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Artificial intelligence and network pharmacology reveal the medication rules of Professor Wang Yu-Ying in the treatment of climacteric syndrome 人工智能与网络药理学揭示王玉英教授治疗更年期综合征的用药规律
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2311-8571.382287
Yu-Ying Wang, Yi Lu, Mengqui Hu, Tian-Xing Yi, Qi-Rui Liu, Xin-Yu Zhang, Ai-ping Chen
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引用次数: 0
Comprehensive analysis of the molecular mechanism for gastric cancer based on competitive endogenous RNA network 基于竞争性内源性RNA网络的癌症分子机制综合分析
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2311-8571.355010
Hongxuan Wu, Weichang Dai, Libo Wang, Jie Zhang, Chenglong Wang
Objective: To explore the regulatory mechanism of competitive endogenous RNAs (ceRNA) in gastric cancer (GC) and to predict the prognosis of GC. Materials and Methods: Expression profiles of long noncoding RNAs (lncRNAs), microRNAs (miRNAs), and mRNAs were obtained from The Cancer Genome Atlas platform. Differentially expressed RNAs (DERNAs) were screened to construct a lncRNA-miRNA-mRNA ceRNA network. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses were performed on the ceRNA network-related differentially expressed mRNAs (DEmRNAs). Next, the DERNAs were subjected to Cox regression and survival analyses to identify crucial prognostic factors for patients with GC. Results: We detected 1029 differentially expressed lncRNAs, 104 differentially expressed miRNAs, and 1659 DEmRNAs in patients with GC. Next, we performed bioinformatic analysis to construct the lncRNA-miRNA-mRNA ceRNA network, which included 10 miRNAs, 65 lncRNAs, and 10 mRNAs. Subsequently, KaplanMeier (K-M) analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group, and the area under the curve value of the receiver operating characteristic curve revealed that the polygenic model had good predictive ability. The results indicated that ADAMTS9-AS1, ATAD2, and CADM2 might be potential therapeutic targets and prognostic biomarkers for GC. Conclusions: Our study has implications for predicting prognosis and monitoring surveillance of GC and provides a new theoretical and experimental basis for the clinical prognosis of GC.
目的:探讨竞争性内源性RNA(ceRNA)在癌症(GC)中的调控机制,预测GC的预后。材料和方法:从癌症基因组图谱平台获得长非编码RNA(lncRNA)、微小RNA(miRNA)和mRNA的表达谱。筛选差异表达RNA(DERNAs)构建lncRNA-miRNA-mRNA-ceRNA网络。基因本体论和京都基因和基因组百科全书对ceRNA网络相关的差异表达mRNA(DEmRNAs)进行了分析。接下来,对DERNAs进行Cox回归和生存率分析,以确定GC患者的关键预后因素。结果:我们在GC患者中检测到1029个差异表达的lncRNA、104个差异表达miRNA和1659个DEmRNA。接下来,我们进行生物信息学分析,构建lncRNA-miRNA-mRNA-ceRNA网络,该网络包括10个miRNA、65个lncRNA和10个mRNA。随后,KaplanMeier(K-M)分析显示,高风险组的生存率明显低于低风险组,受试者操作特征曲线的曲线下面积值表明多基因模型具有良好的预测能力。结果表明,ADAMTS9-AS1、ATAD2和CADM2可能是GC的潜在治疗靶点和预后生物标志物。结论:本研究对胃癌的预后预测和监测具有重要意义,为胃癌的临床预后提供了新的理论和实验依据。
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引用次数: 0
Network pharmacology of xian-lian-jie-du decoction in ameliorating colorectal cancer 仙连解毒汤改善结直肠癌的网络药理学研究
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2311-8571.382074
Yang Sun, Hai-Bo Cheng, W-F Lv, Mingfen Zhao, C. Song, Qin-Chang Zhang, Hao-Jie Du, Shu-Qiong Zhang, Yu Shen
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引用次数: 0
Jujuboside a improved energy metabolism in senescent H9c2 cells injured by ischemia, hypoxia, and reperfusion through the CD38/Silent mating type information regulation 2 homolog 3 signaling pathway 红枣苷通过CD38/沉默交配型信息调控2同源信号通路改善缺血、缺氧、再灌注损伤的衰老H9c2细胞的能量代谢
3区 医学 Q2 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2311-8571.372731
Hua Zhou, Yi-Ran Hu, Hui-Yan Qu, Jia-Ying Guo, Tao Yang
