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Biochemical and physicochemical characteristics and volatile profiles of Erzincan Tulum cheese coagulated by herb-fortified artisanal lamb rennet 用草药强化手工羔羊凝乳酶凝固的 Erzincan Tulum 奶酪的生化和理化特征及挥发性特征
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-19 DOI: 10.1016/j.smallrumres.2024.107368
Ayla Arslaner , Özgenur Türkmen
The characteristics of Erzincan Tulum cheese (ETC), an artisanal ewe-milk cheese and the first cheese with the designation of origin in Türkiye, are closely related to the geographical location of production and the human factors influencing every stage of the production process. This study aims to determine the influence of different coagulants (namely, herb-fortified artisanal lamb rennet (ALR), artisanal calf rennet (ACR), and commercial calf rennet (CCR)) on the biochemical, physicochemical characteristics, and volatile compounds of ETC, produced on the Heybeli plateau of the Erzincan province. Using artisanal rennet increased total solids, fat content, and acidity while decreasing pH and aw values. The highest PTA-SN (soluble nitrogen in 5 % phosphotungstic acid, w/v) and TCA-SN (soluble nitrogen in 12 % trichloroacetic acid w/w) values at the end of the ripening period (day 150 of storage) were observed in the ALR-Cheese (ALR-C). Furthermore, this cheese exhibited the highest rate of lipolysis (P < 0.01). Electrophoretograms revealed that αs-1 and β-casein degradation rates were the most significant in ALR-C. Following the 30th day of storage, the highest counts of lactic acid bacteria (LAB) were found in ALR-C. The most rapid reduction of coliforms, E. coli, and yeast-mold was observed in this sample throughout the storage. Eighty-nine volatile compounds were identified in the samples. Particularly noteworthy, ALR-C exhibited the highest ratios of hexanoic, octanoic, and decanoic acids after 90 days of storage. Additionally, steroid compounds were exclusively detected in this sample. The findings of this research make a substantial contribution to the existing literature concerning rennet types and the aromatic profile of ETC. These aspects are crucial for further investigations to enhance the cheese's quality and safety.
埃尔津詹图卢姆奶酪(Erzincan Tulum cheese,ETC)是一种手工制作的母羊奶奶酪,也是图尔基耶第一种拥有原产地名称的奶酪,其特点与生产的地理位置和影响生产过程每个阶段的人为因素密切相关。本研究旨在确定不同凝固剂(即草药强化手工羔羊凝乳酶(ALR)、手工小牛凝乳酶(ACR)和商业小牛凝乳酶(CCR))对埃尔津詹省海贝利高原生产的 ETC 的生物化学、物理化学特征和挥发性化合物的影响。使用手工凝乳酶增加了总固形物、脂肪含量和酸度,同时降低了 pH 值和 aw 值。在成熟期结束时(储存的第 150 天),ALR-C 奶酪(ALR-C)的 PTA-SN(5% 磷钨酸中的可溶性氮,w/v)和 TCA-SN(12% 三氯乙酸中的可溶性氮,w/w)值最高。此外,这种奶酪的脂肪分解率最高(P < 0.01)。电泳图显示,αs-1 和 β-酪蛋白降解率在 ALR-C 中最为显著。贮藏第 30 天后,ALR-C 中的乳酸菌(LAB)数量最多。在整个贮藏过程中,该样品中大肠菌群、大肠杆菌和酵母霉菌的减少速度最快。样品中鉴定出 89 种挥发性化合物。尤其值得注意的是,ALR-C 在储存 90 天后显示出最高的己酸、辛酸和癸酸比率。此外,在该样本中还专门检测到了类固醇化合物。这项研究的结果对现有文献中有关凝乳酶类型和 ETC 芳香族特征的研究做出了重大贡献。这些方面对于进一步研究提高奶酪的质量和安全性至关重要。
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引用次数: 0
Anticipating the potential distribution of Fasciola spp. in Gilan province of Iran: Insights from MaxEnt and climate change scenarios 预测伊朗吉兰省法氏囊病菌的潜在分布:从 MaxEnt 和气候变化情景中获得的启示
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-18 DOI: 10.1016/j.smallrumres.2024.107370
Galia Modabbernia , Behnam Meshgi , Ahmad Ali Hanafi-Bojd
Fasciolosis, a parasitic disease affecting humans and animals, is uniquely influenced by climatic and environmental factors. Gilan province in northern Iran is recognized as a high-endemic area for this parasite. This study aims to assess the prevalence of fasciolosis in Gilan province during the current period and forecast the distribution pattern of the parasite in future periods by analyzing climatic variables and identifying the most critical factors impacting Fasciola. To evaluate the present status of fasciolosis in Gilan, we collected 189 sheep fecal samples from different parts of the province and quantified eggs per gram of feces in each sample. Meteorological and environmental data were obtained and clipped to the study area. A total of 19 presence points were used to model the habitat suitability of Fasciola spp. through the maximum entropy (MaxEnt) algorithm, with jackknife analysis to determine variable importance. To project the potential distribution of Fasciola spp. in Gilan province under future scenarios, we employed MaxEnt using current (1970–2000) and projected climatic data based on three representative concentration pathway scenarios (RCP 2.6, RCP 4.5, and RCP 8.5) to predict habitat suitability in 2030, 2050, and 2070.
The results of this study indicate the proportion of Fasciola spp. infection was highest in Talesh (46.37 %) and Langarud (45.7 %), while Rudsar (0 %) and Shaft (16.25 %) exhibited the lowest infection rates in Gilan province. MaxEnt modeling highlighted the significance of bioclimatic variables, particularly those associated with vegetation and temperature, such as temperature seasonality (Bio4) and normalized difference vegetation index (NDVI). The ecological niche modeling illustrated that the highest potential distribution for Fasciola in Gilan province is concentrated in the north-western and central regions, exhibiting an 80–100 % potential. However, projections for the future indicate a decrease to less than 20 % suitability for most of the province under all three scenarios until 2070. This study provides valuable insights into the dynamic relationship between climatic variables and Fasciola distribution, enabling better preparedness and control strategies for this trematode in Gilan province and other regions with similar climates.
法氏囊病是一种影响人类和动物的寄生虫病,受到气候和环境因素的独特影响。伊朗北部的吉兰省被认为是这种寄生虫的高端流行区。本研究旨在评估吉兰省当前的法氏囊病流行情况,并通过分析气候变量和确定影响法氏囊病的最关键因素,预测寄生虫在未来时期的分布模式。为了评估吉兰省法氏囊病的现状,我们从该省不同地区收集了 189 份绵羊粪便样本,并对每份样本中每克粪便的虫卵进行了量化。我们还获得了气象和环境数据,并将其剪切到研究区域。共使用了 19 个存在点,通过最大熵(MaxEnt)算法建立了法氏囊属动物栖息地适宜性模型,并使用杰克刀分析法确定变量的重要性。为了预测吉兰省在未来情况下的潜在法氏囊属分布,我们采用 MaxEnt 算法,使用当前(1970-2000 年)和基于三种代表性浓度路径情景(RCP 2.6、RCP 4.5 和 RCP 8.5)的预测气候数据来预测吉兰省的生境适宜性。研究结果表明,在吉兰省,Talesh(46.37%)和Langarud(45.7%)的法氏囊属感染率最高,而Rudsar(0%)和Shaft(16.25%)的感染率最低。MaxEnt 模型突出了生物气候变量的重要性,尤其是与植被和温度相关的变量,如温度季节性(Bio4)和归一化植被指数(NDVI)。生态位建模表明,吉兰省法氏囊虫的最高分布潜力集中在西北部和中部地区,潜力为 80%-100%。然而,对未来的预测表明,在所有三种情况下,直到 2070 年,该省大部分地区的适宜性都将下降到 20% 以下。这项研究为了解气候变量与法氏囊分布之间的动态关系提供了宝贵的见解,有助于吉兰省和其他气候相似的地区更好地防范和控制法氏囊虫。
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引用次数: 0
Genetic diversity and evolutionary significance of Cahi-DRB1 gene in Indian goat from semi-arid regions 半干旱地区印度山羊 Cahi-DRB1 基因的遗传多样性及其进化意义
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-08 DOI: 10.1016/j.smallrumres.2024.107365
S.P. Naik , P.V. Nandedkar , A. Gurao , P.K. Rout , M.K. Singh , S. Sajid. Ali , P.R. Suryawanshi , P.B. Ghorpade , M. Chitkara , R.S. Kataria , G.R. Gowane , M.S. Dige
Unlocking the genetic diversity of the Cahi-DRB1 gene in Indian goat breeds sheds light on their immune system's resilience. While extensive studies have elucidated MHC diversity in cattle and sheep, research on goats remains limited. Thus, this study aimed to investigate the genetic diversity of cahi-DRB1 across five goat breeds in India, encompassing a total of 233 individual goats. Using a PCR sequence-based typing approach, DRB1 fragments (285 bp) were amplified and sequenced. The PCR products were purified and sequenced. Amino acid variability within breeds was evaluated using the Wu-Kabat index at peptide-binding pockets. Selection analysis included assessing positive selection through relative rates of nonsynonymous and synonymous mutations, Z-test, and Tajima's test of neutrality. The findings revealed notable heterozygosity across breeds (mean: 100 %), with nucleotide content averaging 22.51 % for A, 18.62 % for T, 24.33 % for C, and 34.35 % for G. The GC content was rich (59.26 %) across breeds for the DRB1 region. The mean distance for DRB1 was highest in Barbari (0.20) and lowest in Osmanabadi goat (0.12), with a higher rate of transversions observed. The Wu-Kabat index assessments underscored substantial genetic variation within the peptide binding sites (PBS) of DRB1, with specific residues (12, 14, 33, 58, and 87) showing polymorphism relevant to antigen presentation. Positive selection pressure was evident across all breeds for the DRB1 locus (dN>dS), highlighting its evolutionary significance. The rich diversity of the DRB1 gene underscores the fitness of the population and the significance of this locus for future selection programs. These results highlight the highly polymorphic nature of the DRB1 locus in Indian goat breeds, emphasizing its crucial role in modulating immune responses. Consequently, our study offers valuable insights for developing targeted breeding strategies to enhance disease resistance in goats, thereby providing practical implications for sustainable livestock management.
揭示印度山羊品种中 Cahi-DRB1 基因的遗传多样性有助于了解其免疫系统的恢复能力。虽然大量研究已经阐明了牛和绵羊的 MHC 多样性,但对山羊的研究仍然有限。因此,本研究旨在调查印度五个山羊品种的 cahi-DRB1 遗传多样性,共涉及 233 只山羊个体。采用基于 PCR 序列的分型方法,对 DRB1 片段(285 bp)进行了扩增和测序。对 PCR 产物进行纯化和测序。使用肽结合位点的 Wu-Kabat 指数评估了品种内的氨基酸变异性。选择分析包括通过非同义突变和同义突变的相对比率、Z 检验和田岛中性检验来评估正选择。研究结果表明,不同品种之间存在显著的杂合性(平均值:100%),核苷酸含量平均为:A 22.51%、T 18.62%、C 24.33%、G 34.35%。DRB1的平均距离在巴巴里山羊中最高(0.20),在奥斯曼纳巴迪山羊中最低(0.12),同时观察到较高的反转率。Wu-Kabat指数评估强调了DRB1肽结合位点(PBS)内的大量遗传变异,特定残基(12、14、33、58和87)显示出与抗原呈递相关的多态性。在所有品种中,DRB1位点(dN>dS)的正向选择压力都很明显,突出了其进化意义。DRB1 基因的丰富多样性强调了种群的适应性以及该位点对未来选择计划的重要性。这些结果突显了 DRB1 基因座在印度山羊品种中的高度多态性,强调了它在调节免疫反应中的关键作用。因此,我们的研究为制定有针对性的育种策略以提高山羊的抗病能力提供了宝贵的见解,从而为可持续的家畜管理提供了实际意义。
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引用次数: 0
Investigating the impact of a novel GHRHR gene variant on growth traits in Damascus goats 研究新型 GHRHR 基因变异对大马士革山羊生长特性的影响
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-07 DOI: 10.1016/j.smallrumres.2024.107366
Mervan Bayraktar , Nazan Koluman , Mohammed Baqur S. Al-Shuhaib

