Eileen Y Koh, Adrian K S Tan, Yin Cheong Aden Ip, Clara Lau, Jasmine Ong, Oi Wing Ng, Jing Chen, Christine Lee, Suria Fabbri, Juline Chua, Samyuktha Balakumar, Kelvin Ho, Wai Kwan Wong, Brian Z Y Tan, Charlene Judith Fernandez, Siow Foong Chang, Him Hoo Yap
Lumpy Skin Disease (LSD) is a transboundary viral disease of wild and domesticated ruminants, and notifiable to the World Organisation for Animal Health (WOAH). LSD has spread rapidly in the cattle population across the African, European and Asian continents since 1929. Following recent outbreaks in the Southeast Asia region, Singapore observed its first occurrence of LSD in a local dairy cattle farm in March 2022. LSD was confirmed in dairy cattle exhibiting clinical signs with quantitative real-time PCR and sequencing with MinION Nanopore. Analyses of the assembled whole viral genomes also revealed high phylogenetic relatedness to LSD recombinant strains. It remains unclear how the virus was introduced into Singapore, given the absence of known vectors and strict import regulations in place. This highlights the importance of biosurveillance, and laboratory diagnostic readiness to manage outbreaks and prevent the spread of transboundary diseases.
{"title":"Genetic Characterization of the First Case of Lumpy Skin Disease in Singapore, 2022.","authors":"Eileen Y Koh, Adrian K S Tan, Yin Cheong Aden Ip, Clara Lau, Jasmine Ong, Oi Wing Ng, Jing Chen, Christine Lee, Suria Fabbri, Juline Chua, Samyuktha Balakumar, Kelvin Ho, Wai Kwan Wong, Brian Z Y Tan, Charlene Judith Fernandez, Siow Foong Chang, Him Hoo Yap","doi":"10.3390/vetsci12111108","DOIUrl":"10.3390/vetsci12111108","url":null,"abstract":"<p><p>Lumpy Skin Disease (LSD) is a transboundary viral disease of wild and domesticated ruminants, and notifiable to the World Organisation for Animal Health (WOAH). LSD has spread rapidly in the cattle population across the African, European and Asian continents since 1929. Following recent outbreaks in the Southeast Asia region, Singapore observed its first occurrence of LSD in a local dairy cattle farm in March 2022. LSD was confirmed in dairy cattle exhibiting clinical signs with quantitative real-time PCR and sequencing with MinION Nanopore. Analyses of the assembled whole viral genomes also revealed high phylogenetic relatedness to LSD recombinant strains. It remains unclear how the virus was introduced into Singapore, given the absence of known vectors and strict import regulations in place. This highlights the importance of biosurveillance, and laboratory diagnostic readiness to manage outbreaks and prevent the spread of transboundary diseases.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656970/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Feline herpesvirus type-1 (FHV-1), a double-stranded DNA virus, which is a highly infectious upper respiratory tract infection of felids, particularly in kittens. Droplet digital PCR (ddPCR) provides an absolute quantification method with high sensitivity and accuracy. This study aimed to develop a highly sensitive and accurate ddPCR assay for the detection of FHV-1. We designed primers and a probe targeting the FHV-1 glycoprotein D (gD) gene and evaluated the assay's limit of detection (LOD), sensitivity, repeatability, and specificity in comparison to quantitative real-time PCR (qPCR). The developed ddPCR assay demonstrated a strong linear dynamic range (R2 ≥ 0.99) and an exceptionally low LOD of 0.18 copies/μL, which was significantly more sensitive than the method qPCR (LOD ~10 copies/μL). Additionally, the assay exhibited high specificity with no cross-reactivity against other common feline pathogens (feline calicivirus, FCV; feline panleukopenia virus, FPV; feline infectious peritonitis virus, FIPV; Bordetella bronchiseptica and Chlamydia felis) and displayed outstanding repeatability (inter-run CV < 1.35). When applied to 118 clinical samples, the ddPCR assay achieved a significantly higher positive detection rate (27.4%) compared to qPCR (14.8%). In conclusion, we have successfully established a reliable ddPCR assay for the absolute quantification of FHV-1, providing a superior tool for laboratory diagnosis and research.
