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Short communications: Exploring temporal fluorescent changes in the composition of human semen stains 短讯:探索人类精液染色剂成分的时间性荧光变化。
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-22 DOI: 10.1016/j.jchromb.2024.124278
Nihad Achetib , Susanne Danser , Kirsa Min , Zehra Köksal , Maurice C.G. Aalders , Annemieke van Dam

Semen traces are considered important pieces of evidence in forensic investigations, especially those involving sexsual offenses. Recently, our research group developed a fluorescence-based technique to accurately determine the age of semen traces. However, the specific compounds resonsible for the fluoresescent behaviour of ageing semens remain unknown. As such, in this exploratory study, the aim is to identify the components associated with the fluorescent behavior of ageing semen traces. In this investigation semen stains and various biofluorophores commonly found in body fluids were left to aged for 0, 2, 4, 7, 14 and 21 days. Subsequently, thin-layer chromatography (TLC) and ultra-performance liquid chromatography (UPLC) mass spectrometry were performed to identify the biofluorophores present in semen. Several contributors to the autofluorescence could be identified in semen stain, these include tryptophan, kynurenine, kynurenic acid, and norharman. The study sheds light on the.

精液痕迹被认为是法医调查的重要证据,尤其是涉及性犯罪的证据。最近,我们的研究小组开发了一种基于荧光的技术,用于准确测定精液痕迹的年龄。然而,造成老化精液荧光行为的特定化合物仍然未知。因此,在这项探索性研究中,我们的目的是找出与老化精液痕迹荧光行为相关的成分。在这项研究中,精液染色剂和体液中常见的各种生物荧光团被放置老化 0、2、4、7、14 和 21 天。随后,采用薄层色谱法(TLC)和超高效液相色谱法(UPLC)进行质谱分析,以确定精液中的生物荧光团。在精液染色剂中可以鉴定出几种自发荧光的成分,其中包括色氨酸、犬尿氨酸、犬尿酸和诺哈曼。这项研究揭示了
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引用次数: 0
Streamlined on-column refolding and purification of nanobodies from inclusion bodies expressed as fusion proteins 从表达为融合蛋白的包涵体中简化柱上重折叠和纯化纳米抗体。
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-22 DOI: 10.1016/j.jchromb.2024.124279
Yiwen Zhang , Yang Guo , Liang Song , Wenshuai Liu , Rui Nian , Xiying Fan

This study introduces an efficient on-column refolding and purification method for preparing nanobodies (Nbs) expressed as inclusion bodies and fusion proteins. The HisTrapTM FF system was successfully employed for the purification of the fusion protein FN1-ΔI-CM-2D5. The intein ΔI-CM cleavage activity was activated at 42 °C, followed by incubation for 4 h. Leveraging the remarkable thermal stability of Nbs, 2D5 was further purified through heat treatment at 80 °C for 1h. This method yielded up to 107.2 mg of pure 2D5 with a purity of 99.2 % from just 1L of bacterial culture grown in a shaker flask. Furthermore, this approach successfully restored native secondary structure and affinity of 2D5. Additionally, the platform was effectively applied to the refolding and purification of a polystyrene-binding nanobody (B2), which exhibited limited expression in the periplasmic and cytoplasmic spaces of E. coli. This endeavor resulted in the isolation of 53.2 mg of pure B2 Nb with a purity exceeding 99.5 % from the same volume of bacterial culture. Significantly, this approach restored the native secondary structure of the Nbs, highlighting its potential for addressing challenges associated with expressing complex Nbs in E. coli. Overall, this innovative platform provides a scientifically rigorous and reproducible method for the efficient preparation of Nbs, offering a valuable tool for antibody research and development.

本研究介绍了一种高效的柱上重折叠和纯化方法,用于制备以包涵体和融合蛋白形式表达的纳米抗体(Nbs)。HisTrapTM FF 系统被成功用于纯化融合蛋白 FN1-ΔI-CM-2D5。利用 Nbs 显著的热稳定性,将 2D5 在 80 °C 下加热处理 1 小时后进一步纯化。这种方法只需在摇瓶中培养 1 升细菌,就能得到 107.2 毫克纯 2D5,纯度高达 99.2%。此外,这种方法还成功恢复了 2D5 的原生二级结构和亲和力。此外,该平台还有效地应用于聚苯乙烯结合纳米抗体(B2)的重折叠和纯化,该纳米抗体在大肠杆菌的周质和细胞质空间中表达有限。通过这一努力,从相同体积的细菌培养物中分离出了 53.2 毫克纯净的 B2 Nb,纯度超过 99.5%。值得注意的是,这种方法恢复了 Nbs 的原生二级结构,凸显了它在解决与在大肠杆菌中表达复杂 Nbs 相关的挑战方面的潜力。总之,这一创新平台为高效制备 Nbs 提供了一种科学严谨、可重复的方法,为抗体研究和开发提供了一种宝贵的工具。
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引用次数: 0
Development of HPTLC method for simultaneous determination of quercetin and kaempferol in leaf extract of Hibiscus mutabilis 建立同时测定木槿叶提取物中槲皮素和山柰酚含量的 HPTLC 方法。
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-21 DOI: 10.1016/j.jchromb.2024.124277
Anusha Srinivas , Sapna Nehra

