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Validating a Four-gene Set for H-ARS Severity Prediction in Peripheral Blood Samples of Irradiated Rhesus Macaques. 验证用于预测辐照猕猴外周血样本中 H-ARS 严重程度的四基因集
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-05-01 DOI: 10.1667/RADE-23-00162.1
D Schwanke, S Schüle, S Stewart, O O Fatanmi, S Y Wise, C Hackenbroch, T Wiegel, V K Singh, M Port, M Abend, P Ostheim

Increased radiological and nuclear threats require preparedness. Our earlier work identified a set of four genes (DDB2, FDXR, POU2AF1 and WNT3), which predicts severity of the hematological acute radiation syndrome (H-ARS) within the first three days postirradiation In this study of 41 Rhesus macaques (Macaca mulatta, 27 males, 14 females) irradiated with 5.8-7.2 Gy (LD29-50/60), including some treated with gamma-tocotrienol (GT3, a radiation countermeasure) we independently validated these genes as predictors in both sexes and examined them after three days. At the Armed Forces Radiobiology Research Institute/Uniformed Services University of the Health Sciences, peripheral whole blood (1 ml) of Rhesus macaques was collected into PAXgene® Blood RNA tubes pre-irradiation after 1, 2, 3, 35 and 60 days postirradiation, stored at -80°C for internal experimental analyses. Leftover tubes from these already ongoing studies were kindly provided to Bundeswehr Institute of Radiobiology. RNA was isolated (QIAsymphony), converted into cDNA, and for further gene expression (GE) studies quantitative RT-PCR was performed. Differential gene expression (DGE) was measured relative to the pre-irradiation Rhesus macaques samples. Within the first three days postirradiation, we found similar results to human data: 1. FDXR and DDB2 were up-regulated, FDXR up to 3.5-fold, and DDB2 up to 13.5-fold in the median; 2. POU2AF1 appeared down regulated around tenfold in nearly all Rhesus macaques; 3. Contrary to human data, DDB2 was more up-regulated than FDXR, and the difference of the fold change (FC) ranged between 2.4 and 10, while the median fold changes of WNT3, except days 1 and 35, were close to 1. Nevertheless, 46% of the Rhesus macaques showed down-regulated WNT3 on day one postirradiation, which decreased to 12.2% on day 3 postirradiation. Considering the extended phase, there was a trend towards decreased fold changes at day 35, with median-fold changes ranging from 0.7 for DDB2 to 0.1 for POU2AF1, and on day 60 postirradiation, DGE in surviving animals was close to pre-exposure values for all four genes. In conclusion, the diagnostic significance for radiation-induced H-ARS severity prediction of FDXR, DDB2, and POU2AF1 was confirmed in this Rhesus macaques model. However, DDB2 showed higher GE values than FDXR. As shown in previous studies, the diagnostic significance of WNT3 could not be reproduced in Rhesus macaques; this could be due to the choice of animal model and methodological challenges.

