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Whole-grain black rice diet rewires the single-cell transcriptomic landscape of age-related ovarian decline in mice. 全谷物黑米饮食重塑了小鼠年龄相关卵巢衰退的单细胞转录组景观。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-02-01 Epub Date: 2026-01-05 DOI: 10.1007/s11427-025-3046-4
Yi-Xuan Tu, Dan-Yang Wang, Jun Ma, Ke-Chun Yu, Sheng-Hui Li, Bo-Han Li, Xin-Yin Deng, Shan Li, Hong-Kai Wang, Tailang Yin, Ling Wang, Zhen-Xia Chen

Ovarian aging poses significant challenges to female fertility and overall health. While whole-grain black rice diet (BRD) has emerged as a promising anti-aging intervention, its translational potential for ovarian health remains underexplored. This study systematically evaluated BRD's effects on ovarian functional decline through single-cell profiling and phenotypic validation. We demonstrated that BRD intervention effectively delays ovarian aging by preserving the ovarian reserve and maintaining hormonal balance, with granulosa cells (GCs) exhibiting the most pronounced responsiveness. Notably, BRD counteracts age-associated reductions in the GCs population and restores ovarian functional capacity. These findings highlight BRD's ability to rejuvenate the ovarian cellular landscape and stabilize aging-related tran-scriptional profiles. Our study provides actionable insights for developing BRD-based nutritional strategies to combat female reproductive aging, paving the way for clinically translatable dietary interventions and functional food innovations targeting the extension of women's healthspan.

卵巢老化对女性生育能力和整体健康构成重大挑战。虽然全麦黑米饮食(BRD)已成为一种有希望的抗衰老干预措施,但其对卵巢健康的转化潜力仍未得到充分探索。本研究通过单细胞分析和表型验证系统地评估了BRD对卵巢功能衰退的影响。我们证明BRD干预通过保留卵巢储备和维持激素平衡有效地延缓卵巢衰老,其中颗粒细胞(GCs)表现出最明显的反应性。值得注意的是,BRD可以抵消与年龄相关的GCs减少,并恢复卵巢功能。这些发现强调了BRD恢复卵巢细胞景观和稳定衰老相关转录谱的能力。我们的研究为制定基于brd的营养策略以对抗女性生殖衰老提供了可行的见解,为临床可转化的饮食干预和旨在延长女性健康寿命的功能性食品创新铺平了道路。
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引用次数: 0
Cathelicidin LL-37-ApoB-100 interaction promotes LDL clearance and attenuates cholesterol accumulation in the liver. Cathelicidin LL-37-ApoB-100相互作用促进LDL清除并减轻肝脏中的胆固醇积累。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-02-01 Epub Date: 2025-09-17 DOI: 10.1007/s11427-025-3006-2
Yaqun Fang, Zhiye Zhang, Qiqi Cao, Gan Wang, Zilei Duan, Ping Meng, Shengwen Zhou, Shuohan Fei, Dawit Adisu Tadese, James Mwangi, Qiumin Lu, Heyu Ni, Ren Lai

Dysregulation of low-density lipoprotein (LDL) cholesterol is strongly correlated with the risk of metabolic dysfunction-associated steatotic liver disease. Endogenous molecules targeting LDL clearance play crucial roles in the progression of liver steatosis. Human cathelicidin LL-37 can form complexes with lipoproteins, but whether these complexes regulate lipoprotein-driven cholesterol metabolism is not clear. Here, we find that cathelicidin LL-37 binds to LDL via apolipoprotein (Apo)B-100 domains, enhancing the solubility of ApoB-100 and inhibiting the modifications and aggregation of LDL. LL-37-LDL interaction promotes LDL uptake through LDL receptor (LDLR) both in hepatocytes and macrophages. This interaction also promotes LDL cholesterol clearance by facilitating cholesterol excretion and cholesterol efflux. In Apoe-/- mice with hypercholesterolemia, the murine homolog cathelicidin Cramp similarly accelerates cholesterol clearance by activating cholesterol excretion and preventing hepatic lipid accumulation. This study identifies LL-37 as an endogenous regulator of LDL that promotes LDL cholesterol clearance.

