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Timing of biomarker changes preceding Alzheimer's disease: for diagnosis, treatment or prevention? 阿尔茨海默病前生物标志物变化的时间选择:用于诊断、治疗还是预防?
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-12 DOI: 10.1007/s11427-024-2733-7
Meina Quan
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引用次数: 0
Genome-wide CRISPR screens identify CLC-2 as a drug target for anti-herpesvirus therapy: tackling herpesvirus drug resistance. 全基因组 CRISPR 筛选发现 CLC-2 是抗疱疹病毒治疗的药物靶点:解决疱疹病毒耐药性问题。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-12 DOI: 10.1007/s11427-023-2627-8
Fayu Yang, Nan Wei, Shuo Cai, Jing Liu, Qingping Lan, Hao Zhang, Lu Shang, Bo Zheng, Mi Wang, Yingchun Liu, Lifang Zhang, Chenzhong Fei, Wu Tong, Changlong Liu, Ersheng Kuang, Guangzhi Tong, Feng Gu

The emergence of drug resistance to virus (i.e., acyclovir (ACV) to herpesviruses) has been termed one of the common clinical issues, emphasizing the discovery of new antiviral agents. To address it, a genome-wide clustered regularly interspaced short palindromic repeats (CRISPR) screening was performed in mouse haploid embryonic stem cells infected with pseudorabies virus (PRV), an α-herpesvirus causing human and pig diseases. The results demonstrated that type 2 voltage-gated chloride channels (CLC-2) encoded by one of the identified genes, CLCN2, is a potential drug target for anti-herpesvirus therapy. CLC-2 inhibitors, omeprazole (OME) and 4,4'-diisothiocyanostilbene-2,2'-disulfonic acid (DIDS), can efficiently inhibit infection of multiple herpesviruses in cellulo (i.e., PRV, HSV and EBV), and effectively treat murine herpes simplex encephalitis (HSE). Additionally, DIDS was found to inhibit HSV-1 replication by blocking the PI3K/Akt pathway. Most importantly, both DIDS and OME were able to inhibit ACV-resistant HSV-1 strain infection. The study's findings suggest that targeting host-cell factors such as CLC-2 may be a promising approach to tackling herpesvirus drug resistance. The discovery of CLC-2 as a potential drug target for anti-herpesvirus therapy provides a new direction for the development of novel antiviral agents.

病毒耐药性(如阿昔洛韦(ACV)对疱疹病毒的耐药性)的出现被称为常见的临床问题之一,强调了新抗病毒药物的发现。针对这一问题,研究人员在感染了伪狂犬病毒(PRV)(一种导致人类和猪疾病的α-疱疹病毒)的小鼠单倍体胚胎干细胞中进行了全基因组聚类规律性间隔短回文重复序列(CRISPR)筛选。研究结果表明,由已鉴定基因之一 CLCN2 编码的 2 型电压门控氯离子通道(CLC-2)是抗疱疹病毒治疗的潜在药物靶点。CLC-2抑制剂奥美拉唑(OME)和4,4'-二异硫氰基芪-2,2'-二磺酸(DIDS)能有效抑制多种疱疹病毒(即PRV、HSV和EBV)的细胞感染,并能有效治疗小鼠单纯疱疹性脑炎(HSE)。此外,研究还发现 DIDS 可通过阻断 PI3K/Akt 通路抑制 HSV-1 的复制。最重要的是,DIDS和OME都能抑制ACV耐药HSV-1株感染。研究结果表明,靶向宿主细胞因子(如CLC-2)可能是解决疱疹病毒耐药性问题的一种很有前景的方法。发现 CLC-2 作为抗疱疹病毒治疗的潜在药物靶点,为新型抗病毒药物的开发提供了新的方向。
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引用次数: 0
Advances in brain tumor therapy: from molecular diagnostics to novel treatments. 脑肿瘤治疗的进展:从分子诊断到新型治疗。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-11 DOI: 10.1007/s11427-024-2727-6
Junwen Zhang, Ran Mu, Fusheng Liu
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引用次数: 0
Compound heterozygous mutation of AFG3L2 causes autosomal recessive spinocerebellar ataxia through mitochondrial impairment and MICU1 mediated Ca2+ overload. AFG3L2 的复合杂合突变通过线粒体损伤和 MICU1 介导的 Ca2+ 超载导致常染色体隐性脊髓小脑共济失调。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-11 DOI: 10.1007/s11427-023-2549-2
Hongyu Li, Qingwen Ma, Yan Xue, Linlin Cai, Liwen Bao, Lei Hong, Yitao Zeng, Shu-Zhen Huang, Richard H Finnell, Fanyi Zeng

