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LAG-3 palmitoylation-inducing dysfunction of decidual CD4+T cells is associated with recurrent pregnancy loss. LAG-3棕榈酰化诱导的个体CD4+T细胞功能障碍与复发性妊娠丢失有关。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01361-9
Liyuan Cui, Fengrun Sun, Xinhang Meng, Yujie Luo, Jinfeng Qian, Songcun Wang

Recurrent pregnancy loss (RPL) profoundly impacts not only the physical health but also the psychological well-being of women. Despite its profound effects, the underlying pathophysiological mechanisms of RPL remain largely elusive, with few discernible warning signs. Lymphocyte activation gene-3 (LAG-3) is a crucial immune checkpoint that modulates immune responses during infection and tumor. In the present study, we examined the expression of LAG-3 on CD4+T cells during pregnancy via cytometry by time-of-flight and flow cytometry. Our findings revealed a higher frequency of LAG-3+ decidual CD4+T (dCD4+T) cells in response to trophoblasts during normal pregnancy. This specific LAG-3+ subset of dCD4+T cells was found to produce a greater number of anti-inflammatory cytokines. Notably, blocking LAG-3 was highly effective in inhibiting the production of anti-inflammatory cytokines, which is detrimental to the maintenance of pregnancy. A decrease in the number of LAG-3+dCD4+T cells was correlated with miscarriage. Interestingly, the RNA level of LAG-3 (data analyzed from the two published single-cell databases) remained stable in RPL. Palmitoylation might play a role in regulating LAG-3 expression during RPL, as the palmitoylation of LAG-3+dCD4+T cells was increased in RPL. Additionally, the general palmitoylation inhibitor 2-bromopalmitate was found to upregulate LAG-3 expression on dCD4+T cells both in vitro and in vivo. Collectively, these findings highlighted the significant roles of LAG-3 in regulating the function of dCD4+T cell and maintaining normal pregnancy. Furthermore, they suggested that lower LAG-3 expression on dCD4+T cells could serve as a potential biomarker for diagnosis of RPL.

复发性流产不仅严重影响妇女的身体健康,而且严重影响妇女的心理健康。尽管其影响深远,但RPL的潜在病理生理机制在很大程度上仍然难以捉摸,几乎没有可辨别的警告信号。淋巴细胞活化基因-3 (LAG-3)是一个重要的免疫检查点,在感染和肿瘤期间调节免疫反应。在本研究中,我们通过飞行时间和流式细胞术检测了妊娠期间CD4+T细胞上LAG-3的表达。我们的研究结果显示,在正常妊娠期间,LAG-3+个体CD4+T (dCD4+T)细胞对滋养细胞的反应频率更高。发现dCD4+T细胞的这种特异性LAG-3+亚群产生更多的抗炎细胞因子。值得注意的是,阻断LAG-3在抑制抗炎细胞因子的产生方面非常有效,这不利于妊娠的维持。LAG-3+dCD4+T细胞数量减少与流产相关。有趣的是,LAG-3的RNA水平(来自两个已发表的单细胞数据库的数据分析)在RPL中保持稳定。棕榈酰化可能在RPL中调节LAG-3的表达,因为LAG-3+dCD4+T细胞的棕榈酰化在RPL中升高。此外,在体外和体内均发现一般棕榈酰化抑制剂2-溴铝酸盐上调dCD4+T细胞上LAG-3的表达。总之,这些发现突出了LAG-3在调节dCD4+T细胞功能和维持正常妊娠中的重要作用。此外,他们认为dCD4+T细胞上较低的LAG-3表达可以作为诊断RPL的潜在生物标志物。
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引用次数: 0
APP SUMOylation prevents BACE1 cleavage of APP and increases BACE1 degradation to promote the nonamyloidogenic pathway. APP summoylation阻止BACE1切割APP,增加BACE1降解,促进非淀粉样变性途径。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01354-8
Yen-Chen Liu, Wei-Lun Hsu, Yun-Li Ma, Chung-Yao Yin, Kuang-Min Cheng, Eminy H Y Lee
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引用次数: 0
Fundamental prognostic difference of ATM gene mutation and deletion in newly diagnosed mantle cell lymphoma. ATM基因突变与缺失对新诊断套细胞淋巴瘤预后的影响。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01376-2
Ales Obr, Diana Malarikova, Eva Kriegova, Helena Urbankova, Zuzana Zemanova, Jirina Manakova, Anna Petrackova, Michaela Vatolikova, Adela Berkova, Kristina Forsterova, Tomas Furst, Andrea Hruskova, Patrik Flodr, Veronika Hanackova, Vit Prochazka, Tomas Papajik, Marek Trneny, Pavel Klener

