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New Generalization of Cohesion Factor Model for Polar Compounds: Peng-Robinson Equation of State 极性化合物内聚因子模型的新推广:Peng-Robinson状态方程
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.196847.1657
M. Joshipura, N. Shah, Sudir Dabke
Predicting physical properties is one of the major requirements in process engineering. Equations of state (EoS) are widely used for predicting physical properties. Among many EoS, cubic equations of state (cubic EoS) are being used because they are simple and applicable over a wide range of temperature and pressure. However, these cubic EoS fail to predict properties of a compound having polarity, association as well as hydrogen bonding. In the present study a new generalization for cohesion factor, to be used with Peng-Robinson (PR) EoS was proposed. In developing the model, compound-specific parameters for nearly 300 compounds were generated. These compound-specific parameters were correlated in terms of the reduced dipole moment and critical compressibility factor. Proposed models were compared with models available in the literature. Vapor pressure, heat of vaporization, saturated liquid density and second virial coefficient of the compounds were predicted. It was observed that the models with reduced dipole predicted various properties accurately for highly polar compounds without losing accuracy in predicting properties for non-polar compounds.
预测物理性质是过程工程的主要要求之一。状态方程(EoS)被广泛用于预测物理性质。在许多状态方程中,立方状态方程(cubic equation of state,简称cubic EoS)因其简单且适用于广泛的温度和压力范围而被广泛使用。然而,这些立方方程不能预测具有极性、缔合和氢键的化合物的性质。本文提出了一种适用于Peng-Robinson (PR)方程的内聚因子的新概化方法。在开发模型的过程中,生成了近300种化合物的特定参数。这些化合物的特定参数与约简偶极矩和临界压缩系数相关。将提出的模型与文献中现有的模型进行比较。对化合物的蒸汽压、汽化热、饱和液体密度和第二维里系数进行了预测。结果表明,偶极子化简后的模型能准确预测高极性化合物的各种性质,而对非极性化合物的预测精度不降低。
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引用次数: 1
Estimation of Viscosities and Their Deviations in Organic Liquid Mixtures at 303.15 K-A Comparative Study 303.15K下有机液体混合物粘度及其偏差的估算——一项比较研究
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.214856.1718
Timmeswara Sarma Nori, C. Srinivasu, Sk Baba Vali, P. S. Sastry
Viscosities and densities are measured experimentally for three binary liquid mixtures of Aniline + Toluene, Aniline + o-Xylene and Aniline + Mesitylene using Ostwald’s viscometer and Specific gravity bottle at T = 303.15 K. Viscosities have also been calculated using empirical relations viz., Bingham relation, Kendall-Munroe relation, Arrhenius -Eyring relation, Croenaurer-Rothfus-Kermore relation and Gambrill relation. The validity of these correlations has been verified by respective deviations between calculated values and experimental values. These results show that positive deviations are present in all the three binary mixtures at T = 303.15 K. The results of all the relations are comparatively in good agreement with experimental results. These are used to draw the characteristics of the molecular association among the components of respective binary liquid mixtures.
使用Ostwald粘度计和比重瓶在T=303.15K下对苯胺+甲苯、苯胺+邻二甲苯和苯胺+均三甲苯的三种二元液体混合物的粘度和密度进行了实验测量。还使用经验关系式计算了粘度,即Bingham关系式、Kendall-Munroe关系式、Arrhenius-Eyring关系式,克罗关系和甘比尔关系。通过计算值和实验值之间的偏差,验证了这些相关性的有效性。这些结果表明,在T=303.15K时,三种二元混合物都存在正偏差。所有关系式的结果与实验结果比较一致。这些用于绘制各个二元液体混合物的组分之间的分子缔合的特征。
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引用次数: 0
QSAR Study of Arylpyridone Oxime Based on the SVM and Elman Algorithms 基于SVM和Elman算法的芳基吡啶酮肟QSAR研究
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.205099.1686
Wan Zhong-Yu
Based on topological chemistry theory, a quantum chemistry method is used to calculate the 91 electrical distance vector (Mi) of a molecule, which is used to characterize the chemical microenvironment in which the molecule is located. The multivariate stepwise regression method was used to screen the variables to obtain the ternary best equation. Correlation coefficient R2=0.887, R2CV=0.673, passed by FIT and AIC .The ternary variable is used as the input set, and the inhibition rate is used as the output set. The LS-SVM and Elman-ANN algorithms are used for prediction and comparison. The results show that R2 is 0.993 and 0.994 respectively. The prediction ability is similar. But the stability of Elman is better, and the two-dimensional structure affecting the molecule is structural fragments such as =CH-, -CH<.