Autosomal recessive spinocerebellar ataxias (SCARs) are one of the most common neurodegenerative diseases characterized by progressive ataxia. Although SCARs are known to be caused by mutations in multiple genes, there are still many cases that go undiagnosed or are misdiagnosed. In this study, we presented a SCAR patient, and identified a probable novel pathogenic mutation (c.1A>G, p.M1V) in the AFG3L2 start codon. The proband's genotype included heterozygous mutations of the compound AFG3L2 (p.[M1V]; [R632X] (c.[1A>G]; [1894.C>T])), which were inherited from the father (c.1A>G, p.M1V) and mother (c.1894C>T, p.R632X). Functional studies performed on hiPSCs (human induced pluripotent stem cells) generated from the patients and HEK293T cells showed that the mutations impair mitochondrial function and the unbalanced expression of AFG3L2 mRNA and protein levels. Furthermore, this novel mutation resulted in the degradation of the protein and the reduction of the stability of the AFG3L2 protein, and MCU (mitochondrial calcium uniporter) complex mediated Ca2+ overload.

常染色体隐性脊髓小脑共济失调症(SCARs)是以进行性共济失调为特征的最常见的神经退行性疾病之一。尽管已知脊髓小脑共济失调症由多个基因突变引起,但仍有许多病例未被诊断或被误诊。在本研究中,我们发现了一名SCAR患者,并在AFG3L2起始密码子中发现了一个可能的新型致病突变(c.1A>G,p.M1V)。该患者的基因型包括复合 AFG3L2 的杂合突变(p.[M1V]; [R632X] (c.[1A>G]; [1894.C>T]),分别遗传自父亲(c.1A>G, p.M1V)和母亲(c.1894C>T, p.R632X)。对患者生成的 hiPSCs(人类诱导多能干细胞)和 HEK293T 细胞进行的功能研究表明,突变损害了线粒体功能,并导致 AFG3L2 mRNA 和蛋白质水平表达失衡。此外,这种新型突变导致蛋白降解、AFG3L2 蛋白稳定性降低,以及 MCU(线粒体钙离子通道)复合物介导的 Ca2+ 超载。
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引用次数: 0
RGS22 maintains the physiological function of ependymal cells to prevent hydrocephalus. RGS22 可维持脑外膜细胞的生理功能,防止脑积水。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-10 DOI: 10.1007/s11427-024-2720-8
Xue Pang, Lin Gu, Qiu-Ying Han, Jia-Qing Xing, Ming Zhao, Shao-Yi Huang, Jun-Xi Yi, Jie Pan, Hao Hong, Wen Xue, Xue-Qing Zhou, Zhi-Hui Su, Xin-Ran Zhang, Li-Ming Sun, Shao-Zhen Jiang, Dan Luo, Ling Chen, Zheng-Jie Wang, Yu Yu, Tian Xia, Xue-Min Zhang, Ai-Ling Li, Tao Zhou, Hong Cai, Tao Li

