Pub Date : 2025-01-08DOI: 10.1038/s41591-024-03458-w
Remy Dulery, Vincent Guiraud, Sylvain Choquet, Catherine Thieblemont, Emmanuel Bachy, Stéphane Barete, Ève Todesco, Bertrand Arnulf, Nicolas Boissel, André Baruchel, Jacques-Olivier Bay, Steven Le Gouill, Roch Houot
The risk of T cell malignancies after chimeric antigen receptor (CAR) T cell therapy is a concern, although the true incidence remains unclear. Here we analyzed the DESCAR-T registry database, encompassing all pediatric and adult patients with hematologic malignancies who received CAR T cell therapy in France since 1 July 2018. Of the 3,066 patients included (2,536 B cell lymphoma, 162 B cell acute lymphoblastic leukemia (ALL) and 368 multiple myeloma), 1,680 (54.8%) received axicabtagene ciloleucel, 205 (6.7%) brexucabtagene autoleucel, 44 (1.4%) lisocabtagene maraleucel and 769 (25.1%) tisagenlecleucel. All multiple myeloma patients received idecabtagene vicleucel, with none receiving ciltacabtagene autoleucel. After a median follow-up of 12.7 months for B cell lymphoma, 17.7 months for B cell ALL and 6.3 months for multiple myeloma, only one (0.03%) patient developed a T cell malignancy after CAR T infusion. Specifically, the patient was diagnosed with a primary cutaneous CD30+ T cell lymphoproliferative disorder (anaplastic lymphoma kinase-negative) 3 years after receiving tisagenlecleucel therapy for diffuse large B cell lymphoma. This was associated with the integration of a CAR clone into the tumor suppressor gene PLAAT4 (phospholipase A and acyltransferase 4). Thus, the development of this secondary T cell malignancy might be linked to the use of CAR T cell therapy. In conclusion, our findings indicate a very low risk of T cell malignancy after CAR T cell therapy.
{"title":"T cell malignancies after CAR T cell therapy in the DESCAR-T registry","authors":"Remy Dulery, Vincent Guiraud, Sylvain Choquet, Catherine Thieblemont, Emmanuel Bachy, Stéphane Barete, Ève Todesco, Bertrand Arnulf, Nicolas Boissel, André Baruchel, Jacques-Olivier Bay, Steven Le Gouill, Roch Houot","doi":"10.1038/s41591-024-03458-w","DOIUrl":"https://doi.org/10.1038/s41591-024-03458-w","url":null,"abstract":"<p>The risk of T cell malignancies after chimeric antigen receptor (CAR) T cell therapy is a concern, although the true incidence remains unclear. Here we analyzed the DESCAR-T registry database, encompassing all pediatric and adult patients with hematologic malignancies who received CAR T cell therapy in France since 1 July 2018. Of the 3,066 patients included (2,536 B cell lymphoma, 162 B cell acute lymphoblastic leukemia (ALL) and 368 multiple myeloma), 1,680 (54.8%) received axicabtagene ciloleucel, 205 (6.7%) brexucabtagene autoleucel, 44 (1.4%) lisocabtagene maraleucel and 769 (25.1%) tisagenlecleucel. All multiple myeloma patients received idecabtagene vicleucel, with none receiving ciltacabtagene autoleucel. After a median follow-up of 12.7 months for B cell lymphoma, 17.7 months for B cell ALL and 6.3 months for multiple myeloma, only one (0.03%) patient developed a T cell malignancy after CAR T infusion. Specifically, the patient was diagnosed with a primary cutaneous CD30<sup>+</sup> T cell lymphoproliferative disorder (anaplastic lymphoma kinase-negative) 3 years after receiving tisagenlecleucel therapy for diffuse large B cell lymphoma. This was associated with the integration of a CAR clone into the tumor suppressor gene <i>PLAAT4</i> (phospholipase A and acyltransferase 4). Thus, the development of this secondary T cell malignancy might be linked to the use of CAR T cell therapy. In conclusion, our findings indicate a very low risk of T cell malignancy after CAR T cell therapy.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"20 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142936142","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The delivery of accurate diagnoses is crucial in healthcare and represents the gateway to appropriate and timely treatment. Although recent large language models (LLMs) have demonstrated impressive capabilities in few-shot or zero-shot learning, their effectiveness in clinical diagnosis remains unproven. Here we present MedFound, a generalist medical language model with 176 billion parameters, pre-trained on a large-scale corpus derived from diverse medical text and real-world clinical records. We further fine-tuned MedFound to learn physicians’ inferential diagnosis with a self-bootstrapping strategy-based chain-of-thought approach and introduced a unified preference alignment framework to align it with standard clinical practice. Extensive experiments demonstrate that our medical LLM outperforms other baseline LLMs and specialized models in in-distribution (common diseases), out-of-distribution (external validation) and long-tailed distribution (rare diseases) scenarios across eight specialties. Further ablation studies indicate the effectiveness of key components in our medical LLM training approach. We conducted a comprehensive evaluation of the clinical applicability of LLMs for diagnosis involving artificial intelligence (AI) versus physician comparison, AI-assistance study and human evaluation framework. Our proposed framework incorporates eight clinical evaluation metrics, covering capabilities such as medical record summarization, diagnostic reasoning and risk management. Our findings demonstrate the model’s feasibility in assisting physicians with disease diagnosis as part of the clinical workflow.