基于拓扑化学理论,使用量子化学方法计算分子的91电距离矢量(Mi),用于表征分子所处的化学微环境。采用多元逐步回归方法筛选变量,得到三元最优方程。相关系数R2=0.87R2CV=0.673,通过FIT和AIC。三元变量用作输入集,抑制率用作输出集。使用LS-SVM和Elman ANN算法进行预测和比较。结果表明,R2分别为0.993和0.994。预测能力相似。但Elman的稳定性较好,影响分子的二维结构是结构片段,如=CH-,-CH<。
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引用次数: 1
Response Surface Methodology (RSM) for Statistical Optimization of Cd2+ Removal Using Modified Zn2Al-layer Double Hydroxide by Quinoline Yellow 响应面法(RSM)用于喹啉黄改性zn2al层双氢氧化物去除Cd2+的统计优化
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.212523.1709
M. Janighorban, N. Sohrabi, N. Rasouli, M. Ghaedi
Modified Zn2Al-layered double hydroxide (LDH) intercalated with Quinoline Yellow (Q) (Zn2Al-LDH/Q) was prepared by a facile and simple method and then used to remove of Cd2+ ions from water. The chemical composition and morphology of Zn2Al-LDH/Q was investigated by X-ray diffraction (XRD), Brunauer-Emmett-Teller (BET), Field emission Scanning electron microscopy (FE-SEM) and Energy-dispersive X-ray spectroscopy. Response surface methodology was employed to optimize the adsorption parameters of Cd2+ Such optimization was undertaken to ensure a high efficiency over the experimental ranges employed and to evaluate the interactive effects of the initial concentration of Cd2+, pH, adsorbent dosage, temperature and contact time in order to improve the conditions employed in the batch process. The analysis of variance (ANOVA) indicated that a second-order polynomial regression equation was the most appropriate polynomial for fitting the experimental data. The experimental confirmation tests showed a correlation between the predicted and experimental responses (R2). The optimum adsorption parameters were predicted as an initial Cd2+ concentration of 35 mg l-1, a pH value of 4.17, the adsorbent dosage of 0.03 g/L, a temperature of 32.5 °C and contact time of 51 min. Under optimum conditions, the highest adsorption efficiency and maximum adsorption capacity were 45% and 12.18 mg/g, respectively.
