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2020 13th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI)最新文献

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A Pipeline for Extraction of Sharp-Wave Ripples from Multi-Channel in vivo Recording EEG 一种多通道活体记录脑电图中锐波波纹提取的流水线方法
Sun Zhou, Jing Li
Extraction of Sharp-Wave Ripples (SWRs) from brain wave signals plays an important part in various medical studies of mammalian nervous systems. SWRs, playing a crucial role in memory consolidation, are oscillatory patterns in the mammalian brain hippocampus seen on an EEG during immobility and sleep. An SWR is composed of large-amplitude sharp waves accompanied by fast field potential oscillations known as ripple rhythms. However, most of the current commercial software for brain wave processing does not provide with an accurate SWR extraction function. Also, so far there are few literatures that fully explore the ripple detection method. Taking a fuller look at the characteristics of ripple events, an improved pipeline is presented to extract SWRs. The utility of detection based on the large-amplitude feature of SWRs will be weakened by another feature, fast oscillation. Therefore, to shield the extraction from that undesired influence, Hilbert transformation is suggested to restore the analytical signal in complex number field and then to obtain the envelope of the original EEG. Next, Gaussian window is adopted to get rid of some artifacts. Then, the central and the start and end segment of an SWR are successively determined with a sliding window. In addition, considering that the determination of the duration of a ripple also changes the frequency content of a detected, truncated ripple by the spectral leakage effect, which makes it hard to find the actual frequency of the rhythm, we add Hanning window to prevent that effect. From three sets of multi-channel in vivo recording EEG data obtained from different genotypes of mice, we detected SWR events with the proposed method, whose effectiveness and accuracy were validated.
从脑电波信号中提取锐波波纹在哺乳动物神经系统的各种医学研究中起着重要的作用。swr在记忆巩固中起着至关重要的作用,它是哺乳动物大脑海马体在静止和睡眠时的脑电图显示的振荡模式。SWR是由伴随着快速场势振荡(称为纹波节奏)的大振幅锐波组成的。然而,目前大多数商用脑电波处理软件并没有提供准确的SWR提取功能。而且,目前对纹波检测方法进行充分探讨的文献还很少。为了更全面地了解波纹事件的特性,提出了一种改进的管道来提取swr。基于swr的大振幅特征的检测将被另一个特征——快速振荡削弱。因此,为了使提取过程不受这种不希望的影响,建议采用希尔伯特变换将解析信号恢复到复数域,从而得到原始脑电图的包络。其次,采用高斯窗去除一些伪影。然后,通过滑动窗口依次确定单波反射器的中心段、起始段和结束段。此外,考虑到纹波持续时间的确定也会通过频谱泄漏效应改变检测到的截断纹波的频率含量,使得难以找到节奏的实际频率,我们添加了汉宁窗来防止这种影响。通过三组不同基因型小鼠的多通道活体脑电记录数据,验证了该方法的有效性和准确性。
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引用次数: 0
Embedded Object Detection System Based on Deep Neural Network 基于深度神经网络的嵌入式目标检测系统
Hanwu Luo, Wenzheng Li, Wang Luo, Fang Li, Jun Chen, Yuan Xia
Object detection is widely used in many fields, such as intelligent security monitoring, smart city, power inspection, and so on. The object detection algorithm based on deep learning is a kind of storage intensive and computing intensive algorithm which is difficult to achieve on the embedded platform with limited storage and computing resources. In this paper, we choose mobinetv2, a lightweight neural network with few model parameters and strong feature extraction ability, to replace darknet53 as the backbone network of YOLOv3 algorithm. In addition, we use a model compression method based on channel pruning to compress the network model. This method compresses model to detecting objects on embedded ARM platform. Neon instruction and OpenMP technology are further used to optimize and accelerate the intensive computing of convolutional network, and finally achieve a real-time embedded object detection system.
