Hui Qian, Long Lin, Zhichao Zhang, Xinyi Gu, Danyu Shen, Zhiyuan Yin, Wenwu Ye, Daolong Dou, Yuanchao Wang
Phytophthora pathogens possess hundreds of effector genes that exhibit diverse expression patterns during infection, yet how the expression of effector genes is precisely regulated remains largely elusive. Previous studies have identified a few potential conserved transcription factor binding sites (TFBSs) in the promoters of Phytophthora effector genes. Here, we report a MYB-related protein, PsMyb37, in Phytophthora sojae, the major causal agent of root and stem rot in soybean. Yeast one-hybrid and electrophoretic mobility shift assays showed that PsMyb37 binds to the TACATGTA motif, the most prevalent TFBS in effector gene promoters. The knockout mutant of PsMyb37 exhibited significantly reduced virulence on soybean and was more sensitive to oxidative stress. Consistently, transcriptome analysis showed that numerous effector genes associated with suppressing plant immunity or scavenging reactive oxygen species were down-regulated in the PsMyb37 knockout mutant during infection compared to the wild-type P. sojae. Several promoters of effector genes were confirmed to drive the expression of luciferase in a reporter assay. These results demonstrate that a MYB-related transcription factor contributes to the expression of effector genes in P. sojae.
噬菌体病原体拥有数百个效应基因,这些基因在感染过程中表现出不同的表达模式,但效应基因的表达如何受到精确调控在很大程度上仍然是个谜。以前的研究发现了疫霉菌效应基因启动子中几个潜在的保守转录因子结合位点(TFBSs)。在此,我们报告了大豆根腐病和茎腐病主要病原 Phytophthora sojae 中的一种 MYB 相关蛋白 PsMyb37。酵母单杂交和电泳迁移实验表明,PsMyb37 与效应基因启动子中最常见的 TFBS--TACATGTA 基序结合。PsMyb37 基因敲除突变体对大豆的毒力明显降低,而且对氧化应激更敏感。转录组分析表明,与野生型 P. sojae 相比,PsMyb37 基因敲除突变体在感染期间下调了许多与抑制植物免疫或清除活性氧相关的效应基因。一些效应基因的启动子被证实能在报告实验中驱动荧光素酶的表达。这些结果表明,与 MYB 相关的转录因子促进了 P. sojae 中效应基因的表达。
{"title":"A MYB-related transcription factor regulates effector gene expression in an oomycete pathogen.","authors":"Hui Qian, Long Lin, Zhichao Zhang, Xinyi Gu, Danyu Shen, Zhiyuan Yin, Wenwu Ye, Daolong Dou, Yuanchao Wang","doi":"10.1111/mpp.13468","DOIUrl":"10.1111/mpp.13468","url":null,"abstract":"<p><p>Phytophthora pathogens possess hundreds of effector genes that exhibit diverse expression patterns during infection, yet how the expression of effector genes is precisely regulated remains largely elusive. Previous studies have identified a few potential conserved transcription factor binding sites (TFBSs) in the promoters of Phytophthora effector genes. Here, we report a MYB-related protein, PsMyb37, in Phytophthora sojae, the major causal agent of root and stem rot in soybean. Yeast one-hybrid and electrophoretic mobility shift assays showed that PsMyb37 binds to the TACATGTA motif, the most prevalent TFBS in effector gene promoters. The knockout mutant of PsMyb37 exhibited significantly reduced virulence on soybean and was more sensitive to oxidative stress. Consistently, transcriptome analysis showed that numerous effector genes associated with suppressing plant immunity or scavenging reactive oxygen species were down-regulated in the PsMyb37 knockout mutant during infection compared to the wild-type P. sojae. Several promoters of effector genes were confirmed to drive the expression of luciferase in a reporter assay. These results demonstrate that a MYB-related transcription factor contributes to the expression of effector genes in P. sojae.</p>","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"25 6","pages":"e13468"},"PeriodicalIF":4.9,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11134190/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141161991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Hao Sun, Malgorzata Ciska, Mongia Makki, Francisco Tenllado, Tomás Canto
We had previously reported that a plum pox virus (PPV)-based chimera that had its P1-HCPro bi-cistron replaced by a modified one from potato virus Y (PVY) increased its virulence in some Nicotiana benthamiana plants, after mechanical passages. This correlated with the natural acquisition of amino acid substitutions in several proteins, including in HCPro at either position 352 (Ile→Thr) or 454 (Leu→Arg), or of mutations in non-coding regions. Thr in position 352 is not found among natural potyviruses, while Arg in 454 is a reversion to the native PVY HCPro amino acid. We show here that both mutations separately contributed to the increased virulence observed in the passaged chimeras that acquired them, and that Thr in position 352 is no intragenic suppressor to a Leu in position 454, because their combined effects were cumulative. We demonstrate that Arg in position 454 improved HCPro autocatalytic cleavage, while Thr in position 352 increased its accumulation and the silencing suppression of a reporter in agropatch assays. We assessed infection by four cloned chimera variants expressing HCPro with none of the two substitutions, one of them or both, in wild-type versus DCL2/4-silenced transgenic plants. We found that during infection, the transgenic context of altered small RNAs affected the accumulation of the four HCPro variants differently and hence, also infection virulence.
