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Tibet Development and Breeding Application of the Fluorescence Molecular Marker of Rice Bacterial Blight Resistance Gene Xa7 水稻抗白叶枯病基因Xa7荧光分子标记在西藏的开发与育种应用
Pub Date : 2021-07-25 DOI: 10.5376/mpb.2021.12.0023
Wu Hao, Deng Guofu, Gao Lijun, D. Gaoxing, H. Juan, G. Ju, Qing Dongjin, Chen Weiwei, Shuangyong Yan, Liang Haifu
In this study, the closely linked fluorescence molecular marker PM-Xa7 of  Xa7  gene was developed on the basis of sequence difference between the resistant variety ‘IRBB7’ containing  Xa7  and other nine bacterial blight susceptible rice varieties, and combine with PARMS technology (Penta-primer amplification refractory mutation system). Genotypes of  Xa7  were identified in 72 rice germplasm and the bacterial blight resistance level of ‘Mei B’ was improved by backcross and screening with this marker. The results showed that two rice germplasms containing  Xa7  were screened out from 72 rice germplasm; By introducing the resistant  Xa7  gene from ‘IRBB7’ into ‘Mei B’ with PM-Xa7, a stable new maintainer with resistance to bacterial blight was successfully obtained. The bacterial blight resistant fluorescence signal was detected in 289 plants and the bacterial blight susceptible fluorescence signal was detected in 93 plants of BC 2 F 2 population generated from ‘IRBB7’ and ‘Mei B’, and the genotypes were consistent with the phenotypes of  Xoo  inoculation. These research results indicated that PM-Xa7 can be effectively used for the marker-assisted breeding of bacterial blight resistant rice variety with the resistant Xa7  gene.
本研究根据含有Xa7的抗病品种IRBB7与其他9个水稻白叶枯病易感品种的序列差异,结合PARMS (penta -引物扩增耐突变系统)技术,开发了Xa7基因紧密连锁的荧光分子标记PM-Xa7。在72份水稻种质中鉴定了Xa7基因型,并通过回交和筛选提高了“梅B”的抗白叶枯病水平。结果表明,从72份水稻种质中筛选出2份含Xa7的水稻种质;用PM-Xa7将‘IRBB7’的抗性Xa7基因导入‘梅B’,成功获得了一个稳定的抗白叶枯病的新维持系。在‘IRBB7’和‘梅B’产生的bc2f2群体中,289株植物检测到抗枯萎病荧光信号,93株植物检测到感枯萎病荧光信号,基因型与接种Xoo后的表型一致。这些研究结果表明,PM-Xa7可以有效地用于标记辅助育种抗白叶枯病水稻品种。
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引用次数: 0
The Complete Chloroplast Genome of a Variety of Lagenaria siceraria var. microcarpa (Naud.) Hara 一种小叶蝉(Lagenaria siceraria var. microcarpa)叶绿体全基因组的研究Hara
Pub Date : 2021-07-16 DOI: 10.5376/mpb.2021.12.0022
Zhaohui Zhang, Dandan Xi, Jie Zhao, Xiaofeng Li, Lu Gao, Chunhong Chen, Yuying Zhu, Hongfang Zhu
Small gourd ( Lagenaria siceraria  var .  microcarpa  (Naud.) Hara), a cultivar of  Lagenaria  family, is an important medicinal and ornamental plants. However, there are few studies on its chloroplast (cp) genome. In this study, we characterized its complete chloroplast (cp) genome with high throughput sequencing. The circular cp genome is determined to be 157, 121 bp in length, with a long sing-copy and a small sing-copy separated by a pair of inverted repeat regions. A total of 132 genes were annotated, including 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudo gene. The overall GC content of cp genome was 37.09%. The maximum likelihood tree suggested that small gourd was closely related to  Lagenaria siceraria.  These results provided an understanding of small gourd cp genome and might be useful for future genetic studies.