{"title":"A generalist medical language model for disease diagnosis assistance","authors":"Xiaohong Liu, Hao Liu, Guoxing Yang, Zeyu Jiang, Shuguang Cui, Zhaoze Zhang, Huan Wang, Liyuan Tao, Yongchang Sun, Zhu Song, Tianpei Hong, Jin Yang, Tianrun Gao, Jiangjiang Zhang, Xiaohu Li, Jing Zhang, Ye Sang, Zhao Yang, Kanmin Xue, Song Wu, Ping Zhang, Jian Yang, Chunli Song, Guangyu Wang","doi":"10.1038/s41591-024-03416-6","DOIUrl":"https://doi.org/10.1038/s41591-024-03416-6","url":null,"abstract":"<p>The delivery of accurate diagnoses is crucial in healthcare and represents the gateway to appropriate and timely treatment. Although recent large language models (LLMs) have demonstrated impressive capabilities in few-shot or zero-shot learning, their effectiveness in clinical diagnosis remains unproven. Here we present MedFound, a generalist medical language model with 176 billion parameters, pre-trained on a large-scale corpus derived from diverse medical text and real-world clinical records. We further fine-tuned MedFound to learn physicians’ inferential diagnosis with a self-bootstrapping strategy-based chain-of-thought approach and introduced a unified preference alignment framework to align it with standard clinical practice. Extensive experiments demonstrate that our medical LLM outperforms other baseline LLMs and specialized models in in-distribution (common diseases), out-of-distribution (external validation) and long-tailed distribution (rare diseases) scenarios across eight specialties. Further ablation studies indicate the effectiveness of key components in our medical LLM training approach. We conducted a comprehensive evaluation of the clinical applicability of LLMs for diagnosis involving artificial intelligence (AI) versus physician comparison, AI-assistance study and human evaluation framework. Our proposed framework incorporates eight clinical evaluation metrics, covering capabilities such as medical record summarization, diagnostic reasoning and risk management. Our findings demonstrate the model’s feasibility in assisting physicians with disease diagnosis as part of the clinical workflow.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"82 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142936183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-08DOI: 10.1038/d41591-025-00001-3
Satellite data assessing residential greenness across Italy indicate that thousands of deaths could be prevented by greening residential areas.
评估意大利各地住宅绿化情况的卫星数据表明,绿化住宅区可以避免数千人死亡。
{"title":"Green cities for better health","authors":"","doi":"10.1038/d41591-025-00001-3","DOIUrl":"https://doi.org/10.1038/d41591-025-00001-3","url":null,"abstract":"Satellite data assessing residential greenness across Italy indicate that thousands of deaths could be prevented by greening residential areas.","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"204 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142937535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-08DOI: 10.1038/s41591-024-03455-z
KRAS mutations are ubiquitous in pancreatic adenocarcinomas (PDACs) and are associated with poor outcomes. We leveraged a cohort of 2,336 PDAC tumors to characterize genomic subtypes and their prognostic correlates across clinical stages. A key finding is that shallow copy gains in KRAS mutant alleles are common and indicate unfavorable prognosis.