This study investigates the genotype and allele frequencies of three novel SNP loci (c.4218 T>G, c.2203 T>C, and c.7966 A>C) in the GHRHR gene within the Damascus goat breed and their associations with growth traits. The genotype frequencies for c.4218 T>G were 0.65 (TT), 0.15 (TG), and 0.20 (GG), with allele frequencies of 0.73 (T) and 0.27 (G), showing a significant deviation from Hardy-Weinberg equilibrium (HWE). The c.2203 T>C locus had genotype frequencies of 0.75 (TT) and 0.25 (CC), and the c.7966 A>C locus had 0.81 (AA) and 0.19 (CC), both consistent with HWE. Association analysis revealed significant correlations between the c.4218 T>G SNP and body weight and rump width, with the TT genotype showing the highest averages for both traits. The c.2203 T>C SNP was significantly associated with body weight and chest width, with the TT genotype again showing higher averages. The c.7966 A>C SNP was associated with chest depth and body length, with the AA genotype displaying lower averages for these traits. In silico predictions using multiple computational tools indicated that the identified missense SNP (p.31Ile>Ser) is novel and likely deleterious to the GHRHR protein's function and stability. Molecular docking demonstrated that the wild-type GHRHR binds more effectively with G protein alpha compared to the mutated form, predicting a mechanism through which this variant reduces the interactions of GHRHR with its cognate proteins. These findings provide valuable insights into the genetic factors influencing growth traits in Damascus goats and highlight the potential impact of the p.31Ile>Ser SNP on GHRHR functionality. This research underscores the importance of incorporating genetic markers in breeding programs to enhance growth traits and overall productivity.