辐射和核威胁的增加要求我们做好准备。我们早先的工作发现了一组四个基因(DDB2、FDXR、POU2AF1 和 WNT3),可预测辐照后三天内血液急性辐射综合征(H-ARS)的严重程度。在这项研究中,我们对 41 只猕猴(猕猴,27 只雄性,14 只雌性)进行了 5.8-7.2 Gy(LD29-50/60)辐照,其中包括一些接受过伽马-生育三烯酚(GT3,一种辐射对策)治疗的猕猴。我们与武装部队放射生物学研究所/统一服务卫生科学大学合作,在辐照前、辐照后 1、2、3、35 和 60 天后,将猕猴的外周全血(1 毫升)收集到 PAXgene® 血液 RNA 管中,储存在 -80°C 温度下,然后运送到联邦国防军放射生物学研究所。分离 RNA(QIAsymphony),将其转化为 cDNA,并进行定量 RT-PCR。测量相对于辐照前猕猴样本的差异基因表达(DGE)。在辐照后的头三天内,我们发现了与人类数据相似的结果:1.FDXR和DDB2被上调,FDXR的中位数高达3.5倍,DDB2的中位数高达13.5倍;2.几乎所有猕猴的POU2AF1都出现了10倍左右的下调;3.与人类数据相反,DDB2比FDXR的上调幅度更大,折叠变化(FC)的差异在2.4到10之间,而WNT3的折叠变化中位数(第1天和第35天除外)接近1。然而,46%的猕猴在辐照后第1天出现了WNT3下调,在辐照后第3天降至12.2%。考虑到延长阶段,在第35天时出现了折叠变化减少的趋势,折叠变化中位数从DDB2的0.7到POU2AF1的0.1不等,在辐照后第60天,存活动物体内所有四个基因的DGE都接近辐照前的值。总之,在该猕猴模型中,FDXR、DDB2 和 POU2AF1 对辐射诱导的 H-ARS 严重程度预测的诊断意义得到了证实。但 DDB2 的 GE 值高于 FDXR。正如之前的研究所示,WNT3 的诊断意义无法在猕猴中再现;这可能是由于动物模型的选择和方法学上的挑战。
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引用次数: 0
Introduction for the ConRad 2023 Focus Issue. ConRad 2023 焦点问题简介。
IF 3.4 3区 医学 Q2 BIOLOGY Pub Date : 2024-05-01 DOI: 10.1667/RADE-24-INTRO.1
Colonel Mc Prof Dr Matthias Port
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引用次数: 0
PUM1 and PGK1 are Favorable Housekeeping Genes over Established Biodosimetry-related Housekeeping Genes such as HPRT1, ITFG1, DPM1, MRPS5, 18S rRNA and Others after Radiation Exposure. 在辐射暴露后,PUM1 和 PGK1 是优于 HPRT1、ITFG1、DPM1、MRPS5、18S rRNA 等已建立的生物测定相关管家基因的管家基因。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-05-01 DOI: 10.1667/RADE-23-00160.1
R Muhtadi, S Stewart, F Bunert, O O Fatanmi, S Y Wise, C Gärtner, S Motzke, C Ruf, P Ostheim, S Schüle, D Schwanke, V K Singh, M Port, M Abend
<p><p>In gene expression (GE) studies, housekeeping genes (HKGs) are required for normalization purposes. In large-scale inter-laboratory comparison studies, significant differences in dose estimates are reported and divergent HKGs are employed by the teams. Among them, the 18S rRNA HKG is known for its robustness. However, the high abundance of 18S rRNA copy numbers requires dilution, which is time-consuming and a possible source of errors. This study was conducted to identify the most promising HKGs showing the least radiation-induced GE variance after radiation exposure. In the screening stage of this study, 35 HKGs were analyzed. This included selected HKGs (ITFG1, MRPS5, and DPM1) used in large-scale biodosimetry studies which were not covered on an additionally employed pre-designed 96-well platform comprising another 32 HKGs used for different exposures. Altogether 41 samples were examined, including 27 ex vivo X-ray irradiated blood samples (0, 0.5, 4 Gy), six X-irradiated samples (0, 0.5, 5 Gy) from two cell lines (U118, A549), as well as eight non-irradiated tissue samples to encompass multiple biological entities. In the independent validation stage, the most suitable candidate genes were examined from another 257 blood samples, taking advantage of already stored material originating from three studies. These comprise 100 blood samples from ex vivo X-ray irradiated (0-4 Gy) healthy donors, 68 blood samples from 5.8 Gy irradiated (cobalt-60) Rhesus macaques (RM) (LD29/60) collected 0-60 days postirradiation, and 89 blood samples from chemotherapy-(CTx) treated breast tumor patients. CTx and radiation-induced GE changes in previous studies appeared comparable. RNA was isolated, converted into cDNA, and GE was quantified employing TaqMan assays and quantitative RT-PCR. We calculated the standard deviation (SD) and the interquartile range (IQR) as measures of GE variance using raw cycle threshold (Ct) values and ranked the HKGs accordingly. Dose, time, age, and sex-dependent GE changes were examined employing the parametrical t-test and non-parametrical Kruskal Wallis test, as well as linear regression analysis. Generally, similar ranking results evolved using either SD or IQR GE measures of variance, indicating a tight distribution of GE values. PUM1 and PGK1 showed the lowest variance among the first ten most suitable genes in the screening phase. MRPL19 revealed low variance among the first ten most suitable genes in the screening phase only for blood and cells, but certain comparisons indicated a weak association of MRPL19 with dose (P = 0.02-0.09). In the validation phase, these results could be confirmed. Here, IQR Ct values from, e.g., X-irradiated blood samples were 0.6 raw Ct values for PUM1 and PGK1, which is considered to represent GE differences as expected due to methodological variance. Overall, when compared, the GE variance of both genes was either comparable or lower compared to 18S rRNA. Compared with the IQR GE values of
在基因表达(GE)研究中,需要用看家基因(HKGs)进行归一化处理。在大规模实验室间比对研究中,由于剂量估计值存在显著差异,研究小组采用了不同的 HKG。其中,18S rRNA HKG 以其稳健性而著称。然而,18S rRNA 拷贝数的高丰度需要稀释,这既费时又可能造成误差。本研究旨在找出最有前途的香港开奖现场结果直播,这些香港开奖现场结果直播在辐照后显示出最小的辐照诱导 GE 变异。在本研究的筛选阶段,分析了 35 种香港组蛋白。其中包括在大规模生物模拟研究中使用的部分 HKGs(ITFG1、MRPS5 和 DPM1),这些 HKGs 未被预先设计的 96 孔平台所覆盖,该平台由另外 32 个用于不同辐照的 HKGs 组成。共检测了 41 个样本,包括 27 个体内外 X 射线辐照血液样本(0、0.5、4 Gy)、6 个来自两个细胞系(U118、A549)的 X 射线辐照样本(0、0.5、5 Gy)以及 8 个非辐照组织样本,以涵盖多个生物实体。在独立验证阶段,利用三项研究中已储存的材料,对另外 257 份血液样本中最合适的候选基因进行了检验。其中包括 100 份来自体外 X 射线照射(0-4 Gy)健康供体的血液样本、68 份来自 5.8 Gy 照射(钴-60)猕猴(RM)(LD29/60)的血液样本(收集时间为照射后 0-60 天),以及 89 份来自化疗(CTx)乳腺肿瘤患者的血液样本。在以前的研究中,CTx 和辐射诱导的基因组学变化具有可比性。我们分离了 RNA 并将其转化为 cDNA,然后使用 TaqMan 检测法和定量 RT-PCR 对 GE 进行量化。我们使用原始周期阈值(Ct)计算标准差(SD)和四分位数间距(IQR),以此衡量基因组差异,并据此对香港基因组进行排序。通过参数 t 检验和非参数 Kruskal Wallis 检验以及线性回归分析,研究了剂量、时间、年龄和性别对 GE 变化的影响。一般来说,使用 SD 或 IQR GE 方差计量法得出的排名结果相似,表明 GE 值分布紧密。在筛选阶段的前十个最合适基因中,PUM1 和 PGK1 的方差最小。在筛选阶段,MRPL19 在前十个最合适的基因中只有血液和细胞的方差较低,但某些比较表明 MRPL19 与剂量有微弱的关联(P = 0.02-0.09)。在验证阶段,这些结果得到了证实。在这里,PUM1 和 PGK1 的 IQR Ct 值与 X 射线照射血液样本等的原始 Ct 值相差 0.6,这被认为是方法学差异导致的预期 GE 差异。总体而言,与 18S rRNA 相比,这两个基因的 GE 方差相当或更小。与 PUM1 和 PGKI 的 IQR GE 值相比,生物测定香港组 HPRT1 的 GE 值增加了 2.5 倍,生物测定香港组 ITFG1、MRPS5 和 DPM1 的 GE 值与之相当。发现 ITFG1 和 MRPS5 存在显著的剂量依赖关系(P = 0.001-0.07),而 HPRT1 和 DPM1 则普遍不存在或关系较弱(P = 0.02-0.07)。总之,考虑到基因变异和基因变异与剂量的不良关联,在所研究的 35 种香港基因中,PUM1 和 PGK1 最有希望用于辐照研究。
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引用次数: 0
CPNE1, A Potential Therapeutic Target in Nasopharyngeal Carcinoma, Affects Cell Growth and Radiation Resistance. 鼻咽癌的潜在治疗靶点 CPNE1 影响细胞生长和抗辐射能力
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00220.1
Shujuan Zhu, Rui Li, Kun Yin, Liming Wu