小葫芦(Lagenaria siceraria var。microcarpa (Naud)。原草属Lagenaria科的一个栽培品种,是重要的药用和观赏植物。然而,对其叶绿体基因组的研究却很少。在本研究中,我们用高通量测序方法对其叶绿体(cp)全基因组进行了鉴定。圆形cp基因组的长度为157,121 bp,由一对反向重复区分隔出一个长单拷贝和一个小单拷贝。共标注了132个基因,其中蛋白编码基因86个,tRNA基因37个,rRNA基因8个,伪基因1个。cp基因组总GC含量为37.09%。最大似然树分析表明,小葫芦与丝瓜有亲缘关系。这些结果为进一步了解小葫芦cp基因组提供了依据,为今后的遗传研究提供了参考。
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引用次数: 0
Sequencing of Chloroplast Genome of Cucumis melo L. var. agrestis Naud. 甜瓜(Cucumis melo L. var. agrestis Naud)叶绿体基因组序列分析。
Pub Date : 2021-05-25 DOI: 10.5376/MPB.2021.12.0015
Zongxin Ma
Cucumis melo  L. var . agrestis Naud.  belong to the genus  Cucumis  in the Gourd family, it is rich in oil. It can extract high quality edible oil and provide raw materials for medicine and food industry. The chloroplast genome of  Cucumis melo  L. was sequenced for the first time. The results showed that the chloroplast genome of  Cucumis melo  L. was similar to that of common melon. This study can provide a theoretical reference for breeding.
甜瓜。agrestis) Naud。属于葫芦科的黄瓜属,它富含油脂。可提取高品质食用油,为医药、食品工业提供原料。首次对甜瓜叶绿体基因组进行了测序。结果表明,甜瓜叶绿体基因组与普通甜瓜相似。本研究可为育种提供理论参考。
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引用次数: 0
The Development of EST-SSR Markers from Transcriptome Sequencing and Genetic Diversity of Twenty Genotypes with High Yields of Cornus wilsoniana, an Important Wood Oil Plant 重要木油植物山茱萸20个高产基因型EST-SSR标记的转录组测序及遗传多样性分析
Pub Date : 2021-04-07 DOI: 10.5376/MPB.2021.12.0005
Zhenxiang He, Minghua Wang, Xiuyu Xu, Yunfei You, Yong Chen, Liangbo Zhang
Oil plants are not only used as essential nutriments in food but also used broadly as ingredients of industrial products.  Cornus wilsoniana  Wanger is an important native woody oil plant with high-yield and high-oiliness characters in China. The fruit oil of  Cornus wilsoniana  not only could be used as equilibrated dietary oil, but also has hypolipidemic function and helps to overcome EFA deficiency. Genomic information is currently not available for  Cornus wilsoniana , which will therefore affect its genetic improvement process. In this study, 8713 EST-SSRs were identified from the transcriptome sequencing of  Cornus wilsoniana . Most of these EST-SSRs were composed of dimer and trimer repeats. The AG/CT motif is the most common dimeric EST-SSRs motif (53.5%), whereas the CG/CG (0.44%) microsatellites are present only at low abundances. Among the trimeric microsatellites, AAG/CTT (5.53%) and ATC/ATG (4.27%) are the most common motifs. There are no obvious dominant motifs among the tetra-, penta-, and hexa- nucleotide motifs. Fifteen pairs of EST-SSRs primers are developed with polymorphism and used for the genetic diversity analysis of twenty genotypes of  Cornus wilsoniana  with high fruit output. Allele number per locus ranges from 2 to6 with an average of 2.87, and the PIC value ranges from 0.05 to 0.58 with an average of 0.36. Average genetic diversity overall SSR loci for the 20 genotypes was 0.427, ranging from 0.049 to 0.659. All the loci are polymorphic and clearly distinguish the genotypes. Cluster analyze (NJ tree, UPGMA) identifies a similar pattern of variation. 15developed EST-SSRs are informative, codominant and reliable, and could be applied in the improvement programs of  Cornus wilsoniana  in the future.