本研究调查了大马士革山羊品种中 GHRHR 基因中三个新 SNP 位点(c.4218 T>G、c.2203 T>C 和 c.7966 A>C)的基因型和等位基因频率及其与生长性状的关系。c.4218 T>G的基因型频率分别为0.65(TT)、0.15(TG)和0.20(GG),等位基因频率分别为0.73(T)和0.27(G),与哈代-温伯格平衡(HWE)存在显著偏差。c.2203 T>C 基因位点的基因型频率为 0.75(TT)和 0.25(CC),c.7966 A>C 基因位点的基因型频率为 0.81(AA)和 0.19(CC),均与 HWE 一致。关联分析表明,c.4218 T>G SNP 与体重和臀宽有明显的相关性,TT 基因型在这两个性状上的平均值最高。c.2203 T>C SNP 与体重和胸宽显著相关,TT 基因型的平均值也较高。c.7966 A>C SNP 与胸深和体长相关,AA 基因型在这些性状上的平均值较低。利用多种计算工具进行的硅学预测表明,所发现的错义 SNP(p.31Ile>Ser)是一个新的 SNP,很可能对 GHRHR 蛋白的功能和稳定性有害。分子对接表明,与突变型相比,野生型 GHRHR 与 G 蛋白 alpha 的结合更有效,从而预测了该变异减少 GHRHR 与其同源蛋白相互作用的机制。这些发现为了解影响大马士革山羊生长性状的遗传因素提供了有价值的见解,并突出了p.31Ile>Ser SNP对GHRHR功能的潜在影响。这项研究强调了将遗传标记纳入育种计划以提高生长性状和整体生产力的重要性。
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引用次数: 0
Greenhouse gases measurement time reduction in Portable Accumulation Chambers with grazing sheep evaluated morning and afternoon 在便携式蓄积箱中测量温室气体的时间缩短,上午和下午对放牧的羊群进行评估
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-06 DOI: 10.1016/j.smallrumres.2024.107364
Dinah Pereira Abbott Rodrigues , Iohan Souza da Silva , Patrícia Guadagnin Vogel , Bruna Fernandes Machado , Lucas Biscaglia Miranda , Eduarda Jahnke Kepplin , Eliana Bordin Dutra , Lauan Machado Quinhones , Roberta Lago Giovelli , Douglas Leandro Scheid , Caren Alessandra da Rosa , Luciana Pötter , Sandro José Giacomini , Eduardo Bohrer de Azevedo

