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Design, synthesis, and evaluation of antipyrine and nicotinic acid derivatives as anti-inflammatory agents: in vitro and in vivo studies 安替比林和烟酸衍生物作为抗炎剂的设计、合成和评价:体外和体内研究。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-10 DOI: 10.1016/j.bmc.2025.118439
Rasha A. Hassan , Soha H. Emam , Demiana S. Mikhail , Soha O. Hassanin , Mona G. Khalil , Amr M. Abdou , Eman O. Osman
A series of new antipyrine and nicotinic acid-based scaffolds were synthesized and evaluated for their inhibitory activity against cyclooxygenase-1 and cyclooxygenase-2, using indomethacin and celecoxib as reference drugs. Among the synthesized compounds, 4d and 6b demonstrated the most potent COX-2 inhibition, exhibiting IC50 values of 0.940 ± 0.05 μM and 0.614 ± 0.03 μM, respectively, in comparison to celecoxib (IC50 = 0.844 ± 0.04 μM). Compound 4d displayed the highest COX-2 selectivity index (SI = 13.57), surpassing that of celecoxib (SI = 7.92), thereby indicating superior COX-2 selectivity. Consequently, the in vivo anti-inflammatory activity of compound 4d was comparable to that of indomethacin. Compound 4d significantly reduced paw edema, achieving edema inhibition percentages of 14.75 %, 30.77 %, and 45.33 % at the first, second, and third hours, respectively. In contrast, celecoxib exhibited the most pronounced anti-inflammatory effect, achieving edema inhibition percentages of 59.02 %, 69.23 %, and 78.67 % at the corresponding time points. Histopathological examination confirmed the absence of gastric ulceration following oral administration of compound 4d. Furthermore, it effectively lowered serum levels of prostaglandin E2 and interleukin-1β. To elucidate its selectivity and binding affinity, molecular docking of compound 4d into the COX-2 active site was conducted, revealing favorable interactions consistent with its biological activity. Collectively, these findings identify compound 4d, an antipyrine–urea hybrid with para-Cl and meta-CF3 substitutions, as a useful lead scaffold for effective, safe, and selective COX-2 inhibitors.
以吲哚美辛和塞来昔布为对照药物,合成了一系列新的安替比林和烟酸基支架,并对其对环氧化酶-1和环氧化酶-2的抑制活性进行了评价。合成的化合物中,4d和6b对COX-2的抑制作用最强,IC50值分别为0.940±0.05 μM和0.614±0.03 μM,而塞来昔布的IC50值为0.844±0.04 μM。化合物4d显示出最高的COX-2选择性指数(SI = 13.57),超过塞来昔布(SI = 7.92),表明具有较好的COX-2选择性。因此,化合物4d的体内抗炎活性与吲哚美辛相当。化合物4d显著降低足跖水肿,在第1小时、第2小时和第3小时的水肿抑制率分别为14.75%、30.77%和45.33%。相比之下,塞来昔布表现出最明显的抗炎作用,在相应的时间点,水肿抑制率分别为59.02%、69.23%和78.67%。经组织病理学检查证实,口服复方4d后未见胃溃疡。此外,它还能有效降低血清中前列腺素E2和白细胞介素-1β的水平。为了阐明其选择性和结合亲和力,我们将化合物4d与COX-2活性位点进行了分子对接,揭示了与其生物活性相一致的良好相互作用。总的来说,这些发现确定了化合物4d,安替吡林-尿素杂化物与对氯和间cf3取代物,作为有效,安全和选择性COX-2抑制剂的有用铅支架。
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引用次数: 0
Helix stabilization by i,i + 7 amine-containing hydrocarbon Staples: Effects of length, stereochemistry, and orientation i,i + 7含胺烃类主食的螺旋稳定性:长度、立体化学和取向的影响。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-12 DOI: 10.1016/j.bmc.2025.118443
Ha T.N. Nguyen , Su-Yeon Lee , Duc V.H. Tran , Young-Woo Kim
We previously introduced the i,i + 4 amine-containing hydrocarbon (ACH) stapling system as a helix-stabilizing alternative to conventional all-hydrocarbon (AHC) staples, offering improved aqueous compatibility and chemical tunability. Here, we extend this approach to the i,i + 7 topology, which spans two helical turns and enables long-range conformational control. Systematic variation of cross-link length, stereochemistry, and orientation identified a 13-atom butylaminoalkenyl tether with SS configuration as the most effective helix-stabilizing i,i + 7 ACH staple. Notably, orientation reversal substantially enhanced helicity relative to the canonical arrangement, and this effect proved transferable across helical registers. Furthermore, the orientation-optimized staple not only reinforced α-helical conformation but also conferred significant proteolytic resistance, thereby revealing a direct link between structural preorganization and biochemical resilience. Taken together with earlier i,i + 4 variants, i,i + 7 ACH staples constitute a coherent design platform that expands the chemical and functional space of peptide stapling, with broad implications for structurally reinforced, therapeutically relevant α-helical peptides.