物体检测被广泛应用于智能安防监控、智慧城市、电力巡检等诸多领域。基于深度学习的目标检测算法是一种存储密集型和计算密集型算法,在存储和计算资源有限的嵌入式平台上很难实现。本文选择模型参数少、特征提取能力强的轻量级神经网络mobinetv2代替darknet53作为YOLOv3算法的骨干网络。此外,我们还采用了一种基于信道剪枝的模型压缩方法来压缩网络模型。该方法将模型压缩到嵌入式ARM平台上检测目标。进一步利用Neon指令和OpenMP技术对卷积网络的密集计算进行优化和加速,最终实现实时嵌入式目标检测系统。
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引用次数: 0
A Hybrid Nonrigid Medical Image Registration Method on Chest Radiography 胸部x线摄影的混合非刚性医学图像配准方法
Xia Li, Qing Chang
Accurate non-rigid registration of chest radiographs facilitates image diagnosis and occupies an important position in medical image analysis. In this paper, we proposed a non-rigid registration framework that combines the advantages of B-spline FFD (free form deformation) and inertial demons. The proposed method applied B-spline FFD to match structures in the lung area and prevent lesion being destroyed; at the same time, the inertial demons model is used to refine the detail of results observed by FFD. Temporal subtraction images created from the chest radiography image pairs are given to demonstrate the registration accuracy. Multiple experiments on clinical data have shown that the proposed algorithm is more accurate in chest radiographs registration than the widely used B-spline FFD and demons algorithm alone.
胸片准确的非刚性配准有助于影像诊断,在医学影像分析中占有重要地位。在本文中,我们提出了一种结合b样条FFD(自由形式变形)和惯性图像优点的非刚性配准框架。该方法利用b样条FFD对肺区结构进行匹配,防止病灶被破坏;同时,利用惯性恶魔模型对FFD观测结果的细节进行细化。为了验证配准的准确性,给出了由胸片图像对生成的时间相减图像。多次临床数据实验表明,该算法在胸片配准方面比目前广泛使用的b样条FFD和demons算法更准确。
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引用次数: 2
Matrix Factorization Based on BatchNorm and Preference Bias 基于BatchNorm和偏好偏差的矩阵分解
B. Wang, Wenming Ma
With the rapid development of science and technology, huge amounts of information fill people’s lives, and the accompanying information overload phenomenon has become an urgent problem to be solved. Because the recommendation system can quickly find the products users want in the massive item information, to a certain extent It has attracted much attention to solve the problem of information overload. Matrix factorization is a commonly used technique in recommendation systems. It can effectively improve the recommendation effect when the scoring matrix is sparse. However, due to its own reasons, matrix factorization has many problems such as sparseness, cold start, and low interpretability. In the field of deep learning, because the normalization technology BatchNorm can optimize the training process, accelerate the training speed and make the training results more stable, it has been studied by a large number of scholars. In this paper, Matrix Factorization Based on BatchNorm and Preference Bias is proposed. BatchNorm is combined with matrix factorization, user and item preferences are added, and Adam algorithm is used for optimization. Experiments show that the algorithm in this paper has a good recommendation effect on sparse matrix.
