using the MTT assay. The subsequent step, following the identification of the sub-lethal concentration, was to investigate the effects of exposure at the gene expression level, through the evaluation of molecular markers related to cell cycle and apoptosis (p53), oxidative stress (NRF2), conjugation and detoxification of xenobiotics (CYP2C9 and GST), DNA damage (RAD51 and γH2AFX), and SUMOylation processes (SUMO1 and UBC9) in order to identify any potential alterations in pathways that are normally activated at the cellular level. Results: The results showed that contaminants tend to affect the enzymatic detoxification and antioxidant system, influencing DNA repair defense mechanisms involved in resistance to oxidative stress. The combined effect of the compounds at sub-lethal doses results in a greater activation of these pathways compared to exposure to each compound alone, thereby exacerbating their cytotoxicity. Conclusions: The biomarkers analyzed could contribute to the definition of early warning markers useful for environmental monitoring, while simultaneously providing insight into the toxicity and hazard levels of these substances in the environment and associated health risks.

背景/目标:随着时间的推移,科学界对不同化合物混合物的影响产生了越来越浓厚的兴趣。众所周知,接触污染物会造成氧化应激,导致活性氧(ROS)过度产生,从而影响调节细胞周期、细胞凋亡、能量平衡和细胞新陈代谢的信号通路。本研究旨在探讨亚致死浓度的新兴污染物和药物混合物对毒性、氧化应激和癌症相关生物标志物的调节作用。研究方法在这项研究中,肝癌细胞株 HepG2 单独或混合暴露于浓度不断增加的多溴联苯醚 47(BDE-47)、氯化镉(CdCl2)和卡马西平(CBZ)72 小时,用 MTT 法评估细胞毒性。在确定亚致死浓度后,接下来的步骤是通过评估与细胞周期和细胞凋亡(p53)、氧化应激(NRF2)有关的分子标记,研究暴露在基因表达水平上的影响、异种生物的共轭和解毒(CYP2C9 和 GST)、DNA 损伤(RAD51 和 γH2AFX)和 SUMOylation 过程(SUMO1 和 UBC9)相关的分子标记,以确定细胞水平上正常激活的通路中是否存在任何潜在的变化。结果显示结果表明,污染物往往会影响酶解毒和抗氧化系统,影响 DNA 修复防御机制,从而影响对氧化应激的抵抗能力。与单独接触每种化合物相比,亚致死剂量化合物的综合效应会导致这些途径被更大程度地激活,从而加剧其细胞毒性。结论所分析的生物标志物有助于确定对环境监测有用的预警标志物,同时还能让人们深入了解这些物质在环境中的毒性和危害程度以及相关的健康风险。
{"title":"Effects of Mixtures of Emerging Pollutants and Drugs on Modulation of Biomarkers Related to Toxicity, Oxidative Stress, and Cancer.","authors":"Simona Manuguerra, Fabrizia Carli, Egeria Scoditti, Andrea Santulli, Amalia Gastaldelli, Concetta Maria Messina","doi":"10.3390/metabo14100559","DOIUrl":"https://doi.org/10.3390/metabo14100559","url":null,"abstract":"<p><p><b>Background/Objectives:</b> Over time, the scientific community has developed a growing interest in the effects of mixtures of different compounds, for which there is currently no established evidence or knowledge, in relation to certain categories of xenobiotics. It is well known that exposure to pollutants causes oxidative stress, resulting in the overproduction of reactive oxygen species (ROS), which can affect signaling pathways that regulate the cell cycle, apoptosis, energy balance, and cellular metabolism. The aim of this study was to investigate the effects of sub-lethal concentrations of mixtures of emerging pollutants and pharmaceuticals on the modulation of biomarkers related to toxicity, oxidative stress, and cancer. <b>Methods:</b> In this study, the hepatoma cell line HepG2 was exposed to increasing concentrations of polybrominated diphenyl ether 47 (BDE-47), cadmium chloride (CdCl<sub>2</sub>), and carbamazepine (CBZ), both individually and in mixtures, for 72 h to assess cytotoxicity using the MTT assay. The subsequent step, following the identification of the sub-lethal concentration, was to investigate the effects of exposure at the gene expression level, through the evaluation of molecular markers related to cell cycle and apoptosis (<i>p53</i>), oxidative stress (<i>NRF2</i>), conjugation and detoxification of xenobiotics (<i>CYP2C9</i> and <i>GST</i>), DNA damage (<i>RAD51</i> and <i>γH2AFX</i>), and SUMOylation processes (<i>SUMO1</i> and <i>UBC9</i>) in order to identify any potential alterations in pathways that are normally activated at the cellular level. <b>Results:</b> The results showed that contaminants tend to affect the enzymatic detoxification and antioxidant system, influencing DNA repair defense mechanisms involved in resistance to oxidative stress. The combined effect of the compounds at sub-lethal doses results in a greater activation of these pathways compared to exposure to each compound alone, thereby exacerbating their cytotoxicity. <b>Conclusions:</b> The biomarkers analyzed could contribute to the definition of early warning markers useful for environmental monitoring, while simultaneously providing insight into the toxicity and hazard levels of these substances in the environment and associated health risks.</p>","PeriodicalId":18496,"journal":{"name":"Metabolites","volume":"14 10","pages":""},"PeriodicalIF":3.4,"publicationDate":"2024-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11509268/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142503603","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling the Metabolic Trajectory of Pig Feces Across Different Ages and Senescence. 揭示猪粪便在不同年龄和衰老期的代谢轨迹
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-17 DOI: 10.3390/metabo14100558
Chuanmin Qiao, Chengzhong Liu, Ruipei Ding, Shumei Wang, Maozhang He

