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Does nitric oxide alleviate the effects of ammonium toxicity on root growth of Atlantic forest tree species? 一氧化氮是否能减轻铵毒性对大西洋森林树种根系生长的影响?
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-04-04 DOI: 10.1007/s40626-024-00313-8
R. C. Da Silva, A. C. Preisler, A. M. Dionisio, W. A. Verri, M. Gaspar, H. C. Oliveira

Nitrate and ammonium are the main sources through which plants obtain nitrogen from the soil. Nevertheless, several plant species exhibit symptoms of toxicity when grown with ammonium, including reduced root growth. As nitrite derived from nitrate is the primary pathway for nitric oxide (NO) synthesis, environments containing ammonium as the sole nitrogen source have lower concentrations of this signaling molecule. Application of NO can enhance plant tolerance to stresses. In our study, the effect of NO application on seedlings of two tree species from the Atlantic Forest with different nitrogen utilization strategies and contrasting tolerances to ammonium was evaluated. The tolerant species Cariniana estrellensis did not show a significant difference in root growth under nitrate or ammonium. However, the non-tolerant species Cecropia pachystachya showed low growth when supplied with ammonium. Malondialdehyde did not accumulate in both species, suggesting that ammonium toxicity is not related to oxidative stress. As expected, C. pachystachya roots exhibited higher concentration of NO when grown with nitrate but C. estrellensis displayed higher endogenous concentration of NO when supplied with ammonium, suggesting a predominance of NO synthesis through oxidative pathways. NO application increased root growth in C. pachystachya seedlings grown in ammonium but had no effect on C. estrellensis. Together, these results suggest that greater tolerance to ammonium may be related to higher concentrations of NO and its modulating role in anti-stress responses. Further investigation with a broader range of species is necessary to identify the mechanisms underlying ammonium tolerance and NO production.

硝酸盐和铵是植物从土壤中获取氮的主要来源。然而,有几种植物在使用铵的情况下会出现中毒症状,包括根系生长减弱。由于从硝酸盐中提取的亚硝酸盐是合成一氧化氮(NO)的主要途径,因此在以铵为唯一氮源的环境中,这种信号分子的浓度较低。施用一氧化氮可以增强植物对胁迫的耐受性。在我们的研究中,我们评估了施用一氧化氮对大西洋森林中两种树种幼苗的影响,这两种树种对氮的利用策略不同,对铵盐的耐受性也截然不同。耐受性强的树种 Cariniana estrellensis 在硝酸盐或铵盐条件下的根系生长没有明显差异。然而,不耐受铵盐的物种 Cecropia pachystachya 在铵盐供应下生长缓慢。丙二醛在这两个物种中都没有积累,这表明铵毒性与氧化应激无关。正如所预期的那样,C. pachystachya 根系在硝酸盐条件下生长时表现出更高的 NO 浓度,而 C. estrellensis 在铵盐条件下则表现出更高的 NO 内源浓度,这表明 NO 主要是通过氧化途径合成的。施用氮氧化物能增加在铵盐中生长的 C. pachystachya 幼苗的根系生长,但对 C. estrellensis 没有影响。这些结果表明,C. estrellensis 对铵盐更强的耐受性可能与较高浓度的 NO 及其在抗应激反应中的调节作用有关。有必要对更广泛的物种进行进一步研究,以确定铵耐受性和 NO 产生的机制。
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引用次数: 0
Looking for a systemic concept and physiological diagnosis of a plant stress state 寻找植物胁迫状态的系统概念和生理诊断方法
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-04-01 DOI: 10.1007/s40626-024-00318-3
Joaquim A. G. Silveira, Rachel H. V. Sousa

Plant stress state is defined here as an endogenous physiological condition associated with homeostasis disruption involving irreversible or reversible modifications. Plant biologists are facing two important problems: establishing a suitable and dynamic stress concept and devising tools to make a suitable physiological diagnosis to characterize plant stress states. We are proposing here a new concept on stress essentially focused on plant organization as self-organized and emergent systems concentrated in homeostasis disruption as impacted by endogenous and environmental feedbacks. In addition, we are proposing a simplified physiological diagnosis system to evaluate two contrasting stress states in comparison with a non-stressed condition based on progressive alterations in plant homeostasis. This proposal is focused on specific crops, presenting rice as an example. The diagnosis system assumes that homeostasis in plants is dynamic, flexible, spatio-temporal, and organized in multi-modules. The reference state involves a ground homeostasis representing a non-stress state, prior to environmental perturbations and alarm phase. The second stage of homeostatic alterations is characterized by reversible changes in plant organization induced by external factors, characterizing a slightly changed homeostasis or moderate stress state. The third stress state is characterized by strong and irreversible alterations in homeostasis, characterizing collapse in most plant modules leading to a chronic stress. The alterations in the homeostasis induced by mild stressful conditions (eustress) could also trigger different plant memory processes. We believe this systemic stress concept and diagnosis system will shed light on the improvement of stress plant physiology and their respective applications in agriculture.