{"title":"Adaptive substitutions at two amino acids of HCPro modify its functional properties to separately increase the virulence of a potyviral chimera.","authors":"Hao Sun, Malgorzata Ciska, Mongia Makki, Francisco Tenllado, Tomás Canto","doi":"10.1111/mpp.13487","DOIUrl":"10.1111/mpp.13487","url":null,"abstract":"<p><p>We had previously reported that a plum pox virus (PPV)-based chimera that had its P1-HCPro bi-cistron replaced by a modified one from potato virus Y (PVY) increased its virulence in some Nicotiana benthamiana plants, after mechanical passages. This correlated with the natural acquisition of amino acid substitutions in several proteins, including in HCPro at either position 352 (Ile→Thr) or 454 (Leu→Arg), or of mutations in non-coding regions. Thr in position 352 is not found among natural potyviruses, while Arg in 454 is a reversion to the native PVY HCPro amino acid. We show here that both mutations separately contributed to the increased virulence observed in the passaged chimeras that acquired them, and that Thr in position 352 is no intragenic suppressor to a Leu in position 454, because their combined effects were cumulative. We demonstrate that Arg in position 454 improved HCPro autocatalytic cleavage, while Thr in position 352 increased its accumulation and the silencing suppression of a reporter in agropatch assays. We assessed infection by four cloned chimera variants expressing HCPro with none of the two substitutions, one of them or both, in wild-type versus DCL2/4-silenced transgenic plants. We found that during infection, the transgenic context of altered small RNAs affected the accumulation of the four HCPro variants differently and hence, also infection virulence.</p>","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"25 6","pages":"e13487"},"PeriodicalIF":4.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11178974/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141321246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
As a universal second messenger, cytosolic calcium (Ca2+) functions in multifaceted intracellular processes, including growth, development and responses to biotic/abiotic stresses in plant. The plant-specific Ca2+ sensors, calmodulin and calmodulin-like (CML) proteins, function as members of the second-messenger system to transfer Ca2+ signal into downstream responses. However, the functions of CMLs in the responses of cotton (Gossypium spp.) after Verticillium dahliae infection, which causes the serious vascular disease Verticillium wilt, remain elusive. Here, we discovered that the expression level of GbCML45 was promoted after V. dahliae infection in roots of cotton, suggesting its potential role in Verticillium wilt resistance. We found that knockdown of GbCML45 in cotton plants decreased resistance while overexpression of GbCML45 in Arabidopsis thaliana plants enhanced resistance to V. dahliae infection. Furthermore, there was physiological interaction between GbCML45 and its close homologue GbCML50 by using yeast two-hybrid and bimolecular fluorescence assays, and both proteins enhanced cotton resistance to V. dahliae infection in a Ca2+-dependent way in a knockdown study. Detailed investigations indicated that several defence-related pathways, including salicylic acid, ethylene, reactive oxygen species and nitric oxide signalling pathways, as well as accumulations of lignin and callose, are responsible for GbCML45- and GbCML50-modulated V. dahliae resistance in cotton. These results collectively indicated that GbCML45 and GbCML50 act as positive regulators to improve cotton Verticillium wilt resistance, providing potential targets for exploitation of improved Verticillium wilt-tolerant cotton cultivars by genetic engineering and molecular breeding.
{"title":"Positive roles of the Ca<sup>2+</sup> sensors GbCML45 and GbCML50 in improving cotton Verticillium wilt resistance.","authors":"Feifei Yi, Yuzhe Li, Aosong Song, Xinying Shi, Shanci Hu, Shuang Wu, Lili Shao, Zongyan Chu, Kun Xu, Liangliang Li, Lam-Son Phan Tran, Weiqiang Li, Yingfan Cai","doi":"10.1111/mpp.13483","DOIUrl":"10.1111/mpp.13483","url":null,"abstract":"<p><p>As a universal second messenger, cytosolic calcium (Ca<sup>2+</sup>) functions in multifaceted intracellular processes, including growth, development and responses to biotic/abiotic stresses in plant. The plant-specific Ca<sup>2+</sup> sensors, calmodulin and calmodulin-like (CML) proteins, function as members of the second-messenger system to transfer Ca<sup>2+</sup> signal into downstream responses. However, the functions of CMLs in the responses of cotton (Gossypium spp.) after Verticillium dahliae infection, which causes the serious vascular disease Verticillium wilt, remain elusive. Here, we discovered that the expression level of GbCML45 was promoted after V. dahliae infection in roots of cotton, suggesting its potential role in Verticillium wilt resistance. We found that knockdown of GbCML45 in cotton plants decreased resistance while overexpression of GbCML45 in Arabidopsis thaliana plants enhanced resistance to V. dahliae infection. Furthermore, there was physiological interaction between GbCML45 and its close homologue GbCML50 by using yeast two-hybrid and bimolecular fluorescence assays, and both proteins enhanced cotton resistance to V. dahliae infection in a Ca<sup>2+</sup>-dependent way in a knockdown study. Detailed investigations indicated that several defence-related pathways, including salicylic acid, ethylene, reactive oxygen species and nitric oxide signalling pathways, as well as accumulations of lignin and callose, are responsible for GbCML45- and GbCML50-modulated V. dahliae resistance in cotton. These results collectively indicated that GbCML45 and GbCML50 act as positive regulators to improve cotton Verticillium wilt resistance, providing potential targets for exploitation of improved Verticillium wilt-tolerant cotton cultivars by genetic engineering and molecular breeding.</p>","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"25 6","pages":"e13483"},"PeriodicalIF":4.9,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11146148/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141199202","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
