Pub Date : 2025-10-08DOI: 10.1016/j.smallrumres.2025.107630
Emilie Cobo , Jérôme Raoul , Loys Bodin
From an economic perspective, meat sheep farms depend on several components, such as reproductive traits, which can be influenced by numerous factors of variation. In this study, the effects of two kinds of oestrus, a) induced oestrus (IO) and b) the first natural return oestrus (FRO), and of the genotype encoding a hyperprolific gene (FecL) on prolificacy and fertility were tested. The genetic parameters of these two traits were also estimated using BLUP animal models with ASReml software. The data related to 68,652 matings were recorded from 2010 to 2020 for 20,770 ewes from the Lacaune Ovi-Test population. The oestrus type, which is associated with the use of hormonal treatment, improved the two reproductive traits studied. As expected, one copy of the mutated allele of the FecL gene had an effect on the prolificacy of + 0.5 lambs per lambing but had no effect on fertility. Moreover, the animal variances estimated during this study for prolificacy and fertility after IO and on FRO were low but still explained a share of the phenotype variance of ± 0.5 lambs per litter and ± 0.20 fertility points around the average. The repeatabilities and heritabilities of prolificacy and fertility were low but consistent with the literature. Owing to the structural relationship between the oestrus type in our dataset, less data were available on FRO, making its genetic evaluation less accurate than the genetic evaluation on IO.
{"title":"Estimation of genetic parameters for fertility and prolificacy in the Lacaune meat sheep population carrying a hyperprolific gene","authors":"Emilie Cobo , Jérôme Raoul , Loys Bodin","doi":"10.1016/j.smallrumres.2025.107630","DOIUrl":"10.1016/j.smallrumres.2025.107630","url":null,"abstract":"<div><div>From an economic perspective, meat sheep farms depend on several components, such as reproductive traits, which can be influenced by numerous factors of variation. In this study, the effects of two kinds of oestrus, a) induced oestrus (IO) and b) the first natural return oestrus (FRO), and of the genotype encoding a hyperprolific gene (FecL) on prolificacy and fertility were tested. The genetic parameters of these two traits were also estimated using BLUP animal models with ASReml software. The data related to 68,652 matings were recorded from 2010 to 2020 for 20,770 ewes from the Lacaune Ovi-Test population. The oestrus type, which is associated with the use of hormonal treatment, improved the two reproductive traits studied. As expected, one copy of the mutated allele of the FecL gene had an effect on the prolificacy of + 0.5 lambs per lambing but had no effect on fertility. Moreover, the animal variances estimated during this study for prolificacy and fertility after IO and on FRO were low but still explained a share of the phenotype variance of ± 0.5 lambs per litter and ± 0.20 fertility points around the average. The repeatabilities and heritabilities of prolificacy and fertility were low but consistent with the literature. Owing to the structural relationship between the oestrus type in our dataset, less data were available on FRO, making its genetic evaluation less accurate than the genetic evaluation on IO.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107630"},"PeriodicalIF":1.4,"publicationDate":"2025-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145322070","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-04DOI: 10.1016/j.smallrumres.2025.107629
Khadija Begum , Md Ahaduzzaman , Azizunnesa
The study was designed to estimate the gestational age (GA) and determine the appropriate parameters related to gestational stages in Jamunapari cross breed goats (Jamunapari × Black Bengal), conducted at Chattogram district, Bangladesh. For this purpose, six different gestational parameters [gestational sac diameter (GSD), gestational sac length (GSL), crown- rump length (CRL), trunk diameter (TD), bi-parietal diameter (BPD) and placentome diameter (PD)] were checked by ultrasonography at different stages of pregnancy. Goats (n = 150) were used for pregnancy diagnosis by trans-abdominal ultrasonography. Pregnancy was confirmed by the presence of amniotic fluid, fetal heartbeat, fetal ribs, femur, trunk etc. The gestational age was estimated statistically (EGA) and compared to actual GA (AGA). GSD, GSL, PD and CRL were significantly different between estimated and actual gestation age while PD did not vary significantly up to the second trimester of pregnancy. At early stage of pregnancy, GSD, GSL and CRL did not show significant variation between estimated and actual gestational age. PD and BPD in mid pregnancy while TD in late pregnancy were not significantly different between EGA and AGA. Significant relations were detected between actual pregnancy stage and certain parameters at different stages of pregnancy. The EGA, when calculated with a margin of ±1–5 days, did not significantly vary in estimating the expected date of delivery (EDD) across all measured parameters, except for TD when subtracting 1–5 days. The study concludes that GSD, GSL, and CRL are highly reliable for estimating gestational age in the first trimester; BPD, TD, and PD are reliable in the second trimester; and TD is most reliable in the third trimester. The EDD may vary by ±1–5 days when using the derived equations for all six parameters, but it may vary by ±4 days specifically when using TD measurements.
