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The Janzen-Connell hypothesis and seed masting. 简森-康奈尔假说和种子培育。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-10-18 DOI: 10.1016/j.tree.2025.09.021
T Jonathan Davies, Janneke Hille Ris Lambers, E M Wolkovich

The Janzen-Connell hypothesis (JC effect) has been proposed as a mechanism for explaining high tropical tree diversity via negative conspecific density dependence imposed by natural enemies. Seed masting describes the uneven investment in reproduction between years, and could be a mechanism for reducing seed predation by means of predator satiation. JC effects select for wider dispersal kernels, allowing species to escape enemies in space, while the predator-satiation model of seed masting assumes escape from predators in time. Although representing contrasting ecological dynamics, both models are predicated on similar assumptions: that tree recruitment is limited by seed mortality via natural enemies. We suggest that the individual fitness advantages of masting and JC dynamics would be better understood by considering both mechanisms together.

Janzen-Connell假说(JC效应)被提出解释天敌施加的负同种密度依赖性对热带树木多样性的影响。种子密集描述了不同年份之间对繁殖的不平衡投资,可能是通过捕食者满足来减少种子捕食的一种机制。JC效应选择更宽的扩散核,允许物种在空间上逃离敌人,而种子积累的捕食者-满足模型假设从捕食者的时间逃脱。尽管代表了截然不同的生态动态,但两种模型都基于类似的假设:树木的补充受到天敌造成的种子死亡率的限制。我们认为,如果将这两种机制结合起来考虑,将更好地理解掌握和JC动力学的个体适应度优势。
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引用次数: 0
Expansion of conservation areas should be informed by sectoral interlinkages. 扩大保护区应考虑到部门间的相互联系。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-11 DOI: 10.1016/j.tree.2025.09.013
Martin Jung, Marta Coll, Anna Metaxas, Stephanie Margarete Thomas, Kazuaki Tsuchiya, Bruno Meirelles de Oliveira, Alexander Popp, Mark Rounsevell

In the context of nature conservation, a nexus can be defined as the interlinkages of biodiversity in protected and conserved areas with food, water, health, or climate. Evidence of nature conservation expansion scenarios suggest that such interlinkages are ubiquitous across management types, realms, and scales. Ignoring these interlinkages, including synergies, co-benefits, leakages, and trade-offs, can reduce the effectiveness and cross-sectoral benefits of future protected and conserved area expansions. Integrated planning that is inclusive of different value and knowledge systems can help to bridge disciplines and mitigate severe trade-offs impacting effectiveness of these areas. To enable appropriate expansion of protected and conserved areas to 30% of land and sea by 2030, identifying and including such interlinkages in spatial planning is essential.

在自然保护的背景下,联系可以定义为受保护和保护区的生物多样性与食物、水、健康或气候的相互联系。自然保护扩展情景的证据表明,这种相互联系在管理类型、领域和规模上普遍存在。忽视这些相互联系,包括协同效应、共同效益、泄漏和权衡,可能会降低未来保护区和保护区扩张的有效性和跨部门效益。包含不同价值和知识系统的综合规划可以帮助连接学科,减轻影响这些领域有效性的严重权衡。为了在2030年之前将保护区适当扩大到30%的陆地和海洋,确定并将这种相互联系纳入空间规划至关重要。
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引用次数: 0
Project Psyche: reference genomes for all Lepidoptera in Europe. 普赛克计划:欧洲所有鳞翅目的参考基因组。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-26 DOI: 10.1016/j.tree.2025.10.007
Charlotte J Wright, Niklas Wahlberg, Roger Vila, Marko Mutanen, Pável Matos-Maraví, Kay Lucek, Irena Kleckova, Leonardo Dapporto, Vlad Dincă, Claudia Bruschini, Christopher W Wheat, Marta Vila, Laura Torrado-Blanco, Valentina Todisco, Michal Rindos, Petr Nguyen, Peter O Mulhair, Stefaniya Kamenova, Marcus Hicks, Marianne Espeland, Ines A Drinnenberg, Mónica Doblas-Bajo, Richard I Bailey, Mark Blaxter, Joana I Meier

Project Psyche is a transnational initiative to generate and study chromosome-level reference genomes of all ~11 000 species of Lepidoptera (butterflies and moths) found in Europe. Here, we describe the decentralised network of collection and sequencing hubs that has enabled rapid progress, the standardised protocols for sampling and sequencing, and the collaborative framework for data analysis. With over 1000 species already sequenced, Lepidoptera are at the forefront of biodiversity genomics with the most reference genomes of any eukaryotic order. The completed pan-European catalogue of openly accessible lepidopteran genomes will transform our understanding of evolution and ecology, inform conservation, and foster advances in management of pests and invasive species. We highlight research areas that will benefit from this large-scale genome dataset.