MicroRNAs (miRNAs) are widely involved in various biological processes of plants and contribute to plant resistance against various pathogens. In this study, upon sugarcane mosaic virus (SCMV) infection, the accumulation of maize (Zea mays) miR398b (ZmmiR398b) was significantly reduced in resistant inbred line Chang7‐2, while it was increased in susceptible inbred line Mo17. Degradome sequencing analysis coupled with transient co‐expression assays revealed that ZmmiR398b can target Cu/Zn‐superoxidase dismutase2 (ZmCSD2), ZmCSD4, and ZmCSD9 in vivo, of which the expression levels were all upregulated by SCMV infection in Chang7‐2 and Mo17. Moreover, overexpressing ZmmiR398b (OE398b) exhibited increased susceptibility to SCMV infection, probably by increasing reactive oxygen species (ROS) accumulation, which were consistent with ZmCSD2/4/9‐silenced maize plants. By contrast, silencing ZmmiR398b (STTM398b) through short tandem target mimic (STTM) technology enhanced maize resistance to SCMV infection and decreased ROS levels. Interestingly, copper (Cu)‐gradient hydroponic experiments demonstrated that Cu deficiency promoted SCMV infection while Cu sufficiency inhibited SCMV infection by regulating accumulations of ZmmiR398b and ZmCSD2/4/9 in maize. These results revealed that manipulating the ZmmiR398b‐ZmCSD2/4/9‐ROS module provides a prospective strategy for developing SCMV‐tolerant maize varieties.
{"title":"ZmmiR398b negatively regulates maize resistance to sugarcane mosaic virus infection by targeting ZmCSD2/4/9","authors":"Xinran Gao, Zhichao Du, Kaiqiang Hao, Sijia Zhang, Jian Li, Jinxiu Guo, Zhiping Wang, Shixue Zhao, Lijun Sang, Mengnan An, Zihao Xia, Yuanhua Wu","doi":"10.1111/mpp.13462","DOIUrl":"https://doi.org/10.1111/mpp.13462","url":null,"abstract":"MicroRNAs (miRNAs) are widely involved in various biological processes of plants and contribute to plant resistance against various pathogens. In this study, upon sugarcane mosaic virus (SCMV) infection, the accumulation of maize (<jats:italic>Zea mays</jats:italic>) miR398b (ZmmiR398b) was significantly reduced in resistant inbred line Chang7‐2, while it was increased in susceptible inbred line Mo17. Degradome sequencing analysis coupled with transient co‐expression assays revealed that ZmmiR398b can target <jats:italic>Cu/Zn‐superoxidase dismutase2</jats:italic> (<jats:italic>ZmCSD2</jats:italic>), <jats:italic>ZmCSD4</jats:italic>, and <jats:italic>ZmCSD9</jats:italic> in vivo, of which the expression levels were all upregulated by SCMV infection in Chang7‐2 and Mo17. Moreover, overexpressing <jats:italic>ZmmiR398b</jats:italic> (OE398b) exhibited increased susceptibility to SCMV infection, probably by increasing reactive oxygen species (ROS) accumulation, which were consistent with <jats:italic>ZmCSD2/4/9</jats:italic>‐silenced maize plants. By contrast, silencing <jats:italic>ZmmiR398b</jats:italic> (STTM398b) through short tandem target mimic (STTM) technology enhanced maize resistance to SCMV infection and decreased ROS levels. Interestingly, copper (Cu)‐gradient hydroponic experiments demonstrated that Cu deficiency promoted SCMV infection while Cu sufficiency inhibited SCMV infection by regulating accumulations of ZmmiR398b and <jats:italic>ZmCSD2/4/9</jats:italic> in maize. These results revealed that manipulating the ZmmiR398b<jats:italic>‐ZmCSD2/4/9‐</jats:italic>ROS module provides a prospective strategy for developing SCMV‐tolerant maize varieties.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"69 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140842303","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Louisa Wirtz, Florencia Casanova, Ulrich Schaffrath, Alex Wegner
Reverse genetic approaches are common tools in genomics for elucidating gene functions, involving techniques such as gene deletion followed by screening for aberrant phenotypes. If the generation of gene deletion mutants fails, the question arises whether the failure stems from technical issues or because the gene of interest (GOI) is essential, meaning that the deletion causes lethality. In this report, we introduce a novel method for assessing gene essentiality using the phytopathogenic ascomycete Magnaporthe oryzae. The method is based on the observation that telomere vectors are lost in transformants during cultivation without selection pressure. We tested the hypothesis that essential genes can be identified in deletion mutants co‐transformed with a telomere vector. The M. oryzae gene MoPKC, described in literature as essential, was chosen as GOI. Using CRISPR/Cas9 technology transformants with deleted GOI were generated and backed up by a telomere vector carrying a copy of the GOI and conferring fenhexamid resistance. Transformants in which the GOI deletion in the genome was not successful lost the telomere vector on media without fenhexamid. In contrast, transformants with confirmed GOI deletion retained the telomere vector even in absence of fenhexamid selection. In the latter case, the maintenance of the telomere indicates that the GOI is essential for the surveillance of the fungi, as it would have been lost otherwise. The method presented here allows to test for essentiality of genes when no mutants can be obtained from gene deletion approaches, thereby expanding the toolbox for studying gene function in ascomycetes.