{"title":"Not all KRAS-mutated pancreatic cancers are equal — mutant dosage matters","authors":"","doi":"10.1038/s41591-024-03455-z","DOIUrl":"https://doi.org/10.1038/s41591-024-03455-z","url":null,"abstract":"KRAS mutations are ubiquitous in pancreatic adenocarcinomas (PDACs) and are associated with poor outcomes. We leveraged a cohort of 2,336 PDAC tumors to characterize genomic subtypes and their prognostic correlates across clinical stages. A key finding is that shallow copy gains in KRAS mutant alleles are common and indicate unfavorable prognosis.","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"37 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142936141","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/s41591-024-03428-2
Caroline Moreau, Pascal Odou, Julien Labreuche, Alexandre Demailly, Gustavo Touzet, Nicolas Reyns, Bastien Gouges, Alain Duhamel, Christine Barthelemy, Damien Lannoy, Natacha Carta, Benjamin Palas, Michèle Vasseur, Felix Marchand, Thomas Ollivier, Céline Leclercq, Camille Potey, Thavarak Ouk, Simon Baigne, Kathy Dujardin, Louise Carton, Anne Sophie Rolland, Jean Christophe Devedjian, Véronique Foutel, Dominique Deplanque, Matthieu Fisichella, David Devos
Continuous compensation for cerebral dopamine deficiency represents an ideal treatment for Parkinson’s disease. Dopamine does not cross the digestive and blood–brain barriers and is rapidly oxidized. The new concept is the intracerebroventricular administration of anaerobic dopamine (A-dopamine) using an abdominal pump connected to a subcutaneous catheter implanted in the third ventricle, near the striatum. An open-label phase 1 study showed no serious adverse reactions induced by A-dopamine in 12 patients. A randomized, controlled, open-label, crossover phase 2 study of 1 month of A-dopamine versus 1 month of optimized oral antiparkinsonian therapy was conducted in 9 patients. The primary endpoint, a blinded assessment of the percentage over target (that is, time with dyskinesia or bradykinesia), recorded by home actimetry using a wristwatch, was significantly reduced on A-dopamine compared with that on oral treatment alone (P = 0.027), with a median within-patient difference of −10.4 (Hedge g = −0.62 (95% confidence interval: −1.43, −0.08)). Home diaries were also significantly improved. These initial data on the feasibility, safety and effects of this new device-assisted therapy suggest validation by a large randomized double-blind trial. ClinicalTrials.gov registration: NCT04332276.
{"title":"Intracerebroventricular anaerobic dopamine in Parkinson’s disease with l-dopa-related complications: a phase 1/2 randomized-controlled trial","authors":"Caroline Moreau, Pascal Odou, Julien Labreuche, Alexandre Demailly, Gustavo Touzet, Nicolas Reyns, Bastien Gouges, Alain Duhamel, Christine Barthelemy, Damien Lannoy, Natacha Carta, Benjamin Palas, Michèle Vasseur, Felix Marchand, Thomas Ollivier, Céline Leclercq, Camille Potey, Thavarak Ouk, Simon Baigne, Kathy Dujardin, Louise Carton, Anne Sophie Rolland, Jean Christophe Devedjian, Véronique Foutel, Dominique Deplanque, Matthieu Fisichella, David Devos","doi":"10.1038/s41591-024-03428-2","DOIUrl":"https://doi.org/10.1038/s41591-024-03428-2","url":null,"abstract":"<p>Continuous compensation for cerebral dopamine deficiency represents an ideal treatment for Parkinson’s disease. Dopamine does not cross the digestive and blood–brain barriers and is rapidly oxidized. The new concept is the intracerebroventricular administration of anaerobic dopamine (A-dopamine) using an abdominal pump connected to a subcutaneous catheter implanted in the third ventricle, near the striatum. An open-label phase 1 study showed no serious adverse reactions induced by A-dopamine in 12 patients. A randomized, controlled, open-label, crossover phase 2 study of 1 month of A-dopamine versus 1 month of optimized oral antiparkinsonian therapy was conducted in 9 patients. The primary endpoint, a blinded assessment of the percentage over target (that is, time with dyskinesia or bradykinesia), recorded by home actimetry using a wristwatch, was significantly reduced on A-dopamine compared with that on oral treatment alone (<i>P</i> = 0.027), with a median within-patient difference of −10.4 (Hedge <i>g</i> = −0.62 (95% confidence interval: −1.43, −0.08)). Home diaries were also significantly improved. These initial data on the feasibility, safety and effects of this new device-assisted therapy suggest validation by a large randomized double-blind trial. ClinicalTrials.gov registration: NCT04332276.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"7 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142934700","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/s41591-024-03419-3