Ependymal cells line the wall of cerebral ventricles and ensure the unidirectional cerebrospinal fluid (CSF) flow by beating their motile cilia coordinately. The ependymal denudation or ciliary dysfunction causes hydrocephalus. Here, we report that the deficiency of regulator of G-protein signaling 22 (RGS22) results in severe congenital hydrocephalus in both mice and rats. Interestingly, RGS22 is specifically expressed in ependymal cells within the brain. Using conditional knock-out mice, we further demonstrate that the deletion of Rgs22 exclusively in nervous system is sufficient to induce hydrocephalus. Mechanistically, we show that Rgs22 deficiency leads to the ependymal denudation and impaired ciliogenesis. This phenomenon can be attributed to the excessive activation of lysophosphatidic acid receptor (LPAR) signaling under Rgs22-/- condition, as the LPAR blockade effectively alleviates hydrocephalus in Rgs22-/- rats. Therefore, our findings unveil a previously unrecognized role of RGS22 in the central nervous system, and present RGS22 as a potential diagnostic and therapeutic target for hydrocephalus.

上皮细胞排列在脑室壁上,通过协调地跳动其运动的纤毛来确保脑脊液(CSF)的单向流动。上皮细胞变性或纤毛功能障碍会导致脑积水。在这里,我们报告了 G 蛋白信号转导调节因子 22(RGS22)的缺乏会导致小鼠和大鼠出现严重的先天性脑积水。有趣的是,RGS22特异性地表达于脑内的上皮细胞。通过使用条件性基因敲除小鼠,我们进一步证明,只在神经系统中缺失 RGS22 就足以诱发脑积水。从机理上讲,我们发现 Rgs22 的缺失会导致上皮细胞变性和纤毛生成受损。这一现象可归因于 Rgs22-/- 条件下溶血磷脂酸受体(LPAR)信号的过度激活,因为阻断 LPAR 可有效缓解 Rgs22-/- 大鼠的脑积水。因此,我们的研究结果揭示了 RGS22 在中枢神经系统中的作用,并将 RGS22 作为脑积水的潜在诊断和治疗靶点。
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引用次数: 0
Individual and joint exposures to PM2.5 constituents and mortality risk among the oldest-old in China. 中国老年人个人和共同暴露于 PM2.5 成分与死亡风险。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-10 DOI: 10.1007/s11427-024-2718-9
Yaqi Wang, Yang Yuan, Shaocai Mo, Fang Wang, Jing Wei, Yao Yao, Yi Zeng, Yunquan Zhang

Cohort evidence linking long-term survival of older adults with exposure to fine particulate matter (PM2.5) constituents remains scarce in China. By constructing a dynamic cohort based on the Chinese Longitudinal Healthy Longevity Study, we aimed to assess the individual and joint associations of major PM2.5 constituents with all-cause death in Chinese oldest-old (.80 years) adults. Time-dependent Cox proportional hazards models were adopted to estimate death risks of long-term exposure to PM2.5 constituents. Among 14,884 participants, totaling 56,342 person-years of follow-up, 12,346 deaths were identified. The highest mortality risk associated with an interquartile range (IQR) increase in exposure was 1.081 (95% confidence interval [CI]: 1.055-1.108) for sulfate (IQR=4.1 μg m-3), followed by 1.078 (95% CI: 1.056-1.101) for black carbon (IQR=1.6 μg m-3), 1.056 (95% CI: 1.028-1.084) for ammonium (IQR=3.2 μg m-3), 1.050 (95% CI: 1.021-1.080) for nitrate (IQR=5.8 μg m-3), and 1.049 (95% CI: 1.024-1.074) for organic matter (IQR=10.3 μg m-3). In joint exposure, each IQRequivalent rise of all five PM2.5 constituents was associated with an 8.2% (95% CI: 4.0%-12.6%) increase in mortality risk. The weight analysis indicated the predominant role of sulfate and black carbon in driving PM2.5-related mortality. Octogenarians (aged 80-89 years) and rural dwellers were at significantly greater risk of mortality from individual and joint exposures to PM2.5 constituents. This study suggests that later-life exposure to PM2.5 constituents, particularly sulfate and black carbon, may curtail long-term survival of the oldest-old in China.