Objective: This study explored the myocardial protection role of Jujuboside A through an ischemia–hypoxia–reperfusion (IHR) model. Materials and Methods: H9c2 cells were induced by D-galactose (D-gal) and IHR to establish an aging and IHR model. There are four groups of experiments: Control, IHR, D-gal + IHR, and D-gal + IHR + Jujuboside A. Cells viability, Adenosine triphosphate (ATP), reactive oxygen species (ROS), nicotinamide adenine dinucleotide (NAD+), nicotinamide adenine dinucleotide hydride (NADH) content, and NAD+/NADH ratio were detected using biochemical methods. Inflammatory cytokines level was detected by enzyme-linked immunosorbent assay. The expression of CD38, Recombinant NLR Family, pyrin domain-containing protein 3 (NLRP3), and silent mating type information regulation 2 homolog 3 (SIRT3) protein was detected by Western blotting. Results: Compared to the IHR group, cell viability, ATP content, NAD + content, NAD+/NADH ratio, and SIRT3 protein expression decreased, ROS level and inflammatory cytokines increased, and CD38 and NLRP3 proteins raised in the D-gal + IHR group. Compared to the D-gal + IHR group, cell viability, ATP content, NAD + content, NAD+/NADH ratio, and expression of SIRT3 protein increased, ROS level and inflammatory cytokines level decreased, and expression of the CD38 and NLRP3 proteins decreased in the D-gal + IHR + Jujuboside A group. Conclusions: Jujuboside A inhibited the expression of CD38, improved energy metabolism disorder, and mitochondrial function, and decreased inflammation in D-gal-induced H9c2 cells.
目的:通过缺血-缺氧-再灌注(IHR)模型探讨红枣苷A对心肌的保护作用。材料与方法:采用d -半乳糖(D-gal)和IHR诱导H9c2细胞,建立衰老和IHR模型。采用生化方法检测各组细胞活力、三磷酸腺苷(ATP)、活性氧(ROS)、烟酰胺腺嘌呤二核苷酸(NAD+)、烟酰胺腺嘌呤二核苷酸氢化物(NADH)含量及NAD+/NADH比值。采用酶联免疫吸附法检测炎症因子水平。Western blotting检测CD38、重组NLR家族、pyrin结构域蛋白3 (NLRP3)和沉默交配型信息调控2同源物3 (SIRT3)蛋白的表达。结果:与IHR组比较,D-gal + IHR组细胞活力、ATP含量、NAD+含量、NAD+/NADH比值、SIRT3蛋白表达降低,ROS水平和炎症因子升高,CD38和NLRP3蛋白升高。与D-gal + IHR组相比,D-gal + IHR +红枣苷A组细胞活力、ATP含量、NAD+含量、NAD+/NADH比值、SIRT3蛋白表达升高,ROS水平和炎症因子水平降低,CD38和NLRP3蛋白表达降低。结论:红枣苷A抑制CD38的表达,改善d -gal诱导的H9c2细胞的能量代谢紊乱,改善线粒体功能,减轻炎症反应。
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引用次数: 0
Inhibitory interaction and pharmacological analyses of berries phenolics against Listeria monocytogenes virulent protein internalin B 浆果酚类物质对单核增生李斯特菌毒力蛋白internalin B的抑制作用及药理分析
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2311-8571.364413
Abhishek Kumar, A. Vimal, Awanish Kumar
Background: Traditional plants, their parts, and phytochemicals obtained from them are beneficial for human beings. They are used as potent antimicrobials, but very little research is conducted on the use of traditional medicine against food-borne infection. Different berry plants are rich in phenolic compounds and conventionally known to have many properties such as antioxidants, anti-carcinogenic, anti-inflammatory, anti-bacterial, and anti-diabetics. However, only limited polyphenols are known for their antilisterial effect. The present study aimed to explore the antimicrobial efficacy of phenolic compounds of berries for the treatment of food-borne infection caused by the bacteria Listeria monocytogenes. Materials and Methods: Molecular docking studies employing the SwissDOCK server were performed to evaluate the antimicrobial activity of phenolic compounds obtained from different varieties of berries. Internalin B (InlB), a virulence protein of L. monocytogenes was selected as a target. The absorption, distribution, metabolism, excretion, and toxicity profiling of each test ligand was done through the SwissADME tool. Results: Among all the test ligands, p-coumaric acid, epicatechins, chlorogenic acid, and quercetin showed better binding efficiency with the target protein InlB. The binding energy obtained for quercetin, p-coumaric acid, chlorogenic acid, and epicatechins was-8.93,-8.23,-8.18,-7.58, kcal/mol, respectively. Quercetin and p-coumaric acid were forming 4 H-bonds, whereas chlorogenic acid and epicatechins were forming 3-H bonds inside the binding pocket. Conclusion: In a nutshell, analyses indicated that identified ligands have the potential to block the virulent protein InlB of L. monocytogenes and help combat Listeria infection. These phenolic compounds could be a substitute for synthetic antimicrobials and can be used in food preservation and combat food-borne diseases. However, future in-depth in vitro and in vivo analysis is needed to get more information on these four phenolic ligands of berries.