我们之前介绍过i,i + 4含胺烃(ACH)钉接系统,作为传统全烃(AHC)钉接器的螺旋稳定替代品,具有更好的水相容性和化学可调性。在这里,我们将这种方法扩展到i,i + 7拓扑结构,它跨越了两个螺旋转弯,并实现了远程构象控制。通过对交联长度、立体化学和取向的系统性变化,鉴定出具有SS构型的13原子丁胺烯基系链是最有效的稳定螺旋的i,i + 7 ACH短钉。值得注意的是,相对于规范排列,取向反转大大增强了螺旋度,并且这种效应被证明可以在螺旋寄存器中转移。此外,定向优化的短纤维不仅增强了α-螺旋构象,而且具有显著的蛋白水解抗性,从而揭示了结构预组织与生化弹性之间的直接联系。与早期的i,i + 4变体,i,i + 7 ACH钉一起构成了一个连贯的设计平台,扩展了肽钉的化学和功能空间,对结构增强,治疗相关的α-螺旋肽具有广泛的意义。
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引用次数: 0
Novel trifluoromethylquinoline derivatives as potent tubulin polymerization inhibitors with antitumor activity 新型三氟甲基喹啉衍生物具有抗肿瘤活性的微管蛋白聚合抑制剂。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-02 DOI: 10.1016/j.bmc.2025.118472
Mengsha Mao , Liangliang Hu , Xiangkai Kong , Shijiao Wei , Ping Yi , Gang Yu , Guangcan Xu , Jia Yu , Sha Cheng , Xiaoping Zeng , Kun Liu , Bixue Xu , Heng Luo , Xueling Meng
Herein, two series of N-aryl-2-trifluoromethyl-quinoline-4-amine derivatives as tubulin polymerization inhibitors were designed and synthesized. Compounds 14b exhibited potency inhibitory activity against LNCaP cells (IC50 = 0.0027 μM and Selectivity Index = 4.07) which was more effective than the positive control colchicine, while compounds 12, 16a, and 14e exhibited moderate activity against LNCaP cells with IC50 values of 0.28, 0.0413, and 0.43 μM, respectively. Moreover, mechanism studies showed that 14b could disrupt tubulin polymerization effectively, block cell cycle in G2/M phase, and induced cellular apoptosis. 14b significantly inhibited LNCaP cell migration and invasion. Meanwhile, SwissADME predictions showed that 14b has good pharmacokinetic properties and molecular docking confirmed that it may bind to the colchicine binding site. In brief, these data suggested that 14b was a promising lead compound with antitumor activity for discovering novel tubulin polymerization inhibitors.