植物胁迫状态在这里被定义为一种内源生理状态,与涉及不可逆或可逆改变的平衡破坏有关。植物生物学家面临着两个重要问题:建立一个合适的动态胁迫概念,以及设计出合适的生理诊断工具来描述植物的胁迫状态。我们在此提出一个新的应激概念,主要侧重于植物组织作为自组织的新兴系统,受内源和环境反馈的影响,集中于平衡破坏。此外,我们还提出了一个简化的生理诊断系统,用于评估两种不同的胁迫状态,并根据植物体内平衡的渐进变化与非胁迫状态进行比较。该建议主要针对特定作物,以水稻为例。诊断系统假定植物体内的平衡是动态的、灵活的、时空的,并且是多模块组织的。在环境扰动和警报阶段之前,参考状态包括代表非应激状态的地面稳态。稳态改变的第二阶段以外部因素引起的植物组织的可逆变化为特征,表现为稳态的轻微改变或中度应激状态。第三应激状态的特点是稳态发生强烈和不可逆的改变,大多数植物模块崩溃,导致慢性应激。轻度应激状态(缓和应激)引起的稳态改变也可能触发不同的植物记忆过程。我们相信,这一系统性胁迫概念和诊断系统将有助于改善胁迫植物生理学及其在农业中的应用。
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引用次数: 0
Eucalypt seedlings lack a clear phosphate starvation response under low phosphorus availability 桉树幼苗在低磷供应条件下缺乏明显的磷酸盐饥饿反应
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-03-22 DOI: 10.1007/s40626-024-00311-w

Abstract

In regions of low soil phosphorus (P) availability, such as many tropical and subtropical regions, the cultivation of eucalypts is common due to their adaptation to P-constrained soils. As in other trees, the molecular mechanisms underlying the phosphate starvation response (PSR) in eucalypts remain poorly understood. This study aimed to elucidate the molecular responses associated with PSR and assess the efficiency of P acquisition in five eucalypt species: Eucalyptus acmenoides, E. grandis, E. globulus, E. tereticornis, and Corymbia maculata. A greenhouse experiment was carried out in soil/substrate with low resin-extractable P (4.5 mg kg−1, Low P) and sufficient P (10.8 mg kg−1, Sufficient P) availability. After nine months growing in such conditions, various parameters were assessed, such as biomass production, P concentrations, P uptake efficiency (PUpE), and the expression of PSR-related genes. Overall, eucalypt plants exhibited a relatively weak response to low P availability, with slight variations in biomass production, P concentration, and PSR gene expression. C. maculata plants exhibited the highest PUpE under low P, while E. globulus exhibited the lowest. Among PSR-related genes, LPR1/2 in the roots of E. grandis, PDR2 in the roots of C. maculata, and phosphate transporters PHT1;6 and PHT1;8 in the roots of E. globulus, along with PHT1;12 in the roots of E. tereticornis, were induced under low P availability. Elevated PHT1 transcripts in the roots under sufficient P conditions, despite adequate leaf P concentrations, suggest potential interactions with other nutrient availability such as nitrogen, magnesium, and calcium, as well as symbiotic associations. Additionally, the upregulation SQD1 gene involved in membrane lipid remodeling in leaves of E. tereticornis, E. acmenoides, and C. maculata under low P suggests an improved P utilization efficiency. This study reveals the intricate and multifaceted nature of eucalypt responses to soil P availability. Despite the low P concentrations, eucalypt plants maintained foliar concentrations similar to those in the P-sufficient treatment suggesting a complex interplay of factors influencing PSR including nutrient balance.