反向遗传方法是基因组学中阐明基因功能的常用工具,涉及基因缺失后筛选异常表型等技术。如果基因缺失突变体的生成失败,那么问题就来了,失败是源于技术问题,还是因为相关基因(GOI)是必需的,即基因缺失会导致致死。在本报告中,我们介绍了一种利用植物致病性子囊菌 Magnaporthe oryzae 评估基因本质的新方法。该方法基于对端粒载体在无选择压力的培养过程中在转化体中丢失的观察。我们对这一假设进行了测试,即可以在与端粒载体共同转化的缺失突变体中鉴定出重要基因。我们选择了文献中描述为必需基因的 M. oryzae 基因 MoPKC 作为 GOI。利用CRISPR/Cas9技术生成了删除了GOI的转化子,并由携带GOI拷贝的端粒载体提供支持,使其具有苯海拉明抗性。基因组中GOI缺失不成功的转化子在不含茚虫威的培养基上失去了端粒载体。与此相反,基因组中GOI缺失被确认的转化子即使在没有茚虫威选择的情况下也能保留端粒载体。在后一种情况下,端粒的保留表明 GOI 对真菌的监控是必不可少的,否则它就会丢失。本文介绍的方法可以在基因缺失方法无法获得突变体的情况下测试基因的必要性,从而扩大了研究子囊菌基因功能的工具箱。
{"title":"Development of a telomere vector‐based approach to overcome limitations caused by lethal phenotypes in the study of essential genes in Magnaporthe oryzae","authors":"Louisa Wirtz, Florencia Casanova, Ulrich Schaffrath, Alex Wegner","doi":"10.1111/mpp.13460","DOIUrl":"https://doi.org/10.1111/mpp.13460","url":null,"abstract":"Reverse genetic approaches are common tools in genomics for elucidating gene functions, involving techniques such as gene deletion followed by screening for aberrant phenotypes. If the generation of gene deletion mutants fails, the question arises whether the failure stems from technical issues or because the gene of interest (GOI) is essential, meaning that the deletion causes lethality. In this report, we introduce a novel method for assessing gene essentiality using the phytopathogenic ascomycete <jats:italic>Magnaporthe oryzae</jats:italic>. The method is based on the observation that telomere vectors are lost in transformants during cultivation without selection pressure. We tested the hypothesis that essential genes can be identified in deletion mutants co‐transformed with a telomere vector. The <jats:italic>M. oryzae</jats:italic> gene <jats:italic>MoPKC</jats:italic>, described in literature as essential, was chosen as GOI. Using CRISPR/Cas9 technology transformants with deleted GOI were generated and backed up by a telomere vector carrying a copy of the GOI and conferring fenhexamid resistance. Transformants in which the GOI deletion in the genome was not successful lost the telomere vector on media without fenhexamid. In contrast, transformants with confirmed GOI deletion retained the telomere vector even in absence of fenhexamid selection. In the latter case, the maintenance of the telomere indicates that the GOI is essential for the surveillance of the fungi, as it would have been lost otherwise. The method presented here allows to test for essentiality of genes when no mutants can be obtained from gene deletion approaches, thereby expanding the toolbox for studying gene function in ascomycetes.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"91 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140842465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ming Ma, Liguang Tang, Rui Sun, Xueliang Lyu, Jiatao Xie, Yanping Fu, Bo Li, Tao Chen, Yang Lin, Xiao Yu, Weidong Chen, Daohong Jiang, Jiasen Cheng
Many plant pathogens secrete effector proteins into the host plant to suppress host immunity and facilitate pathogen colonization. The necrotrophic pathogen Sclerotinia sclerotiorum causes severe plant diseases and results in enormous economic losses, in which secreted proteins play a crucial role. SsCVNH was previously reported as a secreted protein, and its expression is significantly upregulated at 3 h after inoculation on the host plant. Here, we further demonstrated that deletion of SsCVNH leads to attenuated virulence. Heterologous expression of SsCVNH in Arabidopsis enhanced pathogen infection, inhibited the host PAMP‐triggered immunity (PTI) response and increased plant susceptibility to S. sclerotiorum. SsCVNH interacted with class III peroxidase AtPRX71, a positive regulator of innate immunity against plant pathogens. SsCVNH could also interact with other class III peroxidases, thus reducing peroxidase activity and suppressing plant immunity. Our results reveal a new infection strategy employed by S. sclerotiorum in which the fungus suppresses the function of class III peroxidases, the major component of PTI to promote its own infection.
