Pub Date : 2026-01-14DOI: 10.3390/microorganisms14010186
Ye-Ji Kim, Dong-Wan Kim, Mi-Kyeong Ko, Donghyeon Kim, Seo-Yong Lee, Yerin Kim, Yeonrea Chae, Tae-Jun Kim, Hyejin Kim, Min Ja Lee, Sung-Han Park, Jaejo Kim, Jong-Hyeon Park, Ji-Hyeon Hwang, Yoon-Hee Lee
The world is divided into seven regional pools based on the serotype distribution and geographical spread of the foot-and-mouth disease (FMD) virus. The Republic of Korea (ROK) belongs to Pool 1, where serotypes O, A, and Asia1 are endemic. Recently, the risk of incursions by the O/CATHAY topotype has increased in Pool 1, raising concerns about its potential introduction into the ROK. To assess the protective effectiveness of three commercial FMD vaccine strains-O1/Manisa + O/3039, O/Primorsky, and O1/Campos-currently used in the ROK against this topotype, an animal challenge experiment was conducted. Three treatment groups (n = 4 in each) of pigs received a single 2 mL injection of one of the vaccines at 8-10 weeks of age, and the other group (n = 2) served as the control. All pigs were challenged with the O/HKN/5/2019 virus (O/CATHAY topotype) at 21 days post-vaccination. All vaccines conferred protective effects, with O1/Campos demonstrating the highest efficacy by inducing fewest clinical signs and significantly reducing virus shedding in the treated groups compared with those in the control group. These findings suggest O1/Campos may serve as an emergency measure; nevertheless, the development of a vaccine specifically targeting the O/CATHAY topotype is warranted.
{"title":"Evaluation of the Protective Efficacy of Foot-and-Mouth Disease Vaccines Against O/CATHAY Topotype Virus in Pigs.","authors":"Ye-Ji Kim, Dong-Wan Kim, Mi-Kyeong Ko, Donghyeon Kim, Seo-Yong Lee, Yerin Kim, Yeonrea Chae, Tae-Jun Kim, Hyejin Kim, Min Ja Lee, Sung-Han Park, Jaejo Kim, Jong-Hyeon Park, Ji-Hyeon Hwang, Yoon-Hee Lee","doi":"10.3390/microorganisms14010186","DOIUrl":"10.3390/microorganisms14010186","url":null,"abstract":"<p><p>The world is divided into seven regional pools based on the serotype distribution and geographical spread of the foot-and-mouth disease (FMD) virus. The Republic of Korea (ROK) belongs to Pool 1, where serotypes O, A, and Asia1 are endemic. Recently, the risk of incursions by the O/CATHAY topotype has increased in Pool 1, raising concerns about its potential introduction into the ROK. To assess the protective effectiveness of three commercial FMD vaccine strains-O1/Manisa + O/3039, O/Primorsky, and O1/Campos-currently used in the ROK against this topotype, an animal challenge experiment was conducted. Three treatment groups (<i>n</i> = 4 in each) of pigs received a single 2 mL injection of one of the vaccines at 8-10 weeks of age, and the other group (<i>n</i> = 2) served as the control. All pigs were challenged with the O/HKN/5/2019 virus (O/CATHAY topotype) at 21 days post-vaccination. All vaccines conferred protective effects, with O1/Campos demonstrating the highest efficacy by inducing fewest clinical signs and significantly reducing virus shedding in the treated groups compared with those in the control group. These findings suggest O1/Campos may serve as an emergency measure; nevertheless, the development of a vaccine specifically targeting the O/CATHAY topotype is warranted.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844367/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065018","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Clostridium perfringens is one of the main causes of death in poultry with no vaccines approved for poultry at present. The appropriate adjuvant is critical for the development of vaccines in C. perfringens in poultry. Here, we utilized Levilactobacillus brevis for high-yielding selenium biotransformation and demonstrated that heat-inactivated nano-selenium Lactobacillus (HiSeL) is a safe, efficient, and chemically stable selenium immunopotentiator for C. perfringens vaccines. We evaluated the effectiveness of HiSeL as an immune adjuvant to modulate the efficacy of multi-epitope vaccine in mice. Subcutaneous immunization mice with HiSeL promoted high levels of specific IgG, modulated cytokine secretion, downregulated stress-related gene expression, and provided 100% protection against lethal challenge with C. perfringens. Surprisingly, we found that HiSeL can quickly and effectively induce SIgA production even by subcutaneous immunization. Transcriptome sequencing revealed the pivotal role of TGF-β and NF-κB signaling pathways in IgA immune responses in mice immunized with the HiSeL-adjuvanted multi-epitope vaccine. Collectively, our study provides proof-of-concept evidence that HiSeL functions as a potent adjuvant candidate for the multi-epitope vaccine in a murine model, offering new insights into the development of engineered postbiotic-based adjuvants.