采用简单易行的方法制备了改性的Zn2Al层状双氢氧化物(LDH)与喹啉黄(Q)(Zn2Al LDH/Q),并将其用于去除水中的Cd2+离子。采用X射线衍射(XRD)、Brunauer-Emmett-Teller(BET)、场发射扫描电子显微镜(FE-SEM)和能谱仪对Zn2Al LDH/Q的化学组成和形貌进行了研究。采用响应面法优化Cd2+的吸附参数。进行这种优化是为了确保在所用的实验范围内具有高效率,并评估Cd2+的初始浓度、pH、吸附剂剂量、温度和接触时间的相互作用,以改善间歇过程中所用的条件。方差分析(ANOVA)表明,二阶多项式回归方程是拟合实验数据最合适的多项式。实验确认测试显示预测响应和实验响应之间存在相关性(R2)。最佳吸附参数为初始Cd2+浓度为35mg l-1,pH值为4.17,吸附剂用量为0.03g/l,温度为32.5°C,接触时间为51min。在最佳条件下,最高吸附效率和最大吸附容量分别为45%和12.18mg/g。
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引用次数: 0
Estimation of Solubility of BTEX, Light Hydrocarbons and Sour Gases in Triethylene Glycol Using the SAFT Equation of State 用SAFT状态方程估计BTEX、轻烃和酸性气体在三甘醇中的溶解度
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.208933.1699
Najmeh Tazang, Farzad Alavi, J. Javanmardi
An accurate prediction of the absorption and desorption of Benzene, Toluene, Ethylbenzene, and Xylenes (BTEX) is important for the estimation of BTEX emissions from glycol units in natural gas processing plants. This work presents an approach to accurately model the solubilities of BTEX in triethylene glycol (TEG). The absorption of gases studied in this work into TEG is physical in nature, and therefore is treated as physisorption in modeling. The Huang-Radosz version of Statistical Associating Fluid Theory (SAFT-HR) Equation of State (EoS) was utilized to estimate the solubilities of BTEX in TEG. A new set of SAFT parameters for TEG, as well as a new set of binary interaction parameters between TEG and other components were obtained by fitting experimental vapor pressure and liquid density of TEG and available experimental binary VLE data, respectively. Using these parameters, solubility of multicomponent gases in TEG are accurately predicted. To have an estimate of the relative accuracy of SAFT-HR EoS, the results from Perturbed–Chain SAFT (PC–SAFT) and Peng–Robinson (PR) EoS are also reported. The overall average of root–mean–square deviation (RMSD) for binary and ternary systems studied in this work, using SAFT-HR, PC–SAFT, and PR EoS obtained equal to 0.12, 0.20, and 1.56, respectively.
准确预测苯、甲苯、乙苯和二甲苯(BTEX)的吸收和解吸对于估计天然气处理厂乙二醇装置的BTEX排放量非常重要。本文提出了一种精确模拟BTEX在三甘醇(TEG)中溶解度的方法。这项工作中研究的气体在TEG中的吸收本质上是物理的,因此在建模中被视为物理吸收。利用Huang Radosz版本的统计缔合流体理论(SAFT-HR)状态方程(EoS)来估计BTEX在TEG中的溶解度。通过拟合TEG的实验蒸汽压和液体密度以及可用的实验二元VLE数据,分别获得了TEG的一组新的SAFT参数,以及TEG与其他组分之间的一组二元相互作用参数。利用这些参数,可以准确地预测多组分气体在TEG中的溶解度。为了估计SAFT-HR-EoS的相对精度,还报道了扰动链SAFT(PC–SAFT)和Peng–Robinson(PR)EoS的结果。本工作中使用SAFT-HR、PC–SAFT和PR EoS研究的二元和三元系统的均方根偏差(RMSD)的总平均值分别等于0.12、0.20和1.56。
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引用次数: 1
Silver Nanoparticle Trypsin Corona Formation and the Impacts on Enzymatic Potency 纳米银颗粒胰蛋白酶电晕形成及其对酶效的影响
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.213260.1713
Khorshid Darvishi-Ganji, Fateme Mirzajani, A. Aliahmadi, Alireza Fakhari-Zavareh, A. Ghassempour
Herein, the protein corona formation on the spherical metal nanoparticles was studied to investigate the possible effects of silver nanoparticles (AgNPs) on the protein activity and conformation. The digestion capability of trypsin was monitored on the human serum albumin (HSA) at standard enzymatic hydrolysis conditions in the absence and presence of different concentrations of AgNPs. So the ratio of enzyme:HSA, the duration and the temperature of nanoparticle treatment were evaluated. The activity of treated trypsin molecules, in the form of hard (HC) and soft corona (SC) were studied using sodium dodecyl sulfate poly acrylamide gel electrophoresis (SDS-PAGE), and nano liquid chromatography electrospray (ion trap) mass spectrometry (nano LC-ESI/MS, LC-ESI/MS). In addition the characteristics of silver nanoparticles and the formation of HSA corona on the nanoparticle surface were monitored using ultra-violet/visible spectroscopy (UV-Vis), Dynamic light scattering (DLS) and fluorescence spectrophotometry. The results demonstrated that not only the corona formation but also the AgNPs/Trypsin interaction, decreases the hydrolysis potency of trypsin. Furthermore, the encountering of the AgNPs/HSA could influence both nanoparticles and HSA molecule features. Accompanied with fluorescence study, that the HSA secondary structure. Also LC-ESI/MS data revealed the most affected HSA triptics have α-helix structure.