油料植物不仅是食品中必需的营养成分,而且广泛用作工业产品的原料。山茱萸是中国重要的高产高油性木本油料植物。山茱萸果油不仅可以作为均衡膳食油,而且具有降血脂功能,有助于克服脂肪酸缺乏。目前还没有山茱萸的基因组信息,这将影响其遗传改良过程。本研究从山茱萸的转录组测序中鉴定出8713个EST-SSRs。这些EST-SSRs大多由二聚体和三聚体重复序列组成。AG/CT基序是最常见的二聚体EST-SSRs基序(53.5%),而CG/CG(0.44%)微卫星仅以低丰度存在。在三聚体微卫星中,AAG/CTT(5.53%)和ATC/ATG(4.27%)是最常见的基序。在四核苷酸、五核苷酸和六核苷酸基序中没有明显的显性基序。利用多态性构建了15对EST-SSRs引物,对20个高产山茱萸基因型进行了遗传多样性分析。每个位点的等位基因数在2 ~ 6之间,平均为2.87;PIC值在0.05 ~ 0.58之间,平均为0.36。20个基因型总体SSR位点的平均遗传多样性为0.427,范围为0.049 ~ 0.659。所有的基因座都是多态的,可以明显区分基因型。聚类分析(NJ树,UPGMA)确定了类似的变化模式。开发的EST-SSRs信息丰富、共显性、可靠性高,可用于山茱萸改良项目。
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引用次数: 1
Comprehensive Analysis and Evaluation of New Flue-cured Tobacco Varieties in Sichuan Regional Trials 四川地区烤烟新品种综合分析与评价
Pub Date : 2021-02-10 DOI: 10.5376/MPB.2021.12.0008
Dai Shundong, Ye Pengsheng, Huang Ling, Lai Jia, Zhihua Chen, Zeng Hualan, Zhang Qianfang, Sheng Yuzhen, Ji Qiuping, Wei Shugu
Analytic hierarchy process (AHP) was used to distribute the weight of 10 evaluation indexes of flue-cured tobacco varieties of regional trials in Sichuan province in 2016 for dynamic technique for order preference by similarity to ideal solution (DTOPSIS), membership function was used for optimizing dimensionless treatment of chemical evaluation indexes of DTOPSIS, and then DTOPSIS was used for comprehensive evaluation of varieties. The weight of yield, proportion of superior tobacco, output value, leaf number, stem circumference, plant height, nicotine content, total sugar content, potassium content and black shank disease index was 0.090 2, 0.235 1, 0.301 4, 0.035 1, 0.021 7, 0.021 7, 0.057 1, 0.035 1, 0.035 1 and 0.167 6, respectively. The comprehensive evaluation order of new varieties in planting areas in Southwest Sichuan was ‘Yunyan87’>‘SCT01’>‘Hongda’>‘K326’>‘09011’>‘X4’>‘X3’, the order in South Sichuan was ‘K326’>‘Yunyan87’>‘09011’>‘SCT01’>‘X3’>‘X4’, and the order in North Sichuan was ‘09011’>‘Yunyan87’>‘X4’>‘SCT01’>‘X3’. The results of this study show that further experiments and demonstrations of ‘SCT01’ could be conducted in plant areas in Southwest Sichuan, '09011' has the potential to be used as a good variety in plant areas in North Sichuan, and the corresponding cultivation measures of ‘X3’ and ‘X4’ should be improved. This research would provide scientific basis for the screening, identification and promotion of new flue-cured tobacco varieties, and enrich the evaluation system of new flue-cured tobacco varieties.
采用层次分析法(AHP)对2016年四川省烤烟区域试验品种的10个评价指标进行权重分配,采用理想溶液相似度排序优选(DTOPSIS)动态技术,采用隶属度函数对DTOPSIS化学评价指标进行无因次优化处理,然后采用DTOPSIS对品种进行综合评价。产量、优烟比、产值、叶数、茎周长、株高、烟碱含量、总糖含量、钾含量和黑胫病指数的权重分别为0.090 2、0.235 1、0.301 4、0.035 1、0.021 7、0.021 7、0.057 1、0.035 1、0.035 1和0.167 6。川南地区新品种综合评价顺序为“K326”>“云岩87”>“SCT01”>“洪达”>“K326”>“云岩87”>“09011”>“SCT01”>“X3”>“X4”,川北地区新品种综合评价顺序为“09011”>“云岩87”>“X4”>“SCT01”>“X3”。本研究结果表明,‘SCT01’可在川西南地区进行进一步的试验和示范,‘09011’具有在川北地区作为优良品种的潜力,并应完善‘X3’和‘X4’的相应栽培措施。本研究将为烤烟新品种的筛选、鉴定和推广提供科学依据,丰富烤烟新品种评价体系。
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引用次数: 0
Construction of Plant Regeneration System of Glycyrrhiza mongolicum and Glycyrrhiza Xinjiang 蒙古甘草与新疆甘草植株再生体系的构建
Pub Date : 2021-01-29 DOI: 10.5376/MPB.2021.12.0003
Gao Xinxin, Tian Yu, Guoliang Chen, Wu Jiawen, Bai Zhenqing
In order to establish the plant regeneration system of  Glycyrrhiza mongolicum  and  Glycyrrhiza  Xinjiang, this study used hypocotyls, leaves, cotyledons and stems to inducing callus and regenerated plant, and it screen out the most suitable explants and the best medium for plant regeneration. The experimental results showed that MS+2.0 mg/L NAA+2.0 mg/L 6-BA was the best medium for callus induction and plant regeneration. Among these, hypocotyls and cotyledons are the best explants for callus induction. The tissue induction rate is higher than 90%. The rapid propagation system established in this study can provide the theoretical reference and practical guidance for the breeding and production of fine  Glycyrrhiza uralensis  Fisch. varieties.
