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Filamentous fungi, and their antifungal susceptibilities, isolated from patients at an oncology hospital in Turkey. 丝状真菌及其抗真菌敏感性,从土耳其一家肿瘤医院的患者中分离出来。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-03-21 DOI: 10.1016/j.riam.2026.01.003
Ayşe Semra Güreser, Nilgün Karabıçak, Serap Süzük Yıldız, Mert Emre Ölmez, İpek Mumcuoğlu, Neşe İnan, Turgay Ulaş, Mehmet Sinan Dal, Gülşen İskender, Tuba Dal

Background: Fungal infections affect especially to patients with cancer and those who are immunocompromised.

Aims: We analysed the prevalence of filamentous fungi in patients at Ankara Oncology Education and Research Hospital from 2022 to 2024; antifungal susceptibility tests were also carried out.

Methods: Filamentous fungi were analyzed by MALDI-TOF (matrix-assisted laser desorption ionization-time of flight), and antifungal susceptibility was tested by the broth microdilution method.

Results: Filamentous fungi were recovered from 66 (6.5%) of 1,020 samples: 31(47%) deep tracheal aspirates, 13 (19.7%) sputum, 10 (15.2%) ear swabs, 9 (13.6%) biopsies, and three (4.5%) bronchoalveolar lavage samples. Filamentous fungi other than Aspergillus grew from 10 (15.2%) samples, while Aspergillus species were recovered in 56 (84.8%). Of the 56 Aspergillus, 21 (31.8%) were Aspergillus fumigatus, 15 (22.7%) were Aspergillus flavus, 14 (21.2%) were Aspergillus niger, 3 (4.5%) were Aspergillus terreus, and one strain (1.5%) each of the following species were identified: Aspergillus tamarii, Aspergillus nidulans, and Aspergillus calidoustus. Of 66 patients from whom a fungal isolate was recovered, 50 (75.8%) had cancer. Minimum inhibitory concentrations (MICs) were determined in 45 (80.4%) Aspergillus isolates. Eight (8/19) A. fumigatus, seven (7/13) A. flavus, and three (3/11) A. niger were non-wild type (WT) according to amphotericin B MIC values. Four (4/13) A. flavus and two (2/19) A. fumigatus were non-WT according to itraconazole MIC values. One (1/13) A. flavus was non-WT according to voriconazole MIC value.

Conclusions: The filamentous fungi recovered from the patients showed high antifungal MIC/MEC values, and some isolates had high amphotericin B MICs. Voriconazole was effective in vitro against A. fumigatus.

背景:真菌感染尤其影响癌症患者和免疫功能低下的患者。目的:分析2022 - 2024年安卡拉肿瘤教育与研究医院患者丝状真菌的流行情况;还进行了抗真菌药敏试验。方法:采用基质辅助激光解吸电离飞行时间法(MALDI-TOF)对丝状真菌进行分析,采用肉汤微量稀释法检测丝状真菌的抗真菌敏感性。结果:1020份样本中检出丝状真菌66份(6.5%),其中深气管抽吸31份(47%),痰液13份(19.7%),耳拭子10份(15.2%),活检9份(13.6%),支气管肺泡灌洗3份(4.5%)。除曲霉外,检出丝状真菌10种(15.2%),检出曲霉56种(84.8%)。56种曲霉中,烟曲霉21株(31.8%),黄曲霉15株(22.7%),黑曲霉14株(21.2%),地曲霉3株(4.5%),柽柳曲霉、空心曲霉和石蜡曲霉各1株(1.5%)。在66例分离出真菌的患者中,50例(75.8%)患有癌症。测定了45株(80.4%)曲霉的最低抑菌浓度(mic)。两性霉素B MIC值显示烟曲霉8株(8/19)、黄曲霉7株(7/13)、黑曲霉3株(3/11)为非野生型(WT)。根据伊曲康唑的MIC值,4株(4/13)黄曲霉和2株(2/19)烟曲霉为非wt菌株。根据伏立康唑的MIC值,1(1/13)个黄曲霉属非wt型。结论:检出的丝状真菌具有较高的抗真菌MIC/MEC值,部分分离株具有较高的两性霉素B MIC值。伏立康唑对烟曲霉有较好的体外杀灭效果。
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引用次数: 0
In vitro effects of IFN-γ, IL-4 and IL-27 on human bronchial epithelial cells infected with Cryptococcus neoformans sensu stricto. IFN-γ、IL-4和IL-27对人狭窄感隐球菌感染支气管上皮细胞的影响
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-03-06 DOI: 10.1016/j.riam.2026.01.002
João Batista Camargo Neto, Maiara Medeiros Cunha, Wanessa Maria Dos Santos, Leonardo Euripedes Andrade Silva, Paulo Roberto da Silva, David Nascimento Silva Teixeira, Mario Leon Silva-Vergara, Alexandre Paula Rogerio

Background: The innate immune response and cytokine milieu in airway mucosa, mediated by bronchial epithelial cells, are critical in determining susceptibility or protection against cryptococcosis. In experimental models, Th2 and Th1 responses are linked to susceptibility and protection, respectively, while the roles of other cytokines remain less understood.

Aims: To evaluate the in vitro effects of IL-4, IFN-γ, and IL-27 (100 ng/mL) on human bronchial epithelial cells (BEAS-2B) infected with a strain of C. neoformans sensu stricto (multiplicities of infection [MOI] 1-100).