摘要 在土壤磷(P)供应量较低的地区,如许多热带和亚热带地区,由于桉树对磷受限土壤的适应性,桉树的种植非常普遍。与其他树木一样,人们对桉树磷酸盐饥饿反应(PSR)的分子机制仍然知之甚少。本研究旨在阐明与磷酸盐饥饿反应相关的分子反应,并评估五种桉树获取磷酸盐的效率:E. globulus、E. tereticornis 和 Corymbia maculata。温室实验是在树脂可提取磷含量较低(4.5 毫克/千克,低磷)和磷含量充足(10.8 毫克/千克,充足磷)的土壤/基质中进行的。在这种条件下生长九个月后,对各种参数进行了评估,如生物量产量、钾浓度、钾吸收效率(PUpE)和 PSR 相关基因的表达。总体而言,桉树植物对低钾供应量的反应相对较弱,生物量产量、钾浓度和 PSR 基因表达量略有变化。在低钾条件下,C. maculata 植物表现出最高的 PUpE,而 E. globulus 表现出最低的 PUpE。在 PSR 相关基因中,大叶桉根部的 LPR1/2、大叶桉根部的 PDR2、球果桉根部的磷酸盐转运体 PHT1;6 和 PHT1;8,以及 E. tereticornis 根部的 PHT1;12,都在低 P 供应条件下被诱导。尽管叶片中的钾浓度充足,但在钾充足的条件下,根中的 PHT1 转录物升高,这表明它可能与氮、镁、钙等其他养分以及共生关系发生相互作用。此外,在低 P 条件下,E. tereticornis、E. acmenoides 和 C. maculata 叶片中参与膜脂重塑的 SQD1 基因上调,表明其对 P 的利用效率有所提高。这项研究揭示了桉树对土壤钾供应的复杂和多方面的反应。尽管钾的浓度很低,桉树植物叶片的钾浓度仍与钾充足的处理相似,这表明影响钾利用率的各种因素(包括养分平衡)之间存在着复杂的相互作用。
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引用次数: 0
Repeated water deficit events trigger adjustments in enzymatic antioxidant system in oil palm 反复缺水事件引发油棕酶抗氧化系统的调整
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-03-22 DOI: 10.1007/s40626-024-00316-5
Wagner Romulo L. Lopes Filho, Flavio Henrique S. Rodrigues, Rosane Patrícia F. Chaves, Roberto L. Cunha, Lucas C. Costa, Hugo A. Pinheiro

Plants are able to reprogram their metabolism to cope with drought stress based on previous signals of water deficit events. Recently, we reported that oil palm seedlings exposed to three water deficit cycles attenuate oxidative damage on the photosynthetic machinery when compared to those facing drought conditions for the first time. However, the mechanism underlying the photosynthetic apparatus maintenance at either single or repeated events of drought stress is not well understood. Herein, oil palm seedlings were investigated for their photosynthesis acclimation upon single (1WD) and repeated (3WD) events of drought by assessing leaf gas exchange, chlorophyll fluorescence, and biochemical variables when predawn leaf water potential of stressed plants reached about –1.7 MPa (Day 7) and 2.5 MPa (Day 28). Plants of 1WD treatment exhibited higher chlorophyll degradation, higher membrane lipid peroxidation, and lower photosystem II activity than both control and 3WD plants. In contrast, 3WD plants exhibited low hydrogen peroxide coupled with upregulation of the enzymatic antioxidant system. The outcomes suggest that the acclimation of oil palm plants to repetitive water deficit events is related to the adjustments in antioxidant enzyme activities to attenuate oxidative damage to the photosynthetic machinery.

植物能够根据之前的缺水事件信号重新规划新陈代谢,以应对干旱胁迫。最近,我们报告说,与首次面临干旱条件的油棕幼苗相比,暴露于三个缺水周期的油棕幼苗减轻了光合机械的氧化损伤。然而,人们对单次或多次干旱胁迫下光合装置的维持机制还不甚了解。本文研究了油棕幼苗在单次(1WD)和多次(3WD)干旱事件中的光合作用适应性,方法是在受胁迫植株黎明前叶片水势达到约-1.7 MPa(第7天)和2.5 MPa(第28天)时评估叶片气体交换、叶绿素荧光和生化变量。与对照和 3WD 植物相比,1WD 处理的植物表现出更高的叶绿素降解度、更高的膜脂过氧化度和更低的光系统 II 活性。相比之下,3WD 植物的过氧化氢含量较低,同时酶抗氧化系统上调。研究结果表明,油棕植物对反复缺水事件的适应与抗氧化酶活性的调整有关,以减轻对光合机械的氧化损伤。
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引用次数: 0
Soil seed banks, persistence and recruitment: memories of a partially non-lived life? 土壤种子库、持久性和新陈代谢:部分非生命的记忆?
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-03-20 DOI: 10.1007/s40626-024-00319-2