{"title":"Development and Validation of a Droplet Digital PCR Assay for Detection of Feline Herpesvirus Type-1.","authors":"Yaxi Zhou, Danni Wu, Mengle Tang, Zihan Ye, Erkai Feng, Haili Zhang, Guoliang Luo, Zhenjun Wang, Chunxia Wang, Lina Liu, Yuening Cheng","doi":"10.3390/vetsci12111107","DOIUrl":"10.3390/vetsci12111107","url":null,"abstract":"<p><p>Feline herpesvirus type-1 (FHV-1), a double-stranded DNA virus, which is a highly infectious upper respiratory tract infection of felids, particularly in kittens. Droplet digital PCR (ddPCR) provides an absolute quantification method with high sensitivity and accuracy. This study aimed to develop a highly sensitive and accurate ddPCR assay for the detection of FHV-1. We designed primers and a probe targeting the FHV-1 glycoprotein D (gD) gene and evaluated the assay's limit of detection (LOD), sensitivity, repeatability, and specificity in comparison to quantitative real-time PCR (qPCR). The developed ddPCR assay demonstrated a strong linear dynamic range (R<sup>2</sup> ≥ 0.99) and an exceptionally low LOD of 0.18 copies/μL, which was significantly more sensitive than the method qPCR (LOD ~10 copies/μL). Additionally, the assay exhibited high specificity with no cross-reactivity against other common feline pathogens (feline calicivirus, FCV; feline panleukopenia virus, FPV; feline infectious peritonitis virus, FIPV; <i>Bordetella bronchiseptica</i> and <i>Chlamydia felis</i>) and displayed outstanding repeatability (inter-run CV < 1.35). When applied to 118 clinical samples, the ddPCR assay achieved a significantly higher positive detection rate (27.4%) compared to qPCR (14.8%). In conclusion, we have successfully established a reliable ddPCR assay for the absolute quantification of FHV-1, providing a superior tool for laboratory diagnosis and research.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656784/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606528","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Léa Mornard, Anna Carolina Massara Brasileiro, Mário Marcondes-Santos
In 2018, the Food and Drug Administration (FDA) reported cases of dilated cardiomyopathy (DCM) in dogs, including breeds without known genetic predisposition, fed diets containing a high proportion of legumes or potatoes, many labeled grain-free. Despite concerns, grain-free diets remain increasingly popular. This narrative review focuses on the peer-reviewed literature and summarizes recent studies evaluating the effects of grain-free diets on canine cardiac health, with emphasis on taurine deficiency, metabolic alterations, and emerging hypotheses extending beyond nutritional inadequacy. These findings suggest a strong link between diet and DCM, particularly regarding legumes. Dogs of various breeds showed larger left ventricular diameters, reduced systolic function, and increased premature ventricular complexes when fed non-traditional, grain-free, legume-rich diets compared to those on traditional, low-legume diets. Many affected dogs improved clinically and functionally with dietary changes and treatment, suggesting nutritional DCM could be reversible. Though mechanisms remain unclear, the research highlights the potential roles of legumes, particularly peas, in the gut microbiota and fiber-related bile acid metabolism. This review also distinguishes taurine-deficiency-related DCM as a separate form, with certain breeds, notably Golden Retrievers, being more susceptible. Overall, further studies are required to better understand the role of nutrition in canine cardiac health.