在孟加拉国Chattogram地区进行的研究旨在估计Jamunapari杂交山羊(Jamunapari × Black Bengal)的胎龄(GA)并确定与妊娠期相关的适当参数。为此,在妊娠不同阶段通过超声检查6种不同的妊娠参数[孕囊直径(GSD)、孕囊长度(GSL)、冠臀长度(CRL)、干径(TD)、双顶叶直径(BPD)和胎盘直径(PD)]。山羊(n = 150)经腹超声诊断妊娠。通过羊水、胎儿心跳、胎儿肋骨、股骨、躯干等检查证实妊娠。统计估计胎龄(EGA)并与实际胎龄(AGA)进行比较。GSD、GSL、PD和CRL在估计胎龄和实际胎龄之间存在显著差异,而PD在妊娠中期前无显著差异。在妊娠早期,GSD、GSL和CRL在估计胎龄和实际胎龄之间没有显著差异。妊娠中期PD和BPD,妊娠晚期TD在EGA和AGA之间无显著差异。实际妊娠期与不同妊娠期的某些参数存在显著相关性。当EGA以±1-5天的误差计算时,除了TD减去1-5天外,所有测量参数在估计预期交货日期(EDD)方面没有显着变化。本研究得出结论:GSD、GSL和CRL在估计妊娠前三个月的胎龄方面是高度可靠的;BPD、TD和PD在妊娠中期是可靠的;而TD在妊娠晚期最为可靠。当使用所有六个参数的导出方程时,EDD可能会变化±1-5天,但当使用TD测量时,EDD可能会变化±4天。
{"title":"Validation of gestational age by developing formulae and assessing embryonic and fetal development by ultrasonic fetometry in Bangladeshi crossbreed (Jamunapari × Black Bengal) goats","authors":"Khadija Begum , Md Ahaduzzaman , Azizunnesa","doi":"10.1016/j.smallrumres.2025.107629","DOIUrl":"10.1016/j.smallrumres.2025.107629","url":null,"abstract":"<div><div>The study was designed to estimate the gestational age (GA) and determine the appropriate parameters related to gestational stages in Jamunapari cross breed goats (Jamunapari × Black Bengal), conducted at Chattogram district, Bangladesh. For this purpose, six different gestational parameters [gestational sac diameter (GSD), gestational sac length (GSL), crown- rump length (CRL), trunk diameter (TD), bi-parietal diameter (BPD) and placentome diameter (PD)] were checked by ultrasonography at different stages of pregnancy. Goats (n = 150) were used for pregnancy diagnosis by trans-abdominal ultrasonography. Pregnancy was confirmed by the presence of amniotic fluid, fetal heartbeat, fetal ribs, femur, trunk etc. The gestational age was estimated statistically (EGA) and compared to actual GA (AGA). GSD, GSL, PD and CRL were significantly different between estimated and actual gestation age while PD did not vary significantly up to the second trimester of pregnancy. At early stage of pregnancy, GSD, GSL and CRL did not show significant variation between estimated and actual gestational age. PD and BPD in mid pregnancy while TD in late pregnancy were not significantly different between EGA and AGA. Significant relations were detected between actual pregnancy stage and certain parameters at different stages of pregnancy. The EGA, when calculated with a margin of ±1–5 days, did not significantly vary in estimating the expected date of delivery (EDD) across all measured parameters, except for TD when subtracting 1–5 days. The study concludes that GSD, GSL, and CRL are highly reliable for estimating gestational age in the first trimester; BPD, TD, and PD are reliable in the second trimester; and TD is most reliable in the third trimester. The EDD may vary by ±1–5 days when using the derived equations for all six parameters, but it may vary by ±4 days specifically when using TD measurements.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107629"},"PeriodicalIF":1.4,"publicationDate":"2025-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145270366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-02DOI: 10.1016/j.smallrumres.2025.107628
Lorena Jamila Alves Ferreira Guimarães , Letícia Steves dos Santos , Tatiane Pacheco Barenco de Oliveira , Raymundo Rizaldo Pinheiro , Maria Leonora Veras De Mello , Juliana Patrão de Paiva , Carla Holandino , Argemiro Sanavria , Nathalie Costa da Cunha , Mário Felipe Alvarez Balaro
Small ruminant lentiviruses (SRLV) impact productivity, health, and welfare. With no effective treatments available, homeopathy offers a safe, low-cost, residue-free alternative. This study evaluated two distinct homeopathic protocols, a homeopathic nosode (Gnosode) and a homeopathic complex of plant/mineral origin (Ghomeopathic), using a triple-blind, placebo-controlled design in SRLV-infected goats. Forty-two Saanen goats with SRLV-confirmed chronic osteoarthritis and weight loss were randomly assigned to three groups: SRLV nosode (Gnosode; n = 14), homeopathic complex (Ghomeopathic; n = 14), or placebo (Gplacebo; n = 14). Treatments were administered orally (1 mL/day) for 90 days. Monthly assessments included clinical exams, joint ultrasound, and milk production records. Both homeopathic groups showed significant improvements (p < 0.05) in body condition score, weight, articular index and joint width compared to placebo. Ultrasound revealed lower carpal joint lesion measures in treated groups, including reduced distance from the joint capsule to the subchondral space, area, and perimeter of lesions (p < 0.05). Homeopathic treatments improved clinical and ultrasound outcomes, as well as productive parameters, in SRLV-infected goats. These results suggest homeopathy as a promising tool for managing chronic osteoarthritis and weight loss associated with SRLV.