Background: Previous studies have suggested that, after acquisition of t(11;14), mantle cell lymphoma (MCL) pathogenesis may proceed via several different genetic second hits, which may shape different mutational profiles of clinically manifest lymphoma. The most prevalent second hit in MCL includes ATM aberrations, accounting for about half of patients with newly diagnosed MCL. As ATM and TP53 mutations tend to be exclusive in MCL, we retrospectively analyzed the prognostic role of ATM deletions and/or mutations in patients with newly diagnosed MCL, both in the entire cohort and in a subcohort of patients with wild-type TP53.

Methods: To investigate deletions and mutations of ATM and TP53 in newly diagnosed MCL, we used fluorescence in situ hybridization and next-generation sequencing. To assess relationships between variables, non-parametric (Spearman) and chi-square tests were used. The Kruskal-Wallis test was used to analyze differences in continuous variables between two groups of patients. For survival analyses, the standard Kaplan-Meier estimator and log-rank test were employed. Univariate and multivariate Cox proportional hazard models were used to examine the prognostic value of various factors on patient survival.

Results: We analyzed 187 patients with MCL (a median follow-up of 3.6 years). Eighty-one (43%) and 75 (40%) patients had ATM and TP53 aberrations, respectively. Of note, three (9%) patients with mutated ATM harbored a germline mutation. Patients with TP53 aberration had shorter survival rates. Although ATM deletion did not correlate with progression-free survival (PFS) in the entire cohort, it was associated with shorter PFS (hazard ratio 2.25, p = 0.01) in patients with wild-type TP53. A higher frequency of ATM deletion correlated with shorter PFS. Patients with ATM mutation (and wild-type TP53) had a trend toward better PFS (albeit not statistically significant). Moreover, patients with a higher variant allele frequency of ATM mutation tended to have longer PFS.

Conclusions: ATM deletion is an important predictor of prognosis in MCL patients and should be routinely examined, especially in those with wild-type TP53. In contrast, an isolated ATM mutation may predict a better prognosis in the context of standard immunochemotherapy.

背景:先前的研究表明,在获得t(11;14)后,套细胞淋巴瘤(MCL)的发病可能通过几种不同的遗传二次命中进行,这可能形成临床表现淋巴瘤的不同突变谱。MCL中最常见的二次打击包括ATM畸变,约占新诊断MCL患者的一半。由于ATM和TP53突变在MCL中往往是排他的,我们回顾性分析了ATM缺失和/或突变在新诊断的MCL患者中的预后作用,包括整个队列和野生型TP53患者的亚队列。方法:采用荧光原位杂交技术和新一代测序技术研究新诊断MCL中ATM和TP53基因的缺失和突变。为了评估变量之间的关系,使用了非参数(Spearman)检验和卡方检验。采用Kruskal-Wallis检验分析两组患者连续变量的差异。生存分析采用标准Kaplan-Meier估计量和log-rank检验。采用单因素和多因素Cox比例风险模型检验各因素对患者生存的预后价值。结果:我们分析了187例MCL患者(中位随访3.6年)。ATM和TP53异常分别为81例(43%)和75例(40%)。值得注意的是,3例(9%)ATM突变患者携带种系突变。TP53异常的患者生存率较短。尽管在整个队列中,ATM缺失与无进展生存期(PFS)无关,但在野生型TP53患者中,它与较短的PFS相关(风险比2.25,p = 0.01)。较高的ATM删除频率与较短的PFS相关。ATM突变(和野生型TP53)的患者有更好的PFS的趋势(尽管没有统计学意义)。此外,ATM突变等位基因变异频率高的患者PFS较长。结论:ATM缺失是MCL患者预后的重要预测因子,应常规检查,尤其是野生型TP53患者。相比之下,在标准免疫化疗的背景下,孤立的ATM突变可能预示着更好的预后。
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引用次数: 0
Selective inhibition of BRAF and CRAF sensitizes NF1-deficient malignant peripheral nerve sheath tumors to MEK inhibitors. 选择性抑制BRAF和CRAF使nf1缺陷的恶性周围神经鞘肿瘤对MEK抑制剂敏感。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01353-9
Jiawan Wang, Arnab Sarkar, Natalia Garcia, Lindy Zhang, Ana Calizo, Alla Lisok, Katia Campos, Funan He, Nishanth Punjaala, Teresa Marple, Kai Pollard, Siyuan Zheng, Calixto-Hope G Lucas, Vesselina G Cooke, Christine A Pratilas, Angelina V Vaseva
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引用次数: 0
Functional characterization of the MED12 p.Arg1138Trp variant in females: implications for neural development and disease mechanism. 女性MED12 p.a g1138trp变异的功能特征:对神经发育和疾病机制的影响
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01365-5
Nicole C Shaw, Saraya Harrison, Kevin Chen, Catherine A Forbes, Emma Kuzminski, Mitchell Hedges, Kathryn O Farley, Michelle Ward, Lily Loughman, Cathryn Poulton, Gareth Baynam, Timo Lassmann, Vanessa S Fear