Portable Accumulation Chambers (PAC) represent an important tool for quantifying greenhouse gases (GHG) in small ruminants. The objectives of the study were to evaluate to reduce the PAC time evaluation in sheep without compromising the GHG, methane (CH4) and carbon dioxide (CO2) measurements and to evaluate the PAC methodology, considering the variability of gaseous emissions in the day. Four times the animals spent in the PAC (10, 20, 30 and 40 minutes) and two collection times during the day (morning and afternoon) were tested for two consecutive days. The sheep used in the study came from a field experiment where they were subjected to different grazing feeding systems (only Italian ryegrass, Italian ryegrass in a mixture of legumes (Persian clover (Trifolium resupinatum L.) and White clover (Trifolium repens L.)) pasture and lambs grazing Italian ryegrass and consuming an energetic supplement (RyeG + Sup)). The gas samples collected at PAC were analyzed for CH4 and CO2 concentration on a gas chromatograph. There was no interaction in CH4 and CO2 measurements between times, shifts and grazing feeding systems (p > 0.05). CH4 emission between times did not differ (p > 0.05), while CO2 emissions were higher in the first 10 minutes of measurement and lower in the remaining times, fitting the non-linear regression model, with a reduction until 27.7 minutes. In relation to shifts, there was a difference for CH4 (p < 0.01), and CO2 (p = 0.01) with the highest emissions of CH4 (21.7 ± 4.3 g/day) and CO2 (1282 ± 332 g/day) found in the afternoon. The results of this study indicate that 27.7 minutes of sheep staying in the PAC is enough to evaluate CH4 and CO2 emissions and to improve the estimate of the gas emissions, evaluations should be carried out in the morning and afternoon.

便携式蓄积室(PAC)是量化小型反刍动物体内温室气体(GHG)的重要工具。本研究的目的是在不影响温室气体、甲烷(CH4)和二氧化碳(CO2)测量的情况下,评估如何缩短绵羊的 PAC 评估时间,并评估 PAC 方法,同时考虑到一天中气体排放的可变性。连续两天对动物在 PAC 中的四次停留时间(10、20、30 和 40 分钟)和一天中的两次收集时间(上午和下午)进行了测试。研究中使用的绵羊来自一项田间试验,在该试验中,绵羊接受了不同的放牧喂养系统(仅吃意大利黑麦草、意大利黑麦草与豆科植物(波斯菊(Trifolium resupinatum L.)和白三叶(Trifolium repens L.))混合牧草以及羔羊吃意大利黑麦草并摄入能量补充剂(RyeG + Sup))。在 PAC 收集的气体样本在气相色谱仪上分析了 CH4 和 CO2 的浓度。不同时间、班次和放牧饲喂系统之间的 CH4 和 CO2 测量结果没有交互作用(p > 0.05)。不同时间的甲烷排放量没有差异(p > 0.05),而二氧化碳排放量在测量的前 10 分钟较高,其余时间较低,符合非线性回归模型,在 27.7 分钟前有所降低。在班次方面,CH4(p < 0.01)和 CO2(p = 0.01)存在差异,下午的 CH4(21.7 ± 4.3 克/天)和 CO2(1282 ± 332 克/天)排放量最高。该研究结果表明,羊在 PAC 中停留 27.7 分钟足以评估 CH4 和 CO2 的排放量,为了提高气体排放量的估计值,应在上午和下午进行评估。
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引用次数: 0
Comparison of methodologies for estimating enteric methane emission factors from sheep in smallholder systems in Africa: A case study from Ethiopia 非洲小农系统中羊的肠道甲烷排放系数估算方法比较:埃塞俄比亚案例研究
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-06 DOI: 10.1016/j.smallrumres.2024.107362
Endale B. Gurmu , Phyllis W. Ndung’u , Andreas Wilkes , Daniel Getahun , Michael W. Graham , Sonja M. Leitner , Svenja Marquardt , Daniel G. Mulat , Lutz Merbold , Tigist Worku , Jesse K. Gakige , Dereje Tadesse , Mekete Bekele , Claudia Arndt