Methods: Cells were stimulated with each cytokine, followed by C. neoformans infection (MOI 100). After 24 h, supernatants were collected to measure CCL2, IL-6, and IL-8 production. STAT1 and STAT6 activation was analyzed by flow cytometry. Phagocytosis and colony-forming unit assays assessed fungal internalization and growth.

Results: Cytokine-stimulated, infected cells displayed reduced IL-6 and/or CCL2 production and decreased STAT6 activation (IL-4) or STAT1 activation (IL-27, IFN-γ) compared with cells stimulated with C. neoformans sensu stricto or cytokines alone. IL-27 reduced fungal internalization, while IL-4 and IFN-γ increased it. All cytokines promoted higher fungal growth.

Conclusions: The interaction of bronchial epithelial cells stimulated with IL-4, IFN-γ, or IL-27, with yeasts of C. neoformans induced an anti-inflammatory profile in the cells that impaired STAT activation and favored fungal proliferation. These findings suggest that certain cytokine environments within the airway epithelium may create conditions conducive to C. neoformans persistence, potentially influencing the progression of the infection.

背景:由支气管上皮细胞介导的气道黏膜先天免疫反应和细胞因子环境是决定隐球菌病易感性或保护作用的关键。在实验模型中,Th2和Th1反应分别与易感性和保护性有关,而其他细胞因子的作用仍然知之甚少。目的:探讨IL-4、IFN-γ和IL-27 (100 ng/mL)对人支气管上皮细胞(BEAS-2B)感染的体外影响(感染多重度[MOI] 1-100)。方法:用各细胞因子刺激细胞,诱导新生C.感染(MOI 100)。24 h后,收集上清液,测定CCL2、IL-6和IL-8的产生。流式细胞术分析STAT1和STAT6的激活情况。吞噬作用和菌落形成单位测定评估真菌内化和生长。结果:与单纯受细胞因子刺激的新生形梭菌或细胞因子刺激的细胞相比,受细胞因子刺激的感染细胞显示IL-6和/或CCL2产生减少,STAT6激活(IL-4)或STAT1激活(IL-27, IFN-γ)降低。IL-27减少真菌内化,而IL-4和IFN-γ增加真菌内化。所有细胞因子均促进真菌生长。结论:受IL-4、IFN-γ或IL-27刺激的支气管上皮细胞与新生假丝酵母菌的相互作用可诱导细胞的抗炎特征,从而损害STAT激活并促进真菌增殖。这些发现表明,气道上皮内的某些细胞因子环境可能创造有利于新生梭状菌持续存在的条件,可能影响感染的进展。
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引用次数: 0
Environmental continuum of Candidozyma auris: from sapronotic ecology to outbreak prediction and control with a One Health perspective. 金黄色念珠菌的环境连续体:从腐臭生态学到疫情预测与控制的一个健康视角。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-02-26 DOI: 10.1016/j.riam.2026.01.001
Victor Garcia-Bustos

Candidozyma auris (formerly Candida auris) has emerged within just over a decade as one of the most relevant multidrug-resistant fungal pathogens affecting human health worldwide. Its pathogenicity, capacity for skin colonization, environmental persistence, and resistance to antifungal drugs and disinfectants have all contributed to its consolidation as a leading cause of healthcare-associated outbreaks. Nevertheless, increasing evidence indicates that C. auris should not be viewed solely as a nosocomial yeast, but rather as part of a broader environmental continuum encompassing natural habitats, anthropogenic niches, and multiple host species. Environmental isolates have been documented in coastal wetlands, wastewater systems, agricultural products, as well as in diverse animals - including companion animals, reptiles, amphibians, and insects -supporting its classification as a sapronotic pathogen. The near-simultaneous emergence of distinct clades across continents strongly suggests that climate change, agricultural azole exposure, and ecological adaptation have collectively selected strains exhibiting thermotolerance, antifungal resistance, and cross-kingdom persistence, thereby enabling recurrent spillover into human populations. Recent advances in wastewater-based epidemiology demonstrate that C. auris can be detected at the community level, often preceding clinical recognition, while animal colonization underscores its overlooked role in pathogen maintenance and transmission networks. This review synthesizes current evidence on the ecological, evolutionary, and epidemiological determinants of C. auris, positioning outbreaks as amplification phenomena within interconnected ecological systems rather than isolated nosocomial events. Adoption of a One Health framework, integrating environmental, veterinary, and human health surveillance, will be essential for predictive outbreak modeling, early detection, and the development of sustainable strategies to mitigate the ongoing and future threats posed by this emerging fungal pathogen.

耳念珠菌(Candidozyma auris)在短短十多年的时间里成为影响全球人类健康的最相关的多重耐药真菌病原体之一。它的致病性、皮肤定植能力、环境持久性以及对抗真菌药物和消毒剂的耐药性都促成了它作为卫生保健相关暴发的主要原因的巩固。然而,越来越多的证据表明,耳念珠菌不应仅仅被视为一种医院酵母菌,而应被视为更广泛的环境连续体的一部分,包括自然栖息地、人为生态位和多种宿主物种。在沿海湿地、废水系统、农产品以及各种动物(包括伴侣动物、爬行动物、两栖动物和昆虫)中都有记录的环境分离物支持其作为腐殖性病原体的分类。跨大陆几乎同时出现的不同分支强烈表明,气候变化、农业唑暴露和生态适应共同选择了表现出耐热性、抗真菌性和跨界持久性的菌株,从而使其能够反复溢出到人类种群中。基于废水的流行病学的最新进展表明,金黄色葡萄球菌可以在社区一级检测到,通常在临床识别之前,而动物定植强调了其在病原体维持和传播网络中被忽视的作用。本综述综合了目前关于耳球菌的生态、进化和流行病学决定因素的证据,将疫情定位为相互关联的生态系统中的放大现象,而不是孤立的医院事件。采用“同一个健康”框架,整合环境、兽医和人类健康监测,对于预测疫情建模、早期发现和制定可持续战略以减轻这种新出现的真菌病原体目前和未来构成的威胁至关重要。
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引用次数: 0
Diagnostic accuracy of ELISA in sporotrichosis: a systematic review and meta-analysis. ELISA诊断孢子虫病的准确性:一项系统回顾和荟萃分析。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-02-26 DOI: 10.1016/j.riam.2025.11.002
Débora Matilde de Almeida, Gabriel Peres Messenburger, Eduarda Santos Bierhals, Sérgio Jorge, Márcia de Oliveira Nobre

