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Computational analysis of variability and uncertainty in the clinical reference on magnetic resonance imaging radiomics: modelling and performance. 磁共振成像放射组学临床参考文献中变异性和不确定性的计算分析:建模与性能。
IF 3.2 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-11-19 DOI: 10.1186/s42492-024-00180-9
Cindy Xue, Jing Yuan, Gladys G Lo, Darren M C Poon, Winnie Cw Chu

To conduct a computational investigation to explore the influence of clinical reference uncertainty on magnetic resonance imaging (MRI) radiomics feature selection, modelling, and performance. This study used two sets of publicly available prostate cancer MRI = radiomics data (Dataset 1: n = 260; Dataset 2: n = 100) with Gleason score clinical references. Each dataset was divided into training and holdout testing datasets at a ratio of 7:3 and analysed independently. The clinical references of the training set were permuted at different levels (increments of 5%) and repeated 20 times. Four feature selection algorithms and two classifiers were used to construct the models. Cross-validation was employed for training, while a separate hold-out testing set was used for evaluation. The Jaccard similarity coefficient was used to evaluate feature selection, while the area under the curve (AUC) and accuracy were used to assess model performance. An analysis of variance test with Bonferroni correction was conducted to compare the metrics of each model. The consistency of the feature selection performance decreased substantially with the clinical reference permutation. AUCs of the trained models with permutation particularly after 20% were significantly lower (Dataset 1 (with ≥ 20% permutation): 0.67, and Dataset 2 (≥ 20% permutation): 0.74), compared to the AUC of models without permutation (Dataset 1: 0.94, Dataset 2: 0.97). The performances of the models were also associated with larger uncertainties and an increasing number of permuted clinical references. Clinical reference uncertainty can substantially influence MRI radiomic feature selection and modelling. The high accuracy of clinical references should be helpful in building reliable and robust radiomic models. Careful interpretation of the model performance is necessary, particularly for high-dimensional data.

进行计算研究,探索临床参考不确定性对磁共振成像(MRI)放射组学特征选择、建模和性能的影响。本研究使用了两组公开的前列腺癌磁共振成像 = 放射组学数据(数据集 1:n = 260;数据集 2:n = 100),其中包含格里森评分临床参考值。每个数据集按 7:3 的比例分为训练数据集和暂停测试数据集,并进行独立分析。训练集的临床参考资料按不同级别(增量为 5%)进行置换,并重复 20 次。在构建模型时使用了四种特征选择算法和两种分类器。训练时采用交叉验证,评估时则使用单独的保留测试集。Jaccard 相似系数用于评估特征选择,而曲线下面积(AUC)和准确率则用于评估模型性能。对每个模型的指标进行了带 Bonferroni 校正的方差分析测试比较。特征选择性能的一致性随着临床参照排列的增加而大大降低。经过训练的模型的AUCs,尤其是20%以后的包被率明显降低(数据集1(包被率≥20%):0.67;数据集2(包被率≥20%):0.67):0.67,数据集 2(≥ 20% 变异):0.74):数据集 1:0.94;数据集 2:0.97)。模型的性能还与不确定性的增大和置换临床参考文献数量的增加有关。临床参考文献的不确定性会严重影响磁共振成像放射学特征选择和建模。临床参考文献的高准确性应有助于建立可靠、稳健的放射学模型。有必要对模型性能进行仔细解读,尤其是高维数据。
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引用次数: 0
Survey of real-time brainmedia in artistic exploration. 艺术探索中的实时脑媒体调查。
IF 3.2 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2024-11-18 DOI: 10.1186/s42492-024-00179-2
Rem RunGu Lin, Kang Zhang

This survey examines the evolution and impact of real-time brainmedia on artistic exploration, contextualizing developments within a historical framework. To enhance knowledge on the entanglement between the brain, mind, and body in an increasingly mediated world, this work defines a clear scope at the intersection of bio art and interactive art, concentrating on real-time brainmedia artworks developed in the 21st century. It proposes a set of criteria and a taxonomy based on historical notions, interaction dynamics, and media art representations. The goal is to provide a comprehensive overview of real-time brainmedia, setting the stage for future explorations of new paradigms in communication between humans, machines, and the environment.