背景:传统植物、它们的部分以及从中获得的植物化学物质对人类有益。它们被用作有效的抗菌剂,但很少有研究表明传统药物对食源性感染的作用。不同的浆果植物富含酚类化合物,通常已知具有许多特性,如抗氧化剂、抗癌、抗炎、抗菌和抗糖尿病。然而,已知只有有限的多酚具有抗李斯特菌作用。本研究旨在探讨浆果酚类化合物对单核细胞增多性李斯特菌引起的食源性感染的抗菌效果。材料和方法:使用SwissDOCK服务器进行分子对接研究,以评估从不同品种浆果中获得的酚类化合物的抗菌活性。以单核细胞增多性李斯特菌的毒力蛋白Internalin B(InlB)为靶标。通过SwissADME工具对每个测试配体的吸收、分布、代谢、排泄和毒性进行分析。结果:在所有测试配体中,对香豆酸、表儿茶素、绿原酸和槲皮素与靶蛋白InlB的结合效率较高。槲皮素、对香豆酸、绿原酸和表儿茶素的结合能分别为-8.93、-8.23、-8.18、-7.58、kcal/mol。槲皮素和对香豆酸在结合口袋内形成4H-键,而绿原酸和表儿茶素在结合口袋中形成3-H-键。结论:总之,分析表明,所鉴定的配体有可能阻断单核细胞增多性李斯特菌的毒力蛋白InlB,并有助于对抗李斯特菌感染。这些酚类化合物可以替代合成抗菌剂,可用于食品保鲜和对抗食源性疾病。然而,未来还需要深入的体外和体内分析,以获得更多关于浆果这四种酚类配体的信息。
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引用次数: 0
Application of photobiomodulation therapy in acupuncture 光生物调节疗法在针灸中的应用
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2022-10-01 DOI: 10.4103/wjtcm.wjtcm_12_22
Dong Wu, Yan-Ling Zhao, Ru-Jun Dai, P. Rong, Yu Wang
Photobiomodulation (PBM) therapy is a therapeutic method that can produce a range of physiological effects in cells and tissues using certain wavelengths. The reparative benefits of PBM therapy include wound healing, bone regeneration, pain reduction, and the mitigation of inflammation. Advances in the development of laser instruments, including the use of high-intensity lasers in physiotherapy, have recently led to controllable photothermal and photomechanical treatments that enable therapeutic effects to be obtained without damaging tissue. The combination of PBM therapy with acupuncture may provide new perspectives for investigating the underlying therapeutic mechanisms of acupuncture and promote its widespread application.