Background: Sporotrichosis is a subcutaneous mycosis caused by the traumatic inoculation of dimorphic fungi from the genus Sporothrix. Traditional diagnostic methods, including direct microscopy and fungal culture, are time-consuming, require specialized expertise, and may yield false-negative results.

Aims: This systematic review and meta-analysis aimed to evaluate the diagnostic accuracy of the enzyme-linked immunosorbent assay (ELISA) technique in detecting sporotrichosis in humans and animals.

Methods: A comprehensive literature search was conducted across PubMed, LILACS, EMBASE, Scopus, Web of Science, ScienceDirect, CAPES Periodicals, and the Cochrane Library using both free-text terms and MeSH descriptors. The methodological quality of the studies included was assessed using the QUADAS-2 tool. Pooled sensitivity and specificity were estimated using a random-effects model. Secondary outcomes included the positive and negative likelihood ratios and the diagnostic odds ratio (DOR).

Results: Twelve studies met the inclusion criteria, comprising 1,612 samples (1,350 human and 262 feline). ELISA demonstrated a pooled sensitivity of 91% (95% CI: 85-94) and specificity of 90% (95% CI: 86-93), with a DOR of 94.2 (95% CI: 46.9-189.1). Subgroup analysis revealed higher diagnostic performance in feline samples, particularly when crude antigen extracts and combined fungal forms were used.

Conclusions: ELISA exhibits high diagnostic accuracy for sporotrichosis in both human and veterinary contexts. Its performance, especially in feline hosts, supports its potential role as a reliable diagnostic alternative to conventional methods.

背景:孢子菌病是一种由创伤性接种孢子菌属二形真菌引起的皮下真菌病。传统的诊断方法,包括直接显微镜和真菌培养,耗时,需要专业知识,并可能产生假阴性结果。目的:本系统综述和荟萃分析旨在评估酶联免疫吸附试验(ELISA)技术检测人类和动物孢子虫病的诊断准确性。方法:在PubMed、LILACS、EMBASE、Scopus、Web of Science、ScienceDirect、CAPES期刊和Cochrane图书馆中使用自由文本术语和MeSH描述符进行全面的文献检索。使用QUADAS-2工具评估纳入研究的方法学质量。使用随机效应模型估计合并敏感性和特异性。次要结局包括阳性和阴性似然比和诊断优势比(DOR)。结果:12项研究符合纳入标准,包括1,612个样本(1,350个人类和262个猫)。ELISA的总敏感性为91% (95% CI: 85-94),特异性为90% (95% CI: 86-93), DOR为94.2 (95% CI: 46.9-189.1)。亚群分析显示,在猫样本中,特别是当使用粗抗原提取物和真菌组合形式时,诊断性能更高。结论:ELISA对人类和兽医的孢子虫病都有很高的诊断准确性。它的表现,特别是在猫宿主身上的表现,支持了它作为一种替代传统方法的可靠诊断方法的潜在作用。
{"title":"Diagnostic accuracy of ELISA in sporotrichosis: a systematic review and meta-analysis.","authors":"Débora Matilde de Almeida, Gabriel Peres Messenburger, Eduarda Santos Bierhals, Sérgio Jorge, Márcia de Oliveira Nobre","doi":"10.1016/j.riam.2025.11.002","DOIUrl":"https://doi.org/10.1016/j.riam.2025.11.002","url":null,"abstract":"<p><strong>Background: </strong>Sporotrichosis is a subcutaneous mycosis caused by the traumatic inoculation of dimorphic fungi from the genus Sporothrix. Traditional diagnostic methods, including direct microscopy and fungal culture, are time-consuming, require specialized expertise, and may yield false-negative results.</p><p><strong>Aims: </strong>This systematic review and meta-analysis aimed to evaluate the diagnostic accuracy of the enzyme-linked immunosorbent assay (ELISA) technique in detecting sporotrichosis in humans and animals.</p><p><strong>Methods: </strong>A comprehensive literature search was conducted across PubMed, LILACS, EMBASE, Scopus, Web of Science, ScienceDirect, CAPES Periodicals, and the Cochrane Library using both free-text terms and MeSH descriptors. The methodological quality of the studies included was assessed using the QUADAS-2 tool. Pooled sensitivity and specificity were estimated using a random-effects model. Secondary outcomes included the positive and negative likelihood ratios and the diagnostic odds ratio (DOR).</p><p><strong>Results: </strong>Twelve studies met the inclusion criteria, comprising 1,612 samples (1,350 human and 262 feline). ELISA demonstrated a pooled sensitivity of 91% (95% CI: 85-94) and specificity of 90% (95% CI: 86-93), with a DOR of 94.2 (95% CI: 46.9-189.1). Subgroup analysis revealed higher diagnostic performance in feline samples, particularly when crude antigen extracts and combined fungal forms were used.</p><p><strong>Conclusions: </strong>ELISA exhibits high diagnostic accuracy for sporotrichosis in both human and veterinary contexts. Its performance, especially in feline hosts, supports its potential role as a reliable diagnostic alternative to conventional methods.</p>","PeriodicalId":21291,"journal":{"name":"Revista Iberoamericana De Micologia","volume":" ","pages":""},"PeriodicalIF":1.6,"publicationDate":"2026-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147322252","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isolation of Cryptococcus gattii (genotype VGI) from a specimen of Pinus. An approach to its natural habitat in México City 从松木标本中分离出基因型为VGI的加蒂隐球菌。对其在墨西哥市自然栖息地的探讨。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-25 DOI: 10.1016/j.riam.2025.09.002
Laura Rosio Castañón Olivares, Yurixhi Paola Aguilera León, Fernanda Marlene Moreno Manrique, José Enrique Reyes Lira, Elva Bazán Mora, Edith Sánchez Paredes

