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2018 IEEE Life Sciences Conference (LSC)最新文献

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The Effect of Signal-to-Noise Ratio on Muscle Synergy Extraction 信噪比对肌肉协同提取的影响
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572075
M. Ghislieri, V. Agostini, M. Knaflitz
The modular organization of the central nervous system (CNS) during motor tasks was widely assessed by means of muscle synergies. The aim of this work was to assess the impact of the Signal-to-Noise Ratio (SNR) on muscle synergies extracted from synthetic surface electromyographic (sEMG) signals that simulate the muscle activity of the lower limb during walking. To evaluate the effect of the SNR, the similarity between the weights vectors and the activation coefficients extracted from real sEMG signals and from simulated sEMG signals at different values of SNR was computed. Results reveal that muscle synergy extraction is strongly dependent upon the quality of the sEMG signals simulated.
在运动任务中,中枢神经系统(CNS)的模块化组织通过肌肉协同作用被广泛评估。这项工作的目的是评估信噪比(SNR)对从模拟行走过程中下肢肌肉活动的合成肌电图(sEMG)信号中提取的肌肉协同作用的影响。为了评估信噪比的效果,计算了在不同信噪比下从真实表面肌电信号和模拟表面肌电信号中提取的权重向量和激活系数之间的相似度。结果表明,肌肉协同提取强烈依赖于模拟的表面肌电信号的质量。
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引用次数: 1
A Virtual-Reality System for Interacting with Three-Dimensional Models Using a Haptic Device and a Head-Mounted Display 使用触觉设备和头戴式显示器与三维模型交互的虚拟现实系统
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572120
Elie Saad, W. Funnell, P. Kry, N. Ventura
Visualizing and simulating the real world by means of three-dimensional (3D) models is important in many fields, especially in science, technology, engineering and medicine (STEM). Exploiting the human senses, such as the sense of sight with head-mounted displays (HMDs) and the sense of touch with haptic devices, has helped in creating immersive virtual-reality (VR) experiences. However, HMDs and haptics have seldom been combined, and recently the technology has been advancing rapidly in both areas. The objective of this research was to develop a VR system which combines both a consumer-level HMD and a mid-level haptic device using a game-development platform. A proof-of-concept system was developed using the Oculus Rift HMD and the Phantom Premium 1.5 High Force haptic device. The system was implemented using the Unity 3D game engine and was tested with two 3D human anatomical models, a heart and part of a skull. The technical performance of the system was evaluated, and a small preliminary user evaluation was performed. Particular challenges and limitations of currently available hardware and software are also discussed.
利用三维模型对现实世界进行可视化和模拟在许多领域都很重要,特别是在科学、技术、工程和医学(STEM)领域。利用人类的感官,如头戴式显示器(hmd)的视觉和触觉设备的触觉,有助于创造沉浸式虚拟现实(VR)体验。然而,hmd和触觉很少结合在一起,最近该技术在这两个领域都得到了迅速的发展。这项研究的目的是开发一个VR系统,它结合了消费者级的头戴式显示器和使用游戏开发平台的中级触觉设备。使用Oculus Rift HMD和Phantom Premium 1.5 High Force触觉设备开发了一个概念验证系统。该系统使用Unity 3D游戏引擎实现,并使用两个3D人体解剖模型(心脏和部分头骨)进行测试。对系统的技术性能进行了评价,并进行了小规模的初步用户评价。还讨论了当前可用的硬件和软件的特殊挑战和限制。
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引用次数: 3
Segmentation of Patient Images in the Neonatal Intensive Care Unit 新生儿重症监护病房患者图像的分割
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572169
Yasmina Souley Dossso, Amente Bekele, Shermeen Nizami, C. Aubertin, K. Greenwood, J. Harrold, J. Green
Detection and segmentation of people within a scene has been primarily applied to indoor imagery for surveillance systems and outdoor scenes for pedestrian detection. This paper proposes to leverage a similar semantic segmentation model for segmenting patients in the neonatal intensive care unit (NICU) during video-based monitoring. This will serve as part of a noncontact, non-invasive and unobtrusive system to monitor neonates by acquiring a relevant region-of-interest from overhead RGB-D video. This paper examines situations typical of the NICU environment to ensure generalization of the solution to all patient scenarios. Transfer learning is applied to a pre-trained convolutional neural network on three different patients. Promising results are observed when the model is tested on a new patient. Final testing accuracy of 93% demonstrates the potential of such algorithm to automatically determine a suitable region-of-interest for video-based patient monitoring.
