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Survey of horse transportation in Switzerland: practices and issues. 瑞士马匹运输的调查:实践和问题。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-09-01 DOI: 10.17236/sat00402
B. Benedetti, M. Felici, G. Thiébaud, F. Freccero, B. Padalino
INTRODUCTIONThis study aimed to describe equine transportation practices and transport-related behavioural and health problems in Switzerland and to identify possible associations between them. An online survey was disseminated to Swiss equine industry members and questioned respondents' details, transport practices (before, during, and after journeys), horse transport-related behavioural (TRPBs) and health problems (TRHPs) experienced in the previous 2 years. The survey generated 441 valid responses, analysed using descriptive statistics and logistic regression models (outcomes: TRPBs, TRHPs, injuries, diarrhea). Respondents were mainly women (79,5 %), younger than 50 years (75 %), and amateurs (80 %). Most of the respondents transported one or two horses (88,7 %), for a short (< 2 hours) journey (75,5 %). Pre-transport practices were performed by 72,1 % of respondents and horses' fitness for travel was assessed in the majority of cases (66,5 %). During the journey, horses were tethered (92,6 %) and monitored (52,7 %). The majority of respondents (74,9 %) assessed also the horses' fitness after travel. TRPBs were reported by 13,4 % of respondents. TRPBs' likelihood increased when the respondents were women, performed pre-transport practices and training for transport, did not assess drinking behaviour and general health before journey, and the horses experienced also TRHPs. TRHPs were reported by 34 % of the respondents and were associated with younger respondents, use of trucks, doing pre-transport practices, wearing protections, not monitoring horses during transport and preexisting TRPBs. Among TRHPs the most frequent were injuries (72,1 %) and diarrhea (41 %). The likelihood of injuries increased with younger respondents, use of trucks, wearing protections, lack of monitoring during transport and TRPBs. While younger respondents, longer journeys, wearing protections, lack of monitoring during transport, measuring rectal temperature after journeys and TRPBs increased the odds of reporting diarrhea. Even though our findings must be interpreted with caution due to survey limitations, considering that the found associations do not always mean causation, they highlight the strengths and weaknesses of transport practices in Switzerland and report evidence to implement current regulations on the protection of horse welfare during transport.
本研究旨在描述瑞士的马运输实践和与运输相关的行为和健康问题,并确定它们之间可能存在的关联。一项在线调查向瑞士马业成员分发,并询问了受访者的详细信息、交通习惯(旅行前、旅行中和旅行后)、过去两年中与马交通相关的行为(TRPBs)和健康问题(TRHPs)。该调查产生了441份有效回复,使用描述性统计和逻辑回归模型(结果:TRPBs、TRHPs、伤害、腹泻)进行了分析。受访者主要是女性(79.5%)、50岁以下(75%)和业余爱好者(80%)。大多数受访者(88.7%)在短时间(< 2小时)的旅途中(75.5%)骑了一匹或两匹马。72.1%的受访者进行了运输前的实践,并且在大多数情况下评估了马匹的旅行适应性(66.5%)。在旅途中,拴马(92,6%)并对马进行监测(52,7%)。大多数受访者(74.9%)还评估了马在旅行后的健康状况。13.4%的受访者报告了TRPBs。当应答者为女性,进行运输前的实践和运输培训,在旅行前没有评估饮酒行为和一般健康状况,并且马匹也经历过trhp时,trhp的可能性增加。34%的应答者报告了trhp,并且与年轻应答者、使用卡车、进行运输前操作、穿戴防护、在运输过程中未监测马匹以及先前存在的trhp有关。在TRHPs中,最常见的是损伤(72.1%)和腹泻(41%)。年轻的受访者、使用卡车、穿戴防护、在运输过程中缺乏监测和TRPBs时,受伤的可能性增加。而较年轻的应答者,较长的旅行,佩戴保护措施,运输过程中缺乏监测,旅行后测量直肠温度和trpb增加了报告腹泻的几率。尽管由于调查的局限性,我们的研究结果必须谨慎解释,考虑到所发现的关联并不总是意味着因果关系,它们突出了瑞士运输实践的优势和劣势,并报告了实施运输过程中保护马匹福利的现行法规的证据。
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引用次数: 0
Large granular lymphocyte lymphoma with leukemic phase and suspicion of leptomeningeal lymphomatosis in a cat - a case report. 大颗粒淋巴细胞淋巴瘤伴白血病期和猫脑膜淋巴瘤病疑似病例报告。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-09-01 DOI: 10.17236/sat00404
N Mauri, F Graf, S Dressel-Böhm, G Scharf