In Ethiopia, enteric methane emissions from sheep contribute around 7 % to the national greenhouse gas (GHG) budget. This study examined the gross energy intake (GEI) and enteric methane emission factors (EFs) of sheep in smallholder systems in North Shewa, Ethiopia, using locally derived data via household surveys. The surveys encompassed two agroecological zones (AEZs) and analyzed various sheep classes across seasons. The study followed the Commonwealth Scientific Industrial Research Organization (CSIRO) Tier 2 methodology, which had previously been used in Kenya, and compared the results with those derived from the 2019 Refinement to the 2006 IPCC Guidelines for National Greenhouse Gas Inventories (IPCC Tier 2) methodology. The EFs from the two Tier 2 methodologies were compared with IPCC default Tier 1 EF. The ranges of GEI and EF estimated for the different sheep classes showed similarity with larger variations observed for IPCC Tier 2 estimates. The estimated GEI for the various sheep classes ranged from 11.1 to 13.8 MJ day−1 (‘CSIRO’ Tier 2) and 10.2–14.7 MJ day−1 (IPCC Tier 2). The estimated EFs ranged from 4.8 to 5.9 kg CH4 animal−1 year−1 (‘CSIRO’ Tier 2) and 4.5–6.5 kg CH4 animal−1 year−1 (IPCC Tier 2). The flock-level EF was computed by aggregating the EFs of the different sheep categories. The flock level EF estimated by the IPCC Tier 2 (6.0 ± 0.1 kg CH4 animal−1 year−1) was significantly higher compared to both the 'CSIRO' Tier 2 and IPCC Tier 1 methods. Based on the findings, we can say that variations in EF values emphasize the significance of taking different Tier 2 approaches into account when evaluating and comparing CH4 emissions estimates in smallholder sheep farming systems. However, there is a need for further investigations to compare the two Tier 2 methodologies against actual intake and emission measurements to decide which methodology is better.

在埃塞俄比亚,羊的肠道甲烷排放量约占全国温室气体(GHG)预算的 7%。本研究利用通过家庭调查获得的当地数据,研究了埃塞俄比亚北谢瓦小农系统中绵羊的总能量摄入量(GEI)和肠道甲烷排放因子(EFs)。调查范围包括两个农业生态区(AEZ),并分析了不同季节的不同绵羊等级。该研究采用了之前曾在肯尼亚使用过的英联邦科学工业研究组织(CSIRO)第 2 级方法,并将其结果与 IPCC 2006 年国家温室气体清单指南 2019 年修订版(IPCC 第 2 级)方法得出的结果进行了比较。两种第 2 级方法得出的环境系数与 IPCC 默认的第 1 级环境系数进行了比较。不同绵羊类别的估计温室气体排放指数(GEI)和排放系数(EF)的范围显示出相似性,而 IPCC 第 2 级估计值的差异较大。不同绵羊等级的估计 GEI 为 11.1 至 13.8 兆焦耳/天-1("CSIRO "第 2 级)和 10.2 至 14.7 兆焦耳/天-1(IPCC 第 2 级)。估计的 EF 为 4.8 至 5.9 千克 CH4 动物-1 年-1("CSIRO "第 2 级)和 4.5 至 6.5 千克 CH4 动物-1 年-1(IPCC 第 2 级)。羊群水平的 EF 是通过汇总不同羊类的 EF 计算得出的。与 "CSIRO "第 2 级方法和 IPCC 第 1 级方法相比,IPCC 第 2 级方法估算的羊群水平 EF(6.0 ± 0.1 kg CH4 animal-1 year-1)明显较高。根据研究结果,我们可以说,EF 值的变化强调了在评估和比较小农养羊系统的 CH4 排放估计值时考虑不同 Tier 2 方法的重要性。不过,还需要进一步调查,将两种第 2 级方法与实际摄入量和排放量测量结果进行比较,以确定哪种方法更好。
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引用次数: 0
Effect of essential oils, monensin sodium, and calcium malate on in vitro gas production, in vivo nutrient digestibility, and growth performance of finishing lambs 精油、莫能菌素钠和苹果酸钙对育成羔羊体外产气、体内营养消化率和生长性能的影响
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-06 DOI: 10.1016/j.smallrumres.2024.107363
Maria Angelica Ortiz Heredia , Pedro Arturo Martínez Hernández , Oscar Vicente Vazquez Mendoza , Moises Cipriano-Salazar , Edson Brodeli Figueroa Pacheco , Mona M.M.Y. Elghandour , Abdelfattah Z.M. Salem