许多植物病原体会向寄主植物分泌效应蛋白,以抑制寄主的免疫力并促进病原体的定殖。坏死性病原菌 Sclerotinia sclerotiorum 会导致严重的植物病害,造成巨大的经济损失,其中分泌蛋白起着至关重要的作用。之前有报道称 SsCVNH 是一种分泌蛋白,其表达在宿主植物接种后 3 小时显著上调。在这里,我们进一步证明了 SsCVNH 的缺失会导致毒力减弱。在拟南芥中异源表达 SsCVNH 会增强病原体感染,抑制宿主的 PAMP 触发免疫(PTI)反应,并增加植物对 S. sclerotiorum 的易感性。SsCVNH 与第三类过氧化物酶 AtPRX71 相互作用,后者是对抗植物病原体的先天性免疫的正调控因子。SsCVNH 还能与其他 III 类过氧化物酶相互作用,从而降低过氧化物酶的活性,抑制植物免疫。我们的研究结果揭示了 S. sclerotiorum 采用的一种新的感染策略,即真菌抑制 PTI 的主要成分 III 类过氧化物酶的功能,以促进自身感染。
{"title":"An effector SsCVNH promotes the virulence of Sclerotinia sclerotiorum through targeting class III peroxidase AtPRX71","authors":"Ming Ma, Liguang Tang, Rui Sun, Xueliang Lyu, Jiatao Xie, Yanping Fu, Bo Li, Tao Chen, Yang Lin, Xiao Yu, Weidong Chen, Daohong Jiang, Jiasen Cheng","doi":"10.1111/mpp.13464","DOIUrl":"https://doi.org/10.1111/mpp.13464","url":null,"abstract":"Many plant pathogens secrete effector proteins into the host plant to suppress host immunity and facilitate pathogen colonization. The necrotrophic pathogen <jats:italic>Sclerotinia sclerotiorum</jats:italic> causes severe plant diseases and results in enormous economic losses, in which secreted proteins play a crucial role. SsCVNH was previously reported as a secreted protein, and its expression is significantly upregulated at 3 h after inoculation on the host plant. Here, we further demonstrated that deletion of <jats:italic>SsCVNH</jats:italic> leads to attenuated virulence. Heterologous expression of <jats:italic>SsCVNH</jats:italic> in <jats:italic>Arabidopsis</jats:italic> enhanced pathogen infection, inhibited the host PAMP‐triggered immunity (PTI) response and increased plant susceptibility to <jats:italic>S. sclerotiorum</jats:italic>. SsCVNH interacted with class III peroxidase AtPRX71, a positive regulator of innate immunity against plant pathogens. SsCVNH could also interact with other class III peroxidases, thus reducing peroxidase activity and suppressing plant immunity. Our results reveal a new infection strategy employed by <jats:italic>S. sclerotiorum</jats:italic> in which the fungus suppresses the function of class III peroxidases, the major component of PTI to promote its own infection.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"24 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140842128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tracy E. Hawk, Sarbottam Piya, Mst Shamira Sultana, Sobhan Bahrami Zadegan, Sarah Shipp, Nicole Coffey, Natalie B. McBride, John H. Rice, Tarek Hewezi
Mitogen‐activated protein kinase (MPK) cascades play central signalling roles in plant immunity and stress response. The soybean orthologue of MPK kinase2 (GmMKK2) was recently identified as a potential signalling node whose expression is upregulated in the feeding site induced by soybean cyst nematode (SCN, Heterodera glycines). To investigate the role of GmMKK2 in soybean–SCN interactions, we overexpressed a catabolically inactive variant referred to as kinase‐dead variant (KD‐GmMKK2) using transgenic hairy roots. KD‐GmMKK2 overexpression caused significant reduction in soybean susceptibility to SCN, while overexpression of the wild‐type variant (WT‐GmMKK2) exhibited no effect on susceptibility. Transcriptome analysis indicated that KD‐GmMKK2 overexpressing plants are primed for SCN resistance via constitutive activation of defence signalling, particularly those related to chitin, respiratory burst, hydrogen peroxide and salicylic acid. Phosphoproteomic profiling of the WT‐GmMKK2 and KD‐GmMKK2 root samples upon SCN infection resulted in the identification of 391 potential targets of GmMKK2. These targets are involved in a broad range of biological processes, including defence signalling, vesicle fusion, chromatin remodelling and nuclear organization among others. Furthermore, GmMKK2 mediates phosphorylation of numerous transcriptional and translational regulators, pointing to the presence of signalling shortcuts besides the canonical MAPK cascades to initiate downstream signalling that eventually regulates gene expression and translation initiation. Finally, the functional requirement of specific phosphorylation sites for soybean response to SCN infection was validated by overexpressing phospho‐mimic and phospho‐dead variants of two differentially phosphorylated proteins SUN1 and IDD4. Together, our analyses identify GmMKK2 impacts on signalling modules that regulate soybean response to SCN infection.