Abstract

The soil seed banks are composed of seeds from distinct origins and species, including dormant and non-dormant ones. Seed banks were formed by seeds dispersed from parent plants receiving from them important information regarding the environment. The dormant seeds, especially with physiological dormancy, can persist in these banks longer than non-dormant seeds. As long as they persist, it is possible to access memories from the timing of formation and persistence in the soil seed banks. However, besides the physiological dormancy is a natural trait that assures seed germination and seedling recruitment when the environmental conditions are favorable, some practical implications can be discussed. Here I bring a perspective of how the memories of the seeds in the soil seed banks, mainly regarding dormant seeds, can help predict intraspecific variability (i.e., epigenetics) losses and what can be done to slow down this negative effect among species. Each seed is a source of genetic and memory of the time that the seed was formed in the mother plant and the timing of the permanency in the soil seed bank, therefore, each seed of each species counts for restauration efforts. This knowledge is crucial for avoiding directional selection when non-dormant and quick-germinating seeds are selected for recovering areas. Moreover, it is imperative to keep untouched areas where the soil seed banks indeed represent the structure of the reference population.

摘要 土壤种子库由不同来源和物种的种子组成,包括休眠和非休眠种子。种子库是由母本植物散播的种子形成的,它们从母本植物那里获得了有关环境的重要信息。与非休眠种子相比,休眠种子(尤其是生理休眠种子)在这些种子库中的存活时间更长。只要这些种子还存在,就有可能从土壤种子库的形成和存在时间中获得记忆。不过,除了生理休眠是一种自然特性,能在环境条件有利时确保种子萌发和幼苗出土外,还可以讨论一些实际意义。在此,我将从一个角度来探讨土壤种子库中种子的记忆(主要是休眠种子的记忆)如何有助于预测种内变异(即表观遗传学)的损失,以及如何减缓物种间的这种负面影响。每一粒种子都是遗传和记忆的源泉,记录了种子在母株中形成的时间以及在土壤种子库中永久存在的时间,因此,每个物种的每一粒种子都对恢复工作至关重要。当在恢复地区选择非休眠和快速发芽的种子时,这一知识对于避免定向选择至关重要。此外,必须保留土壤种子库确实代表参考种群结构的未开发地区。
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引用次数: 0
Stress memory in crops: what we have learned so far 农作物的压力记忆:我们目前的收获
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-03-13 DOI: 10.1007/s40626-024-00315-6
Maria D. Pissolato, Tamires S. Martins, Yutcelia C. G. Fajardo, Gustavo M. Souza, Eduardo C. Machado, Rafael V. Ribeiro

Abiotic stresses are among the primary environmental variables that have consistently posed challenges to agricultural production worldwide. In the last decades, our understanding of how plants sense environmental cues has greatly expanded. This encompasses the mechanisms that convert environmental stress signals into cellular signaling pathways and gene transcription networks. Moreover, emerging evidence indicates that plants have the capacity to retain memories of past stressful experiences and use such capacity to enhance their responses under recurrent stresses. Priming, through prior exposure to a triggering factor, improves plant tolerance to subsequent biotic or abiotic stresses and has been proposed as the basis for plant stress memory. Priming-induced stress memory can persist in the current generation or even in the progeny. The significance of stress memory in enhancing abiotic stress tolerance is well-established in several important crops, and the capacity of plants to retain stress-related memories has been linked to diverse plant mechanisms. In this review, we revisit the recent literature reporting the mechanistic underpinnings of abiotic stress memory in important crops. We outline the underlying processes related to acquisition of stress memory, occurring at molecular, physiological, biochemical, and morphological levels. Here, we addressed the methods for studying plant memory over the last ten years, giving special attention to growth conditions, phenological stages and the techniques for inducing crop memory. Enhancing our comprehension of stress memory-related mechanisms would open up a range of possibilities for developing stress-resistant genotypes through molecular breeding or biotechnological methods or even stress-resistant crop fields due to improved management practices.