本调查研究了实时脑媒体的演变及其对艺术探索的影响,并在历史框架内对其发展进行了梳理。为了增进人们对日益媒介化的世界中大脑、心灵和身体之间的纠葛的了解,这项工作在生物艺术和互动艺术的交叉点上界定了一个明确的范围,集中研究 21 世纪开发的实时脑媒体艺术作品。它根据历史概念、互动动态和媒体艺术表现形式,提出了一套标准和分类法。其目的是对实时脑媒体进行全面概述,为未来探索人类、机器和环境之间交流的新范式奠定基础。
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引用次数: 0
Application and prospects of AI-based radiomics in ultrasound diagnosis. 基于人工智能的放射组学在超声诊断中的应用与展望。
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-10-13 DOI: 10.1186/s42492-023-00147-2
Haoyan Zhang, Zheling Meng, Jinyu Ru, Yaqing Meng, Kun Wang

Artificial intelligence (AI)-based radiomics has attracted considerable research attention in the field of medical imaging, including ultrasound diagnosis. Ultrasound imaging has unique advantages such as high temporal resolution, low cost, and no radiation exposure. This renders it a preferred imaging modality for several clinical scenarios. This review includes a detailed introduction to imaging modalities, including Brightness-mode ultrasound, color Doppler flow imaging, ultrasound elastography, contrast-enhanced ultrasound, and multi-modal fusion analysis. It provides an overview of the current status and prospects of AI-based radiomics in ultrasound diagnosis, highlighting the application of AI-based radiomics to static ultrasound images, dynamic ultrasound videos, and multi-modal ultrasound fusion analysis.

基于人工智能的放射组学在包括超声诊断在内的医学成像领域引起了相当大的研究关注。超声成像具有时间分辨率高、成本低、无辐射等独特优势。这使得它成为几种临床场景的首选成像模式。这篇综述包括对成像模式的详细介绍,包括亮度模式超声、彩色多普勒血流成像、超声弹性成像、超声造影和多模式融合分析。它概述了基于人工智能的放射组学在超声诊断中的现状和前景,重点介绍了基于人工智慧的放射组论在静态超声图像、动态超声视频和多模态超声融合分析中的应用。
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引用次数: 0
Focus-RCNet: a lightweight recyclable waste classification algorithm based on focus and knowledge distillation. Focus RCNet:一种基于Focus和知识蒸馏的轻量级可回收垃圾分类算法。
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-10-11 DOI: 10.1186/s42492-023-00146-3
Dashun Zheng, Rongsheng Wang, Yaofei Duan, Patrick Cheong-Iao Pang, Tao Tan

Waste pollution is a significant environmental problem worldwide. With the continuous improvement in the living standards of the population and increasing richness of the consumption structure, the amount of domestic waste generated has increased dramatically, and there is an urgent need for further treatment. The rapid development of artificial intelligence has provided an effective solution for automated waste classification. However, the high computational power and complexity of algorithms make convolutional neural networks unsuitable for real-time embedded applications. In this paper, we propose a lightweight network architecture called Focus-RCNet, designed with reference to the sandglass structure of MobileNetV2, which uses deeply separable convolution to extract features from images. The Focus module is introduced to the field of recyclable waste image classification to reduce the dimensionality of features while retaining relevant information. To make the model focus more on waste image features while keeping the number of parameters small, we introduce the SimAM attention mechanism. In addition, knowledge distillation was used to further compress the number of parameters in the model. By training and testing on the TrashNet dataset, the Focus-RCNet model not only achieved an accuracy of 92[Formula: see text] but also showed high deployment mobility.

废物污染是世界范围内的一个重大环境问题。随着人口生活水平的不断提高和消费结构的日益丰富,生活垃圾的产生量急剧增加,迫切需要进一步处理。人工智能的快速发展为垃圾自动分类提供了有效的解决方案。然而,算法的高计算能力和复杂性使得卷积神经网络不适合实时嵌入式应用。在本文中,我们提出了一种称为Focus RCNet的轻量级网络架构,该架构参考MobileNetV2的沙漏结构设计,使用深度可分离卷积从图像中提取特征。Focus模块被引入可回收垃圾图像分类领域,以降低特征的维度,同时保留相关信息。为了使模型在保持参数数量较少的同时更多地关注废弃图像特征,我们引入了SimAM注意力机制。此外,还使用知识蒸馏来进一步压缩模型中的参数数量。通过在TrashNet数据集上进行训练和测试,Focus RCNet模型不仅实现了92的准确度[公式:见正文],而且显示出较高的部署移动性。
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引用次数: 0
Novel 3D local feature descriptor of point clouds based on spatial voxel homogenization for feature matching. 一种新的基于空间体素均匀化的点云三维局部特征描述符用于特征匹配。
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-09-28 DOI: 10.1186/s42492-023-00145-4
Jiong Yang, Jian Zhang, Zhengyang Cai, Dongyang Fang