Introduction: In this case report we present a feline large granular lymphocyte (LGL) lymphoma, a rare morphologically distinct subtype of lymphoma, in a twelve-year-old female spayed domestic short hair cat, with high suspicion of leptomeningeal lymphomatosis due to magnetic resonance imaging findings and results of cerebral spinal fluid analyses. Diagnosis of LGL lymphoma was confirmed by means of blood cytology and polymerase chain reaction for antigen receptor rearrangements.

导言:在本病例报告中,我们介绍了一只 12 岁的雌性绝育短毛猫患上的猫大颗粒淋巴细胞(LGL)淋巴瘤,这是一种罕见的形态独特的淋巴瘤亚型,由于磁共振成像结果和脑脊液分析结果,该猫被高度怀疑患有脑垂体淋巴瘤病。通过血液细胞学和聚合酶链反应检测抗原受体重排,确诊为 LGL 淋巴瘤。
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引用次数: 0
Large granular lymphocyte lymphoma with leukemic phase and suspicion of leptomeningeal lymphomatosis in a cat - a case report. 猫大颗粒淋巴细胞淋巴瘤伴白血病期并怀疑为小脑膜淋巴瘤1例报告。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-09-01 DOI: 10.17236/sat00404
N. Mauri, F. Gráf, S. Dressel-Böhm, G. Scharf
INTRODUCTIONIn this case report we present a feline large granular lymphocyte (LGL) lymphoma, a rare morphologically distinct subtype of lymphoma, in a twelve-year-old female spayed domestic short hair cat, with high suspicion of leptomeningeal lymphomatosis due to magnetic resonance imaging findings and results of cerebral spinal fluid analyses. Diagnosis of LGL lymphoma was confirmed by means of blood cytology and polymerase chain reaction for antigen receptor rearrangements.
在这个病例报告中,我们报告了一个猫大颗粒淋巴细胞淋巴瘤(LGL),这是一种罕见的形态学上独特的淋巴瘤亚型,发生在一只12岁的雌性家养短毛猫身上,由于磁共振成像和脑脊液分析的结果,高度怀疑是小脑膜淋巴瘤病。通过血细胞学检查和抗原受体重排的聚合酶链反应证实了LGL淋巴瘤的诊断。
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引用次数: 0
[Comparison of the reoperation rates of three techniques for tibial tuberosity transposition in medial patellar dislocation]. 三种技术治疗髌骨内侧脱位胫骨结节转位再手术率的比较。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-09-01 DOI: doi.org/10.17236/sat00403
C Vögele, D A Koch, P Kircher

Introduction: A common technique for the treatment of medial patellar luxation is the lateral transposition of the tibial tuberosity. Two variations of a new surgical method with a retention plate and fixation with a wire or a security plate, were tested against each other and against the existing fixation with Kirschner wires and a tension band by the number of reoperations. The new method using a retention plate and security plate showed the lowest rate of reoperations (5 %), followed by the new technique using retention plate and wire (14 %) and the existing fixation with Kirschner wires and a tension band (34 %). A possible explanation for the good result of the new method can be the fixation of the implants on the medial side of the tibia and the non-use of Kirschner wires.