在中国,将老年人的长期生存与暴露于细颗粒物(PM2.5)成分相关联的队列证据仍然很少。通过在中国健康长寿纵向研究的基础上构建一个动态队列,我们旨在评估中国高龄(80 岁以下)成年人中 PM2.5 主要成分与全因死亡的个体和联合关联。我们采用了与时间相关的 Cox 比例危险模型来估算长期暴露于 PM2.5 成分的死亡风险。在 14,884 名参与者,共计 56,342 人年的随访中,共发现 12,346 例死亡。硫酸盐(IQR=4.1 μg m-3)与暴露量四分位数间距(IQR)增加相关的最高死亡风险为 1.081(95% 置信区间 [CI]:1.055-1.108),其次是黑碳(IQR=1.056-1.101)与暴露量四分位数间距(IQR)增加相关的 1.078(95% 置信区间 [CI]:1.056-1.101)。101),铵(IQR=3.2 μg m-3)为 1.056(95% CI:1.028-1.084),硝酸盐(IQR=5.8 μg m-3)为 1.050(95% CI:1.021-1.080),有机物(IQR=10.3 μg m-3)为 1.049(95% CI:1.024-1.074)。在联合暴露中,所有五种PM2.5成分的IQR每上升1%,死亡风险就增加8.2%(95% CI:4.0%-12.6%)。权重分析表明,硫酸盐和黑碳在导致与PM2.5相关的死亡率方面起着主导作用。八旬老人(80-89 岁)和农村居民因单独或共同暴露于 PM2.5 成分而死亡的风险明显更高。这项研究表明,晚年暴露于PM2.5成分,尤其是硫酸盐和黑碳,可能会降低中国高龄老人的长期存活率。
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引用次数: 0
Potential preservative mechanisms of cardiac rehabilitation pathways on endothelial function in coronary heart disease. 心脏康复途径对冠心病内皮功能的潜在保护机制。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-10 DOI: 10.1007/s11427-024-2656-6
Wen-Tao Sun, Jian-Yong Du, Jia Wang, Yi-Long Wang, Er-Dan Dong

Cardiac rehabilitation, a comprehensive exercise-based lifestyle and medical management, is effective in decreasing morbidity and improving life quality in patients with coronary heart disease. Endothelial function, an irreplaceable indicator in coronary heart disease progression, is measured by various methods in traditional cardiac rehabilitation pathways, including medicinal treatment, aerobic training, and smoking cessation. Nevertheless, studies on the effect of some emerging cardiac rehabilitation programs on endothelial function are limited. This article briefly reviewed the endothelium-beneficial effects of different cardiac rehabilitation pathways, including exercise training, lifestyle modification and psychological intervention in patients with coronary heart disease, and related experimental models, and summarized both uncovered and potential cellular and molecular mechanisms of the beneficial roles of various cardiac rehabilitation pathways on endothelial function. In exercise training and some lifestyle interventions, the enhanced bioavailability of nitric oxide, increased circulating endothelial progenitor cells (EPCs), and decreased oxidative stress are major contributors to preventing endothelial dysfunction in coronary heart disease. Moreover, the preservation of endothelial-dependent hyperpolarizing factors and inflammatory suppression play roles. On the one hand, to develop more endothelium-protective rehabilitation methods in coronary heart disease, adequately designed and sized randomized multicenter clinical trials should be advanced using standardized cardiac rehabilitation programs and existing assessment methods. On the other hand, additional studies using suitable experimental models are warranted to elucidate the relationship between some new interventions and endothelial protection in both macro- and microvasculature.