Obtaining a 3D feature description with high descriptiveness and robustness under complicated nuisances is a significant and challenging task in 3D feature matching. This paper proposes a novel feature description consisting of a stable local reference frame (LRF) and a feature descriptor based on local spatial voxels. First, an improved LRF was designed by incorporating distance weights into Z- and X-axis calculations. Subsequently, based on the LRF and voxel segmentation, a feature descriptor based on voxel homogenization was proposed. Moreover, uniform segmentation of cube voxels was performed, considering the eigenvalues of each voxel and its neighboring voxels, thereby enhancing the stability of the description. The performance of the descriptor was strictly tested and evaluated on three public datasets, which exhibited high descriptiveness, robustness, and superior performance compared with other current methods. Furthermore, the descriptor was applied to a 3D registration trial, and the results demonstrated the reliability of our approach.

在复杂干扰下获得具有高描述性和鲁棒性的三维特征描述是三维特征匹配中一项重要而富有挑战性的任务。本文提出了一种新的特征描述方法,该方法由稳定的局部参考框架和基于局部空间体素的特征描述符组成。首先,通过将距离权重纳入Z轴和X轴计算,设计了一种改进的LRF。随后,在LRF和体素分割的基础上,提出了一种基于体素均匀化的特征描述符。此外,考虑到每个体素及其相邻体素的特征值,对立方体体素进行了均匀分割,从而提高了描述的稳定性。该描述符的性能在三个公共数据集上进行了严格的测试和评估,与当前的其他方法相比,这些数据集具有较高的描述性、鲁棒性和优越的性能。此外,将描述符应用于3D配准试验,结果证明了我们方法的可靠性。
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引用次数: 0
Analytical study of two feature extraction methods in comparison with deep learning methods for classification of small metal objects 两种特征提取方法与深度学习方法在小金属物体分类中的对比分析研究
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2022-05-10 DOI: 10.1186/s42492-022-00111-6
S. Amraee, Maryam Chinipardaz, Mohammadali Charoosaei
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引用次数: 5
Correction: DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images 校正:dcaunet:用于颅内动脉瘤图像分割的密集卷积注意U-Net
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2022-05-08 DOI: 10.1186/s42492-022-00110-7
Wenwen Yuan, Yanjun Peng, Yanfei Guo, Yande Ren, Qianwen Xue
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引用次数: 2
Acquisition repeatability of MRI radiomics features in the head and neck: a dual-3D-sequence multi-scan study 头部和颈部MRI放射组学特征的获取可重复性:双3d序列多重扫描研究
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2022-04-01 DOI: 10.1186/s42492-022-00106-3
Cindy Xue, J. Yuan, Yihang Zhou, O. Wong, K. Cheung, S. Yu
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引用次数: 6
DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images dcaunet:用于颅内动脉瘤图像分割的密集卷积注意U-Net
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2022-03-28 DOI: 10.1186/s42492-022-00105-4
Wenwen Yuan, Yanjun Peng, Yanfei Guo, Yande Ren, Qianwen Xue
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引用次数: 8
Preoperative prediction of lymph node metastasis using deep learning-based features 基于深度学习特征的术前淋巴结转移预测
IF 2.8 4区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Pub Date : 2022-03-07 DOI: 10.1186/s42492-022-00104-5
R. Cattell, Jia Ying, Lan Lei, Jie Ding, Shenglan Chen, Mario Serrano Sosa, Chuan Huang
{"title":"Preoperative prediction of lymph node metastasis using deep learning-based features","authors":"R. Cattell, Jia Ying, Lan Lei, Jie Ding, Shenglan Chen, Mario Serrano Sosa, Chuan Huang","doi":"10.1186/s42492-022-00104-5","DOIUrl":"https://doi.org/10.1186/s42492-022-00104-5","url":null,"abstract":"","PeriodicalId":29931,"journal":{"name":"Visual Computing for Industry Biomedicine and Art","volume":"5 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2022-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41576804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
期刊
Visual Computing for Industry Biomedicine and Art
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