Background: Seven female individuals with multiple congenital anomalies, developmental delay and/or intellectual disability have been found to have a genetic variant of uncertain significance in the mediator complex subunit 12 gene (MED12 c.3412C>T, p.Arg1138Trp). The functional consequence of this genetic variant in disease is undetermined, and insight into disease mechanism is required.

Methods: We identified a de novo MED12 p.Arg1138Trp variant in a female patient and compared disease phenotypes with six female individuals identified in the literature. To investigate affected biological pathways, we derived two induced pluripotent stem cell (iPSC) lines from the patient: one expressing wildtype MED12 and the other expressing the MED12 p.Arg1138Trp variant. We performed neural disease modelling, transcriptomics and protein analysis, comparing healthy and variant cells.

Results: When comparing the two cell lines, we identified altered gene expression in neural cells expressing the variant, including genes regulating RNA polymerase II activity, transcription, pre-mRNA processing, and neural development. We also noted a decrease in MED12L expression. Pathway analysis indicated temporal delays in axon development, forebrain differentiation, and neural cell specification with significant upregulation of pre-ribosome complex gene pathways.

Conclusion: In a human neural model, expression of MED12 p.Arg1138Trp altered neural cell development and dysregulated the pre-ribosome complex providing functional evidence of disease aetiology and mechanism in MED12-related disorders.

背景:7名患有多种先天性异常、发育迟缓和/或智力残疾的女性个体被发现在中介复合物亚基12基因(MED12 c.3412C>T, p.a g1138trp)中具有不确定意义的遗传变异。这种遗传变异在疾病中的功能后果尚不确定,需要深入了解疾病机制。方法:我们在一名女性患者中发现了一种新的MED12 p.a g1138trp变异,并将其与文献中发现的6名女性个体的疾病表型进行了比较。为了研究受影响的生物学途径,我们从患者身上获得了两种诱导多能干细胞(iPSC)系:一种表达MED12野生型,另一种表达MED12 p.a g1138trp变体。我们进行了神经疾病建模、转录组学和蛋白质分析,比较了健康细胞和变异细胞。结果:在比较两种细胞系时,我们发现了表达该变体的神经细胞中基因表达的改变,包括调节RNA聚合酶II活性、转录、前mrna加工和神经发育的基因。我们还注意到MED12L的表达减少。通路分析显示轴突发育、前脑分化和神经细胞分化的时间延迟,核糖体前复合物基因通路显著上调。结论:在人类神经模型中,MED12 p.a g1138trp的表达改变了神经细胞的发育并失调了前核糖体复合物,为MED12相关疾病的病因和机制提供了功能证据。
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引用次数: 0
Genomic medicine in hepatology: mechanisms and liver treatment strategies. 肝病学中的基因组医学:机制和肝脏治疗策略。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01358-4
D S Kozlov, S Rodimova, P Filatov, A Mozherov, P S Timashev, M V Zyuzin, D S Kuznetsova
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引用次数: 0
Targeting galectin-3 in cancer by novel and unique inhibitors of non-carbohydrate origin. 通过新颖独特的非碳水化合物抑制剂靶向半乳糖凝集素-3治疗癌症。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01356-6
Paulina Sindrewicz-Goral, Xiaoxin Li, Weikun Wang, Oluwatobi Adegbite, Yaoyu Pang, Thomas Gledhill, Sandra Sreenivas, Lu-Yun Lian, Lu-Gang Yu