光生物调节(PBM)疗法是一种利用特定波长在细胞和组织中产生一系列生理效应的治疗方法。PBM治疗的修复益处包括伤口愈合、骨再生、疼痛减轻和炎症缓解。激光仪器的发展进步,包括在物理治疗中使用高强度激光,最近导致了可控的光热和光力学治疗,使治疗效果不损害组织。PBM疗法与针刺相结合,为研究针刺的潜在治疗机制和促进针灸的广泛应用提供了新的视角。
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引用次数: 3
The mechanism of Panax Notoginseng in the treatment of heart failure based on biological analysis 基于生物学分析的三七治疗心力衰竭的作用机制
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2022-10-01 DOI: 10.4103/2311-8571.326075
Lei Peng, Lin-Kun Ma, Qianqian Jiang, Xue Tian, Mingyan Shao, Changxiang Li, Xiaoqian Sun, Xiao Ma, Xu Chen, Chun Xing Li
Objective: This study aimed to explore the mechanism of Panax notoginseng (PNS) in the treatment of heart failure (HF) based on network pharmacology analysis combined with experimental verification. Materials and Methods: The potential targets and key pathways of effective components of PNS in the treatment of HF were revealed using network pharmacology. The postacute myocardial infarction (MI) HF rat model was established by ligating the left anterior descending branch of the coronary artery. The rats were divided into three groups: model, PNS, and fenofibrate groups. PNS (0.75 g/kg) and fenofibrate (10 mg/kg) were administered for 28 days. The efficacy and target mechanism of PNS in the treatment of HF were verified by cardiac ultrasound, Masson staining, and western blotting (WB) techniques. Results: The results of network pharmacology showed that seven potentially active compounds, such as quercetin, were obtained, involving 105 targets of HF; GO function was enriched to 1240 items; and KEGG enrichment covered 1240 signal pathways. The results of echocardiography showed that EF and FS of HF rats after MI were significantly increased, while Left ventricular internal dimension diastole (LVIDd) and Left ventricular internal dimension systole (LVIDs) were significantly decreased (P < 0.001, P < 0.05). Masson staining showed that PNS could reduce the degree of myocardial fibrosis (MF) in HF. The results of WB showed that PNS could reduce the expression of the p-p38-MAPK, transforming growth factor-beta (TGF-β), and Smad3 in HF rats. Conclusion: PNS inhibited MF and treated HF by regulating p-p38 MAPK-TGF-β pathway, which lays a theoretical foundation for further study of its pharmacological mechanism and key target.
目的:通过网络药理分析结合实验验证,探讨三七(PNS)治疗心力衰竭(HF)的作用机制。材料与方法:利用网络药理学方法揭示PNS有效成分治疗心衰的潜在靶点和关键通路。结扎冠状动脉左前降支,建立急性心肌梗死(MI)后HF大鼠模型。将大鼠分为模型组、PNS组和非诺贝特组。给予PNS (0.75 g/kg)和非诺贝特(10 mg/kg) 28天。采用心脏超声、Masson染色、western blotting (WB)技术验证PNS治疗HF的疗效及作用机制。结果:网络药理学结果显示,获得槲皮素等7个潜在活性化合物,涉及HF的105个靶点;GO功能丰富到1240项;KEGG富集覆盖了1240条信号通路。超声心动图结果显示,心肌梗死后HF大鼠EF、FS显著升高,左室舒张内径(LVIDd)和左室收缩内径(LVIDs)显著降低(P < 0.001, P < 0.05)。马松染色显示,PNS可减轻心衰心肌纤维化程度。WB结果显示,PNS可降低HF大鼠p-p38-MAPK、转化生长因子-β (TGF-β)和Smad3的表达。结论:PNS通过调节p-p38 MAPK-TGF-β通路抑制MF并治疗HF,为进一步研究其药理机制和关键靶点奠定了理论基础。
{"title":"The mechanism of Panax Notoginseng in the treatment of heart failure based on biological analysis","authors":"Lei Peng, Lin-Kun Ma, Qianqian Jiang, Xue Tian, Mingyan Shao, Changxiang Li, Xiaoqian Sun, Xiao Ma, Xu Chen, Chun Xing Li","doi":"10.4103/2311-8571.326075","DOIUrl":"https://doi.org/10.4103/2311-8571.326075","url":null,"abstract":"Objective: This study aimed to explore the mechanism of Panax notoginseng (PNS) in the treatment of heart failure (HF) based on network pharmacology analysis combined with experimental verification. Materials and Methods: The potential targets and key pathways of effective components of PNS in the treatment of HF were revealed using network pharmacology. The postacute myocardial infarction (MI) HF rat model was established by ligating the left anterior descending branch of the coronary artery. The rats were divided into three groups: model, PNS, and fenofibrate groups. PNS (0.75 g/kg) and fenofibrate (10 mg/kg) were administered for 28 days. The efficacy and target mechanism of PNS in the treatment of HF were verified by cardiac ultrasound, Masson staining, and western blotting (WB) techniques. Results: The results of network pharmacology showed that seven potentially active compounds, such as quercetin, were obtained, involving 105 targets of HF; GO function was