The increased expression of Copine 1 (CPNE1) has been observed in various cancers, which promotes cell proliferation, apoptosis, and radio resistance. However, the potential mechanism of CPNE1 in nasopharyngeal carcinoma (NPC) remains elusive. Consequently, our objective was to investigate the role of CPNE1 in regulating proliferation and radio resistance of NPC. CPNE1 expression in NPC and normal patients were obtained from Cancer Genome Atlas (TCGA) database. An elevated CPNE1 was observed in NPC patients and cells (C666-1, SUNE-1, and HNE-1). Then, C666-1 and SUNE-1 cells were subjected to si-CPNE1 under different radiations (0-8 Gy). Cell growth and proliferation were measured by CCK8 and EDU assays, which demonstrated si-CPNE1 suppressed proliferation. Colony formation was performed to detect cell viability under different radiation therapy and survival curve of cell was plotted, which indicated that CPNE1 knockdown improved cell radiosensitivity. Additionally, flow cytometry showed silence of CPNE1 enhanced apoptosis rate in radiated cells. To further investigate the mechanisms of CPNE1 regulating NPC, the expression of activated phosphate Akt (p-Akt) was assessed through western blotting. We observed elevated p-Akt in si-CPNE1 transfected C666-1 and SUNE-1 cells. In conclusion, these results demonstrated that CPNE1 expression is elevated in nasopharyngeal carcinoma cells, and its silencing could attenuate nasopharyngeal carcinoma advancement and improve radiosensitivity to radiation therapy by controlling Akt activation.