{"title":"Heat-Inactivated Selenium Nanoparticle-Enriched <i>Lactobacillus</i> Enhance Mucosal IgA Responses and Systemic Responses of <i>Clostridium perfringens</i> Multi-Epitope Vaccine Correlated with TGF-β and NF-κB Pathways in Mice.","authors":"Xinyao Zhou, Zheng Jia, Xinqi De, Zaixing Yang, Yifan Li, Runhang Liu, Lingdi Niu, Xinran Yao, Yuxuan Jiang, Fang Wang, Junwei Ge","doi":"10.3390/microorganisms14010180","DOIUrl":"10.3390/microorganisms14010180","url":null,"abstract":"<p><p><i>Clostridium perfringens</i> is one of the main causes of death in poultry with no vaccines approved for poultry at present. The appropriate adjuvant is critical for the development of vaccines in <i>C. perfringens</i> in poultry. Here, we utilized <i>Levilactobacillus brevis</i> for high-yielding selenium biotransformation and demonstrated that heat-inactivated nano-selenium <i>Lactobacillus</i> (HiSeL) is a safe, efficient, and chemically stable selenium immunopotentiator for <i>C. perfringens</i> vaccines. We evaluated the effectiveness of HiSeL as an immune adjuvant to modulate the efficacy of multi-epitope vaccine in mice. Subcutaneous immunization mice with HiSeL promoted high levels of specific IgG, modulated cytokine secretion, downregulated stress-related gene expression, and provided 100% protection against lethal challenge with <i>C. perfringens</i>. Surprisingly, we found that HiSeL can quickly and effectively induce SIgA production even by subcutaneous immunization. Transcriptome sequencing revealed the pivotal role of TGF-β and NF-κB signaling pathways in IgA immune responses in mice immunized with the HiSeL-adjuvanted multi-epitope vaccine. Collectively, our study provides proof-of-concept evidence that HiSeL functions as a potent adjuvant candidate for the multi-epitope vaccine in a murine model, offering new insights into the development of engineered postbiotic-based adjuvants.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844021/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146064962","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Subcutaneous mycoses are a heterogeneous group of chronic fungal infections, usually acquired through traumatic inoculation of environmental fungi and particularly severe in immunocompromised and critically ill patients. These infections involve pathogens with marked morphological and physiopathological diversity, resulting in significant diagnostic and therapeutic challenges. Conventional treatment relies on systemic antifungals such as amphotericin B, itraconazole, and other azoles; however, these therapies are often limited by poor tissue penetration, adverse effects, and prolonged treatment regimens, especially in vulnerable patient populations. In this context, nanodrugs have emerged as promising alternatives by improving solubility, stability, bioavailability, and targeted delivery to infection sites. This review conducted a comprehensive literature search in PubMed, SciELO, ScienceDirect, Web of Science, and Scopus, identifying 31 eligible studies that developed and evaluated antifungal nanosystems using in vitro, ex vivo, and/or in vivo models. Quantitative outcomes included minimum inhibitory concentration (MIC), colony-forming units (CFU), inhibition halo diameter, and survival assays. Overall, the evidence indicates that several nanosystems may overcome key pharmacological limitations of conventional antifungals and enhance therapeutic outcomes. Nevertheless, important translational challenges remain, including toxicity, long-term safety, scalability, and regulatory approval, which must be addressed before clinical implementation.