enriched to 1240 items; and KEGG enrichment covered 1240 signal pathways. The results of echocardiography showed that EF and FS of HF rats after MI were significantly increased, while Left ventricular internal dimension diastole (LVIDd) and Left ventricular internal dimension systole (LVIDs) were significantly decreased (P < 0.001, P < 0.05). Masson staining showed that PNS could reduce the degree of myocardial fibrosis (MF) in HF. The results of WB showed that PNS could reduce the expression of the p-p38-MAPK, transforming growth factor-beta (TGF-β), and Smad3 in HF rats. Conclusion: PNS inhibited MF and treated HF by regulating p-p38 MAPK-TGF-β pathway, which lays a theoretical foundation for further study of its pharmacological mechanism and key target.","PeriodicalId":23692,"journal":{"name":"World Journal of Traditional Chinese Medicine","volume":null,"pages":null},"PeriodicalIF":4.4,"publicationDate":"2022-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46741402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Ginkgo biloba waste resources and waste treatment combined with modern progress and development model 银杏废弃物资源与废弃物处理结合现代进步与发展模式
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2022-10-01 DOI: 10.4103/2311-8571.355593
Yinglin Zhong
Background: Ginkgo biloba L. is listed in the Red List of Endangered Species by the International Union for Conservation of Nature. G. biloba is an important medicinal plant in China and can be widely used in materials, gardens, and as a source of nutrients. With the large-scale planting of ginkgo plants, China, accounts for more than 70% of the world's total gingko output. Currently, G. biloba P. E. is the main extract under product development and application. However, G. biloba has been discarded as waste for a long time and has not been well developed and utilized. According to incomplete statistics, nearly 40,000 tons are discarded in China every year, which not only wastes resources but also pollutes the environment. Objective: This is an issue of great significance and adds value to scientific research. We aim to develop a key technology for resource recycling by combining G. biloba waste resources and waste treatment. Methods: Data were obtained by searching databases such as CNKI, and analyzing the herb application, modern application, main chemical components, utilization of waste parts, ways and modes combined with waste treatment, and safety of G. biloba. This systematic analysis can serve as a reference for the recycling of waste resources in other fields. Conclusion: The chemical constituents of the outer seed coat of G. biloba mainly include hydrophenols, phenolic acids, and biflavones, among which the phenolic acid of G. biloba can be used to extract glycolic acid, which can inhibit Mycobacterium tuberculosis. The domestic waste produced by tuberculosis (TB) patients contains a large number of bacilli, and the incidence of transmission can be reduced by using glycolic acid to inhibit the growth of TB bacilli in the waste.
背景:银杏被国际自然保护联盟列入濒危物种红色名录。银杏是我国重要的药用植物,可广泛用于材料、园林和营养物质的来源。随着银杏植物的大规模种植,中国银杏产量占世界银杏总产量的70%以上。目前,银杏叶提取物是正在进行产品开发和应用的主要提取物。然而,银杏长期以来一直被当作废物丢弃,没有得到很好的开发和利用。据不完全统计,中国每年有近4万吨垃圾被丢弃,不仅浪费资源,还污染环境。目的:这是一个具有重大意义和增加科学研究价值的问题。我们的目标是通过将银杏废弃物资源与废弃物处理相结合,开发资源回收的关键技术。方法:通过检索CNKI等数据库获取数据,分析银杏的中草药应用、现代应用、主要化学成分、废弃部位的利用、与废弃物处理相结合的方式和模式以及安全性。这一系统的分析可以为其他领域的废物资源回收利用提供参考。结论:银杏外种皮的化学成分主要包括酚类、酚酸和双黄酮类,其中银杏酚酸可用于提取乙醇酸,乙醇酸可抑制结核分枝杆菌。结核病患者产生的生活垃圾中含有大量的杆菌,通过使用乙醇酸抑制垃圾中结核杆菌的生长,可以降低传播的发生率。
{"title":"Ginkgo biloba waste resources and waste treatment combined with modern progress and development model","authors":"Yinglin Zhong","doi":"10.4103/2311-8571.355593","DOIUrl":"https://doi.org/10.4103/2311-8571.355593","url":null,"abstract":"Background: Ginkgo biloba L. is listed in the Red List of Endangered Species by the International Union for Conservation of Nature. G. biloba is an important medicinal plant in China and can be widely used in materials, gardens, and as a source of nutrients. With the large-scale planting of ginkgo plants, China, accounts for more than 70% of the world's total gingko output. Currently, G. biloba P. E. is the