低密度脂蛋白(LDL)胆固醇的失调与代谢功能障碍相关的脂肪变性肝病的风险密切相关。内源性分子靶向LDL清除在肝脏脂肪变性的进展中起关键作用。人cathelicidin LL-37可与脂蛋白形成复合物,但这些复合物是否调节脂蛋白驱动的胆固醇代谢尚不清楚。在这里,我们发现cathelicidin LL-37通过载脂蛋白(Apo)B-100结构域与LDL结合,增强ApoB-100的溶解性,抑制LDL的修饰和聚集。在肝细胞和巨噬细胞中,LL-37-LDL相互作用通过LDL受体(LDLR)促进LDL摄取。这种相互作用还通过促进胆固醇排泄和胆固醇外排来促进LDL胆固醇的清除。在患有高胆固醇血症的Apoe-/-小鼠中,小鼠同源物cathelicidin痉挛同样通过激活胆固醇排泄和防止肝脏脂质积累来加速胆固醇清除。本研究确定LL-37是一种内源性LDL调节因子,可促进LDL胆固醇清除。
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引用次数: 0
Ubiquitination of susceptibility factor drives broad-spectrum resistance. 敏感性因子泛素化驱动广谱耐药。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-02-01 Epub Date: 2025-09-23 DOI: 10.1007/s11427-025-3040-7
Lu Bai, Jiayin Xu, Yuchen Xu, Jiangbo Fan
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引用次数: 0
Chromatin accessibility dynamics and transcriptional regulation in Tetrahymena thermophila. 嗜热四膜虫染色质可及性动力学和转录调控。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-30 DOI: 10.1007/s11427-025-3085-2
Tengfei Hu, Zhengyu Luo, Xiaoyuan Song

Chromatin accessibility is a key determinant of transcriptional regulation across eukaryotes, yet its organization and functional significance in ciliated protists remain poorly defined. Here, we optimized ATAC-seq to delineate the chromatin landscape in the transcriptionally active macronucleus of Tetrahymena thermophila. Our analyses reveal that accessible chromatin is predominantly enriched upstream of transcription start sites (TSSs), in stark contrast to the promoter-proximal accessibility observed in human embryonic stem cells. Dynamic profiling across different life cycle stages of T. thermophila (vegetative growth, starvation, conjugation, and refeeding) uncovers coordinated shifts in chromatin architecture that closely mirror extensive transcriptional reprogramming. Moreover, transcriptional inhibition by flavopiridol reduces chromatin openness upstream of TSSs while enhancing nucleosome organization downstream of TSSs, underscoring the direct impact of transcription on shaping chromatin structure. Comparative analyses across 13 eukaryotic species further indicate that upstream-biased accessibility is an ancestral trait in unicellular eukaryotes, whereas higher vertebrates have evolved more complex promoter architectures. These findings not only establish T. thermophila as a powerful model for dissecting chromatin-dependent gene regulation but also provide novel insights into the evolutionary divergence of chromatin organization across the eukaryotic lineage.

染色质可及性是真核生物转录调控的关键决定因素,但其在纤毛原生生物中的组织和功能意义尚不明确。在这里,我们优化了ATAC-seq来描绘嗜热四膜虫转录活性大核中的染色质景观。我们的分析显示,可接近的染色质主要富集于转录起始位点(tss)上游,这与在人类胚胎干细胞中观察到的启动子-近端可接近性形成鲜明对比。通过对嗜热t细胞不同生命周期阶段(营养生长、饥饿、结合和再摄食)的动态分析,揭示了染色质结构的协调变化,这些变化密切反映了广泛的转录重编程。此外,黄酮吡醇的转录抑制降低了TSSs上游的染色质开放度,同时增强了TSSs下游的核小体组织,强调了转录对染色质结构形成的直接影响。对13种真核生物的比较分析进一步表明,上游亲和性是单细胞真核生物的祖先特征,而高等脊椎动物进化出了更复杂的启动子结构。这些发现不仅建立t thermophila解剖chromatin-dependent基因调控是一个强大的模型还提供了新颖的见解在真核血统进化趋异染色质的组织。
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引用次数: 0
SWI/SNF regulated HBV cccDNA transcription as a new target potential to functional cure. SWI/SNF调节HBV cccDNA转录作为功能治愈的新靶点。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-30 DOI: 10.1007/s11427-025-3236-9
Kuanhui Xiang, Hui Zhuang
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引用次数: 0
Vesicles for cell crosstalk in bone: composition, function and application. 骨细胞串扰的囊泡:组成、功能和应用。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-30 DOI: 10.1007/s11427-025-3068-y
Chenhui Gu, Yiyu Chen, Pengyu Chen, Hongsen Tian, Junchen Jiang, Zijie Wang, Huige Yan, Xianfeng Lin