皮下真菌病是一种异质性的慢性真菌感染,通常通过环境真菌的创伤性接种获得,在免疫功能低下和危重患者中尤为严重。这些感染涉及具有明显形态和生理病理多样性的病原体,导致重大的诊断和治疗挑战。常规治疗依赖全身抗真菌药物,如两性霉素B、伊曲康唑和其他唑类药物;然而,这些疗法往往受到组织渗透不良、不良反应和治疗方案延长的限制,特别是在脆弱的患者群体中。在这种情况下,纳米药物通过改善溶解度、稳定性、生物利用度和靶向递送到感染部位而成为有希望的替代品。本综述在PubMed、SciELO、ScienceDirect、Web of Science和Scopus上进行了全面的文献检索,确定了31项符合条件的研究,这些研究利用体外、离体和/或体内模型开发和评估了抗真菌纳米系统。定量结果包括最低抑制浓度(MIC)、菌落形成单位(CFU)、抑制晕直径和存活测定。总的来说,有证据表明,几种纳米系统可能克服传统抗真菌药物的关键药理学限制,并提高治疗效果。然而,重要的转化挑战仍然存在,包括毒性、长期安全性、可扩展性和监管批准,这些都必须在临床应用之前解决。
{"title":"Nanodrugs for Subcutaneous Mycoses: Applications, Antifungal Performance, and Translational Perspectives.","authors":"Micaela Federizzi, Eduarda Canosa Adegas, Alexandre Meneghello Fuentefria, Stefanie Bressan Waller","doi":"10.3390/microorganisms14010187","DOIUrl":"10.3390/microorganisms14010187","url":null,"abstract":"<p><p>Subcutaneous mycoses are a heterogeneous group of chronic fungal infections, usually acquired through traumatic inoculation of environmental fungi and particularly severe in immunocompromised and critically ill patients. These infections involve pathogens with marked morphological and physiopathological diversity, resulting in significant diagnostic and therapeutic challenges. Conventional treatment relies on systemic antifungals such as amphotericin B, itraconazole, and other azoles; however, these therapies are often limited by poor tissue penetration, adverse effects, and prolonged treatment regimens, especially in vulnerable patient populations. In this context, nanodrugs have emerged as promising alternatives by improving solubility, stability, bioavailability, and targeted delivery to infection sites. This review conducted a comprehensive literature search in PubMed, SciELO, ScienceDirect, Web of Science, and Scopus, identifying 31 eligible studies that developed and evaluated antifungal nanosystems using <i>in vitro</i>, <i>ex vivo</i>, and/or <i>in vivo</i> models. Quantitative outcomes included minimum inhibitory concentration (MIC), colony-forming units (CFU), inhibition halo diameter, and survival assays. Overall, the evidence indicates that several nanosystems may overcome key pharmacological limitations of conventional antifungals and enhance therapeutic outcomes. Nevertheless, important translational challenges remain, including toxicity, long-term safety, scalability, and regulatory approval, which must be addressed before clinical implementation.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844405/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065050","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-14DOI: 10.3390/microorganisms14010185
Ana Elizabeth Sánchez-Becerra, Marcela Peña-Rodríguez, Alejandra Natali Vega-Magaña, Samuel García-Arellano, Hugo Antonio Romo-Rubio, Sony Flores-Navarro, Griselda Escobedo-Melendez, Saray Aranda-Romo, José Sergio Zepeda-Nuño
The oral microbiome of patients with acute lymphoblastic leukemia (ALL) undergoes changes caused by the neoplasia as well as the antimicrobial activity of chemotherapy (CTX), which promotes the development of oral mucositis (OM). This study aimed to analyze the oral microbiome dynamics and salivary cytokine production in pediatric ALL patients before and during CTX, comparing children who did and did not develop OM. We conducted a longitudinal, observational, and analytical study including 32 newly diagnosed pediatric ALL patients (ages 2-16 years) undergoing CTX. Oral rinse and non-stimulated saliva samples were collected at baseline (day 0), day 14, and day 21 of induction of CTX, with an additional sample taken during OM episodes when possible. Microbiome analysis was performed using 16S rRNA sequencing on an Illumina MiSeq platform, and salivary cytokines were measured using a Luminex multiplex assay. The most pronounced microbiome changes occurred on day 14, particularly in patients who developed OM, characterized by higher α diversity, increased abundance of opportunistic taxa, and elevated IL-6 concentrations. In contrast, patients who did not develop OM exhibited a more stable microbial composition. Overall, these findings indicate that temporal oral dysbiosis and increased IL-6 may serve as early markers and potential predictors of OM development during chemotherapy in pediatric ALL patients.