main extract under product development and application. However, G. biloba has been discarded as waste for a long time and has not been well developed and utilized. According to incomplete statistics, nearly 40,000 tons are discarded in China every year, which not only wastes resources but also pollutes the environment. Objective: This is an issue of great significance and adds value to scientific research. We aim to develop a key technology for resource recycling by combining G. biloba waste resources and waste treatment. Methods: Data were obtained by searching databases such as CNKI, and analyzing the herb application, modern application, main chemical components, utilization of waste parts, ways and modes combined with waste treatment, and safety of G. biloba. This systematic analysis can serve as a reference for the recycling of waste resources in other fields. Conclusion: The chemical constituents of the outer seed coat of G. biloba mainly include hydrophenols, phenolic acids, and biflavones, among which the phenolic acid of G. biloba can be used to extract glycolic acid, which can inhibit Mycobacterium tuberculosis. The domestic waste produced by tuberculosis (TB) patients contains a large number of bacilli, and the incidence of transmission can be reduced by using glycolic acid to inhibit the growth of TB bacilli in the waste.","PeriodicalId":23692,"journal":{"name":"World Journal of Traditional Chinese Medicine","volume":null,"pages":null},"PeriodicalIF":4.4,"publicationDate":"2022-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43546408","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Application of the data mining algorithm in the clinical guide medical records 数据挖掘算法在临床指导病历中的应用
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2022-10-01 DOI: 10.4103/2311-8571.351511
Xin-Yuan Liu, Jinghua Li, Ying-Hui Wang, Lim Weihan, Yi-Meng Wang, Ye Tian, Yan Huang, Shaolei Tian, Qi Yu
Objective: This study analyzed the data of the medical cases in the book, “Clinical Guide Medical records” using a data mining method, to provide a reference for Ye Tianshi's academic thoughts. Methods: We used the web version of the ancient and modern medical records cloud platform to complete distribution statistics, association rules, cluster analysis, and complex network analysis of all the medical records in the “Clinical Guide Medical records.” These methods were used to summarize the baseline data and to identify the core relationship between Chinese medicine diseases and Chinese medicine, as well as the Chinese medicine Classification. Results: A total of 2572 medical records, 3136 visits, and 2879 prescriptions of 1127 traditional Chinese medicines were included in this study. The most common diseases (such as hematemesis), syndromes (such as liver–stomach disharmony), symptoms (such as rapid pulse), disease sites (such as gastric cavity), disease properties (such as Yang deficiency), treatment methods (such as activating Yang), and traditional Chinese medicines (such as Poria cocos) were identified. Furthermore, medicines with a warm, flat, cold, sweet, or bitter taste with its effects on the lungs, spleen, and heart were the most common. The observed effects of the drugs included clearing dampness, promoting diuresis, and strengthening the spleen. The association analysis showed that the associations between TCM diseases and traditional Chinese medicines that had a high confidence were “phlegm and fluid retention–Poria cocos,” “diarrhea–Poria cocos,” etc. The cluster analysis showed that traditional Chinese medicines were classified into five categories. The complex network showed the core relationship between nine high-frequency diseases and nine high-frequency traditional Chinese medicine. Conclusion: This study revealed the most important relationships between traditional Chinese medicines diseases and traditional Chinese medicines and classified the most used traditional Chinese medicines. These findings may help the coming generations of doctors to make accurate diagnoses and treat patients effectively and to improve the clinicians' efficacy in clinical diagnosis and treatment.