{"title":"Soybean MKK2 establishes intricate signalling pathways to regulate soybean response to cyst nematode infection","authors":"Tracy E. Hawk, Sarbottam Piya, Mst Shamira Sultana, Sobhan Bahrami Zadegan, Sarah Shipp, Nicole Coffey, Natalie B. McBride, John H. Rice, Tarek Hewezi","doi":"10.1111/mpp.13461","DOIUrl":"https://doi.org/10.1111/mpp.13461","url":null,"abstract":"Mitogen‐activated protein kinase (MPK) cascades play central signalling roles in plant immunity and stress response. The soybean orthologue of MPK kinase2 (GmMKK2) was recently identified as a potential signalling node whose expression is upregulated in the feeding site induced by soybean cyst nematode (SCN, <jats:italic>Heterodera glycines</jats:italic>). To investigate the role of GmMKK2 in soybean–SCN interactions, we overexpressed a catabolically inactive variant referred to as kinase‐dead variant (KD‐GmMKK2) using transgenic hairy roots. <jats:italic>KD‐GmMKK2</jats:italic> overexpression caused significant reduction in soybean susceptibility to SCN, while overexpression of the wild‐type variant (<jats:italic>WT‐GmMKK2</jats:italic>) exhibited no effect on susceptibility. Transcriptome analysis indicated that <jats:italic>KD‐GmMKK2</jats:italic> overexpressing plants are primed for SCN resistance via constitutive activation of defence signalling, particularly those related to chitin, respiratory burst, hydrogen peroxide and salicylic acid. Phosphoproteomic profiling of the <jats:italic>WT‐GmMKK2</jats:italic> and <jats:italic>KD‐GmMKK2</jats:italic> root samples upon SCN infection resulted in the identification of 391 potential targets of GmMKK2. These targets are involved in a broad range of biological processes, including defence signalling, vesicle fusion, chromatin remodelling and nuclear organization among others. Furthermore, GmMKK2 mediates phosphorylation of numerous transcriptional and translational regulators, pointing to the presence of signalling shortcuts besides the canonical MAPK cascades to initiate downstream signalling that eventually regulates gene expression and translation initiation. Finally, the functional requirement of specific phosphorylation sites for soybean response to SCN infection was validated by overexpressing phospho‐mimic and phospho‐dead variants of two differentially phosphorylated proteins SUN1 and IDD4. Together, our analyses identify GmMKK2 impacts on signalling modules that regulate soybean response to SCN infection.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"36 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140833681","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zizhang Li, Valeria Velásquez‐Zapata, J. Mitch Elmore, Xuan Li, Wenjun Xie, Sohini Deb, Xiao Tian, Sagnik Banerjee, Hans J. L. Jørgensen, Carsten Pedersen, Roger P. Wise, Hans Thordal‐Christensen
The barley powdery mildew fungus, Blumeria hordei (Bh), secretes hundreds of candidate secreted effector proteins (CSEPs) to facilitate pathogen infection and colonization. One of these, CSEP0008, is directly recognized by the barley nucleotide‐binding leucine‐rich‐repeat (NLR) receptor MLA1 and therefore is designated AVRA1. Here, we show that AVRA1 and the sequence‐unrelated Bh effector BEC1016 (CSEP0491) suppress immunity in barley. We used yeast two‐hybrid next‐generation interaction screens (Y2H‐NGIS), followed by binary Y2H and in planta protein–protein interactions studies, and identified a common barley target of AVRA1 and BEC1016, the endoplasmic reticulum (ER)‐localized J‐domain protein HvERdj3B. Silencing of this ER quality control (ERQC) protein increased Bh penetration. HvERdj3B is ER luminal, and we showed using split GFP that AVRA1 and BEC1016 translocate into the ER signal peptide‐independently. Overexpression of the two effectors impeded trafficking of a vacuolar marker through the ER; silencing of HvERdj3B also exhibited this same cellular phenotype, coinciding with the effectors targeting this ERQC component. Together, these results suggest that the barley innate immunity, preventing Bh entry into epidermal cells, requires ERQC. Here, the J‐domain protein HvERdj3B appears to be essential and can be regulated by AVRA1 and BEC1016. Plant disease resistance often occurs upon direct or indirect recognition of pathogen effectors by host NLR receptors. Previous work has shown that AVRA1 is directly recognized in the cytosol by the immune receptor MLA1. We speculate that the AVRA1 J‐domain target being inside the ER, where it is inapproachable by NLRs, has forced the plant to evolve this challenging direct recognition.