在多种癌症中都观察到了 Copine 1(CPNE1)的表达增加,它能促进细胞增殖、凋亡和放射抗性。然而,CPNE1在鼻咽癌(NPC)中的潜在作用机制仍不明确。因此,我们的目的是研究 CPNE1 在调节鼻咽癌增殖和放射抗性中的作用。我们从癌症基因组图谱(TCGA)数据库中获得了鼻咽癌和正常患者中 CPNE1 的表达情况。在鼻咽癌患者和细胞(C666-1、SUNE-1和HNE-1)中观察到了CPNE1的升高。然后,C666-1 和 SUNE-1 细胞在不同辐射(0-8 Gy)下接受 si-CPNE1 治疗。通过 CCK8 和 EDU 检测细胞的生长和增殖,结果表明 si-CPNE1 抑制了细胞的增殖。通过集落形成检测细胞在不同放射治疗下的存活率,并绘制细胞存活曲线,结果表明敲除 CPNE1 提高了细胞的放射敏感性。此外,流式细胞术显示,CPNE1的沉默提高了受辐射细胞的凋亡率。为了进一步研究 CPNE1 调控鼻咽癌的机制,我们通过 Western 印迹技术评估了活化磷酸化 Akt(p-Akt)的表达。我们在 si-CPNE1 转染的 C666-1 和 SUNE-1 细胞中观察到 p-Akt 的升高。总之,这些结果表明,CPNE1在鼻咽癌细胞中表达升高,而沉默CPNE1可以通过控制Akt的活化来减轻鼻咽癌的恶化并提高放疗的放射敏感性。
{"title":"CPNE1, A Potential Therapeutic Target in Nasopharyngeal Carcinoma, Affects Cell Growth and Radiation Resistance.","authors":"Shujuan Zhu, Rui Li, Kun Yin, Liming Wu","doi":"10.1667/RADE-23-00220.1","DOIUrl":"10.1667/RADE-23-00220.1","url":null,"abstract":"<p><p>The increased expression of Copine 1 (CPNE1) has been observed in various cancers, which promotes cell proliferation, apoptosis, and radio resistance. However, the potential mechanism of CPNE1 in nasopharyngeal carcinoma (NPC) remains elusive. Consequently, our objective was to investigate the role of CPNE1 in regulating proliferation and radio resistance of NPC. CPNE1 expression in NPC and normal patients were obtained from Cancer Genome Atlas (TCGA) database. An elevated CPNE1 was observed in NPC patients and cells (C666-1, SUNE-1, and HNE-1). Then, C666-1 and SUNE-1 cells were subjected to si-CPNE1 under different radiations (0-8 Gy). Cell growth and proliferation were measured by CCK8 and EDU assays, which demonstrated si-CPNE1 suppressed proliferation. Colony formation was performed to detect cell viability under different radiation therapy and survival curve of cell was plotted, which indicated that CPNE1 knockdown improved cell radiosensitivity. Additionally, flow cytometry showed silence of CPNE1 enhanced apoptosis rate in radiated cells. To further investigate the mechanisms of CPNE1 regulating NPC, the expression of activated phosphate Akt (p-Akt) was assessed through western blotting. We observed elevated p-Akt in si-CPNE1 transfected C666-1 and SUNE-1 cells. In conclusion, these results demonstrated that CPNE1 expression is elevated in nasopharyngeal carcinoma cells, and its silencing could attenuate nasopharyngeal carcinoma advancement and improve radiosensitivity to radiation therapy by controlling Akt activation.</p>","PeriodicalId":20903,"journal":{"name":"Radiation research","volume":" ","pages":"310-316"},"PeriodicalIF":2.5,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139735885","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advanced Technologies in Radiation Research. 辐射研究先进技术。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-24-00003.1
Carmen I Rios, Andrea L DiCarlo, Lynn Harrison, Pataje G S Prasanna, Jeffrey C Buchsbaum, Michael W Rudokas, Lauren A Gomes, Thomas A Winters

The U.S. Government is committed to maintaining a robust research program that supports a portfolio of scientific experts who are investigating the biological effects of radiation exposure. On August 17 and 18, 2023, the Radiation and Nuclear Countermeasures Program, within the National Institute of Allergy and Infectious Diseases, National Institutes of Health (NIH), partnered with the National Cancer Institute, NIH, the National Aeronautics and Space Administration, and the Radiation Injury Treatment Network to convene a workshop titled, Advanced Technologies in Radiation Research (ATRR), which focused on the use of advanced technologies under development or in current use to accelerate radiation research. This meeting report provides a comprehensive overview of the research presented at the workshop, which included an assembly of subject matter experts from government, industry, and academia. Topics discussed during the workshop included assessments of acute and delayed effects of radiation exposure using modalities such as clustered regularly interspaced short palindromic repeats (CRISPR) - based gene editing, tissue chips, advanced computing, artificial intelligence, and immersive imaging techniques. These approaches are being applied to develop products to diagnose and treat radiation injury to the bone marrow, skin, lung, and gastrointestinal tract, among other tissues. The overarching goal of the workshop was to provide an opportunity for the radiation research community to come together to assess the technological landscape through sharing of data, methodologies, and challenges, followed by a guided discussion with all participants. Ultimately, the organizers hope that the radiation research community will benefit from the workshop and seek solutions to scientific questions that remain unaddressed. Understanding existing research gaps and harnessing new or re-imagined tools and methods will allow for the design of studies to advance medical products along the critical path to U.S. Food and Drug Administration approval.