目的:采用数据挖掘方法,对《临床指南》一书中的病例数据进行分析,为叶天石的学术思想提供参考。方法:利用网络版的古今中外病历云平台,对《临床指南》中的所有病历进行分布统计、关联规则、聚类分析和复杂网络分析。“这些方法被用来总结基线数据,并确定中医疾病和中医之间的核心关系,以及中医分类。结果:本研究共纳入2572份病历、3136次就诊和1127种中药的2879个处方。确定了最常见的疾病(如吐血)、证候(如肝胃不和)、症状(如脉急)、病位(如胃脘)、病性(如阳虚)、治疗方法(如活血)和中药(如茯苓)。此外,温、平、寒、甜或苦的药物对肺、脾和心脏的影响最为常见。观察到这些药物的作用包括清热、利尿和健脾。关联分析显示,中医疾病与具有高置信度的中药之间的关联为“痰液滞留-茯苓”、“腹泻-茯苓”等。聚类分析显示,中药分为五类。复杂的网络显示了九种高频疾病与九种高频中医之间的核心关系。结论:本研究揭示了中医疾病与中药之间最重要的关系,并对最常用的中药进行了分类。这些发现可能有助于下一代医生做出准确的诊断和有效治疗患者,并提高临床医生的临床诊断和治疗效率。
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引用次数: 5
Exploring the molecular mechanism of Radix Astragali on colon cancer based on integrated pharmacology and molecular docking technique 基于综合药理学和分子对接技术探讨黄芪治疗结肠癌的分子机制
IF 4.4 3区 医学 Q2 Medicine Pub Date : 2022-10-01 DOI: 10.4103/2311-8571.355594
Yong Jiang, Yaodan Chang, M. Wang, Yan-ping Sun, Yuelin Bi, Zhibin Wang, H. Kuang
Objective: The objective of this study was to study the mechanism of Radix Astragali on colon cancer by integrated pharmacology and molecular docking technique. Methods: Integrative pharmacology-based research platform of traditional Chinese medicine (TCMIP) V2.0 was used to obtain the chemical components and corresponding targets of Radix Astragali and the target information of colon cancer to create the main target network of drugs and diseases. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis was carried out using Hiplot website, and the interaction network of “Traditional Chinese Medicine-component-target-pathway” was established, and molecular docking with main targets was carried out for the key components. Results: Twenty-seven chemical constituents of Radix Astragali, their 254 corresponding targets, and 44 colon cancer-related targets were obtained. Through proteins interacting, 70 nodes were obtained as core targets. GO analysis showed that it mainly acts on lipid metabolism, nuclear receptor activity, phagocytic cup, etc. KEGG pathway analysis showed that it was mainly enriched in the estrogen signaling pathway, C-type lectin receptor signaling pathway, PI3K-Akt signaling pathway, etc. The multidimensional network, quantitative estimate of the drug, and molecular docking showed that the main targets are AKT1, BCL2, and CDK6, and the key components involved are kumatakenin, astragaloside VIII, and choline. Conclusion: Kumatakenin, Astragaloside VIII, Choline and other compounds of Radix Astragali may affect colon cancer by acting on AKT1, BCL2 and other targets, thereby regulating estrogen signaling pathway, C-type lectin receptor signaling pathway, PI3K-Akt signaling pathway and so on. Those will provide theoretical reference for future research on the material basis and mechanism of its pharmacodynamics.
目的:采用综合药理学和分子对接技术,探讨黄芪对结肠癌的作用机制。方法:利用中医药综合药理学研究平台(TCMIP) V2.0获取黄芪的化学成分、相应靶点及结肠癌的靶点信息,构建药物和疾病的主要靶点网络。利用Hiplot网站进行基因本体(GO)、京都基因与基因组百科全书(KEGG)富集分析,建立“中药-成分-靶点-通路”交互网络,对关键成分与主要靶点进行分子对接。结果:获得了黄芪27种化学成分,254个对应靶点,44个结肠癌相关靶点。通过蛋白相互作用,获得70个节点作为核心靶点。氧化石墨烯分析显示其主要作用于脂质代谢、核受体活性、吞噬杯等。KEGG通路分析显示其主要富集于雌激素信号通路、c型凝集素受体信号通路、PI3K-Akt信号通路等。多维网络、药物定量估计和分子对接表明,主要靶点为AKT1、BCL2和CDK6,参与的关键成分为熊掌草素、黄芪甲苷VIII和胆碱。结论:黄芪中的熊熊素、黄芪甲苷VIII、胆碱等化合物可能通过作用于AKT1、BCL2等靶点影响结肠癌,从而调控雌激素信号通路、c型凝集素受体信号通路、PI3K-Akt信号通路等。为进一步研究其药理作用的物质基础和机制提供理论参考。
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引用次数: 2
期刊
World Journal of Traditional Chinese Medicine
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