{"title":"Oral Microbiome Dynamics in Patients with Acute Lymphoblastic Leukemia and Oral Mucositis.","authors":"Ana Elizabeth Sánchez-Becerra, Marcela Peña-Rodríguez, Alejandra Natali Vega-Magaña, Samuel García-Arellano, Hugo Antonio Romo-Rubio, Sony Flores-Navarro, Griselda Escobedo-Melendez, Saray Aranda-Romo, José Sergio Zepeda-Nuño","doi":"10.3390/microorganisms14010185","DOIUrl":"10.3390/microorganisms14010185","url":null,"abstract":"<p><p>The oral microbiome of patients with acute lymphoblastic leukemia (ALL) undergoes changes caused by the neoplasia as well as the antimicrobial activity of chemotherapy (CTX), which promotes the development of oral mucositis (OM). This study aimed to analyze the oral microbiome dynamics and salivary cytokine production in pediatric ALL patients before and during CTX, comparing children who did and did not develop OM. We conducted a longitudinal, observational, and analytical study including 32 newly diagnosed pediatric ALL patients (ages 2-16 years) undergoing CTX. Oral rinse and non-stimulated saliva samples were collected at baseline (day 0), day 14, and day 21 of induction of CTX, with an additional sample taken during OM episodes when possible. Microbiome analysis was performed using 16S rRNA sequencing on an Illumina MiSeq platform, and salivary cytokines were measured using a Luminex multiplex assay. The most pronounced microbiome changes occurred on day 14, particularly in patients who developed OM, characterized by higher α diversity, increased abundance of opportunistic taxa, and elevated IL-6 concentrations. In contrast, patients who did not develop OM exhibited a more stable microbial composition. Overall, these findings indicate that temporal oral dysbiosis and increased IL-6 may serve as early markers and potential predictors of OM development during chemotherapy in pediatric ALL patients.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12843840/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-13DOI: 10.3390/microorganisms14010170
Alma Kurtiš, Jelena Antić-Stanković, Biljana Bufan, Dragana D Božić, Slađana Krivokapić, Biljana Damjanović-Vratnica, Svetlana Perović
This study aimed to investigate the chemical composition and biological potential of needle extracts from five pine species, including antimicrobial, antioxidant, and cytotoxic activity, as well as their influence on cell cycle progression. Needle extracts were prepared using three extraction methods: conventional maceration (CM), ultrasound-assisted extraction (UAE), and digestion (D). The chemical profile was determined with an emphasis on phenolic acids, flavonoids, and related phenolic compounds. The highest total phenolic content was observed in Pinus sylvestris (3.438 mg/g GAE), followed by Pinus heldreichii (2.732 mg/g GAE). Rutin, ferulic acid, and quercitrin were identified as the predominant phenolic compounds. The highest total flavonoid content was found in Pinus pinea extracts obtained by digestion (1.213 mg/g QE), followed by P. heldreichii (1.074 mg/g QE) and Pinus halepensis (1.074 mg/g QE), both obtained by UAE. Among all examined species, Pinus pinea exhibited the highest TTC values, regardless of the extraction method (7.31-8.21 mg/g GAE). Antibacterial testing showed that P. pinea had an MIC of 19 mg/mL against Enterococcus faecium, while P. sylvestris had the same MIC against Bacillus spizizenii. All extracts exhibited cytotoxic effects using MTT assay against HeLa cells at concentrations of 8%, 16%, and 32%, while LS 174T cells were the least sensitive. Pine needle extracts from Montenegro are a valuable source of phenolic and flavonoid compounds, and they demonstrate antimicrobial and cytotoxic activities. The results support the need for further in vivo studies and elucidation of mechanisms of action in order to assess their potential application as novel bioactive agents.
{"title":"Quantitative Analysis of Polyphenols and In Vitro Antioxidant, Antimicrobial and Toxicity Assessments in Needles of Five <i>Pinus</i> Species from Montenegro.","authors":"Alma Kurtiš, Jelena Antić-Stanković, Biljana Bufan, Dragana D Božić, Slađana Krivokapić, Biljana Damjanović-Vratnica, Svetlana Perović","doi":"10.3390/microorganisms14010170","DOIUrl":"10.3390/microorganisms14010170","url":null,"abstract":"<p><p>This study aimed to investigate the chemical composition and biological potential of needle extracts from five pine species, including antimicrobial, antioxidant, and cytotoxic activity, as well as their influence on cell cycle progression. Needle extracts were prepared using three extraction methods: conventional maceration (CM), ultrasound-assisted extraction (UAE), and digestion (D). The chemical profile was determined with an emphasis on phenolic acids, flavonoids, and related phenolic compounds. The highest total phenolic content was observed in <i>Pinus sylvestris</i> (3.438 mg/g GAE), followed by <i>Pinus heldreichii</i> (2.732 mg/g GAE). Rutin, ferulic acid, and quercitrin were identified as the predominant phenolic compounds. The highest total flavonoid content was found in <i>Pinus pinea</i> extracts obtained by digestion (1.213 mg/g QE), followed by <i>P. heldreichii</i> (1.074 mg/g QE) and <i>Pinus halepensis</i> (1.074 mg/g QE), both obtained by UAE. Among all examined species, <i>Pinus pinea</i> exhibited the highest TTC values, regardless of the extraction method (7.31-8.21 mg/g GAE). Antibacterial testing showed that <i>P. pinea</i> had an MIC of 19 mg/mL against <i>Enterococcus faecium</i>, while <i>P. sylvestris</i> had the same MIC against <i>Bacillus spizizenii</i>. All extracts exhibited cytotoxic effects using MTT assay against HeLa cells at concentrations of 8%, 16%, and 32%, while LS 174T cells were the least sensitive. Pine needle extracts from Montenegro are a valuable source of phenolic and flavonoid compounds, and they demonstrate antimicrobial and cytotoxic activities. The results support the need for further in vivo studies and elucidation of mechanisms of action in order to assess their potential application as novel bioactive agents.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844097/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146064279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-13DOI: 10.3390/microorganisms14010174