{"title":"Powdery mildew effectors AVRA1 and BEC1016 target the ER J‐domain protein HvERdj3B required for immunity in barley","authors":"Zizhang Li, Valeria Velásquez‐Zapata, J. Mitch Elmore, Xuan Li, Wenjun Xie, Sohini Deb, Xiao Tian, Sagnik Banerjee, Hans J. L. Jørgensen, Carsten Pedersen, Roger P. Wise, Hans Thordal‐Christensen","doi":"10.1111/mpp.13463","DOIUrl":"https://doi.org/10.1111/mpp.13463","url":null,"abstract":"The barley powdery mildew fungus, <jats:italic>Blumeria hordei</jats:italic> (Bh), secretes hundreds of candidate secreted effector proteins (CSEPs) to facilitate pathogen infection and colonization. One of these, CSEP0008, is directly recognized by the barley nucleotide‐binding leucine‐rich‐repeat (NLR) receptor MLA1 and therefore is designated AVR<jats:sub>A1</jats:sub>. Here, we show that AVR<jats:sub>A1</jats:sub> and the sequence‐unrelated Bh effector BEC1016 (CSEP0491) suppress immunity in barley. We used yeast two‐hybrid next‐generation interaction screens (Y2H‐NGIS), followed by binary Y2H and in planta protein–protein interactions studies, and identified a common barley target of AVR<jats:sub>A1</jats:sub> and BEC1016, the endoplasmic reticulum (ER)‐localized J‐domain protein <jats:italic>Hv</jats:italic>ERdj3B. Silencing of this ER quality control (ERQC) protein increased Bh penetration. <jats:italic>Hv</jats:italic>ERdj3B is ER luminal, and we showed using split GFP that AVR<jats:sub>A1</jats:sub> and BEC1016 translocate into the ER signal peptide‐independently. Overexpression of the two effectors impeded trafficking of a vacuolar marker through the ER; silencing of <jats:italic>Hv</jats:italic>ERdj3B also exhibited this same cellular phenotype, coinciding with the effectors targeting this ERQC component. Together, these results suggest that the barley innate immunity, preventing Bh entry into epidermal cells, requires ERQC. Here, the J‐domain protein <jats:italic>Hv</jats:italic>ERdj3B appears to be essential and can be regulated by AVR<jats:sub>A1</jats:sub> and BEC1016. Plant disease resistance often occurs upon direct or indirect recognition of pathogen effectors by host NLR receptors. Previous work has shown that AVR<jats:sub>A1</jats:sub> is directly recognized in the cytosol by the immune receptor MLA1. We speculate that the AVR<jats:sub>A1</jats:sub> J‐domain target being inside the ER, where it is inapproachable by NLRs, has forced the plant to evolve this challenging direct recognition.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"10 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140833684","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The movement of potyviruses, the largest genus of single-stranded, positive-sense RNA viruses responsible for serious diseases in crops, is very complex. As potyviruses developed strategies to hijack the host secretory pathway and plasmodesmata (PD) for their transport, the goal of this study was to identify membrane and/or PD-proteins that interact with the 6K2 protein, a potyviral protein involved in replication and cell-to-cell movement of turnip mosaic virus (TuMV). Using split-ubiquitin membrane yeast two-hybrid assays, we screened an Arabidopsis cDNA library for interactors of TuMV6K2. We isolated AtHVA22a (Hordeum vulgare abscisic acid responsive gene 22), which belongs to a multigenic family of transmembrane proteins, homologous to Receptor expression-enhancing protein (Reep)/Deleted in polyposis (DP1)/Yop1 family proteins in animal and yeast. HVA22/DP1/Yop1 family genes are widely distributed in eukaryotes, but the role of HVA22 proteins in plants is still not well known, although proteomics analysis of PD fractions purified from Arabidopsis suspension cells showed that AtHVA22a is highly enriched in a PD proteome. We confirmed the interaction between TuMV6K2 and AtHVA22a in yeast, as well as in planta by using bimolecular fluorescence complementation and showed that TuMV6K2/AtHVA22a interaction occurs at the level of the viral replication compartment during TuMV infection. Finally, we showed that the propagation of TuMV is increased when AtHVA22a is overexpressed in planta but slowed down upon mutagenesis of AtHVA22a by CRISPR-Cas9. Altogether, our results indicate that AtHVA22a plays an agonistic effect on TuMV propagation and that the C-terminal tail of the protein is important in this process.
{"title":"AtHVA22a, a plant-specific homologue of Reep/DP1/Yop1 family proteins is involved in turnip mosaic virus propagation.","authors":"Mingshuo Xue, Luc Sofer, Vincent Simon, Nathalie Arvy, Mamoudou Diop, Roxane Lion, Guillaume Beucher, Amandine Bordat, Jens Tilsner, Jean-Luc Gallois, Sylvie German-Retana","doi":"10.1111/mpp.13466","DOIUrl":"10.1111/mpp.13466","url":null,"abstract":"<p><p>The movement of potyviruses, the largest genus of single-stranded, positive-sense RNA viruses responsible for serious diseases in crops, is very complex. As potyviruses developed strategies to hijack the host secretory pathway and plasmodesmata (PD) for their transport, the goal of this study was to identify membrane and/or PD-proteins that interact with the 6K2 protein, a potyviral protein involved in replication and cell-to-cell movement of turnip mosaic virus (TuMV). Using split-ubiquitin membrane yeast two-hybrid assays, we screened an Arabidopsis cDNA library for interactors of <sup>TuMV</sup>6K2. We isolated AtHVA22a (Hordeum vulgare abscisic acid responsive gene 22), which belongs to a multigenic family of transmembrane proteins, homologous to Receptor expression-enhancing protein (Reep)/Deleted in