Psyche项目是一项跨国倡议,旨在生成和研究在欧洲发现的所有约11000种鳞翅目(蝴蝶和飞蛾)的染色体水平参考基因组。在这里,我们描述了使快速进展成为可能的分散的收集和测序中心网络,采样和测序的标准化协议,以及数据分析的协作框架。鳞翅目已经测序了超过1000个物种,是生物多样性基因组学的前沿,拥有真核生物中最多的参考基因组。完成的开放获取鳞翅目基因组的泛欧目录将改变我们对进化和生态学的理解,为保护提供信息,并促进害虫和入侵物种管理的进展。我们强调将受益于这个大规模基因组数据集的研究领域。
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引用次数: 0
Disability in ecology and evolution. 生态和进化中的残疾。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-30 DOI: 10.1016/j.tree.2025.10.008
Jamin Ali, Chelsea Clifford, Jes Rust, Skylar R Bayer, Katie Davis
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引用次数: 0
Evolutionary influences of sexual signalling on protective colouration. 性信号对保护性着色的进化影响。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-28 DOI: 10.1016/j.tree.2025.11.002
J Benito Wainwright, Graeme D Ruxton, Nathan W Bailey

Sexual signals can reduce survival, constraining their evolutionary elaboration. However, it is unclear whether these signals, once evolved, similarly impact the evolution of naturally selected adaptations. We argue that this dynamic could be important for protective colouration, an extensively studied suite of adaptations that can also be under sexual selection. Sexual signals sometimes coevolve positively with conspicuous warning colouration, promoting synergistic, dual-function associations. However, when coupled through shared structures or behaviours, sexual traits might constrain the evolution of concealment strategies, resulting in suboptimal camouflage. We suggest hypotheses, approaches, and study systems to distinguish these opposing causal roles of sexual selection in shaping naturally selected adaptations such as protective colouration.

性信号会降低它们的存活率,限制它们进化的精细程度。然而,目前尚不清楚这些信号,一旦进化,是否同样影响自然选择适应的进化。我们认为这种动态可能对保护性着色很重要,保护性着色是一套广泛研究的适应性,也可以在性选择下进行。性信号有时与明显的警告色共同进化,促进协同,双重功能关联。然而,当通过共享的结构或行为结合在一起时,性特征可能会限制隐藏策略的进化,导致次优伪装。我们提出假设、方法和研究系统,以区分性选择在形成自然选择适应(如保护性着色)中的这些相反的因果作用。
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引用次数: 0
Forecasting extinction risk for future-proof conservation decisions. 预测灭绝风险,为未来的保护决策提供依据。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-26 DOI: 10.1016/j.tree.2025.10.014
Marcel Cardillo, Ben C Scheele, Ayesha I T Tulloch

Conservation prioritisation emphasises currently threatened species, but there are strong arguments for complementary, more proactive approaches based on forecasting future extinction risk for unthreatened species. Forecasting methods vary in the timescale of extinction risk estimation and include established methods such as Population Viability Analysis (PVA) and Early Warning Systems, and emerging 'Over-the-Horizon' (OTH) methods. We develop a framework that integrates extinction risk assessment across timescales and outlines tradeoffs between shorter- and longer-term extinction prevention goals. This framework facilitates use of extinction risk forecasting in decision-theoretic conservation prioritisation that explicitly considers alternative time horizons for extinction prevention. Considering extinction risk on extended timescales offers a future-proof approach to conservation planning that may prevent more extinctions than focusing exclusively on currently threatened species.

保护优先强调当前受威胁的物种,但是基于预测未来未受威胁物种灭绝风险的补充、更积极的方法也有强有力的论据。预测方法在灭绝风险估计的时间尺度上各不相同,包括已建立的方法,如种群生存力分析(PVA)和早期预警系统,以及新兴的“超视距”(OTH)方法。我们开发了一个框架,整合了跨时间尺度的灭绝风险评估,并概述了短期和长期灭绝预防目标之间的权衡。该框架有助于在决策理论保护优先级中使用灭绝风险预测,明确考虑防止灭绝的替代时间范围。在更长的时间尺度上考虑灭绝风险,为保护规划提供了一种面向未来的方法,这种方法可能会防止更多的灭绝,而不是只关注当前受威胁的物种。
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引用次数: 0
Determining the age of clonal plants: challenges and prospects. 克隆植物年龄的确定:挑战与展望。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-19 DOI: 10.1016/j.tree.2025.10.010
Jitka Klimešová, Patrik Mráz, Beata Oborny, Timothy Harris, Gabriela Santos da Silva, Alexandre Ferraro, Jiří Doležal, Mathieu Millan