{"title":"Role of Diet as a Predisposing Factor for Dilated Cardiomyopathy in Dogs: A Narrative Review.","authors":"Léa Mornard, Anna Carolina Massara Brasileiro, Mário Marcondes-Santos","doi":"10.3390/vetsci12111106","DOIUrl":"10.3390/vetsci12111106","url":null,"abstract":"<p><p>In 2018, the Food and Drug Administration (FDA) reported cases of dilated cardiomyopathy (DCM) in dogs, including breeds without known genetic predisposition, fed diets containing a high proportion of legumes or potatoes, many labeled grain-free. Despite concerns, grain-free diets remain increasingly popular. This narrative review focuses on the peer-reviewed literature and summarizes recent studies evaluating the effects of grain-free diets on canine cardiac health, with emphasis on taurine deficiency, metabolic alterations, and emerging hypotheses extending beyond nutritional inadequacy. These findings suggest a strong link between diet and DCM, particularly regarding legumes. Dogs of various breeds showed larger left ventricular diameters, reduced systolic function, and increased premature ventricular complexes when fed non-traditional, grain-free, legume-rich diets compared to those on traditional, low-legume diets. Many affected dogs improved clinically and functionally with dietary changes and treatment, suggesting nutritional DCM could be reversible. Though mechanisms remain unclear, the research highlights the potential roles of legumes, particularly peas, in the gut microbiota and fiber-related bile acid metabolism. This review also distinguishes taurine-deficiency-related DCM as a separate form, with certain breeds, notably Golden Retrievers, being more susceptible. Overall, further studies are required to better understand the role of nutrition in canine cardiac health.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656978/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Veronica Camosci, Claudia Canton, Laura Ventura, Giovanna Bertolini
The aim of this retrospective study was to compare lesion conspicuity-the visibility of a lesion relative to surrounding tissue-and CT characteristics of pancreatic insulinomas in dogs using multiphase dual-energy CT (DECT) and dynamic 4D perfusion CT. Seventy dogs with insulinomas, confirmed either cytologically or histologically, or with clinical and imaging findings consistent with the diagnosis, were included. Forty dogs underwent perfusion CT and 30 underwent multiphase DECT on a dual-source, dual-energy CT scanner (192 × 2 detector configuration). Imaging evaluations focused on arterial and portal phases for DECT, and early arterial, late arterial, pancreatic, and portal venous phases for perfusion CT. Tumor conspicuity was quantified using the tumor-to-pancreas ratio (TPR) and contrast-to-noise ratio (CNR), while time-to-peak (TTP) enhancement was recorded for both tumors and pancreatic parenchyma. Perfusion CT demonstrated significantly higher TPR and CNR values compared to DECT (p < 0.001), indicating improved tumor visibility. The late arterial phase of perfusion CT, although not statistically significant, showed the highest median TPR and CNR. Mean TTP for tumors was 38.8 s, slightly earlier than the pancreatic parenchyma (41.25 s). In conclusion, perfusion CT appears to enhance visualization of insulinomas in dogs, particularly between 34 and 44 s after contrast injection, aligning with the late arterial phase of perfusion CT.
{"title":"Quantitative Conspicuity of Pancreatic Canine Insulinoma: A Comparison of Dynamic 4D CT and Dual-Source, Dual-Energy Bolus-Triggered Multiphase CT Imaging.","authors":"Veronica Camosci, Claudia Canton, Laura Ventura, Giovanna Bertolini","doi":"10.3390/vetsci12111102","DOIUrl":"10.3390/vetsci12111102","url":null,"abstract":"<p><p>The aim of this retrospective study was to compare lesion conspicuity-the visibility of a lesion relative to surrounding tissue-and CT characteristics of pancreatic insulinomas in dogs using multiphase dual-energy CT (DECT) and dynamic 4D perfusion CT. Seventy dogs with insulinomas, confirmed either cytologically or histologically, or with clinical and imaging findings consistent with the diagnosis, were included. Forty dogs underwent perfusion CT and 30 underwent multiphase DECT on a dual-source, dual-energy CT scanner (192 × 2 detector configuration). Imaging evaluations focused on arterial and portal phases for DECT, and early arterial, late arterial, pancreatic, and portal venous phases for perfusion CT. Tumor conspicuity was quantified using the tumor-to-pancreas ratio (TPR) and contrast-to-noise ratio (CNR), while time-to-peak (TTP) enhancement was recorded for both tumors and pancreatic parenchyma. Perfusion CT demonstrated significantly higher TPR and CNR values compared to DECT (<i>p</i> < 0.001), indicating improved tumor visibility. The late arterial phase of perfusion CT, although not statistically significant, showed the highest median TPR and CNR. Mean TTP for tumors was 38.8 s, slightly earlier than the pancreatic parenchyma (41.25 s). In conclusion, perfusion CT appears to enhance visualization of insulinomas in dogs, particularly between 34 and 44 s after contrast injection, aligning with the late arterial phase of perfusion CT.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656957/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606429","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lei Yao, Jin Liu, Weinan Hong, Fanrong Kong, Zipei Fan, Lin Lei, Xinwei Li
Accurate and non-invasive monitoring of dairy cows is a cornerstone of precision livestock farming, paving the way for proactive health management and earlier disease detection. The development of robust, AI-driven diagnostic tools, however, is hindered by a dual challenge: scarce realistic video datasets and a lack of standardized benchmarks for deep learning models. To confront these issues, this study puts forward SideCow-VSS, a video semantic segmentation dataset comprising 921 side-view clips with dense, pixel-level annotations of dairy cows under variable on-farm conditions. We systematically evaluated eight deep learning architectures, from classic convolutional neural networks to state-of-the-art Transformers. The evaluation highlighted a clear performance trade-off: the Mask2Former model with a Swin-L backbone yielded the highest mIoU at 97.32%, making it well-suited for detailed morphological analysis. In contrast, the lightweight PIDNet-s model achieved the fastest inference speed of 59.5 FPS, demonstrating its potential for real-time behavioral alerting systems. This work delivers a foundational resource and quantitative framework to inform model selection, accelerating the creation of computer vision systems for automated health monitoring and adopting preventive strategies against key metabolic and immunological disorders in dairy production.