小反刍动物慢病毒(SRLV)影响生产力、健康和福利。由于没有有效的治疗方法,顺势疗法提供了一种安全、低成本、无残留的替代方法。本研究在srlv感染山羊中采用三盲、安慰剂对照设计,评估了两种不同的顺势疗法方案,一种顺势疗法制剂(Gnosode)和一种植物/矿物来源的顺势疗法复合物(ghomeopathy)。42只经SRLV确诊的慢性骨关节炎和体重减轻的Saanen山羊被随机分为三组:SRLV nosode (n = 14)、顺势疗法复合物(ghomeopathy; n = 14)和安慰剂(Gplacebo; n = 14)。治疗方法为口服(1 mL/天),疗程90天。每月评估包括临床检查、关节超声和产奶量记录。与安慰剂组相比,两组在身体状况评分、体重、关节指数和关节宽度方面均有显著改善(p <; 0.05)。超声显示治疗组的下腕关节病变措施,包括关节囊到软骨下间隙的距离、面积和病变周长减少(p <; 0.05)。顺势疗法治疗改善了srlv感染山羊的临床和超声结果以及生产参数。这些结果表明顺势疗法是治疗慢性骨关节炎和SRLV相关体重减轻的有希望的工具。
{"title":"Homeopathic intervention enhances osteoarthritis management and productivity in dairy goats with Small Ruminant Lentiviruses: A triple-blind, placebo-controlled study","authors":"Lorena Jamila Alves Ferreira Guimarães , Letícia Steves dos Santos , Tatiane Pacheco Barenco de Oliveira , Raymundo Rizaldo Pinheiro , Maria Leonora Veras De Mello , Juliana Patrão de Paiva , Carla Holandino , Argemiro Sanavria , Nathalie Costa da Cunha , Mário Felipe Alvarez Balaro","doi":"10.1016/j.smallrumres.2025.107628","DOIUrl":"10.1016/j.smallrumres.2025.107628","url":null,"abstract":"<div><div>Small ruminant lentiviruses (SRLV) impact productivity, health, and welfare. With no effective treatments available, homeopathy offers a safe, low-cost, residue-free alternative. This study evaluated two distinct homeopathic protocols, a homeopathic nosode (Gnosode) and a homeopathic complex of plant/mineral origin (Ghomeopathic), using a triple-blind, placebo-controlled design in SRLV-infected goats. Forty-two Saanen goats with SRLV-confirmed chronic osteoarthritis and weight loss were randomly assigned to three groups: SRLV nosode (Gnosode; n = 14), homeopathic complex (Ghomeopathic; n = 14), or placebo (Gplacebo; n = 14). Treatments were administered orally (1 mL/day) for 90 days. Monthly assessments included clinical exams, joint ultrasound, and milk production records. Both homeopathic groups showed significant improvements (p < 0.05) in body condition score, weight, articular index and joint width compared to placebo. Ultrasound revealed lower carpal joint lesion measures in treated groups, including reduced distance from the joint capsule to the subchondral space, area, and perimeter of lesions (p < 0.05). Homeopathic treatments improved clinical and ultrasound outcomes, as well as productive parameters, in SRLV-infected goats. These results suggest homeopathy as a promising tool for managing chronic osteoarthritis and weight loss associated with SRLV.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107628"},"PeriodicalIF":1.4,"publicationDate":"2025-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145269325","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-09-30DOI: 10.1016/j.smallrumres.2025.107627
Marykutty Thomas , Jinty Sukumaran , P.M. Rojan , M.R. Akhila , J. Saalom King , K.A. Bindu
Attappady Black goats, reared by tribal communities in South India, have adapted to extensive grazing in mountainous forest ecosystems, undergoing natural selection-driven evolution. However, their genetic origins and phylogeographic history remain largely unexplored. In this study, we report the first complete mitochondrial genome sequence of Attappady Black goats to elucidate their matrilineal ancestry, genetic diversity and evolutionary relationships. The 16,641 bp mitogenome exhibits the typical caprine mitochondrial architecture, comprising 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), and two ribosomal RNAs (rRNAs). A total of 20 single nucleotide polymorphisms (SNPs) were identified in the coding region, including three non-synonymous SNPs, with two located in the cytochrome c oxidase subunit III (COX3) gene and one in NADH dehydrogenase subunit 6 (ND6), suggesting potential functional implications. Additionally, a novel homoplasmic dinucleotide deletion was detected in the 16S rRNA gene. While most tRNAs exhibited a conserved cloverleaf secondary structure, tRNA-Lys lacked a complete D-arm and tRNA-Ser displayed a truncated D-arm, indicative of lineage-specific structural adaptations. Phylogenetic analysis revealed a closer matrilineal affinity of Attappady Black goats with Iranian bezoars than with other domestic goat breeds, suggesting a distinct evolutionary lineage. These findings provide valuable insights into the mitogenomic diversity, structural adaptations and evolutionary history of Attappady Black goats, contributing to a deeper understanding of caprine domestication and phylogeography.