心脏康复是一种以运动为基础的综合生活方式和医疗管理,能有效降低冠心病患者的发病率并提高生活质量。内皮功能是冠心病进展过程中不可替代的指标,在传统的心脏康复途径中,包括药物治疗、有氧训练和戒烟在内的各种方法都能测量内皮功能。然而,一些新兴的心脏康复项目对内皮功能影响的研究还很有限。本文简要回顾了运动训练、生活方式调整、冠心病患者心理干预等不同心脏康复途径及相关实验模型对内皮有益的作用,并总结了各种心脏康复途径对内皮功能有益的已发现和潜在的细胞和分子机制。在运动训练和一些生活方式干预中,一氧化氮生物利用率的提高、循环内皮祖细胞(EPCs)的增加和氧化应激的减少是预防冠心病内皮功能障碍的主要因素。此外,内皮依赖性超极化因子的保护和炎症抑制也发挥了作用。一方面,为开发更多冠心病内皮保护康复方法,应利用标准化心脏康复项目和现有评估方法,推进设计充分、规模适当的随机多中心临床试验。另一方面,有必要使用合适的实验模型进行更多研究,以阐明一些新的干预措施与大血管和微血管内皮保护之间的关系。
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引用次数: 0
Current status and impact of the Young Scientist Foundation of the National Natural Science Foundation on Chinese young scholars in cardiovascular research. 国家自然科学基金委员会青年科学基金项目对中国青年学者心血管研究的影响和现状。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-23 DOI: 10.1007/s11427-024-2655-3
Fei Gao, Zhenzhen Chen, Wendong Li, Hujun Jiang, Rui Wang
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引用次数: 0
Reevaluation by the CRISPR/Cas9 knockout approach revealed that multiple pluripotency-associated lncRNAs are dispensable for pluripotency maintenance while Snora73a/b is essential for pluripotency exit. 通过CRISPR/Cas9基因敲除方法重新评估发现,多个与多能性相关的lncRNA对于多能性的维持是不可或缺的,而Snora73a/b对于多能性的退出是必不可少的。
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-09 DOI: 10.1007/s11427-023-2594-3
Zhen Li, Xuefei Li, Jingxia Lin, Yangming Wang, Huiqing Cao, Jiajian Zhou

Many long noncoding RNAs (lncRNAs) have been identified through siRNA-based screening as essential regulators of embryonic stem cell (ESC) pluripotency. However, the biological and molecular functions of most lncRNAs remain unclear. Here, we employed CRISPR/Cas9-mediated knockout technology to explore the functions of 8 lncRNAs previously reported to promote pluripotency in mouse ESCs. Unexpectedly, all of these lncRNAs were dispensable for pluripotency maintenance and proliferation in mouse ESCs when disrupted individually or in combination. Single-cell transcriptomic analysis also showed that the knockout of these lncRNAs has a minimal impact on pluripotency gene expression and cell identity. We further showed that several small hairpin RNAs (shRNAs) previously used to knock down lncRNAs caused the downregulation of pluripotency genes in the corresponding lncRNA-knockout ESCs, indicating that off-target effects likely responsible for the pluripotency defects caused by these shRNAs. Interestingly, linc1343-knockout and linc1343-knockdown ESCs failed to form cystic structures and exhibited high expression of pluripotency genes during embryoid body (EB) differentiation. By reintroducing RNA products generated from the linc1343 locus, we found that two snoRNAs, Snora73a and Snora73b, but not lncRNAs, could rescue pluripotency silencing defects during EB differentiation of linc1343 knockout ESCs. Our results suggest that the 8 previously annotated pluripotency-regulating lncRNAs have no overt functions in conventional ESC culture; however, we identified snoRNA products derived from an annotated lncRNA locus as essential regulators for silencing pluripotency genes.