{"title":"SideCow-VSS: A Video Semantic Segmentation Dataset and Benchmark for Intelligent Monitoring of Dairy Cows Health in Smart Ranch Environments.","authors":"Lei Yao, Jin Liu, Weinan Hong, Fanrong Kong, Zipei Fan, Lin Lei, Xinwei Li","doi":"10.3390/vetsci12111104","DOIUrl":"10.3390/vetsci12111104","url":null,"abstract":"<p><p>Accurate and non-invasive monitoring of dairy cows is a cornerstone of precision livestock farming, paving the way for proactive health management and earlier disease detection. The development of robust, AI-driven diagnostic tools, however, is hindered by a dual challenge: scarce realistic video datasets and a lack of standardized benchmarks for deep learning models. To confront these issues, this study puts forward SideCow-VSS, a video semantic segmentation dataset comprising 921 side-view clips with dense, pixel-level annotations of dairy cows under variable on-farm conditions. We systematically evaluated eight deep learning architectures, from classic convolutional neural networks to state-of-the-art Transformers. The evaluation highlighted a clear performance trade-off: the Mask2Former model with a Swin-L backbone yielded the highest mIoU at 97.32%, making it well-suited for detailed morphological analysis. In contrast, the lightweight PIDNet-s model achieved the fastest inference speed of 59.5 FPS, demonstrating its potential for real-time behavioral alerting systems. This work delivers a foundational resource and quantitative framework to inform model selection, accelerating the creation of computer vision systems for automated health monitoring and adopting preventive strategies against key metabolic and immunological disorders in dairy production.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656752/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Carmen Peñas Rodríguez, Manuel Fuertes-Recuero, Teresa Encinas Cerezo, Manuel de la Riva-Fraga, Andrés Montesinos Barceló, Pablo Morón-Elorza
The Iberian ribbed newt (Pleurodeles waltl) is a salamander in the Salamandridae family. Endemic to the Iberian Peninsula and North Africa, it is not commonly found in zoological institutions or wildlife rescue centers. As in other species, routine blood analysis of amphibians under human care is highly recommended, forming an essential component of preventive medicine and effective clinical management. However, despite the great utility of hematological parameters for the diagnosis and prevention of diseases in amphibians, the lack of reliable reference values for many species severely limits their clinical use. The aim of this study is to establish preliminary reference values (RV) for the main hematological parameters in the Iberian ribbed newt. Blood samples were taken from healthy adult individuals (n = 30), females (n = 9) and males (n = 21) maintained under controlled conditions in two zoological institutions. A complete hematological analysis was conducted, which included measurements of hematocrit, total erythrocyte and leukocyte counts, as well as a leukocyte differential. The reference intervals were established according to the guidelines provided by the American Society for Veterinary Clinical Pathology (ASVCP) for sample sizes between 20 and 40 individuals. No significant sex-related differences were detected in the hematological parameters analyzed. Despite the broad reference ranges obtained, these preliminary data provide an essential foundation for the clinical assessment and preventive medical management of P. waltl under human care. Expanding the dataset through collaboration with additional institutions will further refine and improve the accuracy and clinical utility of these reference values.