随着科学技术的飞速发展,海量的信息充斥着人们的生活,随之而来的信息超载现象已经成为一个亟待解决的问题。由于推荐系统可以在海量的商品信息中快速找到用户想要的商品,在一定程度上解决信息过载的问题备受关注。矩阵分解是推荐系统中常用的一种技术。当评分矩阵稀疏时,可以有效地提高推荐效果。然而,由于自身的原因,矩阵分解存在稀疏性、冷启动、可解释性低等问题。在深度学习领域,由于规范化技术BatchNorm可以优化训练过程,加快训练速度,使训练结果更加稳定,因此得到了大量学者的研究。提出了一种基于BatchNorm和Preference Bias的矩阵分解方法。将BatchNorm与矩阵分解相结合,加入用户偏好和商品偏好,并采用Adam算法进行优化。实验表明,本文算法对稀疏矩阵具有良好的推荐效果。
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引用次数: 1
Evolutionary Optimized Multiple Instance Concept Learning for Beat-to-Beat Heart Rate Estimation from Electrocardiograms 基于心电图的单次心率估计的进化优化多实例概念学习
Jiaxin Cheng, Jun Zhong, Handing Wang, Xu Tang, Changzhe Jiao, Hong Zhou
In this paper, we proposed an effective method to obtain the R wave concept to estimate heart rate from electrocardiogram signals produced by a wearable electro-cardiogram(ECG) device. The multiple instance adaptive co-sine/coherent estimator(MI-ACE) is a multiple instance learning method that can learn the target concept from imprecisely labeled data. However, the R wave concepts estimated by MI-ACE are dependent on initialization strategy of MI-ACE. Thus, the heart rate estimation results are undetermined with different initialization. Evolutionary algorithm is a global optimization method that simulates natural processes. To overcome this problem, we pro-posed the evolutionary optimized MI-ACE algorithm(MI-ACE-Evo) which combines MI-ACE with an evolutionary optimization to learn the R wave target concept, which will make heart rate estimation more effective and not affected by varies initialization of MI-ACE. The experimental results show that the R wave concept learned by MI-ACE-Evo is more discriminative and the heartrate estimation results are superior to that of the original MI-ACE method.
本文提出了一种有效的方法,从可穿戴式心电图设备产生的心电图信号中获得R波概念来估计心率。多实例自适应余弦/相干估计器(MI-ACE)是一种能够从不精确标记的数据中学习目标概念的多实例学习方法。然而,MI-ACE估计的R波概念依赖于MI-ACE的初始化策略。因此,不同初始化的心率估计结果是不确定的。进化算法是一种模拟自然过程的全局优化方法。为了克服这一问题,我们提出了进化优化的MI-ACE算法(MI-ACE- evo),该算法将MI-ACE与进化优化相结合,学习R波目标概念,使心率估计更加有效,并且不受MI-ACE初始化的不同影响。实验结果表明,MI-ACE- evo学习到的R波概念具有更强的判别性,心率估计结果优于原始MI-ACE方法。
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引用次数: 1
Sparse Representation of Sound Speed Profiles Based on Dictionary Learning 基于字典学习的声速分布稀疏表示
Sijia Sun, Hangfang Zhao
The perturbations of sound speed profiles (SSPs) has great influence on sound propagation. Empirical orthogonal functions (EOFs) are often used to simplify the description of sound speed profiles. However, when the unevenness of seawater, such as internal wave and turbulence exists, the regularization operation will result in a significant decrease in the reconstruction accuracy of sound speed. In this paper, the dictionary learning, a form of unsupervised machine learning, is used to generate non-orthogonal entries of sound speed profiles, OMP algorithm is used in sparse coding, while K-SVD algorithm is used in dictionary updating. Because dictionary learning does not require the use of orthogonal conditions, it is more flexible for training data, and thus can use fewer atomic combinations to achieve higher reconstruction accuracy. The reconstruction performance of EOFs and LDs was tested with HYCOM data. The results show that compared with EOFs, LDs can better explain the perturbations of sound speed profiles with a few entries. Dictionary learning can improve the sparsity of sound speed profiles and improve the reconstruction accuracy of sound speed profiles.