场景中人物的检测和分割主要应用于监控系统的室内图像和行人检测的室外场景。本文提出利用类似的语义分割模型来分割新生儿重症监护病房(NICU)中基于视频监控的患者。这将作为一个非接触式、非侵入性和不引人注目的系统的一部分,通过从头顶的RGB-D视频中获取相关兴趣区域来监测新生儿。本文考察了NICU环境的典型情况,以确保解决方案适用于所有患者的情况。将迁移学习应用于三个不同患者的预训练卷积神经网络。当该模型在新患者身上进行测试时,观察到有希望的结果。最终测试准确率为93%,这表明该算法具有自动确定适合视频患者监测的兴趣区域的潜力。
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引用次数: 8
Characterizing Antibody-Microsphere Conjugates for Fluorescence-Based Lateral Flow Immunoassays 荧光侧流免疫分析中抗体-微球偶联物的表征
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572152
Meilin Zhu, Ching-Wen Hou, U. Obahiagbon, K. Anderson, J. Christen
Fluorescence- based lateral flow immunoassays (LFIAs) remain relatively unexplored compared to colorimetric LFIAs for point-of-care (PoC) disease diagnosis and health monitoring. For fluorescence-based LFIAs, a major challenge includes the auto-fluorescence of the nitrocellulose and nonspecific binding of fluorescent polystyrene microspheres. In this paper, we aim to characterize antibody-microsphere conjugates in a fluorescence-based serological assay on nitrocellulose. Factors such as coating concentration and quantity of microspheres were considered and their impacts on nonspecific binding and signal-to-noise ratio are discussed. Finally, we use the determined conditions for the antibody-microsphere conjugates to demonstrate the sensitivity of a proof-of-concept assay detecting antibodies to Epstein-Barr Nuclear Antigen-1 in pooled human plasma samples. A titration of the seropositive plasma samples demonstrated a titer approaching 1:1,000 using only 30 μL of diluted sample and a sample-to-result time of less than one hour.
与比色免疫测定法相比,基于荧光的侧流免疫测定法(LFIAs)在护理点(PoC)疾病诊断和健康监测方面仍然相对未被开发。对于基于荧光的LFIAs,主要的挑战包括硝化纤维素的自身荧光和荧光聚苯乙烯微球的非特异性结合。在本文中,我们的目的是表征抗体微球偶联物在基于荧光血清学分析硝基纤维素。考虑了涂层浓度和微球数量等因素对非特异性结合和信噪比的影响。最后,我们使用确定的抗体-微球偶联物的条件来证明概念验证分析在汇集的人类血浆样本中检测爱泼斯坦-巴尔核抗原-1抗体的敏感性。对血清阳性血浆样品的滴定表明,仅用30 μL的稀释样品和不到1小时的样品到结果时间,滴度接近1:10 000。
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引用次数: 0
Analysis of Muscle's Electrical Activity During Dynamic Fatiguing Exercise Using Visibility Graph and Degree Statistics 动态疲劳运动中肌肉电活动的可见性图和度统计分析
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572060
N. Makaram, R. Swaminathan
The reduction in muscle force is a common symptom of several neuromuscular diseases. This phenomenon is called muscle fatigue. In normal subjects, it is generally reversible. Surface electromyography (sEMG) signals are commonly used to analyze muscle fatigue. These signals are nonlinear and nonstationary in nature. In this work, an attempt is made to analyse sEMG signals in nonfatigue and fatigue conditions using the degree distribution of visibility graphs. The sEMG signals are recorded from the upper limb muscle namely the biceps brachii during dynamic contraction with a six-kilogram load. A total of 58 subjects volunteered for the study. The signals are preprocessed, and visibility graphs are constructed. The variation in the degree distribution is studied and characterized. The results indicate that the signals recorded are complex in nature. The degree distributions are distinct between nonfatigue and fatigue conditions. In fatigue, the percentage of higher degree nodes are more. Further, the decay rate of degree is larger in the case of nonfatigue indicating the signal is comparatively random. The statistical test indicates that the features extracted are significant with a $mathbf{p} < mathbf{0.005}$. It appears that this method of analysis would be useful for characterizing various neuromuscular conditions.