{"title":"Hematology Reference Values for the Iberian Ribbed Newt (<i>Pleurodeles waltl</i>) Under Human Care.","authors":"Carmen Peñas Rodríguez, Manuel Fuertes-Recuero, Teresa Encinas Cerezo, Manuel de la Riva-Fraga, Andrés Montesinos Barceló, Pablo Morón-Elorza","doi":"10.3390/vetsci12111103","DOIUrl":"10.3390/vetsci12111103","url":null,"abstract":"<p><p>The Iberian ribbed newt (<i>Pleurodeles waltl</i>) is a salamander in the Salamandridae family. Endemic to the Iberian Peninsula and North Africa, it is not commonly found in zoological institutions or wildlife rescue centers. As in other species, routine blood analysis of amphibians under human care is highly recommended, forming an essential component of preventive medicine and effective clinical management. However, despite the great utility of hematological parameters for the diagnosis and prevention of diseases in amphibians, the lack of reliable reference values for many species severely limits their clinical use. The aim of this study is to establish preliminary reference values (RV) for the main hematological parameters in the Iberian ribbed newt. Blood samples were taken from healthy adult individuals (<i>n =</i> 30), females (<i>n =</i> 9) and males (<i>n</i> = 21) maintained under controlled conditions in two zoological institutions. A complete hematological analysis was conducted, which included measurements of hematocrit, total erythrocyte and leukocyte counts, as well as a leukocyte differential. The reference intervals were established according to the guidelines provided by the American Society for Veterinary Clinical Pathology (ASVCP) for sample sizes between 20 and 40 individuals. No significant sex-related differences were detected in the hematological parameters analyzed. Despite the broad reference ranges obtained, these preliminary data provide an essential foundation for the clinical assessment and preventive medical management of <i>P. waltl</i> under human care. Expanding the dataset through collaboration with additional institutions will further refine and improve the accuracy and clinical utility of these reference values.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656763/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606490","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Honghong Hu, Zhaodi Xu, Liyun Han, Zhixuan Qiao, Yi Wang, Yikun Jia, Tong Mu, Yun Ma
The objectives of this study were to estimate genetic parameters for stayability in Chinese Holstein cattle and to estimate its genetic correlations with routinely collected traits. Although knowledge and genetic breeding technologies for dairy cattle have advanced, the lifespan of dairy cows has been declining, mainly due to increased production stress and associated health problems. This makes the genetic improvement of Holstein cattle crucial for sustainable production. Stayability is an indicator trait reflecting longevity, measured as the survival probability of dairy cows at specific stages. To evaluate temporal differences in herd retention, we defined 7 stayability traits as the ability of cows to remain in the herd for 36 (S36), 42 (S42), 48 (S48), 54 (S54), 60 (S60), 72 (S72), and 84 (S84) months after first calving. Data from 56,630 cows between 2011 and 2020 across 14 dairy farms in Ningxia were considered for stayability analyses. Survival analysis using non-parametric methods showed that cattle with sterility had the longest survival time, while those with abomasal displacement had the shortest survival time. The heritability estimates (±standard error) for S36, S42, S48, S54, S60, S72 and S84 were 0.048 ± 0.006, 0.063 ± 0.006, 0.074 ± 0.007, 0.099 ± 0.007, 0.115 ± 0.007, 0.088 ± 0.007, 0.118 ± 0.008, respectively. The genetic and phenotypic correlations among stayability traits ranged from 0.382 to 0.975 and from 0.090 to 0.799, respectively. Furthermore, the approximate genetic correlations between stayability and routinely collected traits (8 production, 20 conformation, 13 fertility, 13 health traits) were assessed. Stayability showed low to moderate genetic correlations with most of these traits. In summary, developing a selection index that incorporates stayability is expected to improve the longevity of dairy cows. All unfavorable genetic relationships observed between stayability and other routinely collected traits should be accounted for in a selection index, thereby enhancing the lifespan of Holstein cattle while maintaining or improving productive performance.