{"title":"Mitogenomic characterization and phylogenetic insights into Attappady Black goats of South India: Evidence of matrilineal affinity with Iranian bezoars","authors":"Marykutty Thomas , Jinty Sukumaran , P.M. Rojan , M.R. Akhila , J. Saalom King , K.A. Bindu","doi":"10.1016/j.smallrumres.2025.107627","DOIUrl":"10.1016/j.smallrumres.2025.107627","url":null,"abstract":"<div><div>Attappady Black goats, reared by tribal communities in South India, have adapted to extensive grazing in mountainous forest ecosystems, undergoing natural selection-driven evolution. However, their genetic origins and phylogeographic history remain largely unexplored. In this study, we report the first complete mitochondrial genome sequence of Attappady Black goats to elucidate their matrilineal ancestry, genetic diversity and evolutionary relationships. The 16,641 bp mitogenome exhibits the typical caprine mitochondrial architecture, comprising 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), and two ribosomal RNAs (rRNAs). A total of 20 single nucleotide polymorphisms (SNPs) were identified in the coding region, including three non-synonymous SNPs, with two located in the cytochrome c oxidase subunit III (COX3) gene and one in NADH dehydrogenase subunit 6 (ND6), suggesting potential functional implications. Additionally, a novel homoplasmic dinucleotide deletion was detected in the 16S rRNA gene. While most tRNAs exhibited a conserved cloverleaf secondary structure, tRNA-Lys lacked a complete D-arm and tRNA-Ser displayed a truncated D-arm, indicative of lineage-specific structural adaptations. Phylogenetic analysis revealed a closer matrilineal affinity of Attappady Black goats with Iranian bezoars than with other domestic goat breeds, suggesting a distinct evolutionary lineage. These findings provide valuable insights into the mitogenomic diversity, structural adaptations and evolutionary history of Attappady Black goats, contributing to a deeper understanding of caprine domestication and phylogeography.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107627"},"PeriodicalIF":1.4,"publicationDate":"2025-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145269326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Small ruminant (sheep and goat) production is often promoted as low-labor and low-investment, yet empirical evidence on how management systems affect performance in urban and peri-urban contexts remains limited. This study investigates the determinants of management system choice among livestock farmers and evaluates the causal effects of these systems on mortality rates and farm income. Using data from 400 randomly sampled farmers in Ejisu and Juaben (Ashanti region, Ghana) during April–May 2024, we employed a multinomial logit model to analyze system adoption drivers. A multinomial treatment effect model further isolated the causal impacts of management systems on outcomes. Results indicate that 50.5 % of farmers use free-range systems, 30 % semi-intensive, and 20 % intensive systems. Key determinants for adopting semi-intensive or intensive systems over free-range include: gender, education, herd size, extension service access, primary occupation, religious affiliation, marital status, engagement in non-farm businesses, and market proximity. Critically, semi-intensive and intensive systems significantly reduced mortality rates and increased farm income compared to free-range systems. These findings demonstrate that targeted investments in livestock infrastructure (e.g., housing), veterinary services, extension support, and technical training can enhance productivity and economic returns for smallholders. To ensure sustainable urban small ruminant production, policies must be context-specific, accounting for the distinct requirements of each management system. Additionally, the extensive or free-range systems could be improved by adopting animal tethering on communal lands to reduce mortality rates.
{"title":"Income over loss: How management systems lower mortality and increase farm incomes from small ruminants in urbanizing Africa","authors":"Faizal Adams , Amos Mensah , Ebenezer Donkor , Ayat Ullah , Antoinette Simpah Anim-Jnr , James Osei Mensah , Seth Etuah , Gifty Boakye Appiah","doi":"10.1016/j.smallrumres.2025.107626","DOIUrl":"10.1016/j.smallrumres.2025.107626","url":null,"abstract":"<div><div>Small ruminant (sheep and goat) production is often promoted as low-labor and low-investment, yet empirical evidence on how management systems affect performance in urban and peri-urban contexts remains limited. This study investigates the determinants of management system choice among livestock farmers and evaluates the causal effects of these systems on mortality rates and farm income. Using data from 400 randomly sampled farmers in Ejisu and Juaben (Ashanti region, Ghana) during April–May 2024, we employed a multinomial logit model to analyze system adoption drivers. A multinomial treatment effect model further isolated the causal impacts of management systems on outcomes. Results indicate that 50.5 % of farmers use free-range systems, 30 % semi-intensive, and 20 % intensive systems. Key determinants for adopting semi-intensive or intensive systems over free-range include: gender, education, herd size, extension service access, primary occupation, religious affiliation, marital status, engagement in non-farm businesses, and market proximity. Critically, semi-intensive and intensive systems significantly reduced mortality rates and increased farm income compared to free-range systems. These findings demonstrate that targeted investments in livestock infrastructure (e.g., housing), veterinary services, extension support, and technical training can enhance productivity and economic returns for smallholders. To ensure sustainable urban small ruminant production, policies must be context-specific, accounting for the distinct requirements of each management system. Additionally, the extensive or free-range systems could be improved by adopting animal tethering on communal lands to reduce mortality rates.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107626"},"PeriodicalIF":1.4,"publicationDate":"2025-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145223128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The aim of the study is to classify lambs that will survive or die before weaning by using animal- and farm-related factors as predictors through machine learning (ML) algorithms, and to identify potential risk factors associated with lamb mortality in housed management systems. Survival records from birth to weaning of a total of 5539 lambs were analysed from ten farms, which reared Kivircik sheep. To predict whether the lambs will survive from birth to weaning, Decision Tree (DT), Random Forest (RF), K-Nearest Neighbors (KNN), Naïve Bayes (NB), Boosting, Logistic Regression (LR), Support Vector Machine (SVM) and Multilayer Perceptron (MLP) classifiers were tested. The survival of lambs in the raw dataset was 91.7 %. The highest accuracy (0.925) in classifying living or dead lambs was obtained by Boosting algorithm, while the second highest performance (accuracy of 0.897) was shown by RF. NB, LR, and SVM algorithms achieved relatively lower classification accuracies, ranging between 65 % and 67 %. According to the Boosting algorithm, birth weight was identified as the variable with the highest relative influence with 43.4 %. It was followed by birth month (12.2 %), number of ewes per shepherd (11.2 %), floor space per ewe (10.0 %), and birth rank group (7.0 %). In conclusion, Boosting algorithm demonstrated high classification accuracy in predicting lamb survival. Moreover, the strong predictive influences of birth weight, number of ewes per shepherd, floor space per ewe, and birth rank group indicate the importance of focusing on gestational nutritional management, husbandry conditions, and overall herd management practices in developing intervention strategies to reduce lamb mortality in housed management systems.