通过基于 siRNA 的筛选,已发现许多长非编码 RNA(lncRNA)是胚胎干细胞(ESC)多能性的重要调节因子。然而,大多数lncRNA的生物学和分子功能仍不清楚。在这里,我们利用CRISPR/Cas9介导的基因敲除技术探讨了先前报道的促进小鼠ESC多能性的8种lncRNA的功能。出乎意料的是,当这些lncRNAs被单独或组合敲除时,它们对小鼠ESC的多能性维持和增殖都是不可或缺的。单细胞转录组分析还显示,敲除这些lncRNA对多能基因表达和细胞特性的影响微乎其微。我们进一步发现,以前用于敲除lncRNA的几种小发夹RNA(shRNA)会导致相应的lncRNA敲除ESC中多能基因的下调,这表明脱靶效应可能是这些shRNA导致多能性缺陷的原因。有趣的是,linc1343基因敲除和linc1343基因敲除的ESC未能形成囊状结构,并在胚状体(EB)分化过程中表现出多能基因的高表达。通过重新引入从linc1343位点产生的RNA产物,我们发现Snora73a和Snora73b这两种snoRNA,而不是lncRNA,可以挽救linc1343基因敲除的ESC在EB分化过程中的多能性沉默缺陷。我们的研究结果表明,先前注释的8个多能性调控lncRNA在传统的ESC培养中没有明显的功能;然而,我们发现了源自一个注释的lncRNA位点的snoRNA产物是沉默多能性基因的重要调控因子。
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引用次数: 0
Combined effects of climate and land-use changes on the alpha and beta functional diversities of terrestrial mammals in China. 气候和土地利用变化对中国陆生哺乳动物α和β功能多样性的综合影响
IF 8 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-17 DOI: 10.1007/s11427-023-2574-0
Chao Zhang, Yumei Li, Wei Wang, Zexuan Gao, Hanqing Liu, Yonggang Nie

Climate and land-use changes are predicted to impact biodiversity, threatening ecosystem services and functions. However, their combined effects on the functional diversity of mammals at the regional scale remain unclear, especially at the beta level. Here, we use projected climate and land-use changes in China to investigate their potential effects on the alpha and beta functional diversities of terrestrial mammals under low- and high-emission scenarios. In the current projection, we showed strong positive spatial correlations between functional richness and species richness. Functional evenness (FEve), functional specialization (FSpe), and functional originality (FOri) decreased with species richness, and functional divergence (FDiv) increased first and then plateaued. Functional beta diversity was dominated by its nestedness component, in contrast to the taxonomic facet. Potential changes in species richness are more strongly influenced by land-use change under the low-emission scenario, while under the high-emission scenario, they are more strongly influenced by climate change. Changes in functional richness (FRic) were inconsistent with those in species richness, with a magnitude of decreases greater than predicted from species richness. Moreover, mammal assemblages showed potential functional differentiation (FD) across the country, and the trends exceeded those towards taxonomic differentiation (TD). Our findings help us understand the processes underlying biodiversity responses to global changes on multiple facets and provide new insight for conservation plans.

据预测,气候和土地利用的变化将影响生物多样性,威胁生态系统的服务和功能。然而,它们在区域尺度上对哺乳动物功能多样性的综合影响仍不清楚,尤其是在β水平上。在此,我们利用预测的中国气候和土地利用变化,研究在低排放和高排放情景下,它们对陆生哺乳动物α和β功能多样性的潜在影响。在当前的预测中,我们发现功能丰富度与物种丰富度之间存在很强的空间正相关性。功能均匀性(FEve)、功能专一性(FSpe)和功能独创性(FOri)随着物种丰富度的增加而降低,功能分化(FDiv)先增加后趋于平稳。功能贝塔多样性由其嵌套性成分主导,这与分类学方面形成了鲜明对比。在低排放情景下,物种丰富度的潜在变化受土地利用变化的影响更大,而在高排放情景下,物种丰富度的潜在变化受气候变化的影响更大。功能丰富度(FRic)的变化与物种丰富度的变化不一致,其下降幅度大于物种丰富度的预测。此外,全国各地的哺乳动物群落显示出潜在的功能分化(FD),其趋势超过了分类分化(TD)的趋势。我们的研究结果有助于我们了解生物多样性对全球变化的多方面响应过程,并为保护计划提供新的见解。
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引用次数: 0
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