简介:治疗内侧髌骨脱位的常用技术是胫骨结节外侧转位。通过重复手术的次数,对两种新的手术方法进行了测试,其中一种是固定板,另一种是用金属丝或安全板固定,并与现有的克氏针和张力带固定进行了测试。使用固定钢板和安全钢板的新方法的再手术率最低(5%),其次是使用固定钢板和金属丝的新方法(14%)和使用克氏针和张力带固定的新方法(34%)。新方法效果良好的一个可能解释是将植入物固定在胫骨内侧,而不使用克氏针。
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引用次数: 0
Effects of sensor ear tags with twin pin fixing system on health and well-being of cattle. 双钉固定耳标对牛健康和福利的影响。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-07-01 DOI: 10.17236/sat00399
N Gobbo Oliveira Erünlü, S Rieder, T Kuntzer, J Bérard, O Wellnitz

Introduction: A sensor ear tag (SET) containing Global Positioning System (GPS), accelerometer, Radio-Frequency Identification (RFID), and Bluetooth technologies was tested for wearing comfort and compliance with animal welfare requirements in cattle in a free stall barn and on summer pasture in Switzerland. The SET was equipped with a long-lasting battery via solar panel and used a «twin pin» fixing system. Right ears of 12 newborns and 26 adolescent animals were tagged with the SET. While left ears were tagged simultaneously with official ear tags in newborns, the adolescent animals already carried the official ear tags. The newborns stayed in a free stall barn during the entire experiment, while adolescent animals were housed in a free stall barn and on pasture during summer. All animals developed crusts beginning on day 7 after tagging with the SET. Pain reactions were observed occasionally in the first two weeks. Ear growth in newborns during 11 months of observation did not differ between ears with SET and official ear tags. Cortisol concentration in saliva of newborns decreased in the first week after tagging which is physiological for this age group. In older animals cortisol concentrations in saliva were not affected. We registered 19 incidences in 11 animals with the SET, that required veterinary or staff intervention. Two animals lost the SET with ear injury. Scars due to tag migration were observed in ears of all newborns after the 9th month of observation. In conclusion, SET with a weight of 32 g that need a twin pin fixation in cows do not seem to induce systemic or local inflammations more frequently compared to official ear tags; however, the higher risk of accidental injuries and migration in ear cartilage would not meet Swiss welfare standards and the attachment to the ear needs to be improved for general use.

简介:一种包含全球定位系统(GPS)、加速度计、射频识别(RFID)和蓝牙技术的传感器耳标(SET)在瑞士的一个自由马厩和夏季牧场的牛身上进行了佩戴舒适性和符合动物福利要求的测试。SET通过太阳能电池板配备了持久电池,并使用了“双针”固定系统。对12只新生动物和26只青春期动物的右耳进行了SET标记。当新生儿的左耳同时被贴上官方耳标时,青春期的动物已经携带了官方耳标。在整个实验过程中,新生儿待在自由畜栏里,而青春期的动物在夏天被关在自由畜栏里和牧场上。所有动物在使用SET标记后的第7天开始出现结痂。头两周偶见疼痛反应。在11个月的观察中,新生儿的耳朵生长在带有SET耳标和正式耳标的耳朵之间没有差异。新生儿唾液中的皮质醇浓度在标记后的第一周下降,这是该年龄组的生理特征。在老年动物中,唾液中的皮质醇浓度不受影响。我们在11只患有SET的动物中记录了19起事件,需要兽医或工作人员的干预。两只动物因耳朵受伤而失去了SET。观察9个月后,所有新生儿耳部均观察到标签移动造成的疤痕。总之,与官方耳标相比,需要双针固定的32 g重量的SET在奶牛中似乎不会更频繁地引起全身或局部炎症;然而,意外伤害和耳软骨移位的风险较高,不符合瑞士的福利标准,耳部的附着需要改进才能普遍使用。
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引用次数: 0
[Methods of analgesia and euthanasia in backyard poultry]. 后院家禽的镇痛和安乐死方法。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-07-01 DOI: 10.17236/sat00398
J-M Hatt, K Kreyenbühl, M Kummrow