本文设计并合成了两个系列的n -芳基-2-三氟甲基-喹啉-4-胺衍生物作为微管蛋白聚合抑制剂。化合物14b对LNCaP细胞表现出较强的抑制活性(IC50值为0.0027 μM,选择性指数为4.07),优于阳性对照秋水草碱;化合物12、16a和14e对LNCaP细胞表现出中等抑制活性,IC50值分别为0.28、0.0413和0.43 μM。机制研究表明,14b能有效破坏微管蛋白聚合,阻断细胞G2/M期周期,诱导细胞凋亡。14b显著抑制LNCaP细胞的迁移和侵袭。同时,SwissADME预测显示14b具有良好的药代动力学性质,分子对接证实其可能结合秋水仙碱结合位点。总之,这些数据表明,14b是一种具有抗肿瘤活性的先导化合物,可以发现新的微管蛋白聚合抑制剂。
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引用次数: 0
Synthesis and degradation effect of PROTACs targeting EGFR triple mutants 靶向EGFR三突变体的PROTACs的合成及降解作用
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-06 DOI: 10.1016/j.bmc.2025.118427
Xiao-Xiao Xi, Hong-Yi Zhao, Minhang Xin, Shuai Mao, San-Qi Zhang
Drug resistance caused by epidermal growth factor receptor (EGFR) mutation has significantly limited the clinical efficacy of EGFR tyrosine kinase inhibitors (EGFR-TKIs). In this study, we selected fourth-generation EGFR-TKIs (compounds A, B, and C) and EGFR-TKI D as ligands for EGFR, along with VHL-L1 and VHL-L2 as ligands for the E3 ligase, using acyl linkers to design novel PROTACs targeting EGFR triple mutants. We synthesized and evaluated compounds EP1–EP12. Among them, EP7, EP8, EP9, EP11 and EP12 exhibited potent antiproliferative activities against cells expressing EGFR mutants. Notably, EP9 and EP12 effectively induced the degradation of EGFR triple mutants (EGFRDel19/T790M/C797S and EGFRL858R/T790M/C797S) and significantly suppressed EGFR pathway signal transduction. Mechanism studies revealed that the degradation process requires the formation of ternary complexes and the ubiquitination of the EGFR protein, with the degradation being associated with lysosomal activity. In conclusion, compounds EP9 and EP12 were identified as potent degraders of EGFR triple mutants, offering new insights into the development of PROTACs for targeting these mutations.
表皮生长因子受体(EGFR)突变引起的耐药严重限制了EGFR酪氨酸激酶抑制剂(EGFR- tkis)的临床疗效。在这项研究中,我们选择了第四代EGFR- tkis(化合物A、B和C)和EGFR- tki D作为EGFR的配体,以及VHL-L1和VHL-L2作为E3连接酶的配体,使用酰基连接体设计了针对EGFR三突变体的新型PROTACs。我们合成并评价了化合物EP1-EP12。其中,EP7、EP8、EP9、EP11和EP12对表达EGFR突变体的细胞表现出较强的抗增殖活性。值得注意的是,EP9和EP12有效诱导EGFR三突变体(EGFRDel19/T790M/C797S和EGFRL858R/T790M/C797S)降解,并显著抑制EGFR通路信号转导。机制研究表明,降解过程需要三元复合物的形成和EGFR蛋白的泛素化,降解与溶酶体活性有关。总之,化合物EP9和EP12被鉴定为EGFR三突变体的有效降解剂,为开发针对这些突变的PROTACs提供了新的见解。
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引用次数: 0
Discovery of novel 20S proteasome activators for hypoxic cardiomyocyte protection via endoplasmic reticulum stress alleviation 发现新的20S蛋白酶体激活剂通过内质网应激减轻对缺氧心肌细胞的保护。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-21 DOI: 10.1016/j.bmc.2025.118452
Dan Wu , Yu Cao , Yubing Han , Linhao Xu , Han Han , Yaoli Shi , Jiayi Ma , Qingyi Wang , Lixin Gao , Mingzhi Wang , Jianjun Xi , Jingjing Sun , Huajian Zhu , Jiaan Shao , Bin Ju , Yizhou Xu , Yubo Zhou , Jiankang Zhang
Under hypoxic stress, cardiomyocytes predominantly depend on 20S proteasome-mediated degradation to clear accumulated and misfolded proteins. The resultant proteotoxic stress from impaired protein homeostasis contributes significantly to the pathogenesis of cardiovascular disorders. Pharmacological enhancement of 20S proteasome activity thus represents a novel therapeutic paradigm for ischemic cardiomyopathy by restoring proteostasis in myocardial cells. In this study, the hit compound X-1 was identified through screening of proteasome activation profile. Subsequent structure-activity relationship optimization yielded a series of highly potent activators. Intracellular protein degradation assessment revealed that these compounds possessed abilities to alleviate endoplasmic reticulum stress, as demonstrated by the luciferase reporter system. Additionally, selected compound B3 exhibited superior cytoprotection, increasing viability of hypoxia-injured cardiomyocytes while downregulating ER stress markers CHOP and Grp78 at the protein level. AlphaFold3-predicted binding modes and 100 ns molecular dynamics simulations revealing its stabilization of the α region to induce proteasome gate opening, thereby establishing a structure-function rationale for its 20S activation mechanism.