Rumen modifiers play a crucial role in minimizing dietary energy loss for finishing lambs. This study endeavors to assess nutrient digestibility, in vitro gas production, productive performance, and carcass characteristics in finishing lambs through the incorporation of three rumen fermentation modifiers (monensin sodium, calcium malate, and essential oils). Thirty-five four-months-old Pelibuey lambs of 23.6 kg ± 3.2 were assigned to a completely randomized block design to evaluate five diets: control (CON, without rumen modifier), monensin sodium (MON, 25 g/t); calcium malate (MAL, 2.5 kg/t), essential oils (EO, 150 g/t); and EO (150 g/t) plus MON (25 g/t). Daily feed intake, average daily weight gain, feed conversion ratio, dorsal fat thickness, rib eye area, ruminal pH, and chewing time did not differ among the diets. Notably, feed efficiency trend to be superior (P = 0.07) in the EO lambs, showing a 15.31 % and 17.28 % increase versus CON and MON diets, respectively. Dry matter intake in g/kg0.75 was highest (P < 0.05) in MAL lambs by 23 % higher than lambs fed on diets added with EO and MON. The control diet (i.e., CON) exhibited the lowest (P < 0.05) in vivo dry matter digestibility compared to all other diets. Additionally, there was a trend (P = 0.056) towards reduced crude protein digestibility in CON diet. The inclusion of EO led to a higher (P < 0.05) proportion of ruminal acetic acid and a decrease (P < 0.05) in propionic acid versus the CON diet. The observed effects can be attributed to the antimicrobial activity of EO, specifically their secondary metabolites, which demonstrate antimicrobial properties. This underscores their potential in addressing concerns related to antibiotic use. Compared to MON, dietary inclusion with EO improves feed efficiency, with no notable effects on average daily gain, final weight, or the investigated carcass characteristics. The EO supplementation emerges as a practical alternative to antibiotic ionophore monensin for enhancing feed efficiency in finishing feedlot lambs.

瘤胃改良剂在减少育成羔羊日粮能量损失方面起着至关重要的作用。本研究试图通过添加三种瘤胃发酵调节剂(莫能菌素钠、苹果酸钙和精油)来评估育成羔羊的营养消化率、体外产气量、生产性能和胴体特征。将 35 只四个月大的 23.6 kg ± 3.2 的 Pelibuey 羔羊分配到完全随机区组设计中,以评估五种日粮:对照组(CON,无瘤胃改良剂)、莫能菌素钠(MON,25 g/t);苹果酸钙(MAL,2.5 kg/t)、精油(EO,150 g/t);以及 EO(150 g/t)加 MON(25 g/t)。不同日粮的日采食量、平均日增重、饲料转化率、背脂厚度、肋眼面积、瘤胃pH值和咀嚼时间均无差异。值得注意的是,EO羔羊的饲料效率呈上升趋势(P = 0.07),与CON和MON日粮相比,分别提高了15.31%和17.28%。以克/千克0.75计的干物质采食量,MAL羔羊最高(P = 0.05),比添加了EO和MON的日粮的羔羊高23%。与所有其它日粮相比,对照日粮(即 CON)的体内干物质消化率最低(P < 0.05)。此外,CON 日粮的粗蛋白消化率有降低的趋势(P = 0.056)。与 CON 日粮相比,添加 EO 会导致瘤胃乙酸比例升高(P < 0.05),丙酸比例降低(P < 0.05)。观察到的效果可归因于环氧乙烷的抗菌活性,特别是其二级代谢产物,它们具有抗菌特性。这凸显了环氧乙烷在解决抗生素使用相关问题方面的潜力。与单胃动物相比,日粮中添加环氧乙烷可提高饲料效率,但对平均日增重、最终体重或所调查的胴体特征没有明显影响。在提高育成饲养场羔羊的饲料效率方面,补充环氧乙烷是抗生素离子肽莫能菌素的一种实用替代品。
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引用次数: 0
INTRA- AND INTER-HOST EVOLUTION OF HUMAN NOROVIRUS IN HEALTHY ADULTS. 健康成人中人类诺如病毒的宿主内和宿主间进化。
3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-09-05 DOI: 10.1101/2023.05.30.542907
Sasirekha Ramani, Sara J Javornik Cregeen, Anil Surathu, Frederick H Neill, Donna M Muzny, Harsha Doddapaneni, Vipin K Menon, Kristi L Hoffman, Matthew C Ross, Ginger Metcalf, Antone R Opekun, David Y Graham, Richard A Gibbs, Joseph F Petrosino, Mary K Estes, Robert L Atmar

Background: Human noroviruses are a leading cause of acute and sporadic gastroenteritis worldwide. The evolution of human noroviruses in immunocompromised persons has been evaluated in many studies. Much less is known about the evolutionary dynamics of human norovirus in healthy adults.

Methods: We used sequential samples collected from a controlled human infection study with GI.1/Norwalk/US/68 virus to evaluate intra- and inter-host evolution of a human norovirus in healthy adults. Up to 12 samples from day 1 to day 56 post-challenge were sequenced using a norovirus-specific capture probe method.