Introduction: The keeping of chickens in the backyard is growing in popularity in urban and suburban areas, numbers of animals are increasing and as a result small animal practitioners are more and more frequently faced with chickens as patient. Clinical conditions in backyard poultry often require the treatment of pain. The challenges regarding the adequate use of analgesics include: 1. Recognition and assessment of pain, which necessitates good knowledge of chicken behaviour, 2. Selection of the adequate drug and dosage based on evidence that is often not available for chickens, but spread over different species of birds, and 3. Implementation of food safety regulations, which result from the dual use of backyard poultry as «food producing pets». Analgesics used in chickens include opiates, nonsteroidal anti-inflammatory drugs and local analgesics. The opiate butorphanol has been shown to have an analgesic effect of approximately two hours in chickens. Tramadol and methadone show some promise as analgesics, but more evidence is needed especially regarding bioavailability. The nonsteroidal anti-inflammatory drugs meloxicam and carprofen appear to have an analgesic effect. Variable metabolism between breeds of chickens and the risk of accumulation, especially when used for periods exceeding five consecutive days, need to be taken into account regarding dosage. Lidocaine and bupivacaine have successfully been used in chickens for nerve blocks and spinal anaesthesia and should be included as part of multimodal analgesia especially during surgery. In cases, where termination of life is necessary the preferred method consists of an injectable anaesthesia followed by intravenous application of a barbiturate.

导论:在城市和郊区,后院养鸡越来越受欢迎,动物的数量越来越多,因此小动物从业者越来越频繁地面对鸡的病人。临床条件的后院家禽往往需要治疗疼痛。关于充分使用镇痛药的挑战包括:1。识别和评估疼痛,这需要对鸡的行为有很好的了解;2 .根据证据选择适当的药物和剂量,这些证据通常不适用于鸡,但适用于不同种类的鸟类;实施食品安全法规,这是由于后院家禽作为“食品生产宠物”的双重用途造成的。用于鸡的镇痛药包括阿片类药物、非甾体抗炎药和局部镇痛药。阿片类药物丁托啡诺已被证明对鸡有大约两小时的镇痛作用。曲马多和美沙酮作为镇痛药有一定的前景,但还需要更多的证据,特别是在生物利用度方面。非甾体类抗炎药美洛昔康和卡洛芬似乎有镇痛作用。在剂量方面,需要考虑到不同品种鸡的代谢变化和积累风险,特别是连续使用超过5天的情况。利多卡因和布比卡因已成功用于鸡的神经阻滞和脊髓麻醉,应作为多模式镇痛的一部分,特别是在手术期间。在必须终止生命的情况下,首选的方法包括注射麻醉,然后静脉应用巴比妥酸盐。
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引用次数: 0
Mastitis in a flock of milking sheep. 一群产奶的绵羊患乳腺炎。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-07-01 DOI: 10.17236/sat00400
P Makovicky, J Poracova, M Konecna, M Margetin, M Nagy

Introduction: Determination of somatic cell counts (SCC) becomes more and more important also for ewe's milk. SCC can be a useful indicator of milk quality for milk processors while it can be a mastitis indicator for sheep keepers and an important selection criterion for breeders. The objective of our study was to acquire basic information about factors influencing SCC variability in lambing ewes of the Tsigai (T) and Improved Valachian (IV) breeds. Somatic cell counts (SCC) were determined in 866 milk samples in 2017 and 2018, during lamb sucking and during milking period. An instrument Fossomatic 90 (Foss Electric, Hillerød, Denmark) was used for analysis. Average SCC varied from 270 to 1897 × 103 cells/ml during lamb sucking and from 268 to 2139 × 103 cells/ml during milking period. Differences between the sampling periods were statistically significant in 2017. An increase in SCC was observed at the end of both sucking and milking periods. An overall evaluation of lactation brought about the average SCC at 364 × 103 cells/ml in 2017 (log(10) SCC - 2,25) and at 1,091 × 103 cells/ml in 2018 (log(10) SCC - 2,68). The indicator log(10) was significantly influenced by breed in 2017 (T - 2,61; IV - 2,75). The effect of lactation number and number of sucking lambs did not have any significant influence on SCC.