Yeming Wang, Hong Wang, Yu Zhang, Anlin Ma, Dong Liu, Xiaoguang Li, Guoru Yang, Min Deng, Shaofang Wang, Yuanyuan Liu, Chuanmiao Liu, Fangqi Ge, Sikui Wang, Yunsong Yu, Ganzhu Feng, Zuke Xiao, Xing Li, Yilan Sun, Xuyan Chen, Zhaolong Cao, Yan Ding, Xiaoping Wu, Jun Wei, Bin Cao
Suraxavir marboxil (GP681) is an antiviral drug inhibiting the polymerase acidic protein (PA) of RNA polymerase, of influenza. It has shown therapeutic activity against influenza A and B virus infections in preclinical studies. In this multicenter randomized, double-blind, placebo-controlled, phase 3 trial, we aimed to investigate the efficacy and safety of single-dose suraxavir marboxil (40-mg oral dose) in otherwise healthy outpatients aged 5–65 years with uncomplicated influenza unaccompanied by severe issues. From 28 July 2022 to 31 October 2023, 591 outpatients aged 5–65 years with uncomplicated influenza underwent randomization in 46 research centers in China and were randomly assigned in a 2:1 ratio to receive suraxavir marboxil (40 mg) or placebo within 2 days of symptom onset. The primary outcome was time to alleviation of influenza symptoms (TTAS) (from the start of treatment until body temperature returned to 37.2 °C or less and all seven influenza symptoms (cough, sore throat, headache, nasal congestion, feverishness or chills, muscle or joint pain, and fatigue) resolved for at least 21.5 h) within 15 days by treatment. The secondary endpoints included virological indicators, system and respiratory symptoms, PA variant mutation and adverse events. The median TTAS was significantly shorter in the group that received suraxavir marboxil compared to the placebo group (42.0 h versus 63.0 h, P = 0.002). Suraxavir marboxil was associated with more rapid decrease in viral load from baseline than placebo by 1 day after administration, with a mean change of −2.2 ± 1.3 compared to −1.3 ± 1.7 log10 copies per ml (P < 0.001) in the placebo group. Adverse events were reported in 28.4% (112 of 395) of suraxavir marboxil recipients and 23.3% (45 of 193) of placebo recipients, most of which were mild or moderate. The incidences of PA variants with the I38T mutation in the H1N1pdm and H3N2 subtypes were 0.7% (1 of 138) and 0.9% (2 of 213), respectively. Low acquired drug resistance was observed. In this trial, timely single-dose suraxavir marboxil was effective in shortening TTAS and reducing the influenza viral load in patients aged 5–65 years with uncomplicated influenza safely. ClinicalTrials.gov registration: NCT05474755.
苏拉韦马博西(GP681)是一种抑制流感病毒RNA聚合酶聚合酶酸性蛋白(PA)的抗病毒药物。在临床前研究中,它已显示出对甲型和乙型流感病毒感染的治疗活性。在这项多中心随机、双盲、安慰剂对照的3期试验中,我们旨在研究单剂量苏拉韦马博西(口服剂量40毫克)对5-65岁无严重并发症的流感门诊健康患者的疗效和安全性。从2022年7月28日至2023年10月31日,中国46个研究中心对591名5-65岁无并发症流感门诊患者进行了随机分组,并按2:1的比例随机分配,在症状出现2天内接受舒沙韦(40mg)或安慰剂治疗。主要终点是流感症状(TTAS)缓解的时间(从治疗开始到体温恢复到37.2°C或更低,并且所有七种流感症状(咳嗽、喉咙痛、头痛、鼻塞、发烧或发冷、肌肉或关节疼痛和疲劳)在治疗15天内缓解至少21.5小时)。次要终点包括病毒学指标、系统和呼吸道症状、PA变异突变和不良事件。接受舒沙韦马博西组的中位TTAS明显短于安慰剂组(42.0 h vs 63.0 h, P = 0.002)。在给药后1天,Suraxavir marboxil的病毒载量比安慰剂更快地从基线下降,平均变化为- 2.2±1.3,而安慰剂组为- 1.3±1.7 log10拷贝/ ml (P < 0.001)。不良事件的报告在28.4%(395例中的112例)和23.3%(193例中的45例)的安慰剂患者中,大多数为轻度或中度。在H1N1pdm和H3N2亚型中,携带I38T突变的PA变异发生率分别为0.7%(138 / 1)和0.9%(213 / 2)。获得性耐药程度低。在本试验中,及时单剂量苏拉韦马博西可有效缩短5-65岁无并发症流感患者的TTAS并安全降低流感病毒载量。ClinicalTrials.gov注册:NCT05474755。