非生物胁迫是一直对全球农业生产构成挑战的主要环境变量之一。在过去几十年中,我们对植物如何感知环境线索的认识有了很大的提高。这包括将环境胁迫信号转化为细胞信号通路和基因转录网络的机制。此外,新出现的证据表明,植物有能力保留对过去胁迫经历的记忆,并利用这种能力来增强它们在反复胁迫下的反应。通过事先暴露于触发因子,"诱导"(Priming)可提高植物对后续生物或非生物胁迫的耐受性,因此被认为是植物胁迫记忆的基础。引物诱导的胁迫记忆可在当前一代甚至后代中持续存在。胁迫记忆在增强非生物胁迫耐受性方面的重要性已在几种重要作物中得到证实,植物保留胁迫相关记忆的能力与多种植物机制有关。在本综述中,我们重温了近期报道重要作物非生物胁迫记忆机理基础的文献。我们概述了与获得胁迫记忆有关的基本过程,这些过程发生在分子、生理、生化和形态学层面。在此,我们讨论了过去十年中研究植物记忆的方法,特别关注生长条件、物候期和诱导作物记忆的技术。加强我们对胁迫记忆相关机制的理解,将为通过分子育种或生物技术方法开发抗胁迫基因型,甚至通过改进管理方法开发抗胁迫作物田提供一系列可能性。
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引用次数: 0
Synergistic effects of leaf nitrogen and phosphorus on photosynthetic capacity in subtropical forest 叶片氮和磷对亚热带森林光合作用能力的协同效应
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-02-29 DOI: 10.1007/s40626-024-00310-x
Longkang Ni, Daxing Gu, Jiashuang Qin, Wen He, Kechao Huang, Dennis Otieno

The photosynthetic capacity is contingent upon the balance between nitrogen (N) and phosphorus (P) concentration, as well as environmental factors. Ensuring a balanced and timely supply of nitrogen and phosphorus facilitated healthy leaf growth and sustained efficient photosynthetic activity during trees active growth phases. However, the effects of the interactions between these factors on photosynthesis, particularly in the unique context of karst ecosystems, remain unclear. To address this, we conducted an assessment of photosynthetic parameters, including the 25 ℃ maximum carboxylation rate (Vcmax,25) and the 25 ℃ maximum electron transport rate (Jmax,25), and chemical traits of leaves (leaf N, leaf P, and N:P ratio) in nine locally dominant species across both subtropical non-karst and karst areas in southwestern China. Our findings revealed that concentrations of leaf phosphorus and soil phosphorus were significantly higher in karst areas compared to non-karst areas. Additionally, the Vcmax,25 of both karst and non-karst species were synergistically affected by leaf N and P concentrations, rather than being constrained by least available nutrient. Specifically, Vcmax,25 of karst species was strongly related to leaf P, and increasing leaf N substantially increased the sensitivity of Vcmax,25 to leaf P, highlighting the importance of maintaining a balance between N and P concentrations. These insights substantially enhance the understanding of photosynthetic dynamics and resource management in diverse ecosystems, providing a solid foundation for further research and conservation strategies.

光合作用能力取决于氮(N)和磷(P)浓度之间的平衡以及环境因素。确保氮和磷的平衡和及时供应有利于叶片的健康生长,并在树木的活跃生长阶段维持高效的光合作用。然而,这些因素之间的相互作用对光合作用的影响,尤其是在喀斯特生态系统的独特环境中,仍不清楚。针对这一问题,我们对中国西南地区亚热带非喀斯特地区和喀斯特地区的九种地方优势树种进行了光合作用参数评估,包括25 ℃最大羧化速率(Vcmax,25)和25 ℃最大电子传输速率(Jmax,25),以及叶片的化学性状(叶片氮、叶片磷和氮磷比)。我们的研究结果表明,与非喀斯特地区相比,喀斯特地区的叶磷和土壤磷浓度明显较高。此外,喀斯特和非喀斯特物种的Vcmax,25受叶片氮和磷浓度的协同影响,而不是受最少可利用养分的制约。具体而言,喀斯特物种的 Vcmax,25 与叶片磷密切相关,增加叶片氮可大幅提高 Vcmax,25 对叶片磷的敏感性,这突出了保持氮和磷浓度平衡的重要性。这些见解大大加深了人们对不同生态系统中光合作用动态和资源管理的理解,为进一步的研究和保护策略提供了坚实的基础。
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引用次数: 0
Enigmas of senescence: a reappraisal on the hormonal crosstalk and the molecular mechanisms 衰老之谜:重新评估荷尔蒙串联和分子机制
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-02-26 DOI: 10.1007/s40626-024-00308-5