Vesicles, with closed membrane structures containing nucleic acids, proteins, lipids, and metabolites, play a vital role in cell crosstalk. And bone, the important center of cellular information exchange, is where abundant vesicle-based cellular crosstalk occurs. This review explores the composition, functions, and clinical applications of vesicles derived from bone-related cells. Extracellular vesicles, including exosomes, microvesicles, apoptotic bodies, and newly identified structures such as migrasomes, exhibit heterogeneity in size, origin, biogenesis, and components. These vesicles facilitate complex cellular interactions, influencing bone formation, resorption, and immune responses. Extracellular vesicles hold significant promise as diagnostic biomarkers and therapeutic tools in bone-related diseases. Despite advancements, challenges remain in addressing vesicle heterogeneity, standardizing isolation techniques, and translating vesicle-based therapies into clinical practice. We summarize the latest advances in vesicle research related to bone, aiming to draw the attention of the academic community to newly identified vesicle structures, and may provide insights for studying vesicle-based interactions in other systemic organs.

囊泡具有封闭的膜结构,含有核酸、蛋白质、脂质和代谢物,在细胞串扰中起着至关重要的作用。骨是细胞信息交换的重要中心,是大量基于囊泡的细胞串扰发生的地方。本文就骨相关细胞囊泡的组成、功能及临床应用作一综述。细胞外囊泡,包括外泌体、微囊泡、凋亡小体和新发现的迁移小体等结构,在大小、起源、生物发生和成分上表现出异质性。这些囊泡促进复杂的细胞相互作用,影响骨形成、骨吸收和免疫反应。细胞外囊泡作为骨相关疾病的诊断生物标志物和治疗工具具有重要的前景。尽管取得了进展,但在解决囊泡异质性、标准化分离技术以及将基于囊泡的治疗方法转化为临床实践方面仍然存在挑战。我们总结了与骨相关的囊泡研究的最新进展,旨在引起学术界对新发现的囊泡结构的关注,并可能为研究其他系统器官中基于囊泡的相互作用提供见解。
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引用次数: 0
Dehydroepiandrosterone activates ADGRG2 to regulate chloride homeostasis and sperm motility via Gs-cAMP pathways. 脱氢表雄酮激活ADGRG2通过Gs-cAMP途径调节氯离子稳态和精子运动。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-28 DOI: 10.1007/s11427-025-3122-7
Dan Jiang, Ji-Fei Han, Xian-Zheng Guo, Yu-Qi Ping, Fan Yang, Peng Xiao, Jin-Peng Sun, Xiao Yu, Zhao Yang, Hui Lin

Dehydroepiandrosterone (DHEA), a steroid hormone critical to reproductive health, is widely used to improve outcomes in assisted reproductive technologies, though its molecular targets and mechanisms remain incompletely defined. In our previous studies, we identified DHEA as a ligand for the male reproductive-related receptor ADGRG2 and elucidated the recognition mechanism between DHEA and ADGRG2 using Cryo-EM structure of ADGRG2 in complex with DHEA and Gs. However, it remains unclear whether DHEA acts as a physiological ligand for ADGRG2 to regulate its functions. Using ADGRG2-deficient mice and in vitro reconstitution assays, we demonstrated that DHEA activated the Gs signaling pathways of ADGRG2 in efferent ductal cells, which facilitated synergistic coupling with cystic fibrosis transmembrane conduction regulator (CFTR) to regulate chlorine homeostasis. Strikingly, ADGRG2 is selectively expressed in X chromosome-bearing (X) sperm, where DHEA enhances motility via a Gs-cAMP signaling axis. This functional bias enables efficient enrichment of X sperm through DHEA-induced motility enhancement, achieving 80.5% XX embryos in in vitro fertilization (IVF). These findings reveal ADGRG2-dependent mechanisms underlying male reproductive physiology and position DHEA-ADGRG2 axis as a promising therapeutic target for precision management of infertility and sex-controlled reproductive technologies.