{"title":"Machine learning-based prediction of pre-weaning lamb survival using animal-, housing-, and management-related factors","authors":"Bulent Ekiz, Pembe Dilara Kecici, Hulya Yalcintan, Alper Yilmaz","doi":"10.1016/j.smallrumres.2025.107625","DOIUrl":"10.1016/j.smallrumres.2025.107625","url":null,"abstract":"<div><div>The aim of the study is to classify lambs that will survive or die before weaning by using animal- and farm-related factors as predictors through machine learning (ML) algorithms, and to identify potential risk factors associated with lamb mortality in housed management systems. Survival records from birth to weaning of a total of 5539 lambs were analysed from ten farms, which reared Kivircik sheep. To predict whether the lambs will survive from birth to weaning, Decision Tree (DT), Random Forest (RF), K-Nearest Neighbors (KNN), Naïve Bayes (NB), Boosting, Logistic Regression (LR), Support Vector Machine (SVM) and Multilayer Perceptron (MLP) classifiers were tested. The survival of lambs in the raw dataset was 91.7 %. The highest accuracy (0.925) in classifying living or dead lambs was obtained by Boosting algorithm, while the second highest performance (accuracy of 0.897) was shown by RF. NB, LR, and SVM algorithms achieved relatively lower classification accuracies, ranging between 65 % and 67 %. According to the Boosting algorithm, birth weight was identified as the variable with the highest relative influence with 43.4 %. It was followed by birth month (12.2 %), number of ewes per shepherd (11.2 %), floor space per ewe (10.0 %), and birth rank group (7.0 %). In conclusion, Boosting algorithm demonstrated high classification accuracy in predicting lamb survival. Moreover, the strong predictive influences of birth weight, number of ewes per shepherd, floor space per ewe, and birth rank group indicate the importance of focusing on gestational nutritional management, husbandry conditions, and overall herd management practices in developing intervention strategies to reduce lamb mortality in housed management systems.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107625"},"PeriodicalIF":1.4,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145160354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study evaluated the effects of replacing soybean meal (SBM) with different levels of camelina meal (CM) on feed intake, growth performance, nutrient digestibility, ruminal fermentation, and estimated microbial nitrogen synthesis (EMNS) in fattening Grey Shirazi lambs. Thirty-two lambs (95.0 ± 10.0 days old; body weight of 28.5 ± 1.3 kg) were individually housed for 83 days. Experimental diets were Con (control, diet without CM), CM33 (diet containing 33 % DM of CM instead of SBM), CM66 (diet containing 66 % DM of CM instead of SBM) and CM100 (diet containing 100 % DM of CM instead of SBM). The DM, EE, NDFom, ADFom and ADL contents of CM were higher than in SBM and the ash, CP, NFC and ME contents were lower than those of SBM. There was a tendency for increased dry matter intake (DMI) and final BW in lambs nourished with the CM33 diet compared to the control diet (L = 0.053 and Q = 0.013 respectively). The highest values of gain and average daily gain (ADG) were observed in lambs consuming the CM33 diet (Q = 0.012 and Q = 0.0012). The 66 % CM diet enhanced feed conversion ratio (FCR) (Q = 0.041). Lambs fed the 33 % CM diet exhibited greater DM and OM digestibility than other groups (DM: L = 0.014, Q = 0.028; OM: L = 0.109, Q = 0.028). The pH, total VFA, butyrate, isobutyrate, valerate, and isovalerate levels did not differ between lambs fed SBM and different levels of CM (P > 0.05). No significant variation was detected in ruminal NH3-N production between lambs fed the CM33 or CM66 diets and those receiving the control diet. Lambs fed the 33 % CM diet showed a trend toward lower ruminal NH₃-N compared to those fed the control diet (L = 0.002, Q = 0.024). In lambs fed the 33 % CM diet, acetate concentration (C = 0.037), acetate:propionate ratio (C = 0.028), and methane production (C = 0.024) decreased, while propionate concentration increased (C = 0.022) compared to the control diet. Lambs receiving the CM33 diet exhibited a higher EMNS than those fed the control diet (Q = 0.038 and C = 0.011). Regarding SMB, CM inclusion at varying levels significantly diminished protozoal counts and subfamilies of Entodiniinae and Diplodiniinae (L < 0.0001). The population of Isotricha (L = 0.011) and the subfamily of Ophrioscolecinae (L = 0.002) decreased only in the CM100 diet compared to the control diet. This study demonstrates that CM can replace SBM up to 100 % of dietary DM in lamb diets without compromising performance, with 33 % inclusion yielding optimal improvements in efficiency and sustainability. These findings, coupled with camelina's agronomic advantages in water-limited conditions, suggest that CM represents a sustainable alternative to SBM in ruminant production systems.