美国政府致力于维持一个强大的研究计划,为研究辐照生物效应的科学专家组合提供支持。2023 年 8 月 17 日和 18 日,美国国立卫生研究院(NIH)国家过敏与传染病研究所内的辐射与核对策计划与美国国立卫生研究院国家癌症研究所、美国国家航空航天局和辐射伤害治疗网络合作,召开了题为 "辐射研究中的先进技术(ATRR)"的研讨会,重点讨论如何利用正在开发或正在使用的先进技术来加速辐射研究。本会议报告全面概述了研讨会上的研究成果,与会者包括来自政府、行业和学术界的主题专家。研讨会上讨论的主题包括利用基于聚类规则间隔短回文重复序列 (CRISPR) 的基因编辑、组织芯片、先进计算、人工智能和沉浸式成像技术等模式对辐照的急性和延迟效应进行评估。这些方法正被用于开发诊断和治疗骨髓、皮肤、肺部和胃肠道等组织辐射损伤的产品。研讨会的总体目标是为辐射研究界提供一个机会,通过分享数据、方法和挑战,共同评估技术状况,然后在指导下与所有与会者进行讨论。最终,组织者希望辐射研究界能从此次研讨会中受益,并为尚未解决的科学问题寻求解决方案。了解现有的研究差距,利用新的或重新构想的工具和方法,将有助于设计研究,推动医疗产品通过美国食品药品管理局审批的关键之路。
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引用次数: 0
Highlighting the NIAID Radiation and Nuclear Countermeasures Program's Commitment to Training and Diversifying the Radiation Workforce. 强调美国国立卫生研究院(NIAID)辐射与核对策计划致力于培训辐射工作人员并使其多样化。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00207.1
Olivia Molinar-Inglis, LeShawndra N Price, Andrea L DiCarlo

Developing and maintaining a robust and diverse scientific workforce is crucial to advance knowledge, drive innovation, and tackle societal issues that impact the economy and human health. The shortage of trained professionals in radiation and nuclear sciences derives from many factors, such as scarcity of specialized coursework, programming, professional development, and experiential learning at educational institutions, which significantly disrupt the training pipeline. Other challenges include small numbers of faculty and educators with specialized radiation/nuclear expertise that are continually overextended professionally and scientifically, with the burden of training falling on this subset of individuals. Even more alarming is the recent loss of radiobiologists due to increased retirements and deaths, leaving the radiobiology community with a void of mentors and knowledge. Lastly, inconsistency in acquiring stable grant funding to recruit and retain scientists is a major hurdle to training the next generation of radiation and nuclear scientists. Recommendations from the scientific community and the National Academies of Sciences, Engineering, and Medicine describe the need to bolster educational resources and provide more hands-on training experiences. Of equal importance was the suggestion that funding agencies provide more opportunities for training and tracking the radiation workforce. The Radiation and Nuclear Countermeasures Program (RNCP), and the Office of Research Training and Special Programs (ORTSP), both within the National Institute of Allergy and Infectious Diseases (NIAID) are committed to helping to develop and sustain the radiation research workforce. This commentary illustrates the importance of addressing radiation workforce development and outlines steps that the RNCP is taking to help mitigate the issue. In addition, the role for Diversity, Equity, Inclusion, and Accessibility (DEIA) in helping to increase the number of students trained in the radiation sciences is discussed, and the NIH's DEIA priorities and RNCP efforts to improve DEIA in the research community are highlighted. One of the main goals of this commentary is to provide awareness of available educational (i.e., development of a radiation biologist eBook) and funding resources. A summary of available awards targeting early- to mid-stage investigators and diversity candidates is given, and it is hoped that this list, although not exhaustive and not specific for all focus areas in radiation (e.g., cancer research), will encourage more radiation biologists to explore and apply to these under-utilized opportunities.