{"title":"Genetic Analysis of Stayability and its Relationships with Production, Conformation, Fertility and Health Traits in Holstein Cattle.","authors":"Honghong Hu, Zhaodi Xu, Liyun Han, Zhixuan Qiao, Yi Wang, Yikun Jia, Tong Mu, Yun Ma","doi":"10.3390/vetsci12111105","DOIUrl":"10.3390/vetsci12111105","url":null,"abstract":"<p><p>The objectives of this study were to estimate genetic parameters for stayability in Chinese Holstein cattle and to estimate its genetic correlations with routinely collected traits. Although knowledge and genetic breeding technologies for dairy cattle have advanced, the lifespan of dairy cows has been declining, mainly due to increased production stress and associated health problems. This makes the genetic improvement of Holstein cattle crucial for sustainable production. Stayability is an indicator trait reflecting longevity, measured as the survival probability of dairy cows at specific stages. To evaluate temporal differences in herd retention, we defined 7 stayability traits as the ability of cows to remain in the herd for 36 (S36), 42 (S42), 48 (S48), 54 (S54), 60 (S60), 72 (S72), and 84 (S84) months after first calving. Data from 56,630 cows between 2011 and 2020 across 14 dairy farms in Ningxia were considered for stayability analyses. Survival analysis using non-parametric methods showed that cattle with sterility had the longest survival time, while those with abomasal displacement had the shortest survival time. The heritability estimates (±standard error) for S36, S42, S48, S54, S60, S72 and S84 were 0.048 ± 0.006, 0.063 ± 0.006, 0.074 ± 0.007, 0.099 ± 0.007, 0.115 ± 0.007, 0.088 ± 0.007, 0.118 ± 0.008, respectively. The genetic and phenotypic correlations among stayability traits ranged from 0.382 to 0.975 and from 0.090 to 0.799, respectively. Furthermore, the approximate genetic correlations between stayability and routinely collected traits (8 production, 20 conformation, 13 fertility, 13 health traits) were assessed. Stayability showed low to moderate genetic correlations with most of these traits. In summary, developing a selection index that incorporates stayability is expected to improve the longevity of dairy cows. All unfavorable genetic relationships observed between stayability and other routinely collected traits should be accounted for in a selection index, thereby enhancing the lifespan of Holstein cattle while maintaining or improving productive performance.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656929/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Methane (CH4) produced by methanogenic archaea during the rumen fermentation of feed carbohydrates leads to global warming and total energy loss. This study aims to compare the accuracy of multiple linear regression (MLR) models and backpropagation neural network (BPNN) in predicting ruminal CH4 production of the carbohydrate (Carbs) components of the Cornell Net Carbohydrate and Protein System (CNCPS) in mixed rations of beef cattle with different concentrate-to-forage (C/F) ratios. Two datasets were established using the in vitro fermentation method of Menke and Steingass. One of the datasets contained 60 mixed rations with C/F ratios of 30:70, 40:60, 50:50, 60:40, 70:30, 80:20, and 90:10, respectively, which were used to develop CH4 prediction models. Another dataset included 10 mixed rations with the same C/F ratios, which were used to validate and compare the accuracy of the prediction models. Results indicated that there was a significant multiple regression relationship between CH4 production and the Carbs-components (CA (sugars), CB1 (starch and pectin), CB2 (available cell wall), CC (unavailable cell wall)) of CNCPS (r2 = 0.91, p < 0.0001). An optimal BPNN model with 2 hidden-layer neuron nodes was established with the same variables (r2 = 0.93, p < 0.0001). The findings demonstrated that both MLR and BPNN models (p < 0.0001) were suitable for predicting CH4 production using the Carbs components (CA, CB1, CB2, CC) of CNCPS. However, compared with the MLR model, the BPNN model has a greater coefficient of determination (r2) value and concordance correlation coefficient (CCC), and a lower root mean square prediction error (RMSPE), demonstrating better prediction performance.
产甲烷古菌在饲料碳水化合物的瘤胃发酵过程中产生的甲烷(CH4)导致全球变暖和总能量损失。本研究旨在比较多元线性回归(MLR)模型和反向传播神经网络(BPNN)预测不同精粗比肉牛混合日粮中康奈尔净碳水化合物和蛋白质系统(CNCPS)碳水化合物组分瘤胃CH4产量的准确性。采用门克酵母和施泰格斯酵母体外发酵法建立了两个数据集。其中一个数据集包含60个碳氟比分别为30:70、40:60、50:50、60:40、70:30、80:20和90:10的混合饲料,用于建立CH4预测模型。另一个数据集包括10种具有相同碳氟比的混合饲料,用于验证和比较预测模型的准确性。结果表明,CH4产量与CNCPS碳水化合物组分(CA(糖)、CB1(淀粉和果胶)、CB2(有效细胞壁)、CC(不可用细胞壁)之间存在显著的多元回归关系(r2 = 0.91, p < 0.0001)。在相同的变量条件下,建立了包含2个隐藏层神经元节点的最优BPNN模型(r2 = 0.93, p < 0.0001)。结果表明,MLR和BPNN模型(p < 0.0001)均适用于CNCPS碳水化合物组分(CA, CB1, CB2, CC)的CH4产量预测。然而,与MLR模型相比,BPNN模型具有更大的决定系数(r2)值和一致性相关系数(CCC),并且具有更低的均方根预测误差(RMSPE),显示出更好的预测性能。