本文研究了球形金属纳米粒子上蛋白质电晕的形成,探讨了银纳米粒子(AgNPs)对蛋白质活性和构象的可能影响。在标准酶解条件下,在没有和存在不同浓度AgNPs的情况下,监测胰蛋白酶对人血清白蛋白(HSA)的消化能力。对酶与HSA的比值、纳米颗粒处理时间和温度进行了评价。采用十二烷基硫酸钠聚丙烯酰胺凝胶电泳(SDS-PAGE)和纳米液相色谱电喷雾(离子阱)质谱(nano LC-ESI/MS、LC-ESI/MS)研究处理后胰蛋白酶分子以硬冠(HC)和软冠(SC)形式存在的活性。此外,利用紫外/可见光谱(UV-Vis)、动态光散射(DLS)和荧光分光光度法监测了银纳米颗粒的特性和纳米颗粒表面HSA电晕的形成。结果表明,除了电晕的形成外,AgNPs/胰蛋白酶的相互作用也降低了胰蛋白酶的水解能力。此外,AgNPs/HSA的相遇会影响纳米颗粒和HSA的分子特征。结合荧光研究,表明HSA二级结构。LC-ESI/MS数据显示,受影响最大的HSA颗粒具有α-螺旋结构。
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引用次数: 1
Inhibition of Cyclooxygenase-2 and Thymidylate Synthase by Dietary Sphingomyelins: Insights from DFT and Molecular Docking Studies 膳食鞘氨醇对环氧合酶-2和胸苷酸合成酶的抑制作用:DFT和分子对接研究的启示
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-06-01 DOI: 10.22036/PCR.2020.214026.1717
M. Abdul-Hammed, B. Semire, Ebhohimen Ehizuelen Israel, A. Oyebamiji, T. Olowolafe
Inhibition of cyclooxygenase-2 (COX-2) and thymidylate Synthase (TS) enzymes play prominent chemopreventive and chemotherapeutic roles in colorectal cancer studies. Basic computational investigation on the inhibition of these enzymes by sphingomyelin (SM) derivatives was carried out in silico using Density Functional Theory (DFT) and molecular docking studies. Interactions between SM with unsaturated fatty acids, COX-2 and TS were compared with that of 5-Fluorouracil (5-FU) and Celecoxib, the standard anti-colorectal cancer drugs. The results showed that SM with alpha-linoleic acid derivative possesses the highest HOMO (-4.70 eV) and lowest LUMO (0.09 eV) energies, which may enhance their interactions with their target receptors. All SM molecules, irrespective of the fatty acid nature have lower binding affinities, (ΔG = -5.5 to - 6.8 kcal/mol) against COX-2 than Celecoxib (-10.1 kcal/mol), indicating that the standard COX-2 inhibitor is much stronger than the natural SM. However, some of the natural SM are stronger inhibitors of thymidylate synthase than the standard drug, 5-FU, with SM having alpha-linoleic acid derivative (ΔG = - 6.2 kcal/mol) higher than 5-FU (ΔG = -5.28 kcal/mol), but lower than that of the active drug metabolite, 5-FdUMP (ΔG = - 7.4 kcal/mol). These ligand-protein interactions were all feasible and spontaneous.