Yueyu Ye, Yucong Zhao, Ning Wang, Ruonan Tang, Zixin Huang, Shiqing Li, Meiya Li, Chunchun Zhang, Fusheng Jiang
Orchid seed germination requires symbiotic association with mycorrhizal fungi that provide essential nutrients for germination and subsequent growth. Extensive research has elucidated the pivotal role of the mycorrhizal fungus Tulasnella sp. in the modulation of seed germination and growth processes in Bletilla striata (Thunb.) Reiehb.f. However, the molecular mechanisms underlying this symbiosis remain poorly characterized. Our integrated transcriptomic-metabolomic analysis of symbiotic germination revealed that co-cultivation of Tulasnella sp. bj1 with B. striata seeds significantly downregulates the expression of plant-derived flavonoid biosynthetic genes, with flavonoid degradation potentially alleviating germination and growth inhibition. The bj1 strain modulates indoleacetic acid (IAA) biosynthesis in B. striata by upregulating the expression of plant-derived tryptophan decarboxylase (TDC) in the tryptophan pathway and hydrolytic enzymes (NtAMI) in the indoleacetamide pathway, with elevated IAA potentially contributing to seed germination and growth. Moreover, bj1 suppresses the jasmonic acid (JA) biosynthetic pathway of B. striata by downregulating key plant-derived biosynthetic genes, concurrently promoting the accumulation of 12-hydroxyjasmonic acid-a metabolite associated with plant immune regulation that may favor colonization and symbiotic establishment with B. striata seeds. Additionally, bj1 induces the expression of polysaccharide-degrading enzymes, potentially improving carbon source utilization to support protocorm development. In conclusion, bj1 modulates the immune response of B. striata seeds, facilitating the establishment of a symbiotic relationship. Subsequently, the germination and growth of B. striata seeds are enhanced through reduced flavonoid accumulation, increased IAA synthesis, and improved carbon source utilization. Consequently, this investigation provides a crucial foundation for elucidating mechanisms governing symbiotic germination in B. striata.
{"title":"Deciphering Molecular Pathways of <i>Bletilla striata</i> Seeds Symbiotic Germination with <i>Tulasnella</i> sp. bj1.","authors":"Yueyu Ye, Yucong Zhao, Ning Wang, Ruonan Tang, Zixin Huang, Shiqing Li, Meiya Li, Chunchun Zhang, Fusheng Jiang","doi":"10.3390/microorganisms14010174","DOIUrl":"10.3390/microorganisms14010174","url":null,"abstract":"<p><p>Orchid seed germination requires symbiotic association with mycorrhizal fungi that provide essential nutrients for germination and subsequent growth. Extensive research has elucidated the pivotal role of the mycorrhizal fungus <i>Tulasnella</i> sp. in the modulation of seed germination and growth processes in <i>Bletilla striata</i> (Thunb.) Reiehb.f. However, the molecular mechanisms underlying this symbiosis remain poorly characterized. Our integrated transcriptomic-metabolomic analysis of symbiotic germination revealed that co-cultivation of <i>Tulasnella</i> sp. bj1 with <i>B. striata</i> seeds significantly downregulates the expression of plant-derived flavonoid biosynthetic genes, with flavonoid degradation potentially alleviating germination and growth inhibition. The bj1 strain modulates indoleacetic acid (IAA) biosynthesis in <i>B. striata</i> by upregulating the expression of plant-derived tryptophan decarboxylase (TDC) in the tryptophan pathway and hydrolytic enzymes (NtAMI) in the indoleacetamide pathway, with elevated IAA potentially contributing to seed germination and growth. Moreover, bj1 suppresses the jasmonic acid (JA) biosynthetic pathway of <i>B. striata</i> by downregulating key plant-derived biosynthetic genes, concurrently promoting the accumulation of 12-hydroxyjasmonic acid-a metabolite associated with plant immune regulation that may favor colonization and symbiotic establishment with <i>B. striata</i> seeds. Additionally, bj1 induces the expression of polysaccharide-degrading enzymes, potentially improving carbon source utilization to support protocorm development. In conclusion, bj1 modulates the immune response of <i>B. striata</i> seeds, facilitating the establishment of a symbiotic relationship. Subsequently, the germination and growth of <i>B. striata</i> seeds are enhanced through reduced flavonoid accumulation, increased IAA synthesis, and improved carbon source utilization. Consequently, this investigation provides a crucial foundation for elucidating mechanisms governing symbiotic germination in <i>B. striata</i>.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844467/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Urease-producing bacteria (UPB) have great potential for the bioremediation of heavy-metal pollution through biomineralization and adsorption. In this study, a strain of UPB, C7-12, was isolated from heavy-metal-contaminated soil in a lead-zinc mining area and identified as Serratia marcescens. The heavy-metal removal ability, influencing factors, and precipitation mode of this UPB strain in solution were investigated. The cadmium (Cd) removal rate in a Cd (1 mg/L) solution from C7-12 reached 85%, and pH was the main influencing factor. With urea mediation, S. marcescens C7-12 biomineralizes the Cd2+ in solution to form CdCO3 and removes it through extracellular precipitation and surface adsorption. Furthermore, the removal rates of Cd2+, Pb2+, Zn2+ and Cu2+ in solution by S. marcescens C7-12 were 33-65%, 28-32%, 22-49%, and 38-44%, respectively. The precipitation mode involves coprecipitation of multiple heavy metals to form a mineral. These heavy metals are adsorbed on the surface of bacteria through the participation of carboxyl, amino, and phosphate functional groups and extracellular polymeric substances. Therefore, S. marcescens C7-12 has strong biomineralization and adsorption capacity for heavy-metal ions in solution, which can provide potential resources for the bioremediation of heavy-metal-contaminated soil and water.