在缺氧应激下,心肌细胞主要依靠20S蛋白酶体介导的降解来清除积累和错误折叠的蛋白质。蛋白质稳态受损导致的蛋白质毒性应激在心血管疾病的发病机制中起着重要作用。因此,通过药物增强20S蛋白酶体活性来恢复心肌细胞的蛋白质平衡,代表了缺血性心肌病的一种新的治疗模式。在本研究中,通过筛选蛋白酶体激活谱,确定了hit化合物X-1。随后的构效关系优化产生了一系列高效活化剂。细胞内蛋白质降解评估显示,这些化合物具有减轻内质网应激的能力,正如荧光素酶报告系统所证明的那样。此外,所选化合物B3表现出优异的细胞保护作用,增加缺氧损伤心肌细胞的活力,同时在蛋白水平上下调内质网应激标志物CHOP和Grp78。alphafold3预测了结合模式和100 ns分子动力学模拟,揭示了其稳定α区诱导蛋白酶体门打开,从而为其20S激活机制建立了结构-功能理论基础。
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引用次数: 0
Synthesis of Psidium meroterpenoids with anti-hepatocellular carcinoma activities 具有抗肝癌活性的Psidium - meroter萜类化合物的合成。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-14 DOI: 10.1016/j.bmc.2025.118481
Zhuo Wang , Chunngai Hui
Liver cancer presents as a significant human disease, and hepatocellular carcinoma appears as the most common form of liver cancer. Several therapeutic agents, such as sorafenib, are currently in Phase III clinical trials for the treatment of liver cancer. However, the development of potent and effective pharmaceuticals is undoubtedly crucial to managing the status of liver cancer and improving the quality of life of patients. Psidium meroterpenoids are natural products isolated from the leaves of Psidium guajava L., exhibiting potent cytotoxicity to hepatocellular carcinoma cell lines. Being synthetically accessible, Psidium meroterpenoids show tremendous potential as a therapeutic agent for hepatocellular carcinoma. This perspective outlines the biological profile, biosynthetic pathway, and chemical synthesis of Psidium meroterpenoids, as well as future directions and opportunities.
肝癌是一种重要的人类疾病,肝细胞癌是最常见的肝癌。几种治疗药物,如索拉非尼,目前正处于肝癌治疗的III期临床试验中。然而,开发有效的药物对于控制肝癌的病情和提高患者的生活质量无疑是至关重要的。番石榴叶子桃萜类化合物是从番石榴叶子桃叶中分离得到的天然产物,对肝癌细胞具有很强的细胞毒性。Psidium - meroterpenoids是一种易于合成的药物,作为肝细胞癌的治疗剂显示出巨大的潜力。本文概述了Psidium meroterpenoids的生物学概况、生物合成途径和化学合成,以及未来的发展方向和机遇。
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引用次数: 0
D-DARTS: an alternative method for NaV1.5 affinity molecules identification based on dual-drug affinity responsive target stability d - dart:一种基于双药亲和反应靶标稳定性的NaV1.5亲和分子鉴定替代方法。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-09 DOI: 10.1016/j.bmc.2025.118436
Zirui Lü, Xiandong Dai, Huixia Li, Cunlin Wang, Fanhua Meng
Drug affinity responsive target stability (DARTS) is a powerful label-free technique for detecting target engagement by measuring the increased resistance of a protein to proteolytic degradation upon ligand binding. However, its application to multi-transmembrane channel proteins has been limited due to their intrinsic structural instability and general resistance to protease digestion. To address this challenge, we developed a novel strategy termed Dual-DARTS (D-DARTS), which employs controlled proteolysis in an SDS-containing denaturing buffer to evaluate a target protein's dual stability—namely, resistance to both chemical denaturation and enzymatic degradation. Using this approach, we successfully identified affinity ligands for the NaV1.5 channel, including both inhibitors and agonists. Notably, D-DARTS enabled the discovery of poneratoxin, a peptide derived from bullet ants, as a high-affinity binder to NaV1.5, a finding validated through electrophysiological assays. Preliminary molecular docking analyses suggested that poneratoxin binds to an epitope analogous to that of the alkaloid agonist BTXB. The general utility of the D-DARTS method was further corroborated by its successful application to the mitochondrial membrane protein VDAC1. By enabling target profiling based on binding affinity rather than functional activity, D-DARTS provides a complementary alternative to electrophysiology-based screening for NaV1.5 channel binders, with advantages including operational simplicity, cost-efficiency, and reduced reliance on specialized equipment. This strategy is anticipated to be applicable to target identification and active molecule screening for a wide range of channel proteins and other multi-transmembrane proteins.