Background

In Mexico, Cryptococcus gattii sensu lato has been identified as the etiologic agent in approximately 10.8% of cryptococcosis cases; however, its isolation from natural sources, which would confirm its existence in the environment, has not been successful.

Objective

To isolate C. gattii from environmental samples collected from trees within the movement area of a patient diagnosed with cryptococcosis caused by this species.

Methods

Based on a database of clinical isolates characterized as C. gattii, a patient was contacted and his route of movement was obtained; through a geospatial analysis, nearby trees were located. Tree hollows were sampled and the Cryptococcus isolates obtained were biochemically and genetically typed.

Results

Four Cryptococcus isolates were obtained from the trees Schinus molle, Erythrina coralloides and from a specimen of the genus Pinus: three of them were characterized as Cryptococcus neoformans sensu stricto and one as C. gattii sensu stricto.

Conclusions

Using a geographic information system led to delimit an environmental sampling area, resulting in the first documented report in Mexico of the isolation of C. gattii genotype VGI in nature.
背景:在墨西哥,大约10.8%的隐球菌病病例的病原是加蒂隐球菌。然而,将其与自然资源隔离,这将证实其在环境中的存在,并没有成功。目的:从一确诊为隐球菌病的患者运动区域内树木采集的环境样本中分离出加蒂隐球菌。方法:基于临床分离的加蒂梭菌数据库,对1例患者进行接触,获取其运动路径;通过地理空间分析,找到了附近的树木。对树洞取样,获得隐球菌分离物进行生化和遗传分型。结果:分离得到4株隐球菌,其中3株为狭义新形态隐球菌,1株为狭义加蒂隐球菌。结论:利用地理信息系统划定了环境采样区,从而在墨西哥首次记录了自然中分离到加蒂弓形虫基因型VGI的报告。
{"title":"Isolation of Cryptococcus gattii (genotype VGI) from a specimen of Pinus. An approach to its natural habitat in México City","authors":"Laura Rosio Castañón Olivares,&nbsp;Yurixhi Paola Aguilera León,&nbsp;Fernanda Marlene Moreno Manrique,&nbsp;José Enrique Reyes Lira,&nbsp;Elva Bazán Mora,&nbsp;Edith Sánchez Paredes","doi":"10.1016/j.riam.2025.09.002","DOIUrl":"10.1016/j.riam.2025.09.002","url":null,"abstract":"<div><h3>Background</h3><div>In Mexico, <em>Cryptococcus gattii sensu lato</em> has been identified as the etiologic agent in approximately 10.8% of cryptococcosis cases; however, its isolation from natural sources, which would confirm its existence in the environment, has not been successful.</div></div><div><h3>Objective</h3><div>To isolate <em>C. gattii</em> from environmental samples collected from trees within the movement area of a patient diagnosed with cryptococcosis caused by this species.</div></div><div><h3>Methods</h3><div>Based on a database of clinical isolates characterized as <em>C. gattii</em>, a patient was contacted and his route of movement was obtained; through a geospatial analysis, nearby trees were located. Tree hollows were sampled and the <em>Cryptococcus</em> isolates obtained were biochemically and genetically typed.</div></div><div><h3>Results</h3><div>Four <em>Cryptococcus</em> isolates were obtained from the trees <em>Schinus molle</em>, <em>Erythrina coralloides</em> and from a specimen of the genus <em>Pinus</em>: three of them were characterized as <em>Cryptococcus neoformans sensu stricto</em> and one as <em>C. gattii sensu stricto</em>.</div></div><div><h3>Conclusions</h3><div>Using a geographic information system led to delimit an environmental sampling area, resulting in the first documented report in Mexico of the isolation of <em>C. gattii</em> genotype VGI in nature.</div></div>","PeriodicalId":21291,"journal":{"name":"Revista Iberoamericana De Micologia","volume":"43 1","pages":"Pages 1-6"},"PeriodicalIF":1.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145638235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Infective endocarditis of a prosthetic mechanical valve caused by Trichosporon inkin in an immunocompetent patient: Case report 免疫功能正常患者由三磷酸腺苷墨染引起的假体机械瓣膜感染性心内膜炎一例报告。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-01-01 Epub Date: 2025-12-16 DOI: 10.1016/j.riam.2025.10.002
Maria Jose Amaya , Ana Maria del Pilar Monroy , Natalia Perez , Paula Daniela Villamizar , Juan Pablo Cardenas , Diego Alejandro Pinto Pinzón

Background

Infective endocarditis caused by Trichosporon inkin is an exceptionally rare fungal infection, particularly in immunocompetent patients. This microorganism is part of the normal microbiota of the skin and gastrointestinal tract, but can cause invasive infections associated with prosthetic devices or complex clinical conditions. Reported cases in the literature are scarce, making it difficult to establish standardized diagnostic and therapeutic guidelines.