为了建立蒙古甘草和新疆甘草的植株再生体系,本研究利用下胚轴、叶片、子叶和茎诱导愈伤组织和再生植株,筛选出最适合植株再生的外植体和最佳培养基。结果表明,MS+2.0 mg/L NAA+2.0 mg/L 6-BA是愈伤组织诱导和植株再生的最佳培养基。其中,下胚轴和子叶是诱导愈伤组织的最佳外植体。组织诱导率大于90%。本研究建立的快速繁殖体系可为优质乌拉尔甘草的选育和生产提供理论参考和实践指导。品种。
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引用次数: 0
Effect of on Nutrient Resorption Efficiency, Metal Ion Concentrations and Nutrient Ratios of Achnatherum inebrians under Various Nitrogen Concentrations 不同氮浓度下对酒牛耳草养分吸收效率、金属离子浓度及养分比的影响
Pub Date : 2021-01-01 DOI: 10.5376/mpb.2021.12.0032
Chen Cheng, Rong-le Liu, Wenpeng Hou, M. Christensen, Yinglong Liu, Jianfeng Wang
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引用次数: 0
Main Quality Traits Analysis and Evaluation of Potato Germplasms 马铃薯种质资源主要品质性状分析与评价
Pub Date : 2021-01-01 DOI: 10.5376/mpb.2021.12.0028
R. Xie, Xiaochuan Zhang, Lin Wu, Zhiqian Guo, Guohui Zhang, Bangqiang Yu
{"title":"Main Quality Traits Analysis and Evaluation of Potato Germplasms","authors":"R. Xie, Xiaochuan Zhang, Lin Wu, Zhiqian Guo, Guohui Zhang, Bangqiang Yu","doi":"10.5376/mpb.2021.12.0028","DOIUrl":"https://doi.org/10.5376/mpb.2021.12.0028","url":null,"abstract":"","PeriodicalId":32255,"journal":{"name":"Journal of Plant Molecular Breeding","volume":"55 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82760068","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Research on the Progress of Systematic Taxonomy in the Genus Asparagus of China 中国芦笋属植物系统分类研究进展
Pub Date : 2021-01-01 DOI: 10.5376/mpb.2021.12.0026
Wentao Sheng, Tonglin Zhang, Quan Kuang, Zhangfeng Wang, Shaochun Luo
Garden asparagus ( Asparagus officinalis L.) is a kind of nutritious and healthy vegetable with important economic value in the world. China has become the largest production country of garden asparagus in the world. But the seeds mainly depend on import, so we need to innovate breeding system and improve the international competitiveness of domestic asparagus varieties. Genetic analysis demonstrated that the genetic variation of garden asparagus was low and its heterosis was weak among cultivars. Inter-specific hybridization is an important means to utilize heterosis, but the relationship between the classical taxonomy and molecular phylogeny of the genus Asparagus is disordered, which limits the development of interspecific hybridization breeding. In this genus, thirty-one species have been found in China, which is an effective genetic resource for the utilization of heterosis among Asparagus species. In order to provide reference for the next step to clarify the phylogenetic relationship of this genus and to carry out the interspecific hybrid breeding of garden asparagus in the near future, the research progress of its classical and molecular phylogeny of this genus is reviewed in this study.