The galactoside-binding galectin-3 is a multi-mode promoter in a broad range of cancers, as well as in the pathogenesis of inflammation and fibrosis-associated diseases. It is currently a hotly pursued therapeutic target in those disease areas. Several carbohydrate-based galectin-3 inhibitors have recently demonstrated encouraging results in early phase clinical trials. This study reports the discovery of two synthetic, non-carbohydrate, small molecule compounds (named K2 an L2) as potent galectin-3 inhibitors. K2 and L2 share the same molecular composition with difference of one -NH2 group located at para (K2) or meta (L2) position at one of its aromatic rings. These novel compound inhibitors were shown to bind to galectin-3 on the canonical S-face of galectin-3 carbohydrate-recognition domain. Their binding was shown to alter galectin-3 conformation and significantly inhibit galectin-3-mediated activities in cancer cell adhesion, invasion, angiogenesis and macrophage secretion of pro-inflammatory cytokines min vitro, and markedly reduce galectin-3-mediated tumour growth and metastasis in vivo in mice as well as in chick embryos. Moreover, these novel galectin-3 inhibitors showed no detectable cytotoxicity and no genotoxicity. K2 and L2 therefore represent a unique class of novel galectin-3 inhibitors that can effectively inhibit galectin-3-mediated activities in vitro and in vivo. The discovery of these non-carbohydrate galectin-3 inhibitors offers significant promises to the development of galectin-3-targeted therapeutic drugs for the treatment of cancer and other galectin-3-mediated pathologies such as inflammation and fibrosis-associated diseases.

半乳糖苷结合半乳糖凝集素-3是多种癌症以及炎症和纤维化相关疾病发病机制中的多模式启动子。目前在这些疾病领域,它是一个热门的治疗靶点。几种基于碳水化合物的半乳糖凝集素-3抑制剂最近在早期临床试验中显示出令人鼓舞的结果。本研究报告发现了两种合成的非碳水化合物小分子化合物(命名为K2和L2)作为有效的半乳糖凝集素-3抑制剂。K2和L2具有相同的分子组成,不同的是-NH2基团位于其中一个芳环的para (K2)或meta (L2)位置。这些新型化合物抑制剂在半乳糖凝集素-3碳水化合物识别结构域的典型s面与半乳糖凝集素-3结合。它们的结合改变了半乳糖凝集素-3的构象,在体外显著抑制半乳糖凝集素-3介导的癌细胞粘附、侵袭、血管生成和巨噬细胞分泌促炎细胞因子的活性,并在小鼠和鸡胚胎中显著降低半乳糖凝集素-3介导的肿瘤生长和转移。此外,这些新型半乳糖凝集素-3抑制剂没有可检测到的细胞毒性和遗传毒性。因此,K2和L2代表了一类独特的新型半乳糖凝集素-3抑制剂,可以在体外和体内有效地抑制半乳糖凝集素-3介导的活性。这些非碳水化合物半乳糖凝集素-3抑制剂的发现为半乳糖凝集素-3靶向治疗药物的开发提供了重要的希望,这些药物可用于治疗癌症和其他半乳糖凝集素-3介导的病理,如炎症和纤维化相关疾病。
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引用次数: 0
EPO-modified bone marrow MSCs alleviate asthma inflammation through enhanced mitochondrial activation and transfer by upregulating HO-1. epo修饰的骨髓间充质干细胞通过上调HO-1增强线粒体激活和转移来减轻哮喘炎症。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-29 DOI: 10.1186/s10020-025-01371-7
Yao Zhang, Li-Zhan Chen, Hai-Feng Ou-Yang
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引用次数: 0
Secreted AZGP1 induced by 5-FU binds to PD-L1 and promotes apoptosis in cholangiocarcinoma. 5-FU诱导分泌AZGP1与PD-L1结合,促进胆管癌细胞凋亡。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-26 DOI: 10.1186/s10020-025-01362-8
Ji-Eun You, Do Yeon Kim, Hyeseon Yun, Dong-In Koh, Yea Seong Ryu, Dong-Hoon Jin
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引用次数: 0
Porphyromonas gingivalis promotes the formation and development of type 2 diabetes mellitus complicated with cognitive impairment by regulating gut microbiota and metabolic pathways. 牙龈卟啉单胞菌通过调节肠道菌群和代谢途径促进2型糖尿病合并认知功能障碍的形成和发展。
IF 6.4 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-26 DOI: 10.1186/s10020-025-01342-y
Xin Liu, Keke Che, Qiaoli Li, Xiuli Wu, Dong Zeng, Xiaoli Du, Shanglan Qing
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引用次数: 0
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Molecular Medicine
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