Porcine models are increasingly recognized for their similarities to humans and have been utilized in disease modeling and organ grafting research. While extensive metabolomics studies have been conducted in swine, primarily focusing on conventional cohorts or specific animal models, the composition and functions of fecal metabolites in pigs across different age groups-particularly in the elderly-remain inadequately understood. In this study, an untargeted metabolomics approach was employed to analyze the fecal metabolomes of pigs at three distinct age stages: young (one year), middle-aged (four years), and elderly (eight years). The objective was to elucidate age-associated changes in metabolite composition and functionality under standardized rearing conditions. The untargeted metabolomic analysis revealed a diverse array of age-related metabolites. Notably, L-methionine sulfoxide levels were found to increase with age, whereas cytidine-5-monophosphate levels exhibited a gradual decline throughout the aging process. These metabolites demonstrated alterations across various biological pathways, including energy metabolism, pyrimidine metabolism, lipid metabolism, and amino acid metabolism. Collectively, the identified key metabolites, such as L-methionine sulfoxide and Cholecalciferol, may serve as potential biomarkers of senescence, providing valuable insights into the mechanistic understanding of aging in pigs.

猪模型因其与人类的相似性而被越来越多的人所认识,并被用于疾病建模和器官移植研究。虽然已经对猪进行了广泛的代谢组学研究,主要集中在传统的群组或特定的动物模型上,但对不同年龄组猪(尤其是老年人)粪便代谢物的组成和功能仍然了解不足。本研究采用非靶向代谢组学方法分析了三个不同年龄阶段猪的粪便代谢组:幼年(1 岁)、中年(4 岁)和老年(8 岁)。目的是阐明在标准化饲养条件下,与年龄相关的代谢物组成和功能变化。非靶向代谢组分析揭示了一系列与年龄相关的代谢物。值得注意的是,L-蛋氨酸亚砜的含量随着年龄的增长而增加,而胞苷-5-单磷酸的含量则在整个衰老过程中逐渐下降。这些代谢物在不同的生物途径中都发生了变化,包括能量代谢、嘧啶代谢、脂质代谢和氨基酸代谢。总体而言,所发现的关键代谢物(如 L-蛋氨酸亚砜和胆钙化醇)可作为衰老的潜在生物标志物,为从机理上理解猪的衰老提供宝贵的见解。
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引用次数: 0
Rats Exposed to Excess Sucrose During a Critical Period Develop Inflammation and Express a Secretory Phenotype of Vascular Smooth Muscle Cells. 在关键时期暴露于过量蔗糖的大鼠会出现炎症并表达血管平滑肌细胞的分泌型。
IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-17 DOI: 10.3390/metabo14100555
Verónica Guarner-Lans, Elizabeth Soria-Castro, Agustina Cano-Martínez, María Esther Rubio-Ruiz, Gabriela Zarco, Elizabeth Carreón-Torres, Oscar Grimaldo, Vicente Castrejón-Téllez, Israel Pérez-Torres

Background: Neonatal rats that receive sucrose during a critical postnatal period (CP, days 12 to 28) develop hypertension by the time they reach adulthood. Inflammation might contribute to changes during this period and could be associated with variations in the vascular smooth muscle (VSMC) phenotype.

Objective: We studied changes in inflammatory pathways that could underlie the expression of the secretory phenotype in the VSMC in the thoracic aorta of rats that received sucrose during CP.

Methods: We analyzed histological changes in the aorta and the expression of the COX-2, TLR4, iNOS, eNOS, MMP-2 and -9, and β- and α-actin, the quantities of TNF-α, IL-6, and IL-1β using ELISA, and the levels of fatty acids using gas chromatography.

Results: The aortic wall presented disorganization, decellularization, and wavy elastic fibers and an increase in the lumen area. The α- and β-actin expressions were decreased, while COX-2, TLR4, TNF-α, and the activity of IL-6 were increased. Oleic acid was increased in CP in comparison to the control group.

Conclusions: There is transient hypertension at the end of the CP that is accompanied by inflammation and a change in the phenotype of VSMC to the secretory phenotype. The inflammatory changes could act as epigenetic signals to determine the development of hypertension when animals reach adulthood.

背景:在出生后的关键时期(CP,第 12 至 28 天)接受蔗糖的新生大鼠在成年后会患高血压。炎症可能会导致这一时期的变化,并可能与血管平滑肌(VSMC)表型的变化有关:我们研究了炎症通路的变化,这些变化可能是CP期间摄入蔗糖的大鼠胸主动脉血管平滑肌(VSMC)分泌表型表达的基础:我们分析了大鼠主动脉的组织学变化以及 COX-2、TLR4、iNOS、eNOS、MMP-2 和 -9、β- 和 α-肌动蛋白的表达,使用 ELISA 分析了 TNF-α、IL-6 和 IL-1β 的含量,使用气相色谱分析了脂肪酸的含量:结果:主动脉壁出现紊乱、脱细胞和波浪状弹性纤维,管腔面积增大。α-和β-肌动蛋白的表达减少,而COX-2、TLR4、TNF-α和IL-6的活性增加。与对照组相比,CP 组油酸增加:结论:CP 结束时会出现一过性高血压,伴随着炎症和 VSMC 表型向分泌表型的转变。炎症变化可作为表观遗传学信号,决定动物成年后高血压的发展。
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引用次数: 0
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