{"title":"Single-dose suraxavir marboxil for acute uncomplicated influenza in adults and adolescents: a multicenter, randomized, double-blind, placebo-controlled phase 3 trial","authors":"Yeming Wang, Hong Wang, Yu Zhang, Anlin Ma, Dong Liu, Xiaoguang Li, Guoru Yang, Min Deng, Shaofang Wang, Yuanyuan Liu, Chuanmiao Liu, Fangqi Ge, Sikui Wang, Yunsong Yu, Ganzhu Feng, Zuke Xiao, Xing Li, Yilan Sun, Xuyan Chen, Zhaolong Cao, Yan Ding, Xiaoping Wu, Jun Wei, Bin Cao","doi":"10.1038/s41591-024-03419-3","DOIUrl":"https://doi.org/10.1038/s41591-024-03419-3","url":null,"abstract":"<p>Suraxavir marboxil (GP681) is an antiviral drug inhibiting the polymerase acidic protein (PA) of RNA polymerase, of influenza. It has shown therapeutic activity against influenza A and B virus infections in preclinical studies. In this multicenter randomized, double-blind, placebo-controlled, phase 3 trial, we aimed to investigate the efficacy and safety of single-dose suraxavir marboxil (40-mg oral dose) in otherwise healthy outpatients aged 5–65 years with uncomplicated influenza unaccompanied by severe issues. From 28 July 2022 to 31 October 2023, 591 outpatients aged 5–65 years with uncomplicated influenza underwent randomization in 46 research centers in China and were randomly assigned in a 2:1 ratio to receive suraxavir marboxil (40 mg) or placebo within 2 days of symptom onset. The primary outcome was time to alleviation of influenza symptoms (TTAS) (from the start of treatment until body temperature returned to 37.2 °C or less and all seven influenza symptoms (cough, sore throat, headache, nasal congestion, feverishness or chills, muscle or joint pain, and fatigue) resolved for at least 21.5 h) within 15 days by treatment. The secondary endpoints included virological indicators, system and respiratory symptoms, PA variant mutation and adverse events. The median TTAS was significantly shorter in the group that received suraxavir marboxil compared to the placebo group (42.0 h versus 63.0 h, <i>P</i> = 0.002). Suraxavir marboxil was associated with more rapid decrease in viral load from baseline than placebo by 1 day after administration, with a mean change of −2.2 ± 1.3 compared to −1.3 ± 1.7 log<sub>10</sub> copies per ml (<i>P</i> < 0.001) in the placebo group. Adverse events were reported in 28.4% (112 of 395) of suraxavir marboxil recipients and 23.3% (45 of 193) of placebo recipients, most of which were mild or moderate. The incidences of PA variants with the I38T mutation in the H1N1pdm and H3N2 subtypes were 0.7% (1 of 138) and 0.9% (2 of 213), respectively. Low acquired drug resistance was observed. In this trial, timely single-dose suraxavir marboxil was effective in shortening TTAS and reducing the influenza viral load in patients aged 5–65 years with uncomplicated influenza safely. ClinicalTrials.gov registration: NCT05474755.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"35 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142934754","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/s41591-024-03407-7
Irene Muñoz-Blat, Raúl Pérez-Moraga, Nerea Castillo-Marco, Teresa Cordero, Ana Ochando, Sheila Ortega-Sanchís, Marcos Parras, Rogelio Monfort-Ortiz, Elena Satorres-Perez, Blanca Novillo, Alfredo Perales, Matthew Gormley, Sofia Granados-Aparici, Rosa Noguera, Beatriz Roson, Susan J. Fisher, Carlos Simón, Tamara Garrido-Gómez
Endometrial decidualization resistance (DR) is implicated in various gynecological and obstetric conditions. Here, using a multi-omic strategy, we unraveled the cellular and molecular characteristics of DR in patients who have suffered severe preeclampsia (sPE). Morphological analysis unveiled significant glandular anatomical abnormalities, confirmed histologically and quantified by the digitization of hematoxylin and eosin-stained tissue sections. Single-cell RNA sequencing (scRNA-seq) of endometrial samples from patients with sPE (n = 11) and controls (n = 12) revealed sPE-associated shifts in cell composition, manifesting as a stromal mosaic state characterized by proliferative stromal cells (MMP11 and SFRP4) alongside IGFBP1+ decidualized cells, with concurrent epithelial mosaicism and a dearth of epithelial–stromal transition associated with decidualization. Cell–cell communication network mapping underscored aberrant crosstalk among specific cell types, implicating crucial pathways such as endoglin, WNT and SPP1. Spatial transcriptomics in a replication cohort validated DR-associated features. Laser capture microdissection/mass spectrometry in a second replication cohort corroborated several scRNA-seq findings, notably the absence of stromal to epithelial transition at a pathway level, indicating a disrupted response to steroid hormones, particularly estrogens. These insights shed light on potential molecular mechanisms underpinning DR pathogenesis in the context of sPE.