母羊乳中体细胞计数的测定也变得越来越重要。SCC对牛奶加工者来说是一个有用的牛奶质量指标,对羊饲养者来说是一个乳腺炎指标,对育种者来说是一个重要的选择标准。本研究的目的是了解影响Tsigai (T)和改良Valachian (IV)母羊SCC变异的基本因素。在2017年和2018年,在羔羊吸吮和挤奶期间,对866份牛奶样本进行了体细胞计数(SCC)检测。采用Fossomatic 90 (Foss Electric, Hillerød, Denmark)仪器进行分析。羔羊吸吮期间平均SCC为270 ~ 1897 × 103细胞/ml,挤奶期间为268 ~ 2139 × 103细胞/ml。2017年采样周期之间的差异具有统计学意义。在吸吮期和挤奶期结束时,观察到SCC的增加。对泌乳的总体评估显示,2017年平均SCC为364 × 103细胞/ml (log(10) SCC - 2,25), 2018年为1,091 × 103细胞/ml (log(10) SCC - 2,68)。2017年指标对数(10)受品种影响显著(T - 2,61;Iv - 2,75)。泌乳次数和吸羔数对SCC无显著影响。
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引用次数: 0
[Risk factors for infectious foot -disorders on two Swiss cattle -mountain pastures]. [两种瑞士山地牧场牛传染性足病的风险因素]。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-06-01 DOI: 10.17236/sat00397
M Schaub, M Alsaaod, C Syring, J Becker, J Plüss, S Blatter, F Rachidi, A Starke, A Steiner

Introduction: In the present study, risk groups for infectious foot disorders were identified on two large Swiss cattle mountain pastures by analyzing animal and treatment data of a total of 3256 animals of the bovine species. Both mountain pastures were part of the Federal Office for Agriculture (FOAG) consultancy project «Healthy animals, attractive herdsmen positions and less medication on large cattle mountain pastures». The project was launched in 2020 following the increased incidence of lameness on these mountain pastures. Bacteriological and histological analyses were to provide information as to whether the most common foot disorder was interdigital phlegmon (IP) or whether digital dermatitis also occurred. Further, the temporal distribution of cases over the mountain pasture season and the influence of mountain pasture and year were investigated and interpreted for the project years 2020 to 2022, and treatment incidences were compared between years. Multiple treatment cycles in the same individual were classified into persistent infections and new infections. Nineteen of 394 first-treated cattle were clinically examined, 12 of them were additionally sampled for bacteriological and histological analyses. All cases examined showed, both clinically and following laboratory analyses, typical characteristics for IP. In contrast, there was no specific evidence for the presence of digital dermatitis. No persistent infections occurred during treatment with benzylpenicillin. Multivariate logistic regression analyses identified > 365-730-day-old cattle (odds ratio OR 8,29), as well as inseminated (OR 5,30) and non-inseminated (OR 7,85) heifers as risk groups for the disease studied (p < 0,05). Association with the oestrus activity of non-inseminated heifers and a generally higher locomotor activity in heifers compared to cows - with a correspondingly increased risk of injury - is conceivable. Meat breeds had a reduced risk compared to dairy breeds (OR 0,29). Breed differences in behavior and/or the effectiveness of the local immune response might have an impact. Knowing about these risk groups can be put to use in the future when selecting animals to be taken to the mountain pastures and/or when planning pasture management in order to reduce the prevalence of infectious foot disorders and thereby the use of antibiotics.