声速分布的扰动对声音的传播有很大的影响。经验正交函数(EOFs)常用于简化声速分布的描述。然而,当海水存在内波、湍流等不均匀性时,正则化操作会导致声速重建精度显著降低。本文采用无监督机器学习中的字典学习生成声速剖面的非正交项,稀疏编码采用OMP算法,字典更新采用K-SVD算法。由于字典学习不需要使用正交条件,因此对于训练数据更加灵活,因此可以使用更少的原子组合来实现更高的重建精度。利用HYCOM数据对EOFs和ld的重构性能进行了测试。结果表明,与EOFs相比,LDs能更好地解释声速谱的微扰。字典学习可以提高声速分布的稀疏性,提高声速分布的重建精度。
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引用次数: 1
Remote Sensing Images Dehazing Algorithm based on Cascade Generative Adversarial Networks 基于级联生成对抗网络的遥感图像去雾算法
Xiao Sun, Jindong Xu
The existing remote sensing image dehazing methods based on deep learning networks usually use pairs of clear images and corresponding haze images to train the model. However, pairs of clear images and their haze counterparts are extremely lacking, and synthetically haze images could not accurately simulate the real haze generation process in real-world scenarios. To address this problem, a cascade method combining two GANs (generative adversarial networks) is proposed. It contains a learning-to-haze GAN (UGAN) and learning-to-dehaze GAN (PAGAN). UGAN learns how to haze remote sensing images with unpaired clear and haze images sets, and then guides the PAGAN to learn how to correctly dehaze such images. To reduce the discrepancy between real haze and synthetic haze images, we added self-attention mechanism to PAGAN. The details can be generated using cues from all feature locations. Moreover, the discriminator could check that highly detailed features in distant portions of the images that are consistent with each other. Compared with other dehazing methods, this algorithm does not require numerous pairs of images to train the network repeatedly. And the results show that the cascaded generative adversarial networks has visual and quantitative effectiveness for the removal of haze, thin clouds.
现有的基于深度学习网络的遥感图像去雾方法,通常使用成对的清晰图像和相应的雾霾图像来训练模型。然而,清晰的图像对及其对应的雾霾图像极为缺乏,合成的雾霾图像无法准确模拟真实场景下的真实雾霾生成过程。为了解决这一问题,提出了一种结合两个生成式对抗网络的级联方法。它包含一个学习去雾GAN (UGAN)和一个学习去雾GAN (PAGAN)。UGAN学习如何用未配对的清晰和雾霾图像集来雾化遥感图像,然后指导PAGAN学习如何正确地去雾化这样的图像。为了减少真实雾霾图像与合成雾霾图像之间的差异,我们在PAGAN中加入了自关注机制。细节可以使用来自所有特征位置的线索生成。此外,鉴别器还可以检查图像中较远部分的高度细节特征是否彼此一致。与其他去雾方法相比,该算法不需要大量的图像对来反复训练网络。结果表明,级联生成对抗网络对雾霾、薄云的去除具有视觉和定量的效果。
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引用次数: 5
An Intensity Separated Variational Regularization Model for Multichannel Image Enhancement 多通道图像增强的强度分离变分正则化模型
Rubing Xi, Lei Jin
The channels of the multi-temporal SAR image have strong scattering target distribution in different positions. Focus on this, this paper propose the intensity segregation representation model for the multi-temporal SAR image restoration. This new variational regularization model based on the intensity separation of the multi-temporal SAR image is composed of two sub-models. The first one is a variational regularization model for the intensity component of the image, where the noise is assumed to be multiplicative, and the regularization term is the total variation. A fixed point iterative algorithm is used to solve the Euler-Lagrangian equation of the first sub-model. The second sub-model is the vectorial variational regularization model for the vector component of the image, which is obtained by the assumption that the noise is multiplicative. And the vectorial total variation norm of the vector defined on the unit sphere is obtained. A partial differential equation method is used to get the differential iterative algorithm to solve the Euler-Lagrangian equation of the second sub-model. In this paper, the intensity separation model is applied to the multi-temporal SAR image despeckling. The strong scattering target is well preserved while the good efficient of despeckling is obtained. In summary, this method is proved to highly promote the ability of distinguish different kinds of surface target of the multi-temporal SAR image.