脱氢表雄酮(DHEA)是一种对生殖健康至关重要的类固醇激素,被广泛用于改善辅助生殖技术的结果,尽管其分子靶点和机制尚未完全确定。在我们之前的研究中,我们发现DHEA是男性生殖相关受体ADGRG2的配体,并利用ADGRG2与DHEA和Gs复合物的Cryo-EM结构阐明了DHEA与ADGRG2之间的识别机制。然而,DHEA是否作为ADGRG2的生理配体调节其功能尚不清楚。通过ADGRG2缺陷小鼠和体外重构实验,我们发现DHEA激活了传出导管细胞中ADGRG2的Gs信号通路,促进了与囊性纤维化跨膜传导调节剂(CFTR)的协同偶联,以调节氯稳态。引人注目的是,ADGRG2在携带X染色体(X)的精子中选择性表达,其中DHEA通过Gs-cAMP信号轴增强运动性。这种功能偏差通过dhea诱导的运动能力增强使X精子有效富集,在体外受精(IVF)中获得80.5%的XX胚胎。这些发现揭示了adgrg2依赖于男性生殖生理的机制,并将DHEA-ADGRG2轴定位为不孕症精确管理和性别控制生殖技术的有希望的治疗靶点。
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引用次数: 0
USP7 protects histone H1.2 from proteasome-mediated degradation to facilitate DNA repair and pancreatic neuroendocrine neoplasms progression. USP7保护组蛋白H1.2免受蛋白酶体介导的降解,促进DNA修复和胰腺神经内分泌肿瘤的进展。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-28 DOI: 10.1007/s11427-025-3052-4
Mujie Ye, Lin Xu, Ping Yu, Jialing Pan, Xiaoting Shi, Bingyan Xue, Na He, Ping Hu, Min Liu, Xintong Lu, Yuemei Xu, Yanling Xu, Qiyun Tang

Ubiquitin-specific protease 7 (USP7), a deubiquitinase, is involved in tumor progression. However, its roles in pancreatic neuroendocrine neoplasms (pNENs) remain unclear. The main objective of this study was therefore to investigate the molecular mechanism of how USP7 promoted pNEN progression. Proteomics and ubiquitin-omics were used to identify the substrates for USP7. We investigated the roles of USP7 and histone H1.2 in DNA repair in pNEN cells using comet assays and γ-H2AX immunofluorescence. The synergistic effects of cisplatin and the USP7 inhibitor, P005091, were evaluated using CCK-8, colony formation, and EdU assays. Western blot analysis was conducted to characterize the PI3K/AKT/mTOR signaling pathway. In vivo, the efficacy of the combination therapy was tested in xenograft models. The results showed a significant increase in USP7 levels in the tissues and cells of pNENs. Furthermore, USP7 was found to promote the proliferation, migration, and invasion of pNENs both in vitro and in vivo. Mechanistically, USP7 facilitated DNA repair through its interaction with histone H1.2 and the activation of the PI3K/AKT/mTOR pathway. The combination of cisplatin and P005091, a USP7 inhibitor, synergistically inhibited tumor growth and DNA repair in both in vitro and in vivo models, without exhibiting significant toxicity. In conclusion, USP7 was a key regulator of DNA repair in pNENs. The combination of cisplatin and P005091 therefore holds promise as a therapeutic strategy for pNENs.

泛素特异性蛋白酶7 (USP7)是一种去泛素酶,参与肿瘤的进展。然而,其在胰腺神经内分泌肿瘤(pNENs)中的作用尚不清楚。因此,本研究的主要目的是探讨USP7促进pNEN进展的分子机制。利用蛋白质组学和泛素组学鉴定USP7的底物。我们利用彗星法和γ-H2AX免疫荧光法研究了USP7和组蛋白H1.2在pNEN细胞DNA修复中的作用。顺铂与USP7抑制剂P005091的协同效应通过CCK-8、菌落形成和EdU测定进行评估。Western blot分析PI3K/AKT/mTOR信号通路。在体内,在异种移植模型中测试了联合治疗的疗效。结果显示pNENs的组织和细胞中USP7水平显著升高。此外,在体外和体内均发现USP7可促进pNENs的增殖、迁移和侵袭。在机制上,USP7通过与组蛋白H1.2的相互作用和PI3K/AKT/mTOR通路的激活促进DNA修复。在体外和体内模型中,顺铂与USP7抑制剂P005091联合使用可协同抑制肿瘤生长和DNA修复,且无明显毒性。综上所述,USP7是pNENs中DNA修复的关键调控因子。因此,顺铂和P005091的联合治疗有望成为pNENs的治疗策略。
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引用次数: 0
AI-decoded enzymatic blueprints navigate the unknown metabolome. 人工智能解码的酶蓝图导航未知的代谢组。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-28 DOI: 10.1007/s11427-025-3168-5
Shu-Xin Cao, Xiang Luo, Yu Bai, Hong-Li Tan, Rong-Rong He
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引用次数: 0
Dynamic lung single-cell atlas of domesticated and wild pigs. 家猪和野猪肺动态单细胞图谱。
IF 9.5 2区 生物学 Q1 BIOLOGY Pub Date : 2026-01-28 DOI: 10.1007/s11427-025-3150-6
Fei Huang, Yanyuan Xiao
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引用次数: 0
期刊
Science China Life Sciences
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