培养和保持一支强大而多元化的科学人才队伍,对于推动知识进步、推动创新、解决影响经济和人类健康的社会问题至关重要。辐射与核科学领域训练有素的专业人员短缺的原因有很多,例如教育机构缺乏专业课程、计划、职业发展和体验式学习,这极大地扰乱了培训渠道。其他挑战还包括少数具有辐射/核专业技能的教师和教育工作者在专业和科学方面持续超负荷工作,培训的重担落在了这部分人身上。更令人担忧的是,最近由于退休和死亡人数的增加,放射生物学专家流失严重,导致放射生物学界导师和知识匮乏。最后,在招聘和留住科学家方面难以获得稳定的资助,这也是培养下一代辐射与核科学家的一大障碍。科学界和美国国家科学院、工程院和医学院的建议指出,需要加强教育资源,提供更多的实践培训经验。同样重要的是,建议资助机构提供更多培训和跟踪辐射工作人员的机会。美国国家过敏与传染病研究所(NIAID)下属的辐射与核对策计划(RNCP)和研究培训与特别计划办公室(ORTSP)致力于帮助发展和维持辐射研究人员队伍。本评论说明了解决辐射研究人员队伍发展问题的重要性,并概述了国家过敏与传染病研究所正在采取的有助于缓解这一问题的措施。此外,还讨论了 "多样性、公平性、包容性和无障碍性"(DEIA)在帮助增加接受辐射科学培训的学生人数方面的作用,并强调了美国国立卫生研究院(NIH)的 "多样性、公平性、包容性和无障碍性"(DEIA)优先事项以及 RNCP 为改善研究界的 "多样性、公平性、包容性和无障碍性"(DEIA)所做的努力。本评论的主要目的之一是让人们了解现有的教育(即开发辐射生物学家电子书)和资金资源。本评论概述了针对早中期研究人员和多样性候选人的可用奖项,希望这份清单(尽管并非详尽无遗,也并非针对辐射领域的所有重点领域(如癌症研究))能鼓励更多辐射生物学家探索和申请这些未得到充分利用的机会。
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引用次数: 0
Investigation of the Impact of Temporal Dose Delivery Patterns of Ion Irradiation with the Local Effect Model. 利用局部效应模型研究离子照射的时间剂量投放模式的影响
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00074.1
Lisa Herr, Thomas Friedrich, Marco Durante, Michael Scholz

We present an extension of the Local Effect Model (LEM) to include time-dose relationships for predicting effects of protracted and split-dose ion irradiation at arbitrary LET. With this kinetic extension, the spatial and temporal induction and processing of DNA double strand breaks (DSB) in cellular nuclei can be simulated for a wide range of ion radiation qualities, doses and dose rates. The key concept of the extension is based on the joint spatial and temporal coexistence of initial DSB, leading to the formation of clustered DNA damage on the µm scale (as defined e.g., by the size scale of Mbp chromatin loops), which is considered to have an increased cellular lethality as compared to isolated, single DSB. By simulating the time dependent induction and repair of DSB and scoring of isolated and clustered DSB upon irradiation, the impact of dose rate and split dose on the cell survival probability can be computed. In a first part of this work, we systematically analyze the predicted impact of protraction in dependence of factors like dose, LET, ion species and radiosensitivity as characterized by the photon LQ-parameters. We establish links to common concepts that describe dose rate effects for low LET radiation. We also compare the model predictions to experimental data and find agreement with the general trends observed in the experiments. The relevant concepts of our approach are compared to other models suitable for predicting time effects. We investigate an apparent analogy between spatial and temporal concentration of radiation delivery, both leading to increased effectiveness, and discuss similarities and differences between the general dependencies of these clustering effects on their impacting factors. Finally, we conclude that the findings give additional support for the general concept of the LEM, i.e. the characterization of high LET radiation effects based on the distinction of just two classes of DSB (isolated DSB and clustered DSB).

我们对局部效应模型(LEM)进行了扩展,将时间-剂量关系纳入其中,以预测在任意 LET 下长时间和分剂量离子辐照的效应。有了这一动力学扩展,就能在广泛的离子辐射质量、剂量和剂量率范围内模拟细胞核中DNA双链断裂(DSB)的时空诱导和处理过程。扩展的关键概念是基于初始 DSB 在空间和时间上的共存,从而形成微米级(例如,根据 Mbp 染色质环的大小定义)的成簇 DNA 损伤,与孤立的单个 DSB 相比,这种损伤被认为具有更高的细胞致死率。通过模拟辐照时DSB的随时间变化的诱导和修复以及孤立和成簇DSB的评分,可以计算出剂量率和分裂剂量对细胞存活概率的影响。在这项工作的第一部分,我们系统分析了根据剂量、LET、离子种类和辐射敏感性(以光子 LQ 参数为特征)等因素预测的辐照延时的影响。我们与描述低 LET 辐射剂量率效应的常见概念建立了联系。我们还将模型预测与实验数据进行了比较,发现模型预测与实验中观察到的一般趋势一致。我们将我们方法的相关概念与其他适合预测时间效应的模型进行了比较。我们研究了辐射传递的空间和时间集中之间的明显类比,两者都会导致有效性的提高,并讨论了这些集群效应对其影响因素的一般依赖性之间的异同。最后,我们得出结论,这些研究结果进一步支持了 LEM 的一般概念,即在区分两类 DSB(孤立 DSB 和集群 DSB)的基础上描述高 LET 辐射效应。
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引用次数: 0
Consumption of Apigenin Prevents Radiation-induced Gut Dysbiosis in Male C57BL/6J Mice Exposed to Silicon Ions. 食用芹菜素可预防暴露于硅离子的雄性 C57BL/6J 小鼠因辐射引起的肠道菌群失调。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00110.1
Kanokporn Noy Rithidech, Tanat Peanlikhit, Louise Honikel, Jinyu Li, Jingxuan Liu, Tobias Karakach, Thomas Zimmerman, James Welsh