Case report

We report the case of an immunocompetent female patient with rheumatic fever due to which she underwent a mitral valve replacement procedure using a mechanical prosthesis, who developed infective endocarditis caused by T. inkin. The initial diagnosis was delayed due to misinterpretation as contaminant of the fungal isolate recovered. The patient developed intracerebral hemorrhage and was considered high-risk for surgical intervention; thus, medical management was pursued. The microorganism was finally identified by MALDI-TOF mass spectrometry, a validated tool for identifying Trichosporon species. The patient received voriconazole, with favorable clinical response, followed by prolonged suppressive fluconazole therapy.

Conclusions

This is the second case reported in the Americas and the fifth worldwide of T. inkin infective endocarditis in an immunocompetent patient. It highlights the importance of considering this pathogen in prosthetic valve endocarditis in cases of unusual culture results, and demonstrates the diagnostic value of MALDI-TOF. Long-term antifungal therapy with triazoles, particularly voriconazole followed by fluconazole, may be an effective alternative for patients who are not surgical candidates.
背景:由三磷酸丝虫病引起的感染性心内膜炎是一种非常罕见的真菌感染,特别是在免疫功能正常的患者中。这种微生物是皮肤和胃肠道正常微生物群的一部分,但可引起与假体装置或复杂临床情况相关的侵袭性感染。文献中报告的病例很少,因此很难建立标准化的诊断和治疗指南。病例报告:我们报告一例免疫功能正常的女性风湿热患者,由于她接受了二尖瓣置换术,使用机械假体,谁发展感染性心内膜炎引起T. inkin。由于误读真菌分离物的污染物被恢复,初步诊断被延迟。患者发生脑出血,被认为是手术干预的高危人群;因此,进行了医疗管理。最后用MALDI-TOF质谱法对该微生物进行了鉴定。患者接受伏立康唑治疗,临床反应良好,随后延长氟康唑抑制治疗。结论:这是美洲报告的第二例,也是世界范围内免疫功能正常患者中墨锥虫感染性心内膜炎的第五例。它强调了在异常培养结果的情况下,在人工瓣膜心内膜炎中考虑这种病原体的重要性,并证明了MALDI-TOF的诊断价值。长期使用三唑类抗真菌药物,特别是伏立康唑和氟康唑,可能是不需要手术治疗的患者的有效选择。
{"title":"Infective endocarditis of a prosthetic mechanical valve caused by Trichosporon inkin in an immunocompetent patient: Case report","authors":"Maria Jose Amaya ,&nbsp;Ana Maria del Pilar Monroy ,&nbsp;Natalia Perez ,&nbsp;Paula Daniela Villamizar ,&nbsp;Juan Pablo Cardenas ,&nbsp;Diego Alejandro Pinto Pinzón","doi":"10.1016/j.riam.2025.10.002","DOIUrl":"10.1016/j.riam.2025.10.002","url":null,"abstract":"<div><h3>Background</h3><div>Infective endocarditis caused by <em>Trichosporon inkin</em> is an exceptionally rare fungal infection, particularly in immunocompetent patients. This microorganism is part of the normal microbiota of the skin and gastrointestinal tract, but can cause invasive infections associated with prosthetic devices or complex clinical conditions. Reported cases in the literature are scarce, making it difficult to establish standardized diagnostic and therapeutic guidelines.</div></div><div><h3>Case report</h3><div>We report the case of an immunocompetent female patient with rheumatic fever due to which she underwent a mitral valve replacement procedure using a mechanical prosthesis, who developed infective endocarditis caused by <em>T. inkin</em>. The initial diagnosis was delayed due to misinterpretation as contaminant of the fungal isolate recovered. The patient developed intracerebral hemorrhage and was considered high-risk for surgical intervention; thus, medical management was pursued. The microorganism was finally identified by MALDI-TOF mass spectrometry, a validated tool for identifying <em>Trichosporon</em> species. The patient received voriconazole, with favorable clinical response, followed by prolonged suppressive fluconazole therapy.</div></div><div><h3>Conclusions</h3><div>This is the second case reported in the Americas and the fifth worldwide of <em>T. inkin</em> infective endocarditis in an immunocompetent patient. It highlights the importance of considering this pathogen in prosthetic valve endocarditis in cases of unusual culture results, and demonstrates the diagnostic value of MALDI-TOF. Long-term antifungal therapy with triazoles, particularly voriconazole followed by fluconazole, may be an effective alternative for patients who are not surgical candidates.</div></div>","PeriodicalId":21291,"journal":{"name":"Revista Iberoamericana De Micologia","volume":"43 1","pages":"Pages 23-26"},"PeriodicalIF":1.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145782714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluating the combined impact of amphotericin B and posaconazole on the germination of a rare Rhizopus homothallicus isolate responsible for COVID-19 associated mucormycosis 评价两性霉素B和泊沙康唑对一株引起新冠病毒相关毛霉病的罕见同源根霉分离株萌发的联合影响。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-01-01 Epub Date: 2025-12-18 DOI: 10.1016/j.riam.2025.10.003
Aishwarya Nikhil , Atul Kumar Tiwari , Suchita Gautam , Ragini Tilak , Mohit Bhatia , Munesh Kumar Gupta , Roger J. Narayan

Background

During the COVID-19 pandemic, Rhizopus arrhizus and Rhizopus homothallicus were identified as causative agents of rhino-cerebral mucormycosis in COVID-19 patients. Clinical management typically includes surgical debridement and antifungal treatment, with amphotericin B (AMB) and posaconazole (PCZ) as primary options. However, long-term use of AMB can lead to toxicity, necessitating PCZ as a follow-up treatment.