肌肉力量的减少是几种神经肌肉疾病的常见症状。这种现象被称为肌肉疲劳。在正常受试者中,它通常是可逆的。表面肌电图(sEMG)信号通常用于分析肌肉疲劳。这些信号本质上是非线性和非平稳的。在这项工作中,尝试使用可见性图的度分布来分析非疲劳和疲劳条件下的表面肌电信号。上肢肌肉即肱二头肌在6公斤负荷下动态收缩时的肌电信号被记录下来。共有58名受试者自愿参加这项研究。对信号进行预处理,构造可见性图。对度分布的变化进行了研究和表征。结果表明,所记录的信号本质上是复杂的。非疲劳状态和疲劳状态的度分布明显不同。在疲劳状态下,高阶节点所占比例较大。此外,在非疲劳情况下,度的衰减率更大,表明信号是相对随机的。统计检验表明,当$mathbf{p} < mathbf{0.005}$时,提取的特征显著。看来,这种分析方法将有助于表征各种神经肌肉状况。
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引用次数: 1
Robust R-Wave Detection Under Long-Term Measurement Using HRV Sensor System with Automatic Gain Readjustment 基于自动增益调节的HRV传感器系统的长期测量鲁棒r波检测
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572058
K. Shoji, T. Yamakawa, T. Sakata, Y. Ueda
A low-cost telemeter has been developed for heart rate variability analysis by using the R-R intervals of an electrocardiogram to detect heart disease. The decreasing detection rate of the R-wave in long-term measurements was attributed to inadequate gain from the electrocardiogram. An automatic gain readjustment function was therefore developed to address this problem. In this study, we evaluated the discrimination rules by using a gain readjustment function and calculated the improvement factor for R-wave detection. The function was installed on an Android smartphone and measured by using 25 healthy subjects. The measurement results showed that the detection rate of the R-wave was improved by 16.3 before and after gain readjustment. Furthermore, the measurement results revealed the need for multiple gain readjustments to ensure the required performance. The gain value was acquired for seven subjects to examine the variation in the electrocardiogram amplitude after 5 and 7 $mathbf{h}$ of measurement. Consequently, the electrocardiogram amplitude did not have adverse effects on the R-wave detection for the duration of these measurements.
一种低成本的遥测仪已经被开发出来,用于心率变异性分析,通过使用心电图的R-R间隔来检测心脏病。长期测量中r波的检出率下降是由于心电图的增益不足。因此,开发了一种自动增益调整功能来解决这个问题。在本研究中,我们使用增益再调整函数来评估识别规则,并计算r波检测的改进因子。该功能安装在安卓智能手机上,并由25名健康受试者进行测量。测量结果表明,增益调整前后,r波的检出率提高了16.3倍。此外,测量结果显示需要多次调整增益以确保所需的性能。获得7名受试者的增益值,以检查测量5和7 $mathbf{h}$后心电图振幅的变化。因此,在这些测量的持续时间内,心电图振幅对r波检测没有不利影响。
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引用次数: 0
A High-Speed Embedded Event Detector for Mobile DNA Sequencing 用于移动DNA测序的高速嵌入式事件检测器
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572143
R. Mittmann, S. Magierowski, A. Refaey, E. Ghafar-Zadeh
DNA sequencing hardware is rapidly evolving into a mobile platform. Hand held technologies are capable of measuring the equivalent of a human genome every hour within a 5 W power window. Rapid event detection, as as a means of feature extraction for downstream processing or rapid pattern classification, is a critical computational function in this domain. The algorithmic and hardware design of an embedded event detector capable of serving in such a capacity is described in this paper. The device achieves a computational efficiency of 5600 MIPS/W while seeking 32 unique signal levels, a performance level capable of processing the equivalent of 1 human genome per hour within a 1 W power budget.
DNA测序硬件正在迅速发展成为一个移动平台。手持技术能够在5w的功率范围内每小时测量一个相当于人类基因组的数据。快速事件检测作为下游处理或快速模式分类的特征提取手段,是该领域的关键计算功能。本文介绍了一种具有这种能力的嵌入式事件检测器的算法和硬件设计。该器件在寻求32个独特信号电平的同时实现了5600 MIPS/W的计算效率,这一性能水平能够在1w功率预算下每小时处理相当于1个人类基因组的数据。
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引用次数: 0
The Use of Heart Rate for the Assessment of Firefighter Resilience: A Literature Review 运用心率评估消防员的应变能力:文献回顾
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572095
Khyati A. Vyas, C. McGregor
Heart rate monitoring of the firefighters have begun to be used for job stress level assessment or firefighting training. However, resilience assessment and heart rate variability monitoring is not widely utilized on firefighters with limited feedback available through wearables. This paper presents an initial exploratory study that considers heart rate responses from firefighters in real life like emergency scenarios.