{"title":"Urea-Mediated Biomineralization and Adsorption of Heavy-Metal Ions in Solution by the Urease-Producing Bacteria C7-12.","authors":"Qian Yang, Xiaoyi Li, Junyi Cao, Siteng He, Chengzhong He, Chunlin Tu, Keyu Zhou, Xinran Liang, Fangdong Zhan","doi":"10.3390/microorganisms14010171","DOIUrl":"10.3390/microorganisms14010171","url":null,"abstract":"<p><p>Urease-producing bacteria (UPB) have great potential for the bioremediation of heavy-metal pollution through biomineralization and adsorption. In this study, a strain of UPB, C7-12, was isolated from heavy-metal-contaminated soil in a lead-zinc mining area and identified as <i>Serratia marcescens</i>. The heavy-metal removal ability, influencing factors, and precipitation mode of this UPB strain in solution were investigated. The cadmium (Cd) removal rate in a Cd (1 mg/L) solution from C7-12 reached 85%, and pH was the main influencing factor. With urea mediation, <i>S. marcescens</i> C7-12 biomineralizes the Cd<sup>2+</sup> in solution to form CdCO<sub>3</sub> and removes it through extracellular precipitation and surface adsorption. Furthermore, the removal rates of Cd<sup>2+</sup>, Pb<sup>2+</sup>, Zn<sup>2+</sup> and Cu<sup>2+</sup> in solution by <i>S. marcescens</i> C7-12 were 33-65%, 28-32%, 22-49%, and 38-44%, respectively. The precipitation mode involves coprecipitation of multiple heavy metals to form a mineral. These heavy metals are adsorbed on the surface of bacteria through the participation of carboxyl, amino, and phosphate functional groups and extracellular polymeric substances. Therefore, <i>S. marcescens</i> C7-12 has strong biomineralization and adsorption capacity for heavy-metal ions in solution, which can provide potential resources for the bioremediation of heavy-metal-contaminated soil and water.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844014/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-13DOI: 10.3390/microorganisms14010173
Shah Zeb, Arzoo Nazir, Muhammad Fazal Hameed, Sadia Ikram, Syed Zeeshan Haider Naqvi, Muhammad Shoaib, Patrick Butaye, Zhiqiang Wang, Ruichao Li, Xiaoyu Lu
Multidrug resistance (MDR) in Gram-negative bacteria is a global issue and needs to be addressed urgently. MDR can emerge through genetic mutations and horizontal gene transfer and deteriorate under antibiotic selective pressure. The emergence of resistance to last-resort antibiotics, which are used to treat MDR bacteria, is of particular concern. Colistin has been recognized as a last-line antibiotic for the treatment of MDR Gram-negative bacterial infections caused by Escherichia coli, Acinetobacter baumannii, Klebsiella pneumoniae, and Pseudomonas aeruginosa. Recently, the increasing reports of colistin resistance pose a significant threat to public health, caused by both acquired and intrinsic mechanisms. The review aimed to elucidate the trends in colistin resistance, the use of colistin in human and veterinary medicine, underlying resistance mechanisms and transmission pathways, and potential mitigation of this emerging threat through novel intervention strategies. Colistin resistance is mediated by plasmid-encoded phosphoethanolamine transferases (mcr-1 to mcr-10) and chromosomal lipid A remodeling pathways. In Escherichia coli, resistance involves mcr-1-10, acrB efflux mutations, pmrA/pmrB, arnBCADTEF, and mgrB inactivation. Klebsiella pneumoniae exhibits mcr-1, mcr-8, mcr-9, mgrB disruption and phoP/phoQ-pmrAB activation. Acinetobacter baumannii harbors mcr-1-4, while Salmonella enterica and Enterobacter spp. carry mcr variants with arnBCADTEF induction. Therapeutic options include adjunct strategies such as antimicrobial peptides, nanomaterials, therapeutic adjuvants, CRISPR-Cas9-based gene editing, probiotics, vaccines, and immune modulators to restore susceptibility. This review identified that specific and wide actions are required to handle the growing colistin resistance, including genomic surveillance, tracing novel resistance mechanisms, and the application of alternative management strategies. The One Health approach is considered a key strategy to address this growing issue.