{"title":"Replacement of soybean meal with camelina meal in diet of fattening lambs: Influence on feed intake, performance and ruminal fermentation parameters","authors":"Zahra Jooshakipour , Daryoush Alipour , Mohammad Javad Abarghuei , Hassan Aliarabi","doi":"10.1016/j.smallrumres.2025.107621","DOIUrl":"10.1016/j.smallrumres.2025.107621","url":null,"abstract":"<div><div>This study evaluated the effects of replacing soybean meal (SBM) with different levels of camelina meal (CM) on feed intake, growth performance, nutrient digestibility, ruminal fermentation, and estimated microbial nitrogen synthesis (EMNS) in fattening Grey Shirazi lambs. Thirty-two lambs (95.0 ± 10.0 days old; body weight of 28.5 ± 1.3 kg) were individually housed for 83 days. Experimental diets were Con (control, diet without CM), CM33 (diet containing 33 % DM of CM instead of SBM), CM66 (diet containing 66 % DM of CM instead of SBM) and CM100 (diet containing 100 % DM of CM instead of SBM). The DM, EE, NDFom, ADFom and ADL contents of CM were higher than in SBM and the ash, CP, NFC and ME contents were lower than those of SBM. There was a tendency for increased dry matter intake (DMI) and final BW in lambs nourished with the CM33 diet compared to the control diet (L = 0.053 and Q = 0.013 respectively). The highest values of gain and average daily gain (ADG) were observed in lambs consuming the CM33 diet (Q = 0.012 and Q = 0.0012). The 66 % CM diet enhanced feed conversion ratio (FCR) (Q = 0.041). Lambs fed the 33 % CM diet exhibited greater DM and OM digestibility than other groups (DM: L = 0.014, Q = 0.028; OM: L = 0.109, Q = 0.028). The pH, total VFA, butyrate, isobutyrate, valerate, and isovalerate levels did not differ between lambs fed SBM and different levels of CM (P > 0.05). No significant variation was detected in ruminal NH<sub>3</sub>-N production between lambs fed the CM33 or CM66 diets and those receiving the control diet. Lambs fed the 33 % CM diet showed a trend toward lower ruminal NH₃-N compared to those fed the control diet (L = 0.002, Q = 0.024). In lambs fed the 33 % CM diet, acetate concentration (C = 0.037), acetate:propionate ratio (C = 0.028), and methane production (C = 0.024) decreased, while propionate concentration increased (C = 0.022) compared to the control diet. Lambs receiving the CM33 diet exhibited a higher EMNS than those fed the control diet (Q = 0.038 and C = 0.011). Regarding SMB, CM inclusion at varying levels significantly diminished protozoal counts and subfamilies of <em>Entodiniinae</em> and <em>Diplodiniinae</em> (L < 0.0001). The population of <em>Isotricha</em> (L = 0.011<em>)</em> and the subfamily of <em>Ophrioscolecinae</em> (L = 0.002) decreased only in the CM100 diet compared to the control diet. This study demonstrates that CM can replace SBM up to 100 % of dietary DM in lamb diets without compromising performance, with 33 % inclusion yielding optimal improvements in efficiency and sustainability. These findings, coupled with camelina's agronomic advantages in water-limited conditions, suggest that CM represents a sustainable alternative to SBM in ruminant production systems.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107621"},"PeriodicalIF":1.4,"publicationDate":"2025-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145223258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-09-25DOI: 10.1016/j.smallrumres.2025.107622
Assemu Tesfa , Mengistie Taye , Aynalem Haile , Zerihun Nigussie , Dina Najjar , Shigdaf Mekuriaw , Suzanne van Dijk , Shimels E. Wassie , Andreas Wilkes , Dawit Solomon
This systematic review was conducted to appraise the impact of community-based sheep breeding programs in Ethiopia on animal genetic improvement, household food security, women’s empowerment, and to identify integrative climate-smart interventions. The review includes 51 documents from databases such as PubMed, AJOL, CAB Direct, Web of Science, and Google Scholar, together with grey literature and institutional reports. Community-based breeding programs (CBBP) in Ethiopia provide a participatory approach that empowers farmers by addressing the limitations of crossbreeding and nucleus breeding programs. CBBP have brought significant improvements in growth and reproductive traits, food security, and women empowerment. Compared to baseline values, the intervention resulted in a 3.63 %, 5.6 %, 7.58 %, and 7.25 % improvement in birth weight, weaning weight, six-month weight, and yearling weight, respectively. Besides, litter size was improved by 0.09, and lambing intervals and age at first lambing were reduced by 21.31 days and 75.68 days, respectively. These gains has got translated into improved household livelihoods and food security through increased income from the sale of improved animals. Since 2019, seven women-led CBBPs comprising 486 members have been established, enhancing women’s participation in small ruminant breeding. For the implementation of small ruminant breeding, including CBBPs, 16 stakeholders with 34 linkages were identified. However, apart from research centers, kebele experts, and projects such as the International Center for Agricultural Research in the Dry Areas (ICARDA), most institutions have contributed little, largely due to unclear institutional frameworks. This gap has resulted in the malfunctioning of several CBBP villages. Despite notable achievements, the program continuous to face technical, financial, and institutional challenges persist. Strengthening CBBPs through the integration of climate-smart strategies remains critical for ensuring long-term sustainability and reducing greenhouse gas emissions.