polyposis (DP1)/Yop1 family proteins in animal and yeast. HVA22/DP1/Yop1 family genes are widely distributed in eukaryotes, but the role of HVA22 proteins in plants is still not well known, although proteomics analysis of PD fractions purified from Arabidopsis suspension cells showed that AtHVA22a is highly enriched in a PD proteome. We confirmed the interaction between <sup>TuMV</sup>6K2 and AtHVA22a in yeast, as well as in planta by using bimolecular fluorescence complementation and showed that <sup>TuMV</sup>6K2/AtHVA22a interaction occurs at the level of the viral replication compartment during TuMV infection. Finally, we showed that the propagation of TuMV is increased when AtHVA22a is overexpressed in planta but slowed down upon mutagenesis of AtHVA22a by CRISPR-Cas9. Altogether, our results indicate that AtHVA22a plays an agonistic effect on TuMV propagation and that the C-terminal tail of the protein is important in this process.</p>","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"25 5","pages":"e13466"},"PeriodicalIF":4.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11104427/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141065455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Xiaofei Liang, Wei Yu, Yanan Meng, Shengping Shang, Huanhuan Tian, Zhaohui Zhang, Jeffrey A. Rollins, Rong Zhang, Guangyu Sun
Apple Glomerella leaf spot (GLS) is an emerging fungal disease caused by Colletotrichum fructicola and other Colletotrichum species. These species are polyphyletic and it is currently unknown how these pathogens convergently evolved to infect apple. We generated chromosome‐level genome assemblies of a GLS‐adapted isolate and a non‐adapted isolate in C. fructicola using long‐read sequencing. Additionally, we resequenced 17 C. fructicola and C. aenigma isolates varying in GLS pathogenicity using short‐read sequencing. Genome comparisons revealed a conserved bipartite genome architecture involving minichromosomes (accessory chromosomes) shared by C. fructicola and other closely related species within the C. gloeosporioides species complex. Moreover, two repeat‐rich genomic regions (1.61 Mb in total) were specifically conserved among GLS‐pathogenic isolates in C. fructicola and C. aenigma. Single‐gene deletion of 10 accessory genes within the GLS‐specific regions of C. fructicola identified three that were essential for GLS pathogenicity. These genes encoded a putative non‐ribosomal peptide synthetase, a flavin‐binding monooxygenase and a small protein with unknown function. These results highlight the crucial role accessory genes play in the evolution of Colletotrichum pathogenicity and imply the significance of an unidentified secondary metabolite in GLS pathogenesis.
苹果球孢菌叶斑病(GLS)是一种新出现的真菌病害,由 Colletotrichum fructicola 和其他 Colletotrichum 菌种引起。这些物种是多态的,目前还不清楚这些病原体是如何进化到感染苹果的。我们利用长线程测序技术生成了果实疫霉菌中一个适应 GLS 的分离株和一个不适应 GLS 的分离株的染色体组。此外,我们还利用短线程测序技术对 17 个果蝇科 C. 和 C. aenigma 分离物进行了重新测序,这些分离物的 GLS 致病性各不相同。基因组比较显示,果孢子菌和球孢子菌种群中其他密切相关的菌种具有保守的两部分基因组结构,其中包括小染色体(附属染色体)。此外,在 C. fructicola 和 C. aenigma 的 GLS 致病分离株中,有两个重复丰富的基因组区域(共 1.61 Mb)是特别保守的。在 C. fructicola 的 GLS 特异性区域内对 10 个附属基因进行了单基因缺失,发现其中 3 个基因对 GLS 的致病性至关重要。这些基因编码一种假定的非核糖体肽合成酶、一种黄素结合单氧化酶和一种功能未知的小蛋白。这些结果凸显了附属基因在 Colletotrichum 致病性进化过程中发挥的关键作用,并暗示了一种未确定的次生代谢物在 GLS 致病过程中的重要性。
{"title":"Genome comparisons reveal accessory genes crucial for the evolution of apple Glomerella leaf spot pathogenicity in Colletotrichum fungi","authors":"Xiaofei Liang, Wei Yu, Yanan Meng, Shengping Shang, Huanhuan Tian, Zhaohui Zhang, Jeffrey A. Rollins, Rong Zhang, Guangyu Sun","doi":"10.1111/mpp.13454","DOIUrl":"https://doi.org/10.1111/mpp.13454","url":null,"abstract":"Apple Glomerella leaf spot (GLS) is an emerging fungal disease caused by <jats:italic>Colletotrichum fructicola</jats:italic> and other <jats:italic>Colletotrichum</jats:italic> species. These species are polyphyletic and it is currently unknown how these pathogens convergently evolved to infect apple. We generated chromosome‐level genome assemblies of a GLS‐adapted isolate and a non‐adapted isolate in <jats:italic>C. fructicola</jats:italic> using long‐read sequencing. Additionally, we resequenced 17 <jats:italic>C. fructicola</jats:italic> and <jats:italic>C. aenigma</jats:italic> isolates varying in GLS pathogenicity using short‐read sequencing. Genome comparisons revealed a conserved bipartite genome architecture involving minichromosomes (accessory chromosomes) shared by <jats:italic>C. fructicola</jats:italic> and other closely related species within the <jats:italic>C. gloeosporioides</jats:italic> species complex. Moreover, two repeat‐rich genomic regions (1.61 Mb in total) were specifically conserved among GLS‐pathogenic isolates in <jats:italic>C. fructicola</jats:italic> and <jats:italic>C. aenigma</jats:italic>. Single‐gene deletion of 10 accessory genes within the GLS‐specific regions of <jats:italic>C. fructicola</jats:italic> identified three that were essential for GLS pathogenicity. These genes encoded a putative non‐ribosomal peptide synthetase, a flavin‐binding monooxygenase and a small protein with unknown function. These results highlight the crucial role accessory genes play in the evolution of <jats:italic>Colletotrichum</jats:italic> pathogenicity and imply the significance of an unidentified secondary metabolite in GLS pathogenesis.","PeriodicalId":18763,"journal":{"name":"Molecular plant pathology","volume":"61 1","pages":""},"PeriodicalIF":4.9,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140589337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}