导言:在本研究中,通过分析总共 3256 头牛的动物和治疗数据,确定了瑞士两座大型山地牧场的传染性足病风险群体。这两个高山牧场都是联邦农业局(FOAG)咨询项目 "大型高山牧场上健康的牲畜、有吸引力的牧民位置和更少的药物 "的一部分。该项目于 2020 年启动,因为这些山区牧场的跛足发病率有所上升。细菌学和组织学分析旨在提供信息,说明最常见的蹄部疾病是趾间痰肿(IP),还是也会发生数字皮炎。此外,还调查并解释了 2020 年至 2022 年项目期间病例在山地牧场季节的时间分布以及山地牧场和年份的影响,并比较了不同年份的治疗发生率。同一个体的多个治疗周期被分为持续感染和新感染。对 394 头首次接受治疗的牛中的 19 头进行了临床检查,并对其中 12 头进行了细菌学和组织学分析。从临床和实验室分析结果来看,所有病例都显示出 IP 的典型特征。相比之下,没有具体证据表明存在数字皮炎。在使用苄青霉素治疗期间,没有出现持续感染。多变量逻辑回归分析发现,365-730 日龄以上的牛(几率比OR 8.29)以及人工授精(OR 5.30)和非人工授精(OR 7.85)的小母牛是本病的风险群体(P < 0.05)。可以想象,这与未受精母牛的发情活动有关,而且与母牛相比,母牛的运动能力普遍较强,因此受伤的风险也相应增加。与奶牛品种相比,肉牛品种的风险较低(OR 0.29)。品种在行为和/或当地免疫反应有效性方面的差异可能会产生影响。了解了这些风险群体的情况后,今后在选择要带去山区牧场的牲畜和/或规划牧场管理时就能派上用场,从而降低传染性蹄病的发病率,减少抗生素的使用。
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引用次数: 0
Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. 来自屠宰小牛和育肥猪的第三代耐头孢菌素大肠杆菌的特征:瑞士一项通过全基因组测序监测抗菌素耐药性的试点研究。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-06-01 DOI: 10.17236/sat00396
C. B. Aebi, J. E. Fernandez, S. Kittl, M. L. Tresch, V. Perreten, G. Overesch
INTRODUCTIONWhole genome sequencing (WGS) was introduced into Swiss antimicrobial resistance monitoring in 2022 as an additional method to phenotypic antimicrobial susceptibility testing by broth microdilution to characterize presumptive third-generation cephalosporin-resistant (3GC-R) Escherichia coli. Caecal samples from Swiss slaughter calves and fattening pigs, as well as beef and pork meat from Swiss retail taken in 2021, were analyzed for the presence of 3GC-R E. coli according to European harmonized protocols. In 2021, 3GC-R E. coli was detected in 23,8 % of slaughter calves, 5,9 % of fattening pigs, and 0 % of meat. Comparative analysis of the antimicrobial resistance results obtained by phenotypic measurement and those obtained by the detection of corresponding underlying molecular mechanisms by WGS showed very high agreement (99 %). Resistance to third-generation cephalosporins (3GCs) was mainly associated with the presence of blaCTX-M-15 in E. coli isolates from calves and blaCTX-M-1 in E. coli isolates from pigs and mutations in the ampC-promoter (g.-42 C>T) in E. coli isolates from both animal species. Moreover, WGS data were used for phylogenetic analysis based on multi locus sequence types (MLST) and core genome MLST(cgMLST) revealing that 3GC-R E. coli isolated from Swiss slaughter calves and fattening pigs were genetically diverse. In this study, it was shown that using WGS alone to monitor antimicrobial resistance could detect trends in known molecular antimicrobial resistance mechanisms while also providing other valuable information about the isolates, such as genetic relatedness. However, only by combining phenotypic susceptibility testing and WGS early detection of previously unknown resistance mechanisms will be possible.
全基因组测序(WGS)于2022年被引入瑞士的抗菌素耐药性监测中,作为通过肉汤微量稀释进行表型抗菌素敏感性试验的额外方法,以表征假定的第三代头孢菌素耐药(3GC-R)大肠杆菌。根据欧洲统一协议,对瑞士屠宰小牛和育肥猪的盲肠样本以及2021年瑞士零售的牛肉和猪肉进行了3GC-R大肠杆菌的分析。2021年,在23.8%的屠宰小牛、5.9%的育肥猪和0%的肉类中检测到3GC-R大肠杆菌。表型测定所得的耐药结果与WGS检测相应潜在分子机制所得的耐药结果对比分析显示一致性非常高(99%)。对第三代头孢菌素(3gc)的耐药主要与犊牛大肠杆菌分离株中blaCTX-M-15和猪大肠杆菌分离株中blaCTX-M-1的存在以及两种动物分离株中ampc -启动子(g.-42 C>T)的突变有关。此外,利用WGS数据进行多位点序列类型(MLST)和核心基因组MLST(cgMLST)的系统发育分析表明,从瑞士屠宰犊牛和育肥猪分离的3GC-R大肠杆菌具有遗传多样性。本研究表明,单独使用WGS监测抗菌素耐药性可以检测已知分子抗菌素耐药机制的趋势,同时还可以提供其他有价值的信息,如遗传亲缘关系。然而,只有将表型敏感性试验与WGS相结合,才能早期发现以前未知的耐药机制。
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引用次数: 0
Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. 屠宰小牛和育肥猪中对第三代头孢菌素耐药的大肠埃希菌的特征:瑞士通过全基因组测序监测抗菌药耐药性的试点研究。
IF 0.7 4区 农林科学 Q3 VETERINARY SCIENCES Pub Date : 2023-06-01 DOI: 10.17236/sat00396
C B Aebi, J E Fernandez, S Kittl, M L Tresch, V Perreten, G Overesch