环氧化酶-2(COX-2)和胸苷酸合成酶(TS)的抑制在结直肠癌癌症研究中发挥着显著的化学预防和化学治疗作用。利用密度泛函理论(DFT)和分子对接研究,在计算机上对鞘磷脂(SM)衍生物对这些酶的抑制作用进行了基础计算研究。将SM与不饱和脂肪酸、COX-2和TS的相互作用与抗癌症标准药物5-氟尿嘧啶(5-FU)和塞来昔布的相互作用进行比较。结果表明,具有α-亚油酸衍生物的SM具有最高的HOMO(-4.70eV)和最低的LUMO(0.09eV)能量,这可能增强它们与靶受体的相互作用。所有SM分子,无论脂肪酸性质如何,对COX-2的结合亲和力(ΔG=-5.5至-6.8 kcal/mol)均低于塞来昔布(-10.1 kcal/mol,SM的α-亚油酸衍生物(ΔG=-6.2 kcal/mol)高于5-FU(ΔG=5.28 kcal/mol。这些配体-蛋白质相互作用都是可行的并且是自发的。
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引用次数: 1
Biosynthesis of Silver Nanoparticles Using Leaves of Acacia Melanoxylon and their Application as Dopamine and Hydrogen Peroxide Sensors 黑刺槐叶合成纳米银及其在多巴胺和过氧化氢传感器中的应用
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-03-01 DOI: 10.22036/PCR.2019.205211.1688
Shashanka Rajendrachari, K. Be
In this work, we described a cost-effective and environmentally friendly technique for green synthesis of colloidal silver nanoparticles from aqueous extract of fresh leaves of Acacia melanoxylon and its application as a dopamine and hydrogen peroxide sensor. The prepared silver nanoparticles were characterized by UV-Visible absorption spectroscopy, X-ray diffraction (XRD), scanning electron microscopy (SEM), zeta-potential analysis, thermogravimetric analysis (TGA), differential scanning calorimeter (DSC), etc. This method was found to be cost-effective, eco-friendly when compared to that of chemical and physical methods of nanoparticle synthesis. Silver nanoparticles modified carbon paste electrode (CPE) was fabricated for the detection of dopamine and hydrogen peroxide. The fabricated electrode showed an excellent sensitivity towards the oxidation of both dopamine (DA) and hydrogen peroxide (H2O2) in 0.1M phosphate buffer (PBS) solution at a pH 7. The effect of the scan rate, the concentration of the modifier and the analyte were studied by the cyclic voltammetric technique. The result exhibits good electrocatalytic activity, diffusion-controlled process and linear increase in peak current with different concentrations of dopamine and hydrogen peroxide.
在这项工作中,我们描述了一种经济、环保的绿色合成胶体银纳米粒子的技术,该技术是由黑刺槐鲜叶的水提取物及其作为多巴胺和过氧化氢传感器的应用。采用紫外-可见吸收光谱、x射线衍射(XRD)、扫描电镜(SEM)、ζ电位分析(zeta-potential analysis)、热重分析(TGA)、差示扫描量热仪(DSC)等对制备的纳米银进行了表征。与化学和物理合成纳米粒子的方法相比,该方法具有成本效益和生态友好性。制备了纳米银修饰碳糊电极(CPE),用于多巴胺和过氧化氢的检测。在pH为7的0.1M磷酸缓冲液(PBS)溶液中,所制备的电极对多巴胺(DA)和过氧化氢(H2O2)的氧化均表现出良好的敏感性。采用循环伏安法研究了扫描速率、改性剂浓度和被分析物浓度的影响。结果表明,不同浓度的多巴胺和过氧化氢均具有良好的电催化活性和扩散控制过程,峰电流呈线性增加。
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引用次数: 53
Effect of Medium on the Kinetics of Stereoselective Synthesis of a Highly Functionalized Cyclopropanesame 介质对高功能化环丙烷立体选择性合成动力学的影响
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-03-01 DOI: 10.22036/PCR.2019.176786.1607
F. Mahmoudi, M. Shahraki, Sayeydmosatfa Habibi-khorassani
The effect of different media on the kinetics and mechanism of formation of diethyl (1S, 2S)-3, 3-dibenzoylcyclopropane-1, 2-dicarboxylate was investigated. The reaction was accelerated with changing the medium from non-ionic to ionic. Among the selected ionic salts, NaCl was the best salt to increase the reaction rate of the titled synthesis about 2.5-fold (kobs = 1.295 M-1.min-1 against kobs = 3.105 M-1.min-1). The incremental effect of ionic salts was found to be in this order: NaCl > NaBr > KBr > KCl. Isokinetic plots for the reaction in the presence of different salts were obtained and a linear relationship which indicated an identical mechanism for all reactions, was found. Moreover, the effect of cationic, nonionic, and anionic surfactants on the reaction rate was evaluated. Substantial reduction on the reaction rate and change in the mechanism was observed with the addition of an anionic surfactant such as sodium dodecyl sulfate. The values of activation parameters were also estimated (ΔH‡ = 80.1 ± 0.6 kJ.mol-1, ΔS‡ = 23.9 ± 2.0 J.mol-1.K-1, and ΔG‡ = 72.9 ± 1.1 kJ.mol-1) and the positive value of ΔH‡ confirmed the endothermic process and entropy value referred to an associative mechanism.