The search for medical treatments to prevent radiation-induced damage to gastrointestinal tissue is crucial as such injuries can be fatal. This study aimed to investigate the effects of apigenin (AP) on the gut microbiome of irradiated mice, as it is a promising radiation countermeasure. Male C57BL/6J mice were divided into four groups, with six mice in each group. Two groups were given food with apigenin (20 mg/kg body weight or AP 20) before and after exposure to 0 or 50 cGy of silicon (28Si) ions, while another two groups of mice received regular diet without apigenin (0 mg/kg body weight or AP 0) before and after irradiation. The duodenum, the primary site for oral AP absorption, was collected from each mouse seven days after radiation exposure. Using 16S rRNA amplicon sequencing, we found significant differences in microbial diversity among groups. Firmicutes and Bacteroidetes were the major phyla for all groups, while actinobacterial and proteobacterial sequences represented only a small percentage. Mice not given dietary apigenin had a higher Firmicutes and Bacteroidetes (F/B) ratio and an imbalanced duodenal microbiota after exposure to radiation, while irradiated mice given apigenin had maintained homeostasis of the microbiota. Additionally, irradiated mice not given apigenin had decreased probiotic bacteria abundance and increased inflammation, while apigenin-supplemented mice had reduced inflammation and restored normal histological structure. In conclusion, our results demonstrate the potential of dietary apigenin as a countermeasure against radiation-induced gut injuries due to its anti-inflammatory activity, reduction of gut microbiota dysbiosis, and increase in probiotic bacteria (e.g., Lachnospiraceae, Muribaculaceae and Bifidobacteriaceae).

寻找预防辐射引起的胃肠道组织损伤的医疗方法至关重要,因为这种损伤可能是致命的。本研究旨在调查芹菜素(AP)对辐照小鼠肠道微生物组的影响,因为芹菜素是一种很有前景的辐射对策。雄性 C57BL/6J 小鼠被分为四组,每组六只。两组小鼠在接受 0 或 50 cGy 硅(28Si)离子照射前后食用含有芹菜素(20 毫克/千克体重或 AP 20)的食物,另外两组小鼠在接受照射前后食用不含芹菜素(0 毫克/千克体重或 AP 0)的普通食物。每只小鼠的十二指肠是口服芹菜素吸收的主要部位,在辐照七天后采集十二指肠。通过 16S rRNA 扩增子测序,我们发现各组之间的微生物多样性存在显著差异。固着菌和类杆菌是所有组的主要门类,而放线菌和蛋白菌序列只占很小的比例。未摄入芹菜素的小鼠的固着菌和类杆菌(F/B)比率较高,且在受到辐射后十二指肠微生物群失衡,而摄入芹菜素的辐照小鼠则保持了微生物群的平衡。此外,未服用芹菜素的辐照小鼠益生菌数量减少,炎症加剧,而服用芹菜素的小鼠炎症减轻,组织结构恢复正常。总之,我们的研究结果表明,膳食芹菜素具有抗炎活性,可减少肠道微生物群失调,增加益生菌(如漆螺菌科、木里杆菌科和双歧杆菌科),因此有可能成为抗辐射引起的肠道损伤的一种对策。
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引用次数: 0
The Use of Joint Models in Analysis of Aggregate Endpoints in RERF Cohort Studies. 在 RERF 队列研究的总体终点分析中使用联合模型。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00122.1
Richard Sposto, Harry M Cullings

In radiation risk estimation based on the Radiation Effects Research Foundation (RERF) cohort studies, one common analysis is Poisson regression on radiation dose and background and effect modifying variables of an aggregate endpoint such as all solid cancer incidence or all non-cancer mortality. As currently performed, these analyses require selection of a surrogate radiation organ dose, (e.g., colon dose), which could conceptually be problematic since the aggregate endpoint comprises events arising from a variety of organs. We use maximum likelihood theory to compare inference from the usual aggregate endpoint analysis to analyses based on joint analysis. These two approaches are also compared in a re-analysis of RERF Life Span Study all cancer mortality. We show that, except for a trivial difference, these two analytic approaches yield identical inference with respect to radiation dose response and background and effect modification when based on a single surrogate organ radiation dose. When repeating the analysis with organ-specific doses, an interesting issue of bias in intercept parameters arises when dose estimates are undefined for one sex when sex-specific outcomes are included in the aggregate endpoint, but a simple correction will avoid this issue. Lastly, while the joint analysis formulation allows use of organ-specific doses, the interpretation of such an analysis for inference regarding an aggregate endpoint can be problematic. To the extent that analysis of radiation risk for an aggregate endpoint is of interest, the joint-analysis formulation with a single surrogate dose is an appropriate analytic approach, whereas joint analysis with organ-specific doses may only be interpretable if endpoints are considered separately for estimating dose response. However, for neither approach is inference about dose response well defined.