Introduction: Whole genome sequencing (WGS) was introduced into Swiss antimicrobial resistance monitoring in 2022 as an additional method to phenotypic antimicrobial susceptibility testing by broth microdilution to characterize presumptive third-generation cephalosporin-resistant (3GC-R) Escherichia coli. Caecal samples from Swiss slaughter calves and fattening pigs, as well as beef and pork meat from Swiss retail taken in 2021, were analyzed for the presence of 3GC-R E. coli according to European harmonized protocols. In 2021, 3GC-R E. coli was detected in 23,8 % of slaughter calves, 5,9 % of fattening pigs, and 0 % of meat. Comparative analysis of the antimicrobial resistance results obtained by phenotypic measurement and those obtained by the detection of corresponding underlying molecular mechanisms by WGS showed very high agreement (99 %). Resistance to third-generation cephalosporins (3GCs) was mainly associated with the presence of blaCTX-M-15 in E. coli isolates from calves and blaCTX-M-1 in E. coli isolates from pigs and mutations in the ampC-promoter (g.-42 C>T) in E. coli isolates from both animal species. Moreover, WGS data were used for phylogenetic analysis based on multi locus sequence types (MLST) and core genome MLST(cgMLST) revealing that 3GC-R E. coli isolated from Swiss slaughter calves and fattening pigs were genetically diverse. In this study, it was shown that using WGS alone to monitor antimicrobial resistance could detect trends in known molecular antimicrobial resistance mechanisms while also providing other valuable information about the isolates, such as genetic relatedness. However, only by combining phenotypic susceptibility testing and WGS early detection of previously unknown resistance mechanisms will be possible.

导言:全基因组测序(WGS)于 2022 年被引入瑞士抗菌药耐药性监测,作为肉汤微量稀释法表型抗菌药敏感性检测的补充方法,用于鉴定推定的第三代头孢菌素耐药(3GC-R)大肠埃希菌。根据欧洲统一规程,对 2021 年瑞士屠宰的小牛和育肥猪的粪便样本以及瑞士零售的牛肉和猪肉样本进行了分析,以确定是否存在 3GC-R 大肠杆菌。2021 年,23.8% 的屠宰小牛、5.9% 的育肥猪和 0% 的肉类中检测到了 3GC-R 大肠杆菌。通过表型测量获得的抗菌药耐药性结果与通过 WGS 检测相应的潜在分子机制获得的结果进行比较分析,结果显示两者的一致性非常高(99%)。对第三代头孢菌素(3GCs)的耐药性主要与小牛大肠杆菌分离物中的 blaCTX-M-15 和猪大肠杆菌分离物中的 blaCTX-M-1 以及这两种动物的大肠杆菌分离物中的 ampC 启动子(g.-42 C>T)突变有关。此外,基于多位点序列类型(MLST)和核心基因组 MLST(cgMLST),利用 WGS 数据进行了系统发育分析,结果显示从瑞士屠宰小牛和育肥猪分离的 3GC-R 大肠杆菌具有遗传多样性。该研究表明,单独使用 WGS 监测抗菌药耐药性可检测出已知分子抗菌药耐药性机制的趋势,同时还能提供分离菌株的其他有价值信息,如遗传亲缘关系。不过,只有将表型药敏试验和 WGS 结合起来,才能及早发现以前未知的耐药性机制。
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Schweizer Archiv fur Tierheilkunde
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