Results: Complete genomes were assembled, even in samples that were below the limit of detection of standard RT-qPCR assays, up to 28 days post-challenge. Analysis of 123 complete genomes showed changes in the GI.1 genome in all persons, but there were no conserved changes across all persons. Single nucleotide variants resulting in non-synonymous amino acid changes were observed in all proteins, with the capsid VP1 and nonstructural protein NS3 having the largest numbers of changes.

Conclusions: These data highlight the potential of a new capture-based sequencing approach to assemble human norovirus genomes with high sensitivity and demonstrate limited conserved immune pressure-driven evolution of GI.1 virus in healthy adults.

背景:人类诺如病毒是全球急性和散发性肠胃炎的主要病因。许多研究已经评估了人类诺如病毒在免疫力低下人群中的进化情况。但人们对健康成年人体内诺如病毒的进化动态却知之甚少:方法:我们使用从 GI.1/Norwalk/US/68 病毒控制性人体感染研究中收集的连续样本来评估健康成年人体内诺如病毒的宿主内和宿主间进化。使用诺如病毒特异性捕获探针方法对多达12个样本进行了测序,这些样本从病毒感染后第1天到第56天:结果:即使是在病毒感染后 28 天内低于标准 RT-qPCR 检测限的样本,也能组装出完整的基因组。对 123 个完整基因组的分析表明,所有人的 GI.1 基因组都发生了变化,但所有人的基因组都没有发生一致的变化。在所有蛋白质中都观察到了导致非同义氨基酸变化的单核苷酸变异,其中囊膜 VP1 和非结构蛋白 NS3 的变化数量最多:这些数据凸显了一种新的基于捕获的测序方法在高灵敏度组装人类诺如病毒基因组方面的潜力,并证明了在健康成年人中 GI.1 病毒由免疫压力驱动的进化是有限的。
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引用次数: 0
Investigation of chia seed (Salvia hispanica L.) extract supplementation to extender on post-thawing ram sperm parameters and genes-related antioxidant capacity 研究将奇异籽(Salvia hispanica L.)提取物补充到扩增剂中对公羊解冻后精子参数和基因相关抗氧化能力的影响
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-08-30 DOI: 10.1016/j.smallrumres.2024.107345
Wael A. Khalil , Aya A. Ismail , Mostafa A. El-Harairy , Sally Ibrahim , Haney Samir , Ayman A. Swelum , Abdel-Khalek E. Abdel-Khalek

Ram semen cryopreservation is not so widely used compared to bull semen. This study was carried out to explore the potential of methanolic chia seed extract (MCSE) in ram semen extender on kinematics, acrosome, apoptosis, antioxidant capacity, genes-related antioxidants, and caspase-3 in post-thawing ram semen. Semen from Rahmani rams (n=5) was collected, pooled, and diluted with Tris-extender (15 % egg yolk, 1 % soybean lecithin and 5 % glycerol) supplemented with MCSE (0, 125, 250, 375, and 500 µg/mL). MCSE had 67.5 % linolenic acid, 17.99 % linoleic acid, total phenolic, and flavonoid compounds. MCSE had higher antioxidant activity by DPPH (2,2-diphenyl-1-picryl-hydrazyl-hydrate) and FRAP (Ferric-reducing antioxidant power) assays. MCSE (500 µg/mL) significantly improved sperm motility (43.6 vs. 30.0 %), vitality (44.0 vs. 30.7 %), and membrane integrity (43.1 vs. 31.3 %) as well as sperm velocity parameters and acrosome integrity (53.4 vs. 36.2 %) after thawing. MCSE at a level of 500 µg/mL increased viability, total antioxidant capacity level, and decreased apoptotic spermatozoa and malondialdehyde levels in post-thawed semen. MCSE at levels of 250, 375, and 500 µg/mL decreased caspase-3 level to 42.8, 35.6, and 30.0 % compared to control (54.6 %) after thawing, and resulted in a clear up-regulation of antioxidant-related genes of superoxide dismutase 1, catalase, glutathione peroxidase 1, and GA-binding protein transcription factor subunit beta-1 (GAPP1). The highest impact was observed for MCSE on GAPP1 as compared to other profiles as well as for MCSE at 500 µg/mL as compared to with other levels. All MCSE levels decreased Caspase-3 mRNA by about 44, 51, 61, and 61 %, respectively. In conclusion, MCSE had higher anti-oxidative activity. Tris-soya bean lecithin extender supplemented with MCSE at a level of 500 µg/mL, as a natural antioxidant, has a vital role in maintaining the freezing ability of ram spermatozoa after cryopreservation.