Abstract

Due to the already strained and severely challenged agricultural ecosystems of the modern world, predicted changes in life cycle of plants, including leaf senescence are receiving significant attention from stakeholders. The onset, progression and terminal phases of leaf senescence are greatly influenced by plant hormones. The senescence of leaves is accelerated by ethylene, jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), brassinosteroids and strigolactones (SLs), whereas it is postponed by cytokinins (CKs), gibberellic acid (GA) and auxins. The crosstalk and signal transduction pathways between these growth regulators have been found to regulate leaf senescence by orchestrating various developmental and environmental factors. Premature leaf senescence lessens the plant’s nutritional capacity and shortens the vegetative production schedule, prompting an early transition from the vegetative to the reproductive stage and diminishing crop potential. As a result, a complete understanding of leaf senescence and finding novel ways to delay it is crucial for agricultural productivity. The ability to manipulate leaf senescence for agricultural enhancement has been made possible by significant advances in physiological and molecular awareness of leaf senescence. Although studies pertaining to leaf senescence have been given steadily more attention, there are still numerous challenges that need to be resolved. In this perspective, this review focuses on current advances in understanding the leaf senescence by molecular and genetic analyses with an emphasis on hormonal regulation of leaf senescence. We also hypothesize future research to better comprehend leaf senescence by employing various current technologies.

摘要 由于现代世界的农业生态系统已经十分紧张并受到严重挑战,包括叶片衰老在内的植物生命周期的预测变化正受到利益相关者的极大关注。叶片衰老的开始、进行和结束阶段在很大程度上受植物激素的影响。乙烯、茉莉酸 (JA)、水杨酸 (SA)、脱落酸 (ABA)、铜固醇和糙叶内酯 (SLs) 会加速叶片的衰老,而细胞分裂素 (CKs)、赤霉素 (GA) 和辅酶则会延缓叶片的衰老。研究发现,这些生长调节因子之间的相互影响和信号转导途径可通过协调各种发育和环境因素来调节叶片衰老。叶片过早衰老会降低植物的营养能力,缩短无性生产期,促使植物提前从无性阶段过渡到生殖阶段,降低作物的生长潜力。因此,全面了解叶片衰老并找到延缓衰老的新方法对农业生产至关重要。由于对叶片衰老的生理和分子认识取得了重大进展,操纵叶片衰老以提高农业产量的能力已成为可能。尽管有关叶片衰老的研究越来越受到重视,但仍有许多挑战需要解决。从这一角度出发,本综述侧重于通过分子和遗传分析了解叶片衰老的当前进展,重点是叶片衰老的激素调控。我们还对未来的研究提出了假设,希望利用当前的各种技术更好地理解叶片衰老。
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引用次数: 0
Genes of carotenoid biosynthesis pathway in the moss Hylocomium splendens: identification and differential expression during abiotic stresses 芨芨草苔中类胡萝卜素生物合成途径的基因:识别和在非生物胁迫下的差异表达
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-02-23 DOI: 10.1007/s40626-024-00309-4
Albina G. Renkova, Milana V. Koulintchenko, Anastasia B. Mazina, Ilya Y. Leksin, Farida V. Minibayeva

A promising approach to solve the problem of tolerance of plants in hostile environments is to focus of stress tolerance mechanisms of extremophilic plants, in particular mosses. Along with the universal stress mechanisms, bryophytes exhibit a unique spectrum of secondary metabolites such as carotenoids, a lipophilic metabolite derived from the isoprenoid pathway. The main representatives of carotenoids in mosses are α- and β-carotene, lutein, neo-, viola- and zeaxanthins. Hylocomium splendens is one of the most common and widespread mosses of Northern Hemisphere. The genome of this moss has not been sequenced, and the carotenoid biosynthesis pathway (CBP) genes of this species have not been reported to date. This is the first report to of an attempt to identify and characterize the CBP genes in H. splendens. As a result of cloning, sequencing, and in silico analysis, we identified and characterized ten CBP genes in H. splendens with a full ORF, and prediction of subcellular localization suggests chloroplast localization of CBP proteins. Using multiple alignments and phylogenetic and homology analyses, we demonstrated that the CBP genes of H. splendens share high similarity with the sequences in other bryophytes. Differential expression of CBP transcripts during abiotic stresses was more evident for genes in the middle and downstream steps of CBP. This work provides information on the molecular genetics of CBP in extremophilic bryophytes. Analysis of CBP genes can help to unravel the genetic evolution of carotenoid biosynthesis in plants.