{"title":"Multi-omics-based mapping of decidualization resistance in patients with a history of severe preeclampsia","authors":"Irene Muñoz-Blat, Raúl Pérez-Moraga, Nerea Castillo-Marco, Teresa Cordero, Ana Ochando, Sheila Ortega-Sanchís, Marcos Parras, Rogelio Monfort-Ortiz, Elena Satorres-Perez, Blanca Novillo, Alfredo Perales, Matthew Gormley, Sofia Granados-Aparici, Rosa Noguera, Beatriz Roson, Susan J. Fisher, Carlos Simón, Tamara Garrido-Gómez","doi":"10.1038/s41591-024-03407-7","DOIUrl":"https://doi.org/10.1038/s41591-024-03407-7","url":null,"abstract":"<p>Endometrial decidualization resistance (DR) is implicated in various gynecological and obstetric conditions. Here, using a multi-omic strategy, we unraveled the cellular and molecular characteristics of DR in patients who have suffered severe preeclampsia (sPE). Morphological analysis unveiled significant glandular anatomical abnormalities, confirmed histologically and quantified by the digitization of hematoxylin and eosin-stained tissue sections. Single-cell RNA sequencing (scRNA-seq) of endometrial samples from patients with sPE (<i>n</i> = 11) and controls (<i>n</i> = 12) revealed sPE-associated shifts in cell composition, manifesting as a stromal mosaic state characterized by proliferative stromal cells (<i>MMP11</i> and <i>SFRP4</i>) alongside <i>IGFBP1</i><sup>+</sup> decidualized cells, with concurrent epithelial mosaicism and a dearth of epithelial–stromal transition associated with decidualization. Cell–cell communication network mapping underscored aberrant crosstalk among specific cell types, implicating crucial pathways such as endoglin, WNT and SPP1. Spatial transcriptomics in a replication cohort validated DR-associated features. Laser capture microdissection/mass spectrometry in a second replication cohort corroborated several scRNA-seq findings, notably the absence of stromal to epithelial transition at a pathway level, indicating a disrupted response to steroid hormones, particularly estrogens. These insights shed light on potential molecular mechanisms underpinning DR pathogenesis in the context of sPE.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"99 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142935017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/s41591-024-03408-6
Nora Eisemann, Stefan Bunk, Trasias Mukama, Hannah Baltus, Susanne A. Elsner, Timo Gomille, Gerold Hecht, Sylvia Heywang-Köbrunner, Regine Rathmann, Katja Siegmann-Luz, Thilo Töllner, Toni Werner Vomweg, Christian Leibig, Alexander Katalinic
Artificial intelligence (AI) in mammography screening has shown promise in retrospective evaluations, but few prospective studies exist. PRAIM is an observational, multicenter, real-world, noninferiority, implementation study comparing the performance of AI-supported double reading to standard double reading (without AI) among women (50–69 years old) undergoing organized mammography screening at 12 sites in Germany. Radiologists in this study voluntarily chose whether to use the AI system. From July 2021 to February 2023, a total of 463,094 women were screened (260,739 with AI support) by 119 radiologists. Radiologists in the AI-supported screening group achieved a breast cancer detection rate of 6.7 per 1,000, which was 17.6% (95% confidence interval: +5.7%, +30.8%) higher than and statistically superior to the rate (5.7 per 1,000) achieved in the control group. The recall rate in the AI group was 37.4 per 1,000, which was lower than and noninferior to that (38.3 per 1,000) in the control group (percentage difference: −2.5% (−6.5%, +1.7%)). The positive predictive value (PPV) of recall was 17.9% in the AI group compared to 14.9% in the control group. The PPV of biopsy was 64.5% in the AI group versus 59.2% in the control group. Compared to standard double reading, AI-supported double reading was associated with a higher breast cancer detection rate without negatively affecting the recall rate, strongly indicating that AI can improve mammography screening metrics.
{"title":"Nationwide real-world implementation of AI for cancer detection in population-based mammography screening","authors":"Nora Eisemann, Stefan Bunk, Trasias Mukama, Hannah Baltus, Susanne A. Elsner, Timo Gomille, Gerold Hecht, Sylvia Heywang-Köbrunner, Regine Rathmann, Katja Siegmann-Luz, Thilo Töllner, Toni Werner Vomweg, Christian Leibig, Alexander Katalinic","doi":"10.1038/s41591-024-03408-6","DOIUrl":"https://doi.org/10.1038/s41591-024-03408-6","url":null,"abstract":"<p>Artificial intelligence (AI) in mammography screening has shown promise in retrospective evaluations, but few prospective studies exist. PRAIM is an observational, multicenter, real-world, noninferiority, implementation study comparing the performance of AI-supported double reading to standard double reading (without AI) among women (50–69 years old) undergoing organized mammography screening at 12 sites in