与公牛精液相比,公羊精液冷冻保存的应用并不广泛。本研究旨在探索甲醇奇异籽提取物(MCSE)在公羊精液冷冻剂中对公羊精液解冻后的运动学、顶体、凋亡、抗氧化能力、基因相关抗氧化剂和 Caspase-3 的潜在影响。收集拉赫马尼公羊(n=5)的精液,汇集后用添加了 MCSE(0、125、250、375 和 500 µg/mL)的 Tris-extender(15 % 蛋黄、1 % 大豆卵磷脂和 5 % 甘油)稀释。MCSE 含有 67.5 % 的亚麻酸、17.99 % 的亚油酸、总酚类和类黄酮化合物。通过 DPPH(2,2-二苯基-1-苦基-肼水合物)和 FRAP(铁还原抗氧化能力)检测,MCSE 具有更高的抗氧化活性。解冻后,MCSE(500 µg/mL)能明显改善精子活力(43.6% 对 30.0%)、活力(44.0% 对 30.7%)、膜完整性(43.1% 对 31.3%)以及精子速度参数和顶体完整性(53.4% 对 36.2%)。浓度为 500 µg/mL 的 MCSE 可提高解冻后精液中精子的存活率和总抗氧化能力,减少凋亡精子和丙二醛含量。与对照组(54.6%)相比,解冻后 250、375 和 500 微克/毫升浓度的 MCSE 可将 Caspase-3 水平降至 42.8%、35.6% 和 30.0%,并导致超氧化物歧化酶 1、过氧化氢酶、谷胱甘肽过氧化物酶 1 和 GA 结合蛋白转录因子亚基 beta-1 (GAPP1) 等抗氧化相关基因明显上调。与其他分析相比,MCSE 对 GAPP1 的影响最大;与其他水平相比,MCSE 在 500 微克/毫升时对 GAPP1 的影响最大。所有 MCSE 水平的 Caspase-3 mRNA 分别减少了约 44%、51%、61% 和 61%。总之,MCSE 具有更高的抗氧化活性。作为一种天然抗氧化剂,添加了500微克/毫升MCSE的三色豆卵磷脂扩展剂在维持公羊精子冷冻保存后的冷冻能力方面具有重要作用。
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引用次数: 0
Flow cytometry evaluation of Dalagh ram post-thaw semen incorporated with curcumin-loaded niosomal nanocarriers 对含有姜黄素纳米载体的达拉格公羊解冻后精液进行流式细胞术评估
IF 1.6 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2024-08-27 DOI: 10.1016/j.smallrumres.2024.107346
Alireza Sadegh, Niloofar Nasiri-Foomani, Rohollah Mastani, Firooz Samadi

Optimization of cryopreservation media to attenuate oxidative damage on post-thaw spermatozoa is crucial. This study aimed to assess the antioxidant functionality of curcumin-loaded niosomal nanocarriers (CurLNN) on the quality of cryopreserved ram spermatozoa. Semen samples (n=16) of four Dalagh rams were extended with different concentrations (10 or 20 μL) of curcumin (Cur) or CurLNN and then cryopreserved using a standard protocol. The findings indicated that sperm cells exposed to curcumin, specifically CurLNN at a concentration of 20 μL, displayed increased levels of total and progressive motility, greater lateral head displacement and linearity values, improved plasma membrane function, and reduced abnormality (P < 0.05). Viability and plasma membrane functionality increased by supplementing cryopreservation medium with Cur20 and CurLNN (P < 0.05). A significant decline (P < 0.05) in malondialdehyde (MDA) and reactive oxygen species (ROS) concentrations was observed by supplementing cryopreservation medium with both curcumin and its nano-sized. There was a significant (P < 0.05) increase in the percentage of spermatozoa with mitochondrial activity when the cryopreservation medium was incorporated with CurLNN. Spermatozoa treated with CurLNN demonstrated higher viability and lower late apoptosis (P < 0.05) compared with other groups. There were no differences among groups in terms of the percentage of necrotic and early apoptotic spermatozoa. In conclusion, the results of this study demonstrated that nano-sized curcumin, particularly at a 20 µL concentration, had a higher antioxidant potential, leading to improved sperm functional quality by mitigating oxidative damage during cryopreservation.

优化冷冻保存介质以减轻解冻后精子的氧化损伤至关重要。本研究旨在评估姜黄素载体纳米载体(CurLNN)的抗氧化功能对冷冻保存的公羊精子质量的影响。用不同浓度(10 或 20 μL)的姜黄素(Cur)或 CurLNN 扩展四种达拉公羊的精液样本(n=16),然后用标准方案进行冷冻保存。研究结果表明,暴露于姜黄素(特别是浓度为 20 μL 的姜黄素-LNN)的精子细胞显示出更高水平的总活力和渐进活力、更大的侧头位移和线性值、更好的质膜功能以及更低的畸形率(P < 0.05)。在冷冻保存培养基中添加 Cur20 和 CurLNN 可提高存活率和质膜功能(P <0.05)。在冷冻保存培养基中添加姜黄素及其纳米尺寸后,丙二醛(MDA)和活性氧(ROS)浓度明显下降(P < 0.05)。在冷冻保存培养基中添加姜黄素及其纳米粒后,具有线粒体活性的精子百分比明显增加(P < 0.05)。与其他组相比,经 CurLNN 处理的精子存活率更高,后期凋亡率更低(P < 0.05)。就坏死精子和早期凋亡精子的百分比而言,各组之间没有差异。总之,这项研究的结果表明,纳米级姜黄素,尤其是 20 µL 浓度的姜黄素,具有更高的抗氧化潜力,可在冷冻保存过程中减轻氧化损伤,从而提高精子的功能质量。
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