研究了不同介质对(1S, 2S)- 3,3 -二苯甲酰环丙烷- 1,2 -二羧酸二乙酯生成动力学和机理的影响。将介质由非离子型变为离子型,加速了反应。在所选择的离子盐中,NaCl的效果最好,可使反应速率提高2.5倍(kobs = 1.295 M-1)。min-1对kobs = 3.105 m -1 min-1)。离子盐的增量效应依次为:NaCl > NaBr > KBr > KCl。得到了不同盐存在下反应的等速图,发现了表明所有反应具有相同机理的线性关系。考察了阳离子、非离子和阴离子表面活性剂对反应速率的影响。在阴离子表面活性剂如十二烷基硫酸钠的加入下,反应速率明显降低,反应机理发生了变化。对激活参数值也进行了估计(ΔH‡= 80.1±0.6 kJ)。mol-1, ΔS‡= 23.9±2.0 J.mol-1。K-1, ΔG‡= 72.9±1.1 kJ.mol-1), ΔH‡的正值证实了吸热过程和熵值的关联机制。
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引用次数: 0
Theoretical Investigation of the Complexation Reaction of Procaine-hydrochloride by β-cyclodextrin β-环糊精与盐酸普鲁卡因络合反应的理论研究
IF 1.2 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2020-03-01 DOI: 10.22036/PCR.2020.205547.1691
M. Azayez, T. Fergoug, N. Meddah-Araibi, C. Zelmat, Y. Bouhadda
Abstract. . Quantum-chemical calculations were performed to study the complexation of drug molecule procaine hydrochloride with beta cyclodextrin (β-CD) in the gas phase and in water. The inclusion process was optimized by the semi empirical method PM3 and the obtained complex structure was further refined by ONIOM method (DFT: PM3). It is found that (B3LYP/6-31G(d,p) : PM3) provides the best energy minimum for the complex, compared to M06-2X and WB97XD functional. Given the energy profile, the configuration of the complex formed indicates that the benzene ring is completely included in the hydrophobic cavity of the β-CD. The thermodynamic parameters analysis has shown that the procaine/β-CD complexation is enthalpically favorable, and the complex is well structured. Natural bond orbital (NBO) analysis indicates that no hydrogen bond interaction exists, and the procaine/β-CD complex is mainly stabilized by Van der Waals forces. 1D 1H NMR spectra analysis shows that the procaine molecule penetrates into the cavity of this CD with the aromatic ring.
摘要采用量子化学方法研究了药物分子盐酸普鲁卡因与β-环糊精(β-CD)在气相和水中的络合作用。采用半经验方法PM3对包合工艺进行了优化,并用niom方法(DFT: PM3)对得到的复合结构进行了进一步细化。与M06-2X和WB97XD相比,(B3LYP/6-31G(d,p): PM3)为配合物提供了最佳的能量最小值。根据能量谱,所形成的络合物的构型表明苯环完全包含在β-CD的疏水腔中。热力学参数分析表明,普鲁卡因/β-CD配合物具有良好的热稳定性,配合物结构良好。自然键轨道(NBO)分析表明,产物不存在氢键相互作用,普鲁卡因/β-CD配合物主要靠范德华力稳定。1D 1H核磁共振谱分析表明,普鲁卡因分子通过芳香环进入CD的腔内。
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引用次数: 3
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