{"title":"Comparative Prediction of Methane Production In Vitro Using Multiple Regression Model and Backpropagation Neural Network Based on Cornell Net Carbohydrate and Protein System.","authors":"Guanghui Yu, Zenghui Li, Ruilan Dong","doi":"10.3390/vetsci12111099","DOIUrl":"10.3390/vetsci12111099","url":null,"abstract":"<p><p>Methane (CH<sub>4</sub>) produced by methanogenic archaea during the rumen fermentation of feed carbohydrates leads to global warming and total energy loss. This study aims to compare the accuracy of multiple linear regression (MLR) models and backpropagation neural network (BPNN) in predicting ruminal CH<sub>4</sub> production of the carbohydrate (Carbs) components of the Cornell Net Carbohydrate and Protein System (CNCPS) in mixed rations of beef cattle with different concentrate-to-forage (C/F) ratios. Two datasets were established using the in vitro fermentation method of Menke and Steingass. One of the datasets contained 60 mixed rations with C/F ratios of 30:70, 40:60, 50:50, 60:40, 70:30, 80:20, and 90:10, respectively, which were used to develop CH<sub>4</sub> prediction models. Another dataset included 10 mixed rations with the same C/F ratios, which were used to validate and compare the accuracy of the prediction models. Results indicated that there was a significant multiple regression relationship between CH<sub>4</sub> production and the Carbs-components (CA (sugars), CB<sub>1</sub> (starch and pectin), CB<sub>2</sub> (available cell wall), CC (unavailable cell wall)) of CNCPS (r<sup>2</sup> = 0.91, <i>p</i> < 0.0001). An optimal BPNN model with 2 hidden-layer neuron nodes was established with the same variables (r<sup>2</sup> = 0.93, <i>p</i> < 0.0001). The findings demonstrated that both MLR and BPNN models (<i>p</i> < 0.0001) were suitable for predicting CH<sub>4</sub> production using the Carbs components (CA, CB<sub>1</sub>, CB<sub>2</sub>, CC) of CNCPS. However, compared with the MLR model, the BPNN model has a greater coefficient of determination (r<sup>2</sup>) value and concordance correlation coefficient (CCC), and a lower root mean square prediction error (RMSPE), demonstrating better prediction performance.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656829/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606538","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alejandra Escudero, Maria Puig Ribas, Sonia Almería, Hojjat Gholipour, Lola Pailler-García, Natalia Sastre, Jordi Ruiz-Olmo, Santiago Palazón, Ferran Sayol, Johan Espunyes, Xavier Fernández Aguilar, Oscar Cabezón
Toxoplasma gondii is a protozoan parasite with a complex life cycle that involves warm-blooded animals as intermediate hosts and felids as definitive hosts. Its epidemiology in alpine ecosystems remains poorly understood. This study presents the first long-term investigation of T. gondii exposure in wild ruminants in the Pyrenees (NE Spain), where definitive hosts are scarce. Pyrenean chamois (Rupicapra pyrenaica; n = 1045) and mouflon (Ovis aries musimon; n = 115) sera collected between 2001 and 2024 were tested (Modified Agglutination Test, ELISA-IDvet, ELISA-IDEXX) for the presence of T. gondii antibodies. Sera from 53 chamois and 27 mouflon foetuses and hearts and brains from 38 chamois and 35 mouflon foetuses were analysed for the presence of antibodies and parasite's DNA, respectively. Moreover, heart and brain (n = 3) and faeces (n = 91) from Pyrenean wildcats (Felis silvestris) were analysed for parasite's DNA. Seroprevalence was overall low (chamois: 5.24%; mouflon: 1.74%). In multivariate analyses performed in chamois, seroprevalence variation was mainly associated with geographic origin and the diagnostic method used, with little influence of the individual traits of sex or age. No antibodies or T. gondii DNA were detected in chamois or mouflon foetuses. However, chamois did not show a clear age-related increase in exposure to T. gondii, as would be expected if indirect horizontal transmission were the predominant route. In contrast, T. gondii DNA was detected in brain and faecal samples from wildcats, confirming their role as definitive hosts in this ecosystem. Overall, our results reinforce the hypothesis that alpine ecosystems are environments with low T. gondii oocyst contamination and that the parasite most probably relies on sylvatic cycles. These results suggest that wild ruminants, such as chamois and mouflon, could serve as effective sentinels of changes in the extent of this parasite under ongoing environmental and ecological changes.