Aims

This study aimed to examine the combined effect of AMB and PCZ on R. homothallicus.

Methods

The combined effect of AmB and PCZ on R. homothallicus was studied by examining their minimum inhibitory concentration (MIC) values, fractional inhibitory concentration index (FICI), spore germination properties, viability, and intracellular reactive oxygen species accumulation; Raman spectroscopy was also performed.

Results

The MIC values for AmB and PCZ were 4 and 8 μg/mL, respectively, with a combined MIC of 2 μg/mL and an FICI index of <0.28. The germination rates at MIC values after 48 h of exposure were 28% for AmB, 36% for PCZ, and only 3% for the combination. Viability assays revealed dead sporangiospores following combination treatment. AmB and its combination generated more ROS (68.18% and 64.45%, respectively) than did PCZ alone (42.6%).

Conclusions

Combination therapy reduced the AMB dose without loss of efficacy, suggesting a synergistic effect against R. homothallicus. These results may support this alternative strategy to mitigate the side effects of AMB.
背景:在2019冠状病毒病大流行期间,阿根根霉和同源根霉被鉴定为COVID-19患者鼻-脑毛霉菌病的病原体。临床治疗通常包括手术清创和抗真菌治疗,两性霉素B (AMB)和泊沙康唑(PCZ)是主要选择。然而,长期使用AMB可导致毒性,需要PCZ作为后续治疗。目的:本研究旨在研究安百灵和PCZ对同质家鼠的联合作用。方法:通过测定AmB和PCZ的最低抑菌浓度(MIC)、分数抑菌浓度指数(FICI)、孢子萌发特性、活力、胞内活性氧积累等指标,研究其联合抑菌效果;并进行了拉曼光谱分析。结果:AmB和PCZ的MIC值分别为4和8µg/mL,联合MIC值为2µg/mL, FICI指数为。结论:联合治疗降低了AmB的剂量,但不丧失药效,提示对同家蝇有协同作用。这些结果可能支持这种减轻AMB副作用的替代策略。
{"title":"Evaluating the combined impact of amphotericin B and posaconazole on the germination of a rare Rhizopus homothallicus isolate responsible for COVID-19 associated mucormycosis","authors":"Aishwarya Nikhil ,&nbsp;Atul Kumar Tiwari ,&nbsp;Suchita Gautam ,&nbsp;Ragini Tilak ,&nbsp;Mohit Bhatia ,&nbsp;Munesh Kumar Gupta ,&nbsp;Roger J. Narayan","doi":"10.1016/j.riam.2025.10.003","DOIUrl":"10.1016/j.riam.2025.10.003","url":null,"abstract":"<div><h3>Background</h3><div>During the COVID-19 pandemic, <em>Rhizopus arrhizus</em> and <em>Rhizopus homothallicus</em> were identified as causative agents of rhino-cerebral mucormycosis in COVID-19 patients. Clinical management typically includes surgical debridement and antifungal treatment, with amphotericin B (AMB) and posaconazole (PCZ) as primary options. However, long-term use of AMB can lead to toxicity, necessitating PCZ as a follow-up treatment.</div></div><div><h3>Aims</h3><div>This study aimed to examine the combined effect of AMB and PCZ on <em>R. homothallicus</em>.</div></div><div><h3>Methods</h3><div>The combined effect of AmB and PCZ on <em>R. homothallicus</em> was studied by examining their minimum inhibitory concentration (MIC) values, fractional inhibitory concentration index (FICI), spore germination properties, viability, and intracellular reactive oxygen species accumulation; Raman spectroscopy was also performed.</div></div><div><h3>Results</h3><div>The MIC values for AmB and PCZ were 4 and 8<!--> <!-->μg/mL, respectively, with a combined MIC of 2<!--> <!-->μg/mL and an FICI index of &lt;0.28. The germination rates at MIC values after 48<!--> <!-->h of exposure were 28% for AmB, 36% for PCZ, and only 3% for the combination. Viability assays revealed dead sporangiospores following combination treatment. AmB and its combination generated more ROS (68.18% and 64.45%, respectively) than did PCZ alone (42.6%).</div></div><div><h3>Conclusions</h3><div>Combination therapy reduced the AMB dose without loss of efficacy, suggesting a synergistic effect against <em>R. homothallicus</em>. These results may support this alternative strategy to mitigate the side effects of AMB.</div></div>","PeriodicalId":21291,"journal":{"name":"Revista Iberoamericana De Micologia","volume":"43 1","pages":"Pages 7-16"},"PeriodicalIF":1.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145800765","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of risk factors and prognosis of fluconazole-resistant Candida tropicalis bloodstream infection 耐氟康唑热带念珠菌血流感染的危险因素及预后分析。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2026-01-01 Epub Date: 2026-01-29 DOI: 10.1016/j.riam.2025.11.001
Fei Wang , Yake Yao , Qing Yang , XueMei Lin , Yihua Zheng , Hua Zhou , Qin Huang

Background

In China, the isolation rate of fluconazole-resistant isolates of Candida tropicalis, together with fatality in cases of bloodstream infections due to this yeast, have increased annually.