药物亲和反应性靶标稳定性(dart)是一种强大的无标记技术,通过测量配体结合后蛋白质对蛋白水解降解的抗性增加来检测靶标接合。然而,由于其固有的结构不稳定性和对蛋白酶消化的普遍抗性,其在多跨膜通道蛋白中的应用受到限制。为了应对这一挑战,我们开发了一种名为dual - darts (D-DARTS)的新策略,该策略在含有sds的变性缓冲液中控制蛋白质水解,以评估目标蛋白质的双重稳定性,即对化学变性和酶降解的抗性。使用这种方法,我们成功地鉴定了NaV1.5通道的亲和配体,包括抑制剂和激动剂。值得注意的是,d - dart发现了poneratoxin,一种来自子弹蚁的肽,作为NaV1.5的高亲和力粘合剂,这一发现通过电生理分析得到了验证。初步的分子对接分析表明,poneratoxin结合一个类似于生物碱激动剂BTXB的表位。D-DARTS方法在线粒体膜蛋白VDAC1上的成功应用进一步证实了它的普遍实用性。通过基于结合亲和力而非功能活性的靶标分析,d - dart为基于电生理的NaV1.5通道结合物筛选提供了一种补充选择,其优点包括操作简单、成本效益高,并且减少了对专用设备的依赖。该方法有望应用于多种通道蛋白和其他多跨膜蛋白的靶标鉴定和活性分子筛选。
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引用次数: 0
Tissue transglutaminase inhibitors over the past decade 组织转谷氨酰胺酶抑制剂的研究。
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-11-03 DOI: 10.1016/j.bmc.2025.118476
Brianna Ryan , Sarah Tribe , Jeffrey W. Keillor
Tissue transglutaminase (TG2) is a multifunctional protein that functions as a protein cross-linking enzyme and also as an intracellular G-protein. It has been implicated in numerous disorders such as celiac disease, fibrosis and different cancers. Due to these diverse pathologies, there is a need to develop a range of inhibitors that can target the different functionalities of TG2. In this review, we present the latest inhibitors published over the past decade, specifically focussing on irreversible inhibitors (peptidomimetic and small-molecule), probes, and reversible inhibitors.
组织转谷氨酰胺酶(Tissue transglutaminase, TG2)是一种多功能蛋白,具有蛋白质交联酶和细胞内g蛋白的功能。它与许多疾病有关,如乳糜泻、纤维化和不同的癌症。由于这些不同的病理,有必要开发一系列的抑制剂,可以针对TG2的不同功能。在这篇综述中,我们介绍了过去十年中发表的最新抑制剂,特别关注不可逆抑制剂(拟肽和小分子)、探针和可逆抑制剂。
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引用次数: 0
Pharmacophore-based high-throughput virtual screening (HTVS) to identify new c-Src kinase inhibitors with anticancer potential 基于药物载体的高通量虚拟筛选(HTVS)鉴定具有抗癌潜力的新型c-Src激酶抑制剂
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-25 DOI: 10.1016/j.bmc.2025.118451
Ali M. Alaseem , Summya Rashid , J. Puneetha , M. Arockia Babu , Glowi Alasiri , Thakur Gurjeet Singh , Yogita Tyagi , Mohammad Suhail Akhter , Anand Mohan Singh , Nisha Bansal
c-Src is the non-receptor kinase commonly overexpressed in numerous cancer isoforms. As potential anticancer target, these receptors are difficult to target with drugs because of their continuous shuttling between cellular and nuclear compartments and role in relaying of vital signals for gene expression, cell growth, and survival. Besides this high structural homology to other kinases, the involvement of compensatory pathways and the availability of multiple domains within the same proteins further complicate the targeting by drugs. The toxicity and resistance issue with the handful of c-Src inhibitors available, which are again non-selective in approach, further complicate this process. Considering the gap, we employed a drug identification strategy for a plausible c-Src inhibition and its anticancer potential. We selected 500,000 small molecules from the ChemBridge commercial library (database) for the virtual screening. These molecules were filtered via the development of a pharmacophore model, in silico pharmacokinetics (ADME) analysis, and high-throughput virtual screening (HTVS). The top-ranked molecules based on the docking scores, which represent computational binding affinity between a protein and a ligand, were selected and eventually led to 29 best docked molecules. The visual inspection further resulted in refinement of 4 molecules (5280699, 9797370, 11200016, and 71736582), demonstrating protein–ligand interactions the most at the c-Src kinase binding site. To validate their optimal binding, we carried out 200 ns MD simulations on these four selected proteins–ligand complexes. MD analysis revealed that the inhibitors 11200016 and 71736582 were found to be exceptionally stable at the c-Src kinase binding site, meeting the essential prerequisite. The top hit, 71736582, was further corroborated biologically. 71736582 portrayed excellent anticancer potential towards various cancer cell lines (A549, MDAMB-231, HCT-116, DU-145, and PC-3). It was found to inhibit the c-Src-mediated kinase activity (IC50: 517 nM) in comparison to the positive control, bosutinib (IC50: 408 nM). The compound was also able to increase the oxidative stress and induce apoptosis in the colorectal cancer cells employed. The study thus may pave the way for exploration of the top identified ligands further to develop and establish their potential as c-Src kinase inhibitors with anticancer potential.