要解决植物在恶劣环境中的耐受性问题,一种很有前景的方法是重点研究嗜极植物(尤其是苔藓植物)的抗逆机制。除了普遍的胁迫机制外,苔藓植物还表现出独特的次生代谢物谱系,如类胡萝卜素,这是一种从异戊烯类途径中提取的亲脂代谢物。苔藓中类胡萝卜素的主要代表是α-和β-胡萝卜素、叶黄素、新黄素、中黄素和玉米黄素。Hylocomium splendens 是北半球最常见和分布最广的苔藓之一。该苔藓的基因组尚未测序,其类胡萝卜素生物合成途径(CBP)基因迄今也未见报道。这是第一份关于白芨CBP基因鉴定和特征描述的报告。通过克隆、测序和硅学分析,我们鉴定并描述了白芨中十个具有完整 ORF 的 CBP 基因,亚细胞定位预测表明 CBP 蛋白具有叶绿体定位功能。通过多重比对、系统发育和同源性分析,我们证明白芨的 CBP 基因与其他骨干植物的序列具有高度相似性。CBP转录本在非生物胁迫下的差异表达在CBP中下游步骤的基因中更为明显。这项工作提供了嗜极真菌CBP分子遗传学方面的信息。对CBP基因的分析有助于揭示植物类胡萝卜素生物合成的遗传进化过程。
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引用次数: 0
The quest for time in plant physiology: a processual perspective 植物生理学中的时间探索:过程视角
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2024-02-13 DOI: 10.1007/s40626-024-00307-6

Abstract

We commence our discussion by asserting that Plant Physiology is fundamentally focused on comprehending the evolutionary and adaptive processes of plants over time. Despite its intuitive association with the temporal dimension, the field has traditionally been underpinned by methods that largely overlook the temporal element. Even in this era of advanced scientific techniques, many studies in plant science continue to employ methods that are essentially “timeless”. Therefore, our comprehension of plant processes “across time” tends to be fragmented. Instead of observing a continuous, real-time progression, we aggregate averaged measurements from various samples collected at discrete time points. This approach provides insights into the temporal aspects of biological processes, analogous to snapshots extracted from a movie, but it falls short of capturing the full dynamism of these processes. The understanding of these temporal aspects holds paramount significance in the realm of plant biology, as plants, by their inherent nature, represent intricate systems. Consequently, the concept of time assumes pivotal importance, and the present article elucidates a spectrum of philosophical perspectives and scientific interpretations of time. Comprehending the diverse facets of time is indispensable within the domain of plant physiology. It serves as a gateway to a more comprehensive and dynamic exploration of plant processes. This amalgamation of philosophy and science enables us to perceive plant biology as a continuum of processes unfolding over time, accentuating the interconnectedness of internal and external events. In this context, we assert that Processual Philosophy provides a suitable and reliable foundation for the development of Plant Physiology as a science dedicated to the temporal dimensions of plant life.

摘要 我们在开始讨论时指出,植物生理学的根本重点是理解植物随着时间的推移而发生的进化和适应过程。尽管植物生理学与时间维度有着直观的联系,但该领域传统上采用的方法在很大程度上忽略了时间因素。即使在科学技术如此发达的今天,植物科学领域的许多研究仍然采用本质上 "永恒 "的方法。因此,我们对 "跨越时间 "的植物过程的理解往往是支离破碎的。我们不是观察连续、实时的进展,而是汇总在离散时间点收集的各种样本的平均测量值。这种方法可以让我们深入了解生物过程的时间方面,类似于从电影中提取的快照,但却无法捕捉到这些过程的全部动态。对这些时间方面的理解在植物生物学领域具有极其重要的意义,因为植物就其固有性质而言,代表着错综复杂的系统。因此,时间的概念具有举足轻重的意义,本文阐述了时间的哲学观点和科学解释。在植物生理学领域,理解时间的不同方面是不可或缺的。它是通往更全面、更动态地探索植物过程的大门。这种哲学与科学的结合使我们能够将植物生物学视为一个随着时间推移而展开的连续过程,突出了内部和外部事件的相互关联性。在这种情况下,我们认为过程哲学为植物生理学的发展提供了一个合适而可靠的基础,使其成为一门致力于研究植物生命时间维度的科学。
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Theoretical and Experimental Plant Physiology
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