刚地弓形虫是一种具有复杂生命周期的原生动物寄生虫,以温血动物为中间宿主,以猫科动物为最终宿主。它在高山生态系统中的流行病学仍然知之甚少。本研究首次对比利牛斯山脉(西班牙东北部)野生反刍动物中弓形虫暴露进行了长期调查,那里的最终宿主很少。采用改良凝集试验(ELISA-IDvet, ELISA-IDEXX)检测2001 - 2024年收集的比利牛斯羚羊(Rupicapra pyrenaica, n = 1045)和羊驼羊(Ovis aries musimon, n = 115)血清中弓形虫抗体的存在。分别分析了53只岩羚羊和27只mouflon胎儿的血清,以及38只岩羚羊和35只mouflon胎儿的心脏和大脑中抗体和寄生虫DNA的存在。此外,对比利牛斯野猫(Felis silvestris)的心脏和大脑(n = 3)和粪便(n = 91)进行了寄生虫DNA分析。血清阳性率总体较低(麂皮:5.24%;摩绒:1.74%)。在对岩羚羊进行的多变量分析中,血清阳性率变化主要与地理来源和使用的诊断方法有关,性别或年龄的个体特征影响不大。在羚羊和摩富龙胎中未检测到抗体和弓形虫DNA。然而,如果间接水平传播是主要途径,那么岩羚羊接触弓形虫并没有显示出明显的与年龄相关的增加。相比之下,在野猫的大脑和粪便样本中检测到弓形虫DNA,证实了它们在该生态系统中作为最终宿主的作用。总的来说,我们的研究结果加强了高山生态系统是弓形虫卵囊污染较低的环境的假设,弓形虫很可能依赖于森林循环。这些结果表明,在持续的环境和生态变化中,野生反刍动物,如岩羚羊和mouflon,可以作为该寄生虫范围变化的有效哨兵。
{"title":"Exposure of Wild Ruminants to <i>Toxoplasma gondii</i> in Alpine Ecosystems, NE Spain.","authors":"Alejandra Escudero, Maria Puig Ribas, Sonia Almería, Hojjat Gholipour, Lola Pailler-García, Natalia Sastre, Jordi Ruiz-Olmo, Santiago Palazón, Ferran Sayol, Johan Espunyes, Xavier Fernández Aguilar, Oscar Cabezón","doi":"10.3390/vetsci12111101","DOIUrl":"10.3390/vetsci12111101","url":null,"abstract":"<p><p><i>Toxoplasma gondii</i> is a protozoan parasite with a complex life cycle that involves warm-blooded animals as intermediate hosts and felids as definitive hosts. Its epidemiology in alpine ecosystems remains poorly understood. This study presents the first long-term investigation of <i>T. gondii</i> exposure in wild ruminants in the Pyrenees (NE Spain), where definitive hosts are scarce. Pyrenean chamois (<i>Rupicapra pyrenaica</i>; n = 1045) and mouflon (<i>Ovis aries musimon</i>; n = 115) sera collected between 2001 and 2024 were tested (Modified Agglutination Test, ELISA-IDvet, ELISA-IDEXX) for the presence of <i>T. gondii</i> antibodies. Sera from 53 chamois and 27 mouflon foetuses and hearts and brains from 38 chamois and 35 mouflon foetuses were analysed for the presence of antibodies and parasite's DNA, respectively. Moreover, heart and brain (n = 3) and faeces (n = 91) from Pyrenean wildcats (<i>Felis silvestris</i>) were analysed for parasite's DNA. Seroprevalence was overall low (chamois: 5.24%; mouflon: 1.74%). In multivariate analyses performed in chamois, seroprevalence variation was mainly associated with geographic origin and the diagnostic method used, with little influence of the individual traits of sex or age. No antibodies or <i>T. gondii</i> DNA were detected in chamois or mouflon foetuses. However, chamois did not show a clear age-related increase in exposure to <i>T. gondii</i>, as would be expected if indirect horizontal transmission were the predominant route. In contrast, <i>T. gondii</i> DNA was detected in brain and faecal samples from wildcats, confirming their role as definitive hosts in this ecosystem. Overall, our results reinforce the hypothesis that alpine ecosystems are environments with low <i>T. gondii</i> oocyst contamination and that the parasite most probably relies on sylvatic cycles. These results suggest that wild ruminants, such as chamois and mouflon, could serve as effective sentinels of changes in the extent of this parasite under ongoing environmental and ecological changes.</p>","PeriodicalId":23694,"journal":{"name":"Veterinary Sciences","volume":"12 11","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12656981/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145606406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}