在以辐射效应研究基金会(RERF)队列研究为基础的辐射风险评估中,一种常见的分析方法是对辐射剂量和本底以及综合终点(如所有实体癌发病率或所有非癌症死亡率)的效应修正变量进行泊松回归。按照目前的做法,这些分析需要选择一个替代辐射器官剂量(如结肠剂量),这在概念上可能存在问题,因为总体终点包括来自各种器官的事件。我们使用最大似然法理论,将通常的总体终点分析推论与基于联合分析的推论进行比较。我们还在对 RERF 寿命研究中所有癌症死亡率的重新分析中对这两种方法进行了比较。我们发现,除了一个微小的差别外,这两种分析方法在基于单一替代器官辐射剂量时,在辐射剂量反应、本底和效应修正方面得出的推论是相同的。在使用器官特异性剂量重复分析时,如果在综合终点中包含性别特异性结果,而某一性别的剂量估计值未定义,则会出现截距参数偏差的有趣问题,但简单的校正可以避免这一问题。最后,虽然联合分析表述允许使用器官特异性剂量,但在推断总体终点时对这种分析的解释可能存在问题。如果对综合终点的辐射风险分析有兴趣,采用单一替代剂量的联合分析方法是一种合适的分析方法,而采用器官特异性剂量的联合分析方法可能只有在单独考虑终点以估计剂量反应时才能解释。不过,这两种方法都没有明确界定剂量反应的推论。
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引用次数: 0
Dose Rate Effects on Hydrated Electrons, Hydrogen Peroxide, and a OH Radical Molecular Probe Under Clinical Energy Protons. 临床能量质子对水合电子、过氧化氢和 OH 自由基分子探针的剂量率影响。
IF 2.5 3区 医学 Q2 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1667/RADE-23-00244.1
Tamon Kusumoto, Antoine Danvin, Taisei Mamiya, Aurelia Arnone, Severine Chefson, Catherine Galindo, Philippe Peaupardin, Quentin Raffy, Nagaaki Kamiguchi, Daizo Amano, Kenzo Sasai, Teruaki Konishi, Satoshi Kodaira

We report the dose rate dependence of radiation chemical yields (G value) of water radiolysis products under clinical energy protons (230 MeV) to understand mechanisms of the FLASH radiotherapy performed at ultra-high dose rate (>40 Gy/s). The G value of 7-hydoroxy-coumarin-3-carboxylic acid (7OH-C3CA) produced by reactions of coumarin-3-carboxylic acid (C3CA) with OH radicals and oxygen is evaluated by fluorescence method. Also, those of hydrated electrons and hydrogen peroxide are derived by absorption method using Saltzman and Ghomley techniques, respectively. Both G values of 7OH-C3CA and hydrated electrons decrease with increasing dose rate. The relative evolution of 7OH-C3CA is -39 ± 2% between 0.1 and 50 Gy/s. This value is higher than that of hydrated electrons, measured at -21 ± 4%. The G value of hydrogen peroxide in ultra-pure water also decreases with increasing dose rate. In comparison to these findings, we represent the increase of the G value of hydrogen peroxide with increasing dose rate in the mixture solution of MeOH and NaNO3, which act as scavengers of OH radicals and hydrated electrons, respectively, that decompose hydrogen peroxide. This finding indicates that a complex track structure can be expected with increasing dose rate and the reduction of OH radicals by forming hydrogen peroxide would be related to the sparing effect of healthy tissues.

我们报告了在临床能量质子(230 MeV)作用下水辐射分解产物的辐射化学产率(G 值)与剂量率的关系,以了解在超高剂量率(>40 Gy/s)下进行 FLASH 放射治疗的机理。通过荧光方法评估了香豆素-3-羧酸(C3CA)与羟基自由基和氧反应生成的 7-羟基香豆素-3-羧酸(7OH-C3CA)的 G 值。此外,水合电子和过氧化氢的 G 值也分别通过 Saltzman 和 Ghomley 技术的吸收法得出。随着剂量率的增加,7OH-C3CA 和水合电子的 G 值都会降低。在 0.1 至 50 Gy/s 之间,7OH-C3CA 的相对变化率为 -39 ± 2%。这一数值高于水合电子的-21 ± 4%。超纯水中过氧化氢的 G 值也随着剂量率的增加而降低。与这些发现相比,我们发现过氧化氢在 MeOH 和 NaNO3 混合溶液中的 G 值随着剂量率的增加而增加,MeOH 和 NaNO3 分别作为羟自由基和水合电子的清除剂分解过氧化氢。这一发现表明,随着剂量率的增加,可能会出现复杂的轨迹结构,通过形成过氧化氢来减少 OH 自由基与健康组织的疏通效果有关。
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引用次数: 0
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