本系统综述旨在评估埃塞俄比亚以社区为基础的绵羊养殖项目对动物遗传改良、家庭粮食安全、妇女赋权的影响,并确定综合气候智慧型干预措施。该综述包括来自PubMed、AJOL、CAB Direct、Web of Science和b谷歌Scholar等数据库的51篇文献,以及灰色文献和机构报告。埃塞俄比亚的社区育种计划(CBBP)提供了一种参与性方法,通过解决杂交育种和核心育种计划的局限性,赋予农民权力。CBBP在生长和生殖特性、粮食安全和妇女赋权方面带来了重大改善。与基线值相比,干预导致出生体重、断奶体重、6个月体重和1岁体重分别改善3.63 %、5.56 %、7.58 %和7.25 %。产仔数提高0.09,产羔间隔缩短21.31 d,首羔龄缩短75.68 d。通过出售改良动物增加收入,这些收益已经转化为改善家庭生计和粮食安全。自2019年以来,已经建立了7个由女性领导的cbbp,包括486名成员,加强了女性对小反刍动物养殖的参与。为实施小型反刍动物养殖,包括cbbp,确定了16个利益相关者,有34个联系。然而,除了研究中心、kebele专家和诸如国际干旱地区农业研究中心(ICARDA)这样的项目之外,大多数机构贡献很少,这主要是由于机构框架不明确。这一差距导致了几个CBBP村庄的故障。尽管取得了显著的成就,但该计划继续面临技术、财政和体制方面的挑战。通过整合气候智能型战略来加强CBBPs对于确保长期可持续性和减少温室气体排放仍然至关重要。
{"title":"Systematic review on the impacts of community-based sheep breeding programs on animal productivity, food security, women's empowerment, and identification of interventions for climate-smart systems under the extensive production system in Ethiopia","authors":"Assemu Tesfa , Mengistie Taye , Aynalem Haile , Zerihun Nigussie , Dina Najjar , Shigdaf Mekuriaw , Suzanne van Dijk , Shimels E. Wassie , Andreas Wilkes , Dawit Solomon","doi":"10.1016/j.smallrumres.2025.107622","DOIUrl":"10.1016/j.smallrumres.2025.107622","url":null,"abstract":"<div><div>This systematic review was conducted to appraise the impact of community-based sheep breeding programs in Ethiopia on animal genetic improvement, household food security, women’s empowerment, and to identify integrative climate-smart interventions. The review includes 51 documents from databases such as PubMed, AJOL, CAB Direct, Web of Science, and Google Scholar, together with grey literature and institutional reports. Community-based breeding programs (CBBP) in Ethiopia provide a participatory approach that empowers farmers by addressing the limitations of crossbreeding and nucleus breeding programs. CBBP have brought significant improvements in growth and reproductive traits, food security, and women empowerment. Compared to baseline values, the intervention resulted in a 3.63 %, 5.6 %, 7.58 %, and 7.25 % improvement in birth weight, weaning weight, six-month weight, and yearling weight, respectively. Besides, litter size was improved by 0.09, and lambing intervals and age at first lambing were reduced by 21.31 days and 75.68 days, respectively. These gains has got translated into improved household livelihoods and food security through increased income from the sale of improved animals. Since 2019, seven women-led CBBPs comprising 486 members have been established, enhancing women’s participation in small ruminant breeding. For the implementation of small ruminant breeding, including CBBPs, 16 stakeholders with 34 linkages were identified. However, apart from research centers, kebele experts, and projects such as the International Center for Agricultural Research in the Dry Areas (ICARDA), most institutions have contributed little, largely due to unclear institutional frameworks. This gap has resulted in the malfunctioning of several CBBP villages. Despite notable achievements, the program continuous to face technical, financial, and institutional challenges persist. Strengthening CBBPs through the integration of climate-smart strategies remains critical for ensuring long-term sustainability and reducing greenhouse gas emissions.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107622"},"PeriodicalIF":1.4,"publicationDate":"2025-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145223127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Flea infestation in sheep is a significant public health concern due to their widespread distribution worldwide and the transmission of flea-borne diseases. In this study, we aimed to identify and molecularly characterize P. irritans collected from sheep, using morphological, molecular, and phylogenetic analysis. Flea samples were collected from sheep on six farms in Sivas Province, Türkiye, between April and September 2024. The flea specimens were morphologically identified using identification keys. After total genomic DNA extraction and Polymerase Chain Reactions (PCR), the PCR products were sent for sequencing. This morphological study indicated that from the 250 adult fleas collected from sheep, 223 specimens (110 female and 113 male) belonged to the human flea, Pulex irritans. Also, mt-COI gene region Blast analysis results confirmed that all samples were P. irritans. Additionally, molecular analysis revealed a high sequence similarity (99.8 %) with P. irritans isolates from Iran and Australia, which are available in GenBank. Considering the relatively high frequency of presence of this ectoparasite in the sheep, further studies focused on the possibility of being a vector of pathogens and their distribution between these animals and humans are recommended. The results of this study can be used to identify flea-borne disease risks and develop effective control measures.