Determining the age of genetic individuals in clonal plants is fundamental for understanding their persistence strategies, but is inherently challenging due to the gradual loss of older parts as the clone expands. The first step in age estimation is to assign physically independent individuals (ramets) to genetic individuals (genets) by molecular methods. Once this is established, the size and rate of lateral spread (LS) of the genet can be measured or estimated using morphological traits. More recently, classical or somatic molecular clocks, using genomic data, have been proposed. In this review, we examine the methodological principles and limitations of both morphological and genomic approaches, and propose a conceptual framework that integrates these methods to enable more robust and reliable age estimations of clonal plants.

确定克隆植物中遗传个体的年龄是了解其持久性策略的基础,但由于随着克隆的扩展,较老的部分会逐渐丢失,因此具有固有的挑战性。年龄估计的第一步是通过分子方法将生理上独立的个体(帧)分配给遗传个体(基因)。一旦确定了这一点,就可以利用形态特征来测量或估计基因的大小和横向传播速率。最近,使用基因组数据的经典分子钟或体细胞分子钟被提出。在这篇综述中,我们研究了形态学和基因组学方法的方法学原理和局限性,并提出了一个概念框架,将这些方法整合在一起,以实现更稳健和可靠的克隆植物年龄估计。
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引用次数: 0
Invasive species eradication standards. 入侵物种根除标准。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-01 Epub Date: 2025-09-20 DOI: 10.1016/j.tree.2025.09.002
James C Russell

Invasive species management traditionally distinguishes states of eradication from suppression but an intermediary 'elimination' also exists. Whereas eradication is removal of both residents and reinvaders, elimination removes residents but non-breeding reinvaders remain. By contrast, suppression is only a reduction in the number of residents and does not distinguish reinvaders.

入侵物种管理传统上区分根除和抑制状态,但也存在中间的“消除”。根除是去除原有物种和再入侵者,而消灭是去除原有物种,但保留非繁殖性再入侵者。相比之下,镇压只是减少居民的数量,并不区分再入侵者。
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引用次数: 0
'Venom' - a manipulative weapon for overcoming the victim's protective barriers. “毒液”——一种克服受害者保护屏障的操纵性武器。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-01 Epub Date: 2025-09-22 DOI: 10.1016/j.tree.2025.09.011
Volker Herzig
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引用次数: 0
Species roles and key interactions in vertebrate scavenger communities. 脊椎动物食腐动物群落中的物种角色和关键相互作用。
IF 17.3 1区 生物学 Q1 ECOLOGY Pub Date : 2025-11-01 Epub Date: 2025-08-25 DOI: 10.1016/j.tree.2025.07.013
Akino Inagaki, Maximilian L Allen, Esther Sebastián-González, Shinsuke Koike

In scavenging assemblages, the functional traits of scavengers that impact the structure and function of ecological communities are becoming clearer. However, there are multiple terms for influential scavenger species that lack established definitions. As such, we propose a standardized terminology encompassing five functional roles: frequent scavenger, main biomass consumer, and keystone scavenger, as well as apex scavenger and mesoscavenger (defined through ecological roles and hierarchical positions). Furthermore, we identify and describe five key behaviors, and its actors related to competitive and facilitative interactions among scavengers - signaling scavenger, carrion broker, dominant scavenger, carcass cacher, and carrion transporter - which drive species' roles. We unify concepts of scavenger roles to facilitate comparisons among studies on scavenging.

在食腐动物群落中,影响生态群落结构和功能的食腐动物功能特征日益清晰。然而,有许多缺乏既定定义的有影响力的食腐动物种类的术语。因此,我们提出了一个包含五个功能角色的标准化术语:频繁清道夫、主要生物质消费者、基石清道夫、顶端清道夫和中清道夫(通过生态角色和等级位置来定义)。此外,我们确定并描述了与食腐动物之间的竞争和促进相互作用相关的五种关键行为及其参与者——信号清道夫、腐肉中间人、优势清道夫、尸体捕食者和腐肉转运者——这些行为驱动着物种的角色。我们统一了清道夫角色的概念,以便于清道夫研究之间的比较。
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Trends in ecology & evolution
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