{"title":"Colistin Resistance in Gram-Negative Bacteria: Mechanisms, Transmission, and Novel Intervention Strategies.","authors":"Shah Zeb, Arzoo Nazir, Muhammad Fazal Hameed, Sadia Ikram, Syed Zeeshan Haider Naqvi, Muhammad Shoaib, Patrick Butaye, Zhiqiang Wang, Ruichao Li, Xiaoyu Lu","doi":"10.3390/microorganisms14010173","DOIUrl":"10.3390/microorganisms14010173","url":null,"abstract":"<p><p>Multidrug resistance (MDR) in Gram-negative bacteria is a global issue and needs to be addressed urgently. MDR can emerge through genetic mutations and horizontal gene transfer and deteriorate under antibiotic selective pressure. The emergence of resistance to last-resort antibiotics, which are used to treat MDR bacteria, is of particular concern. Colistin has been recognized as a last-line antibiotic for the treatment of MDR Gram-negative bacterial infections caused by <i>Escherichia coli</i>, <i>Acinetobacter baumannii</i>, <i>Klebsiella pneumoniae</i>, and <i>Pseudomonas aeruginosa</i>. Recently, the increasing reports of colistin resistance pose a significant threat to public health, caused by both acquired and intrinsic mechanisms. The review aimed to elucidate the trends in colistin resistance, the use of colistin in human and veterinary medicine, underlying resistance mechanisms and transmission pathways, and potential mitigation of this emerging threat through novel intervention strategies. Colistin resistance is mediated by plasmid-encoded phosphoethanolamine transferases (<i>mcr-1</i> to <i>mcr-10</i>) and chromosomal lipid A remodeling pathways. In <i>Escherichia coli</i>, resistance involves <i>mcr-1-10</i>, <i>acrB</i> efflux mutations, <i>pmrA/pmrB</i>, <i>arnBCADTEF</i>, and <i>mgrB</i> inactivation. <i>Klebsiella pneumoniae</i> exhibits <i>mcr-1</i>, <i>mcr-8</i>, <i>mcr-9</i>, <i>mgrB</i> disruption and <i>phoP/phoQ-pmrAB</i> activation. <i>Acinetobacter baumannii</i> harbors <i>mcr-1-4</i>, while <i>Salmonella enterica</i> and <i>Enterobacter</i> spp. carry <i>mcr</i> variants with <i>arnBCADTEF</i> induction. Therapeutic options include adjunct strategies such as antimicrobial peptides, nanomaterials, therapeutic adjuvants, <i>CRISPR-Cas9</i>-based gene editing, probiotics, vaccines, and immune modulators to restore susceptibility. This review identified that specific and wide actions are required to handle the growing colistin resistance, including genomic surveillance, tracing novel resistance mechanisms, and the application of alternative management strategies. The One Health approach is considered a key strategy to address this growing issue.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844150/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-13DOI: 10.3390/microorganisms14010169
Sven-Ulrik Gorr
In the original publication [...].