c-Src是一种非受体激酶,在许多癌症亚型中普遍过表达。这些受体作为潜在的抗癌靶点,由于它们在细胞和核间室之间不断穿梭,并且在基因表达、细胞生长和生存的重要信号传递中起着重要作用,因此很难用药物靶向。除了与其他激酶的高度结构同源性外,代偿途径的参与和同一蛋白质内多个结构域的可用性进一步使药物靶向复杂化。少数可用的c-Src抑制剂的毒性和耐药性问题,在方法上也是非选择性的,使这一过程进一步复杂化。考虑到这一差距,我们采用了一种药物鉴定策略来研究c-Src抑制及其抗癌潜力。我们从ChemBridge商业文库(数据库)中选择了50万个小分子进行虚拟筛选。这些分子通过药效团模型的开发、计算机药代动力学(ADME)分析和高通量虚拟筛选(HTVS)进行过滤。根据对接分数(代表蛋白质与配体之间的计算结合亲和力),选择排名靠前的分子,最终得到29个最佳对接分子。目视检查进一步确定了4个分子(5280699,9797370,11200016和71736582),表明蛋白质与配体的相互作用在c-Src激酶结合位点最多。为了验证它们的最佳结合,我们对这四种选定的蛋白质-配体复合物进行了200 ns MD模拟。MD分析显示,抑制剂11200016和71736582在c-Src激酶结合位点异常稳定,满足了必要的先决条件。最高的是71736582,生物学上进一步证实了这一点。71736582对多种癌细胞系(A549、MDAMB-231、HCT-116、DU-145和PC-3)表现出良好的抗癌潜力。与阳性对照博舒替尼(IC50: 408 nM)相比,发现其抑制c- src介导的激酶活性(IC50: 517 nM)。该化合物还能增加结直肠癌细胞的氧化应激并诱导细胞凋亡。因此,该研究可能为进一步探索顶端鉴定的配体铺平道路,以开发和确立其作为具有抗癌潜力的c-Src激酶抑制剂的潜力。
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引用次数: 0
Discovery, SAR, and molecular basis of (R)-1-((3R,4S)-3-((dimethylamino)methyl)-4-hydroxy-4-(3-methoxyphenyl)piperidin-1-yl)-3-(3-fluorophenyl)-2-methylpropan-1-one as a novel potent analgesic 新型强效镇痛药(R)-1-((3R,4S)-3-((二甲氨基)甲基)-4-羟基-4-(3-甲氧基苯基)哌啶-1-基)-3-(3-氟苯基)-2-甲基丙烯-1-one的发现、合成反应及其分子基础
IF 3 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-10-30 DOI: 10.1016/j.bmc.2025.118474
Xiaodi Xu , Haoran Zhu , Qingbo Shao , Baiyu Chen , Jing Lin , Yang Gao , Zhenzhou He , Wei Fu , Wei Li
Opioid analgesics remain a cornerstone of pain management, among which μ-opioid receptor (MOR) agonists dominate clinical practice due to their well-established efficacy. However, dose related adverse effects (e.g., respiratory depression, addiction potential) constrain their therapeutic utility, driving sustained efforts to develop novel MOR agonists with improved safety profiles. Building upon our previously identified lead compound FWB2, a series of 3-((dimethylamino)methyl)-4-(3-methoxyphenyl)piperidin-4-ol derivatives was designed via structure-based drug design (SBDD), synthesized, and systematically evaluated through comprehensive in vitro and in vivo pharmacological profiling. Systematic structure-activity relationship (SAR) exploration identified (R, (3R,4S))-6c as a novel and selective MOR agonist (MOR Ki = 0.9 nM, MOR: DOR: KOR = 1: 561.1: 188.3; MOR EC50 = 89.9 nM), demonstrating potent antinociceptive activity (ED50 = 1.63 mg/kg) in the hot plate model. Molecular docking studies elucidated the binding mode of (R,(3R,4S))-6c with the MOR, identifying its molecular interactions with four critical residues W3187.35, D1473.32, H54 and W2936.48, while delineating the structural features of the ligand-receptor binding pocket.