Germany. Radiologists in this study voluntarily chose whether to use the AI system. From July 2021 to February 2023, a total of 463,094 women were screened (260,739 with AI support) by 119 radiologists. Radiologists in the AI-supported screening group achieved a breast cancer detection rate of 6.7 per 1,000, which was 17.6% (95% confidence interval: +5.7%, +30.8%) higher than and statistically superior to the rate (5.7 per 1,000) achieved in the control group. The recall rate in the AI group was 37.4 per 1,000, which was lower than and noninferior to that (38.3 per 1,000) in the control group (percentage difference: −2.5% (−6.5%, +1.7%)). The positive predictive value (PPV) of recall was 17.9% in the AI group compared to 14.9% in the control group. The PPV of biopsy was 64.5% in the AI group versus 59.2% in the control group. Compared to standard double reading, AI-supported double reading was associated with a higher breast cancer detection rate without negatively affecting the recall rate, strongly indicating that AI can improve mammography screening metrics.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"133 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142934702","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/d41591-024-00083-5
Christine Laine, Dianne Babski, Vivienne C. Bachelet, Till W Bärnighausen, Christopher Baethge, Kirsten Bibbins-Domingo, Frank Frizelle, Laragh Gollogy, Sabine Kleinert, Elizabeth Loder, João Monteiro, Eric J Rubin, Peush Sahni, Christina C Wee, Jin-Hong Yoo, Lilia Zakhama
Discover the world’s best science and medicine | Nature.com
发现世界上最好的科学和医学|nature.com
{"title":"Predatory journals: what can we do to protect their prey?","authors":"Christine Laine, Dianne Babski, Vivienne C. Bachelet, Till W Bärnighausen, Christopher Baethge, Kirsten Bibbins-Domingo, Frank Frizelle, Laragh Gollogy, Sabine Kleinert, Elizabeth Loder, João Monteiro, Eric J Rubin, Peush Sahni, Christina C Wee, Jin-Hong Yoo, Lilia Zakhama","doi":"10.1038/d41591-024-00083-5","DOIUrl":"https://doi.org/10.1038/d41591-024-00083-5","url":null,"abstract":"Discover the world’s best science and medicine | Nature.com","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"28 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142935018","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1038/s41591-024-03451-3
Nicholas A. Vitanza, Rebecca Ronsley, Michelle Choe, Kristy Seidel, Wenjun Huang, Stephanie D. Rawlings-Rhea, Madison Beam, Leonel Steinmetzer, Ashley L. Wilson, Christopher Brown, Adam Beebe, Catherine Lindgren, Joshua A. Gustafson, Amy Wein, Susan Holtzclaw, Corrine Hoeppner, Hannah E. Goldstein, Samuel R. Browd, Jason S. Hauptman, Amy Lee, Jeffrey G. Ojemann, Erin E. Crotty, Sarah E. S. Leary, Francisco A. Perez, Jason N. Wright, Marta M. Alonso, Matthew D. Dun, Jessica B. Foster, Diana Hurst, Ada Kong, Alison Thomsen, Rimas J. Orentas, Catherine M. Albert, Navin Pinto, Colleen Annesley, Rebecca A. Gardner, On Ho, Sowmya Pattabhi, Juliane Gust, Jason P. Wendler, Julie R. Park, Michael C. Jensen
Diffuse intrinsic pontine glioma (DIPG) is a fatal central nervous system (CNS) tumor that confers a median survival of 11 months. As B7-H3 is expressed on pediatric CNS tumors, we conducted BrainChild-03, a single-center, dose-escalation phase 1 clinical trial of repetitive intracerebroventricular (ICV) dosing of B7-H3-targeting chimeric antigen receptor T cells (B7-H3 CAR T cells) for children with recurrent or refractory CNS tumors and DIPG. Here we report results from Arm C, restricted to patients with DIPG. The primary objectives were to assess feasibility and tolerability, which were both met. Secondary objectives included assessments of CAR T cell distribution and survival. A total of 23 patients with DIPG enrolled, and 21 were treated with repeated doses of ICV B7-H3 CAR T cells using intra-patient dose-escalation regimens without previous lymphodepletion. Concurrent tumor-directed therapy, including re-irradiation, was not allowed while on protocol therapy. We delivered a total of 253 ICV doses and established the highest planned dose regimen, DR4, which escalated up to 10 × 107 cells per dose, as the maximally tolerated dose regimen. Common adverse events included headache, fatigue and fever. There was one dose-limiting toxicity (intratumoral hemorrhage) during DR2. For all treated patients (n = 21), the median survival from their initial CAR T cell infusion was 10.7 months and the median survival from diagnosis was 19.8 months with 3 patients still alive at 44, 45 and 52 months from diagnosis. Ultimately, this completed first-in-human trial shows that repetitive ICV dosing of B7-H3 CAR T cells in pediatric and young adult patients with DIPG is tolerable, including multiyear repeated dosing, and may have clinical efficacy that warrants further investigation on a multisite phase 2 trial. ClinicalTrials.gov registration: NCT04185038.