多时相SAR图像通道在不同位置具有较强的散射目标分布。针对这一问题,本文提出了一种用于多时相SAR图像恢复的强度分离表示模型。基于多时段SAR图像强度分离的变分正则化模型由两个子模型组成。第一个是图像强度分量的变分正则化模型,其中假设噪声是相乘的,正则化项是总变差。采用不动点迭代算法求解第一个子模型的欧拉-拉格朗日方程。第二个子模型是图像矢量分量的矢量变分正则化模型,该模型是通过假设噪声是乘法得到的。得到了在单位球上定义的矢量的矢量总变分范数。采用偏微分方程法得到求解第二子模型欧拉-拉格朗日方程的微分迭代算法。本文将强度分离模型应用于多时相SAR图像去斑。在保持强散射目标的同时,获得了良好的去斑效率。实验结果表明,该方法极大地提高了多时相SAR图像中不同类型表面目标的识别能力。
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引用次数: 1
Modified Slime Mould Algorithm via Levy Flight 通过Levy Flight改进黏菌算法
Zhesen Cui, Xiaolei Hou, Hu Zhou, Wei Lian, Jinran Wu
The slime mould algorithm (SMA) is a recently developed meta-heuristic optimization algorithm which is based on the oscillation mode of slime mould in nature. However, the SMA is often trapped in local optima for global continuous optimization problems. To strengthen SMA’s exploration for global optimum, we propose a modified SMA, which takes randomization based on a Levy distribution instead of the traditional uniform one, namely LF-SMA. Our LF-SMA is integrated with Levy-flight guidance to its optimal paths for connecting food with excellent exploratory propensity. Experimental results show that the proposed LF-SMA achieves better performance in 13 benchmark test functions and one investigated engineering case in terms of both computation cost and solution.
黏菌算法是近年来发展起来的一种基于自然界黏菌振荡模式的元启发式优化算法。然而,对于全局连续优化问题,SMA常常陷入局部最优。为了加强SMA对全局最优的探索,我们提出了一种改进的SMA,它采用基于Levy分布的随机化,而不是传统的均匀分布,即LF-SMA。我们的LF-SMA集成了Levy-flight引导,以实现将食物与出色的探索倾向联系起来的最佳路径。实验结果表明,该算法在13个基准测试函数和1个工程实例中均取得了较好的性能。
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引用次数: 10
Motion Artifact Detection in PPG Signals Based on Gramian Angular Field and 2-D-CNN 基于Gramian角场和二维cnn的PPG信号运动伪影检测
Xin Liu, Qihan Hu, H. Yuan, Cuiwei Yang
Due to the presence of motion artifacts (MAs), heart rate monitoring using PPG sensors in daily life and physical exercise is challenging, and there have been many studies on MA removal algorithms. However, most studies do not consider the quality evaluation of PPG signal before the MA removal. In this way, removing the MA directly regardless of whether there is motion artifact signal is not only a waste of computing resources, but also easy to introduce new noise. In this paper, the MA detection in PPG signal is performed by dividing the original signal into 6s signal segments and calculating the amplitude mean difference function (AMDF). Then the obtained AMDF is converted into a 2-D image through the Gramian Angular Field (GAF), and then classified by the Convolutional Neural Networks (CNN) classifier, so as to distinguish the contaminated signal and clean signal. In the subsequent processing, only the contaminated signal needs to remove the MAs, and the clean signal segment can be directly used for heart rate estimation. In this study, we achieve a classification accuracy of 0.966 in the local database, and a classification accuracy of 0.946 in the BIDMC PPG and Respiration Dataset published by PhysioNet. With the combination of feature extraction and SVM classifier, the proposed method has significantly improved the results.
由于运动伪影(MAs)的存在,在日常生活和体育锻炼中使用PPG传感器进行心率监测具有挑战性,目前已有许多关于MA去除算法的研究。然而,大多数研究并未考虑在MA去除前对PPG信号进行质量评价。这样,不考虑是否存在运动伪信号而直接去除MA不仅浪费计算资源,而且容易引入新的噪声。本文通过将原始信号分成6个信号段,计算振幅平均差分函数(AMDF),对PPG信号进行MA检测。然后将得到的AMDF通过Gramian角场(GAF)转换成二维图像,再通过卷积神经网络(CNN)分类器进行分类,从而区分出污染信号和干净信号。在后续的处理中,只需要去除被污染的信号,干净的信号段就可以直接用于心率估计。在本研究中,我们在本地数据库中实现了0.966的分类精度,在PhysioNet发布的BIDMC PPG和呼吸数据集中实现了0.946的分类精度。该方法将特征提取与SVM分类器相结合,显著改善了分类结果。
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引用次数: 11
期刊
2020 13th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI)
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