消防员心率监测已开始用于工作压力水平评估或消防培训。然而,弹性评估和心率变异性监测并没有广泛应用于消防员,通过可穿戴设备获得的反馈有限。本文提出了一项初步的探索性研究,考虑了消防员在现实生活中的心率反应,如紧急情况。
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引用次数: 2
Development of a Rotor-Mapping Algorithm to Locate Ablation Targets During Atrial Fibrillation 房颤消融目标定位转子映射算法的发展
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572271
Prasanth Ganesan, E. Cherry, A. Pertsov, B. Ghoraani
Catheter ablation therapy involving isolation of pulmonary veins (PVs) remains the cornerstone procedure to treat AF. However, due to the sub-optimal success rates of PV isolation, there is a need for new ablation techniques to locate AF ablation targets known as rotors, outside of the PVs. In this paper, we developed a novel rotor-mapping algorithm that uses a conventional diagnostic catheter, Lasso, to locate a rotor source. The algorithm, called the Region of Rotor (ROR) Mapping, utilizes the characteristics of local bipolar electrograms to navigate the catheter's iterative placements while generating a map, overlaid on the atrial anatomy, that displays the potential rotor region. We evaluated the developed ROR mapping algorithm using a 2D simulation of AF on a tissue with heterogeneous conduction properties. The results demonstrated a significant success rate of 93% in accurately locating the region of the rotor with a mean distance of 1.4mm from the ground truth trajectory. The algorithm could play a critical role in mapping non-PV AF ablation targets and improving the outcome of AF ablation.
导管消融治疗包括肺静脉(PV)的隔离仍然是治疗房颤的基础程序。然而,由于PV隔离的次优成功率,需要新的消融技术来定位房颤消融目标,即PV外的转子。在本文中,我们开发了一种新的转子映射算法,该算法使用传统的诊断导管Lasso来定位转子源。该算法被称为转子区域(ROR)映射,利用局部双极电图的特征来导航导管的迭代放置,同时生成覆盖在心房解剖结构上的地图,显示潜在的转子区域。我们使用具有非均匀传导特性的组织上AF的二维模拟来评估开发的ROR映射算法。结果表明,在距离地面真值轨迹平均1.4mm的情况下,准确定位转子区域的成功率为93%。该算法可以在非pv房颤消融目标的定位和改善房颤消融结果中发挥关键作用。
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引用次数: 2
Towards Label-Free Platform for Monitoring Interaction Between Cells and Superparamagnetic Iron Oxide Nanoparticles 建立无标记平台监测细胞与超顺磁性氧化铁纳米颗粒之间的相互作用
Pub Date : 2018-10-01 DOI: 10.1109/LSC.2018.8572102
S. Tan, E. Ghafar-Zadeh, G. Zoidl
Recent advances of Superparamagnetic Iron oxide nanoparticles (SPIONs) for clinical and research applications had triggered the need to understand their effects in cells. Despite of the great advances in adapting various biological and chemical methods to assess in-vitro toxicity of SPIONs, less attention has been paid on the development of high throughput label-free screening platform to study the interaction between the cells and nanoparticles. In this paper, we have taken a first step toward this goal by proposing a label free impedimetric method for monitoring living cells treated with SPIONs. We demonstrate the effect of SPIONs on the adhesion, growth, proliferation and viability of neuroblastoma cells using impedance spectroscopy in comparison to other standard microscopic and cell viability testing methods. We also report how to increase throughput using multiwell cultures. Our results suggest that 10 $mathrm{M}Omega$ impedance change of electrodes exposed to the mixture of cells and SPIONs offer a wide dynamic range suitable for monitoring the effect of SPIONs with a concentration less than $mathbf{100} mu mathbf{g}/mathbf{mL}$.
超顺磁性氧化铁纳米颗粒(SPIONs)在临床和研究方面的最新进展引发了了解其在细胞中的作用的需要。尽管采用各种生物和化学方法来评估SPIONs的体外毒性取得了很大进展,但开发高通量无标记筛选平台来研究细胞与纳米颗粒之间的相互作用却很少受到关注。在本文中,我们通过提出一种无标记阻抗法来监测经SPIONs处理的活细胞,向这一目标迈出了第一步。与其他标准显微镜和细胞活力测试方法相比,我们利用阻抗谱证明了SPIONs对神经母细胞瘤细胞的粘附、生长、增殖和活力的影响。我们还报告了如何使用多孔培养提高产量。我们的研究结果表明,10 $mathrm{M}Omega$电极暴露于细胞和SPIONs混合物的阻抗变化提供了一个宽的动态范围,适合于监测浓度小于$mathbf{100} mu mathbf{g}/mathbf{mL}$的SPIONs的效果。
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引用次数: 0
期刊
2018 IEEE Life Sciences Conference (LSC)
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