弥漫性固有脑桥胶质瘤(DIPG)是一种致命的中枢神经系统(CNS)肿瘤,平均生存期为11个月。由于B7-H3在儿童中枢神经系统肿瘤中表达,我们开展了BrainChild-03,这是一项单中心、剂量递增的1期临床试验,用于反复给药B7-H3靶向嵌合抗原受体T细胞(B7-H3 CAR - T细胞)治疗复发或难治性中枢神经系统肿瘤和DIPG的儿童。在这里,我们报告C组的结果,仅限于DIPG患者。主要目的是评估可行性和耐受性,两者都达到了。次要目标包括评估CAR - T细胞分布和存活。共有23名DIPG患者入组,其中21名患者使用患者内剂量递增方案接受重复剂量的ICV B7-H3 CAR - T细胞治疗,之前没有淋巴细胞清除。在方案治疗期间,不允许同时进行肿瘤定向治疗,包括再照射。我们总共提供了253个ICV剂量,并建立了最高计划剂量方案,DR4,每剂量增加到10 × 107个细胞,作为最大耐受剂量方案。常见的不良反应包括头痛、疲劳和发烧。在DR2期间有一个剂量限制性毒性(肿瘤内出血)。对于所有接受治疗的患者(n = 21),初始CAR - T细胞输注后的中位生存期为10.7个月,诊断后的中位生存期为19.8个月,其中3例患者在诊断后44、45和52个月仍存活。最终,这项完成的首次人体试验表明,B7-H3 CAR - T细胞在患有DIPG的儿科和年轻成人患者中的重复ICV剂量是可耐受的,包括多年重复给药,并且可能具有临床疗效,值得在多地点的2期试验中进一步研究。ClinicalTrials.gov注册:NCT04185038。
{"title":"Intracerebroventricular B7-H3-targeting CAR T cells for diffuse intrinsic pontine glioma: a phase 1 trial","authors":"Nicholas A. Vitanza, Rebecca Ronsley, Michelle Choe, Kristy Seidel, Wenjun Huang, Stephanie D. Rawlings-Rhea, Madison Beam, Leonel Steinmetzer, Ashley L. Wilson, Christopher Brown, Adam Beebe, Catherine Lindgren, Joshua A. Gustafson, Amy Wein, Susan Holtzclaw, Corrine Hoeppner, Hannah E. Goldstein, Samuel R. Browd, Jason S. Hauptman, Amy Lee, Jeffrey G. Ojemann, Erin E. Crotty, Sarah E. S. Leary, Francisco A. Perez, Jason N. Wright, Marta M. Alonso, Matthew D. Dun, Jessica B. Foster, Diana Hurst, Ada Kong, Alison Thomsen, Rimas J. Orentas, Catherine M. Albert, Navin Pinto, Colleen Annesley, Rebecca A. Gardner, On Ho, Sowmya Pattabhi, Juliane Gust, Jason P. Wendler, Julie R. Park, Michael C. Jensen","doi":"10.1038/s41591-024-03451-3","DOIUrl":"https://doi.org/10.1038/s41591-024-03451-3","url":null,"abstract":"<p>Diffuse intrinsic pontine glioma (DIPG) is a fatal central nervous system (CNS) tumor that confers a median survival of 11 months. As B7-H3 is expressed on pediatric CNS tumors, we conducted BrainChild-03, a single-center, dose-escalation phase 1 clinical trial of repetitive intracerebroventricular (ICV) dosing of B7-H3-targeting chimeric antigen receptor T cells (B7-H3 CAR T cells) for children with recurrent or refractory CNS tumors and DIPG. Here we report results from Arm C, restricted to patients with DIPG. The primary objectives were to assess feasibility and tolerability, which were both met. Secondary objectives included assessments of CAR T cell distribution and survival. A total of 23 patients with DIPG enrolled, and 21 were treated with repeated doses of ICV B7-H3 CAR T cells using intra-patient dose-escalation regimens without previous lymphodepletion. Concurrent tumor-directed therapy, including re-irradiation, was not allowed while on protocol therapy. We delivered a total of 253 ICV doses and established the highest planned dose regimen, DR4, which escalated up to 10 × 10<sup>7</sup> cells per dose, as the maximally tolerated dose regimen. Common adverse events included headache, fatigue and fever. There was one dose-limiting toxicity (intratumoral hemorrhage) during DR2. For all treated patients (<i>n</i> = 21), the median survival from their initial CAR T cell infusion was 10.7 months and the median survival from diagnosis was 19.8 months with 3 patients still alive at 44, 45 and 52 months from diagnosis. Ultimately, this completed first-in-human trial shows that repetitive ICV dosing of B7-H3 CAR T cells in pediatric and young adult patients with DIPG is tolerable, including multiyear repeated dosing, and may have clinical efficacy that warrants further investigation on a multisite phase 2 trial. ClinicalTrials.gov registration: NCT04185038.</p>","PeriodicalId":19037,"journal":{"name":"Nature Medicine","volume":"78 1","pages":""},"PeriodicalIF":82.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142934989","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}