阿片类镇痛药仍然是疼痛治疗的基石,其中μ-阿片受体(MOR)激动剂因其公认的疗效而在临床应用中占主导地位。然而,剂量相关的副作用(如呼吸抑制、成瘾性)限制了它们的治疗效用,促使人们持续努力开发具有更高安全性的新型MOR激动剂。以我们先前鉴定的先导化合物FWB2为基础,通过基于结构的药物设计(SBDD)设计了一系列3-((二甲氨基)甲基)-4-(3-甲氧基苯基)哌啶-4-醇衍生物,进行了合成,并通过全面的体外和体内药理学分析进行了系统评估。系统构效关系(SAR)探索发现(R, (3R,4S))-6c是一种新型的选择性MOR激动剂(MOR Ki = 0.9 nM, MOR: DOR: KOR = 1:56 61.1: 188.3; MOR EC50 = 89.9 nM),在热板模型中显示出强大的抗伤感受活性(ED50 = 1.63 mg/kg)。分子对接研究阐明了(R,(3R,4S))-6c与MOR的结合模式,鉴定了其与四个关键残基W3187.35、D1473.32、H54和W2936.48的分子相互作用,同时描绘了配体-受体结合袋的结构特征。
{"title":"Discovery, SAR, and molecular basis of (R)-1-((3R,4S)-3-((dimethylamino)methyl)-4-hydroxy-4-(3-methoxyphenyl)piperidin-1-yl)-3-(3-fluorophenyl)-2-methylpropan-1-one as a novel potent analgesic","authors":"Xiaodi Xu ,&nbsp;Haoran Zhu ,&nbsp;Qingbo Shao ,&nbsp;Baiyu Chen ,&nbsp;Jing Lin ,&nbsp;Yang Gao ,&nbsp;Zhenzhou He ,&nbsp;Wei Fu ,&nbsp;Wei Li","doi":"10.1016/j.bmc.2025.118474","DOIUrl":"10.1016/j.bmc.2025.118474","url":null,"abstract":"<div><div>Opioid analgesics remain a cornerstone of pain management, among which μ-opioid receptor (MOR) agonists dominate clinical practice due to their well-established efficacy. However, dose related adverse effects (<em>e.g.</em>, respiratory depression, addiction potential) constrain their therapeutic utility, driving sustained efforts to develop novel MOR agonists with improved safety profiles. Building upon our previously identified lead compound <strong>FWB2</strong>, a series of 3-((dimethylamino)methyl)-4-(3-methoxyphenyl)piperidin-4-ol derivatives was designed <em>via</em> structure-based drug design (SBDD), synthesized, and systematically evaluated through comprehensive <em>in vitro</em> and <em>in vivo</em> pharmacological profiling. Systematic structure-activity relationship (SAR) exploration identified (<em>R,</em> (3<em>R,</em>4<em>S</em>))-<strong>6c</strong> as a novel and selective MOR agonist (MOR <em>K</em><sub><em>i</em></sub> = 0.9 nM, MOR: DOR: KOR = 1: 561.1: 188.3; MOR EC<sub>50</sub> = 89.9 nM), demonstrating potent antinociceptive activity (ED<sub>50</sub> = 1.63 mg/kg) in the hot plate model. Molecular docking studies elucidated the binding mode of (<em>R,</em>(3<em>R,</em>4<em>S</em>))-<strong>6c</strong> with the MOR, identifying its molecular interactions with four critical residues W318<sup>7.35</sup>, D147<sup>3.32</sup>, H54 and W293<sup>6.48</sup>, while delineating the structural features of the ligand-receptor binding pocket.</div></div>","PeriodicalId":255,"journal":{"name":"Bioorganic & Medicinal Chemistry","volume":"132 ","pages":"Article 118474"},"PeriodicalIF":3.0,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145450274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Bioorganic & Medicinal Chemistry
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