Aims

This study investigates the clinical characteristics, risk factors, and prognostic factors of fluconazole-resistant C. tropicalis bloodstream infections (BSI).

Methods

A retrospective study analyzed clinical data of patients with C. tropicalis BSI from July 2013 to June 2019, focusing on clinical characteristics, risk factors, treatment regimens, and prognosis. Univariate analysis of risk factors and prognosis was conducted using χ2 test or Fisher's exact tests. Binary logistic regression model for risk factors, and Cox regression method for prognosis, were used for multivariate analysis.

Results

The study enrolled 100 patients with C. tropicalis BSI, including 44 fluconazole-resistant and 56 fluconazole-sensitive cases; 64 patients were cured and 36 died, resulting in a mortality rate of 36%. Logistic regression analysis identified exposure to azole antifungal agents during the 2 weeks prior to the onset of the BSI as a risk factor for fluconazole resistance. Cox regression analysis showed that hematological malignancy, fluconazole-resistant strains, indwelling catheters, and chronic obstructive pulmonary disease were independent risk factors for patient mortality. Conversely, targeted therapy with sensitive antifungal agents and removal of drainage tubes were protective factors for survival.

Conclusions

Azole exposure led to the development of fluconazole resistance in C. tropicalis BSI; hematologic malignancies, azole resistance, chronic obstructive pulmonary disease and having intravenous catheters increased mortality rate. The use of echinocandins or amphotericin B and catheter removal improved outcomes, underscoring the need for early resistance detection and targeted treatment.
背景:在中国,热带假丝酵母耐氟康唑分离株的分离率以及由该酵母菌引起的血液感染的病死率每年都在增加。目的:探讨耐氟康唑热带假体血液感染(BSI)的临床特点、危险因素及预后因素。方法:回顾性分析2013年7月至2019年6月热带梭状芽孢杆菌BSI患者的临床资料,重点分析临床特征、危险因素、治疗方案和预后。采用x2检验或Fisher精确检验对危险因素与预后进行单因素分析。危险因素采用二元logistic回归模型,预后采用Cox回归方法进行多因素分析。结果:本研究纳入100例热带假体BSI患者,其中氟康唑耐药44例,氟康唑敏感56例;治愈64例,死亡36例,死亡率36%。Logistic回归分析确定,BSI发病前2周内暴露于唑类抗真菌药物是氟康唑耐药的危险因素。Cox回归分析显示,血液恶性肿瘤、氟康唑耐药菌株、留置导管和慢性阻塞性肺疾病是患者死亡的独立危险因素。相反,使用敏感抗真菌药物和去除引流管的靶向治疗是生存的保护因素。结论:唑暴露导致热带恙螨对氟康唑产生耐药性;血液恶性肿瘤、抗唑、慢性阻塞性肺疾病和静脉留置导管增加了死亡率。棘白菌素或两性霉素B的使用和导管拔除改善了结果,强调了早期耐药检测和靶向治疗的必要性。
{"title":"Analysis of risk factors and prognosis of fluconazole-resistant Candida tropicalis bloodstream infection","authors":"Fei Wang ,&nbsp;Yake Yao ,&nbsp;Qing Yang ,&nbsp;XueMei Lin ,&nbsp;Yihua Zheng ,&nbsp;Hua Zhou ,&nbsp;Qin Huang","doi":"10.1016/j.riam.2025.11.001","DOIUrl":"10.1016/j.riam.2025.11.001","url":null,"abstract":"<div><h3>Background</h3><div>In China, the isolation rate of fluconazole-resistant isolates of <em>Candida tropicalis</em>, together with fatality in cases of bloodstream infections due to this yeast, have increased annually.</div></div><div><h3>Aims</h3><div>This study investigates the clinical characteristics, risk factors, and prognostic factors of fluconazole-resistant <em>C. tropicalis</em> bloodstream infections (BSI).</div></div><div><h3>Methods</h3><div>A retrospective study analyzed clinical data of patients with <em>C. tropicalis</em> BSI from July 2013 to June 2019, focusing on clinical characteristics, risk factors, treatment regimens, and prognosis. Univariate analysis of risk factors and prognosis was conducted using <em>χ</em><sup>2</sup> test or Fisher's exact tests. Binary logistic regression model for risk factors, and Cox regression method for prognosis, were used for multivariate analysis.</div></div><div><h3>Results</h3><div>The study enrolled 100 patients with <em>C. tropicalis</em> BSI, including 44 fluconazole-resistant and 56 fluconazole-sensitive cases; 64 patients were cured and 36 died, resulting in a mortality rate of 36%. Logistic regression analysis identified exposure to azole antifungal agents during the 2 weeks prior to the onset of the BSI as a risk factor for fluconazole resistance. Cox regression analysis showed that hematological malignancy, fluconazole-resistant strains, indwelling catheters, and chronic obstructive pulmonary disease were independent risk factors for patient mortality. Conversely, targeted therapy with sensitive antifungal agents and removal of drainage tubes were protective factors for survival.</div></div><div><h3>Conclusions</h3><div>Azole exposure led to the development of fluconazole resistance in <em>C. tropicalis</em> BSI; hematologic malignancies, azole resistance, chronic obstructive pulmonary disease and having intravenous catheters increased mortality rate. The use of echinocandins or amphotericin B and catheter removal improved outcomes, underscoring the need for early resistance detection and targeted treatment.</div></div>","PeriodicalId":21291,"journal":{"name":"Revista Iberoamericana De Micologia","volume":"43 1","pages":"Pages 17-22"},"PeriodicalIF":1.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146093907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Systemic endemic mycoses: From a geographical risk to a concern expansion 系统性地方性真菌病:从地理风险到关注范围的扩大。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2025-07-01 Epub Date: 2025-09-18 DOI: 10.1016/j.riam.2025.07.001
Gustavo Giusiano
Blastomycosis, coccidioidomycosis, histoplasmosis, paracoccidioidomycosis, emergomycosis, and talaromycosis are sapronoses restricted to specific geographical areas associated with particular environmental niches that can lead to high morbidity and mortality if diagnosed or treated late. Challenges in clinical awareness arise from their nonspecific clinical presentations and the limited availability of sensitive diagnostic tools. Although advances in molecular diagnosis and antigen detection-based tests are promising, they are not available for all systemic endemic mycoses (SEM). Treatment guidelines emphasize the importance of early antifungal treatment, although only a few limited therapeutic options have remained available over the years. Most SEM are not notifiable diseases, resulting in underreporting and a poor understanding of their true burden. The inclusion of several SEM-causing dimorphic fungi in the WHO Fungal Priority Pathogens List highlights their growing public health impact, the lack of prevention methods, and unmet research needs. Recognizing SEM as neglected diseases, improving surveillance, expanding diagnostic access, and developing affordable vaccines and therapeutics are essential steps toward addressing this evolving global health challenge. Coordinated international efforts are urgently needed.
芽孢菌病、球孢子菌病、组织浆菌病、副球孢子菌病、新兴菌病和talaromyosis是局限于特定地理区域与特定环境生态位相关的腐臭病,如果诊断或治疗较晚,可导致高发病率和死亡率。临床意识的挑战来自于他们的非特异性临床表现和敏感诊断工具的有限可用性。尽管分子诊断和基于抗原检测的检测方法取得了进展,但它们并不能用于所有系统性地方性真菌病(SEM)。治疗指南强调早期抗真菌治疗的重要性,尽管多年来只有少数有限的治疗选择仍然可用。大多数SEM不是必须报告的疾病,导致少报和对其真正负担的了解不足。世卫组织将几种引起sem的二态真菌列入真菌重点病原体清单,凸显了它们日益增长的公共卫生影响、缺乏预防方法以及未满足的研究需求。认识到SEM是被忽视的疾病,改善监测,扩大诊断途径,开发负担得起的疫苗和治疗方法是应对这一不断演变的全球健康挑战的必要步骤。迫切需要协调一致的国际努力。
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引用次数: 0
Isolation of Naganishia diffluens (formerly Cryptococcus diffluens) from skin lesions of a patient with leukemia 从白血病患者皮肤病变中分离出长岛散流菌(原散流隐球菌)。
IF 1.6 4区 生物学 Q4 MYCOLOGY Pub Date : 2025-07-01 Epub Date: 2025-11-19 DOI: 10.1016/j.riam.2025.10.001
Silvana Ramadán , Lucia Bulacio , Hernán Dalmaso , Adriana Rocaspana , Alicia Quarta , Rita David , Cecilia Capitelli , Paula Funes , María Mercedes Romero , Constanza Taverna , Susana Córdoba , Maximiliano Sortino