在原出版物中[…]。
{"title":"Correction: Gorr, S.-U. Targeted Modification of the Antimicrobial Peptide DGL13K Reveals a Naturally Optimized Sequence for Topical Applications. <i>Microorganisms</i> 2025, <i>13</i>, 2355.","authors":"Sven-Ulrik Gorr","doi":"10.3390/microorganisms14010169","DOIUrl":"10.3390/microorganisms14010169","url":null,"abstract":"<p><p>In the original publication [...].</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12843886/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146065111","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-13DOI: 10.3390/microorganisms14010175
Anne Oppelt, Tran Yen Nhi Nguyen, Yaodan Zhang, Dirk Weuster-Botz
Simultaneous conversion of syngas and sugars is a promising approach to overcome limitations of syngas fermentation. Clostridium autoethanogenum LAbrini, obtained by adaptive laboratory evolution, is known to show improved autotrophic process performance. Under purely autotrophic conditions, C. autoethanogenum LAbrini exhibits substantially faster growth and biomass formation compared to the wild-type in fully controlled, stirred-tank bioreactors with a continuous gas supply. In mixotrophic processes, the pre-culture strategy has a significant impact on the growth and metabolic activity of C. autoethanogenum LAbrini. C. autoethanogenum LAbrini can metabolize sugars (D-fructose, D-xylose, or L-arabinose) and CO simultaneously. All mixotrophic batch processes showed increased growth and product formation compared to the autotrophic process. The mixotrophic batch process with D-fructose enabled superior production of alcohols (10.7 g L-1 ethanol and 3.2 g L-1 D-2,3-butanediol) with a heterotrophic pre-culture. Using an autotrophic pre-culture and L-arabinose resulted in a total alcohol formation of more than 13 g L-1. The formation of meso-2,3-butanediol (>0.50 g L-1) occurred exclusively under mixotrophic conditions. Thus, C. autoethanogenum LAbrini, clearly representing notable improvements over the wild-type strain in mixotrophic batch processes, offers a good basis for further strain improvements to shift the product range even further towards more reduced products.
合成气和糖的同时转化是克服合成气发酵局限性的一种很有前途的方法。通过适应性实验室进化获得的自产乙醇梭菌(Clostridium autoethogenum LAbrini)显示出改善的自养过程性能。在纯自养条件下,与野生型相比,C. autoethanogenum LAbrini在完全控制、连续供气的搅拌槽生物反应器中表现出明显更快的生长和生物量形成。在混合营养过程中,预培养策略对C. autoethogenum LAbrini的生长和代谢活性有显著影响。C. autoethanogenum LAbrini可以同时代谢糖(d -果糖、d -木糖或l -阿拉伯糖)和CO。与自养过程相比,所有混合营养间歇过程均表现出生长和产物形成的增加。在异养预培养条件下,采用d -果糖混合营养分批处理工艺可获得较好的醇类(10.7 g L-1乙醇和3.2 g L-1 d -2,3-丁二醇)产量。使用自养预培养和l -阿拉伯糖导致总酒精形成超过13 g L-1。中2,3-丁二醇(> .50 g L-1)只在混合营养条件下生成。因此,C. autoethanogenum LAbrini在混合营养批处理过程中明显优于野生型菌株,为进一步改进菌株以进一步将产品范围转向更简化的产品提供了良好的基础。
{"title":"Autotrophic and Mixotrophic Batch Processes with <i>Clostridium autoethanogenum</i> LAbrini in Stirred Tank Bioreactors with Continuous Gassing.","authors":"Anne Oppelt, Tran Yen Nhi Nguyen, Yaodan Zhang, Dirk Weuster-Botz","doi":"10.3390/microorganisms14010175","DOIUrl":"10.3390/microorganisms14010175","url":null,"abstract":"<p><p>Simultaneous conversion of syngas and sugars is a promising approach to overcome limitations of syngas fermentation. <i>Clostridium autoethanogenum</i> LAbrini, obtained by adaptive laboratory evolution, is known to show improved autotrophic process performance. Under purely autotrophic conditions, <i>C. autoethanogenum</i> LAbrini exhibits substantially faster growth and biomass formation compared to the wild-type in fully controlled, stirred-tank bioreactors with a continuous gas supply. In mixotrophic processes, the pre-culture strategy has a significant impact on the growth and metabolic activity of <i>C. autoethanogenum</i> LAbrini. <i>C. autoethanogenum</i> LAbrini can metabolize sugars (D-fructose, D-xylose, or L-arabinose) and CO simultaneously. All mixotrophic batch processes showed increased growth and product formation compared to the autotrophic process. The mixotrophic batch process with D-fructose enabled superior production of alcohols (10.7 g L<sup>-1</sup> ethanol and 3.2 g L<sup>-1</sup> D-2,3-butanediol) with a heterotrophic pre-culture. Using an autotrophic pre-culture and L-arabinose resulted in a total alcohol formation of more than 13 g L<sup>-1</sup>. The formation of <i>meso</i>-2,3-butanediol (>0.50 g L<sup>-1</sup>) occurred exclusively under mixotrophic conditions. Thus, <i>C. autoethanogenum</i> LAbrini, clearly representing notable improvements over the wild-type strain in mixotrophic batch processes, offers a good basis for further strain improvements to shift the product range even further towards more reduced products.</p>","PeriodicalId":18667,"journal":{"name":"Microorganisms","volume":"14 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12844154/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146064858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}