{"title":"Molecular characterization and phylogenetic analysis of Pulex irritans (Siphonaptera: Pulicidae) fleas collected from sheep in Sivas Province, Türkiye","authors":"Zuhal Önder , Batuhan Aşkım Arslanhan , Sümmani Çifci","doi":"10.1016/j.smallrumres.2025.107624","DOIUrl":"10.1016/j.smallrumres.2025.107624","url":null,"abstract":"<div><div>Flea infestation in sheep is a significant public health concern due to their widespread distribution worldwide and the transmission of flea-borne diseases. In this study, we aimed to identify and molecularly characterize <em>P. irritans</em> collected from sheep, using morphological, molecular, and phylogenetic analysis. Flea samples were collected from sheep on six farms in Sivas Province, Türkiye, between April and September 2024. The flea specimens were morphologically identified using identification keys. After total genomic DNA extraction and Polymerase Chain Reactions (PCR), the PCR products were sent for sequencing. This morphological study indicated that from the 250 adult fleas collected from sheep, 223 specimens (110 female and 113 male) belonged to the human flea, <em>Pulex irritans.</em> Also<em>,</em> mt-COI gene region Blast analysis results confirmed that all samples were <em>P. irritans</em>. Additionally, molecular analysis revealed a high sequence similarity (99.8 %) with <em>P. irritans</em> isolates from Iran and Australia, which are available in GenBank. Considering the relatively high frequency of presence of this ectoparasite in the sheep, further studies focused on the possibility of being a vector of pathogens and their distribution between these animals and humans are recommended. The results of this study can be used to identify flea-borne disease risks and develop effective control measures.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"253 ","pages":"Article 107624"},"PeriodicalIF":1.4,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145160452","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-09-23DOI: 10.1016/j.smallrumres.2025.107623
Juan Alberto Quintero-Elisea , Héctor Armando Olguín-Arredondo , José Vicente Velázquez-Morales , César Cortez-Romero , Antonia Henández-Trejo , Jessica Beatriz Herrera-Ojeda , Gaspar Manuel Parra-Bracamonte
The aim of the present study was to evaluate estrous behavior and follicular development in Pelibuey ewes at different seasons of the year. One hundred and twenty ewes were synchronized with intravaginal progestogen sponges maintained for 12 days. The day 0 (day sponges were removed), the onset and interval to estrus were detected and follicular development was measured over four consecutive days. The variables evaluated were: the time of onset of estrus, interval to estrus and number of follicles. To determine the effect of the season on the response variables, a Chi-square test and an analysis of variance were performed for a randomized complete block design. The results indicate that season affected (P < 0.01) the incidence of estrus; it was the highest in autumn and winter (100 %) and lowest in spring (70 %). Season also influenced (P < 0.01) the number of small (class 1) follicles on Day 1 and the number of large (class 3) follicles on Day 3. In each case, follicle number was higher (P < 0.01) in spring compared with the other seasons. It is concluded that the estrous activity and follicular dynamics in Pelibuey sheep is manifested largely during the winter season. Furthermore, onset of estrus and follicle class number are significantly related to seasonal effects. The reproductive activity is observed in Pelibuey ewes during all the year.
{"title":"Follicular development in Pelibuey ewes in different seasons determined by ultrasonography","authors":"Juan Alberto Quintero-Elisea , Héctor Armando Olguín-Arredondo , José Vicente Velázquez-Morales , César Cortez-Romero , Antonia Henández-Trejo , Jessica Beatriz Herrera-Ojeda , Gaspar Manuel Parra-Bracamonte","doi":"10.1016/j.smallrumres.2025.107623","DOIUrl":"10.1016/j.smallrumres.2025.107623","url":null,"abstract":"<div><div>The aim of the present study was to evaluate estrous behavior and follicular development in Pelibuey ewes at different seasons of the year. One hundred and twenty ewes were synchronized with intravaginal progestogen sponges maintained for 12 days. The day 0 (day sponges were removed), the onset and interval to estrus were detected and follicular development was measured over four consecutive days. The variables evaluated were: the time of onset of estrus, interval to estrus and number of follicles. To determine the effect of the season on the response variables, a Chi-square test and an analysis of variance were performed for a randomized complete block design. The results indicate that season affected (P < 0.01) the incidence of estrus; it was the highest in autumn and winter (100 %) and lowest in spring (70 %). Season also influenced (P < 0.01) the number of small (class 1) follicles on Day 1 and the number of large (class 3) follicles on Day 3. In each case, follicle number was higher (P < 0.01) in spring compared with the other seasons. It is concluded that the estrous activity and follicular dynamics in Pelibuey sheep is manifested largely during the winter season. Furthermore, onset of estrus and follicle class number are significantly related to seasonal effects. The reproductive activity is observed in Pelibuey ewes during all the year.</div></div>","PeriodicalId":21758,"journal":{"name":"Small Ruminant Research","volume":"252 ","pages":"Article 107623"},"PeriodicalIF":1.4,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145157951","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}