Background

Fungal diseases caused by species of the genus Cryptococcus are a growing public health problem, with the species belonging to the Cryptococcus neoformans and Cryptococcus gattii complexes being the most common and studied. In recent years, other species belonging to related genera have emerged, including Naganishia diffluens. As there are few reports on this species, it is important to emphasize its significance, particularly given that it has been found in skin lesions in immunocompromised patients, as in the case presented here. This highlights the importance of paying due attention to this species and recognizing its clinical relevance.

Case report

A 27-year-old male patient with a diagnosis of acute promyelocytic leukemia M3 (APL M3) experienced a febrile episode with skin lesions compatible with fungal infection, coinciding with marked neutropenia and the start of chemotherapy. Mycological analysis of skin lesions allowed the isolation of a fungus that was identified as N. diffluens.

Conclusions

The increase in the frequency of N. diffluens infections can be attributed to the rising number of patients with risk factors. The use of new microbial identification tools, such as molecular biology, which made it possible to accurately identify the causative agent, is highlighted.
背景:隐球菌属真菌引起的疾病是一个日益严重的公共卫生问题,其中属于新型隐球菌和加蒂隐球菌复合体的物种是最常见和研究最多的。近年来,其他属于相关属的物种也出现了,包括Naganishia diffluens。由于关于该物种的报道很少,强调它的重要性是很重要的,特别是考虑到它已经在免疫功能低下患者的皮肤病变中被发现,就像这里介绍的病例一样。这突出了对该物种给予应有关注并认识到其临床相关性的重要性。病例报告:27岁男性患者诊断为急性早幼粒细胞白血病M3 (APL M3),出现发热发作,皮肤病变与真菌感染相符,同时伴有明显的中性粒细胞减少和化疗开始。对皮肤损伤进行真菌学分析,分离出一种真菌,鉴定为扩散奈索菌。结论:扩散奈瑟菌感染频率的增加可归因于具有危险因素的患者数量的增加。强调使用新的微生物鉴定工具,如分子生物学,使准确鉴定病原体成为可能。
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引用次数: 0
期刊
Revista Iberoamericana De Micologia
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