园林芦笋(asparagus officinalis L.)是世界上具有重要经济价值的一种营养保健蔬菜。中国已成为世界上最大的园林芦笋生产国。但种子主要依赖进口,需要创新育种制度,提高国内芦笋品种的国际竞争力。遗传分析表明,园林芦笋品种间遗传变异较低,杂种优势较弱。种间杂交是利用杂种优势的重要手段,但芦笋属植物的经典分类学与分子系统发育关系混乱,限制了种间杂交育种的发展。该属在中国已发现31种,是利用芦笋种间杂种优势的有效遗传资源。为了为下一步厘清该属植物的系统发育关系和开展园芦笋的种间杂交育种提供参考,本文对其经典系统发育和分子系统发育的研究进展进行了综述。
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引用次数: 0
Effect of Activated Carbon on Rooting of Tissue Culture Seedlings of Qiuzi Pear 活性炭对秋子梨组培苗生根的影响
Pub Date : 2021-01-01 DOI: 10.5376/MPB.2021.12.0010
Xiao-feng Luan, Hao-wen Shi, B. Xu, Qiannan Zhang, Li Liu
In order to improve the rooting rate of Qiuzi pear tissue culture seedlings, this study took ‘sorb’ as experimental material, based on Qiuzi pear rooting tissue culture medium (1/2MS+IBA 0.5 mg/L), and added different concentrations of activated carbon (AC): 0.25 g/L, 0.50 g/L, 0.75 g/L, 1.00 g/L. The results showed that the rooting rate, rooting number and root length of tissue culture seedlings cultured with activated carbon were significantly higher than those of the control group. The most suitable medium for rooting Qiuzi pear was 1/2MS+IBA 0.5 mg/L+AC 1.00 g/L, and the rooting rate of the treated ‘sorb’ tissue culture seedlings reached 90%, which could obviously promote the growth of Qiuzi pear tissue culture. The results provide a theoretical basis for improving the rooting rate and survival rate of tissue culture seedlings of pear plants, and provide a reference for the establishment of rapid propagation system of woody plants.
为了提高秋子梨组培苗的生根率,本研究以‘sorb’为实验材料,在秋子梨组培苗生根培养基(1/2MS+IBA 0.5 mg/L)的基础上,添加不同浓度的活性炭(AC): 0.25 g/L、0.50 g/L、0.75 g/L、1.00 g/L。结果表明,活性炭培养组培苗的生根率、生根数和根长均显著高于对照组。最适合秋子梨生根的培养基为1/2MS+IBA 0.5 mg/L+AC 1.00 g/L,处理过的“sorb”组培苗生根率达到90%,能明显促进秋子梨组培苗的生长。研究结果为提高梨植株组培苗的生根率和成活率提供了理论依据,并为木本植物快速繁殖体系的建立提供了参考。
{"title":"Effect of Activated Carbon on Rooting of Tissue Culture Seedlings of Qiuzi Pear","authors":"Xiao-feng Luan, Hao-wen Shi, B. Xu, Qiannan Zhang, Li Liu","doi":"10.5376/MPB.2021.12.0010","DOIUrl":"https://doi.org/10.5376/MPB.2021.12.0010","url":null,"abstract":"In order to improve the rooting rate of Qiuzi pear tissue culture seedlings, this study took ‘sorb’ as experimental material, based on Qiuzi pear rooting tissue culture medium (1/2MS+IBA 0.5 mg/L), and added different concentrations of activated carbon (AC): 0.25 g/L, 0.50 g/L, 0.75 g/L, 1.00 g/L. The results showed that the rooting rate, rooting number and root length of tissue culture seedlings cultured with activated carbon were significantly higher than those of the control group. The most suitable medium for rooting Qiuzi pear was 1/2MS+IBA 0.5 mg/L+AC 1.00 g/L, and the rooting rate of the treated ‘sorb’ tissue culture seedlings reached 90%, which could obviously promote the growth of Qiuzi pear tissue culture. The results provide a theoretical basis for improving the rooting rate and survival rate of tissue culture seedlings of pear plants, and provide a reference for the establishment of rapid propagation system of woody plants.","PeriodicalId":32255,"journal":{"name":"Journal of Plant Molecular Breeding","volume":"19 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79149043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Plant Molecular Breeding
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