The aim of this study was to develop and validate a densitometric High-Performance Thin-Layer Chromatography (HPTLC) method for the simultaneous quantification of quercetin (Q) and kaempferol (K) in Hibiscus mutabilis leaf extracts. The analyses were performed on silica gel 60 F254 plates using a mobile phase composed of toluene, formic acid, and ethyl acetate (6:0.4:4, v/v/v). Detection was carried out at a wavelength of 272 nm using a deuterium and tungsten light source. The method exhibited excellent linearity over the concentration range of 100–600 ng/spot for quercetin and 500–3000 ng/spot for kaempferol, with determination coefficients (r2) of 0.9989 and 0.9973, respectively. The method showed no interferences from the plant matrix. The relative standard deviation (RSD) values for intra- and inter-day precision were less than 2% for both flavonoids. Recovery rates ranged from 97.69% to 99.20% for quercetin and from 89.91% to 95.87% for kaempferol. The limits of detection (LOD) were 190.23 ng/spot for quercetin and 187.23 ng/spot for kaempferol, while the limits of quantification (LOQ) were 570.10 ng/spot for quercetin and 566.12 ng/spot for kaempferol. This validated HPTLC method is reliable, precise, and accurate, making it suitable for the quality control of Hibiscus mutabilis leaf extracts. The study’s findings can be broadly applied to the quality control of herbal products, pharmacological research, and the development of nutraceuticals. The method’s ability to provide rapid and accurate quantification makes it an invaluable tool for researchers across various disciplines.

本研究旨在开发并验证一种同时定量测定变叶木槿叶提取物中槲皮素(Q)和山柰醇(K)含量的密度计高效薄层色谱(HPTLC)方法。分析采用硅胶 60 F254 薄层板,流动相为甲苯、甲酸和乙酸乙酯(6:0.4:4, v/v/v)。使用氘代和钨光源在 272 纳米波长下进行检测。该方法在槲皮素 100-600 ng/斑点和山奈酚 500-3000 ng/斑点浓度范围内线性关系良好,测定系数(r2)分别为 0.9989 和 0.9973。该方法没有受到植物基质的干扰。两种黄酮类化合物日内和日间精密度的相对标准偏差(RSD)均小于 2%。槲皮素的回收率为 97.69% 至 99.20%,山奈酚的回收率为 89.91% 至 95.87%。槲皮素和山奈酚的检出限分别为 190.23 ng/spot和 187.23 ng/spot,定量限分别为 570.10 ng/spot和 566.12 ng/spot。该HPTLC方法可靠、精密、准确,适用于木芙蓉叶提取物的质量控制。研究结果可广泛应用于中草药产品的质量控制、药理研究和营养保健品的开发。该方法能够快速、准确地定量,是各学科研究人员的宝贵工具。
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引用次数: 0
A novel method for the simultaneous determination of drugs of abuse, ethyl glucuronide and synthetic opioids in human hair through a single digestion, purification and analysis in LC-MS/MS 通过一次消化、纯化和 LC-MS/MS 分析,同时测定人类毛发中的滥用药物、葡萄糖醛酸乙酯和合成阿片类药物的新方法。
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-21 DOI: 10.1016/j.jchromb.2024.124269
D. Vandelli , F. Palazzoli , P. Verri, V. Castagnetti, C. Profeta, A. Borghi, R. Cecchi

Polydrug use is a serious health and social problem worldwide. Over the past several years, there has been an increasing tendency to combine narcotics, alcohol, sedatives, and/or stimulants. To the traditional drugs of abuse and alcohol, an increase of new abuse drugs such as synthetic opioids has been added. In the current study, the development and validation of an innovative and fast analytical procedure has been presented to determine drugs of abuse, ethyl glucuronide and synthetics opioids in 30 mg of human hair through a single digestion, purification and analysis in LC-MS/MS. A combine simple preparation of hair sample followed to a single chromatographic run of 10 min has been proposed. A full validation for 54 target analytes for the parameters of selectivity, linearity, limit of detection, limit of quantification, accuracy, precision, matrix effects, recovery, and dilution integrity was successful completed. The method was linear in different ranges with r values of at least 0.990; the value to the validated LLOQ values were in the range 0.1–100 pg/mg. The method offered satisfactory precisions (CV<15 % and accuracy ± 20 %). In conclusion, a significant reduction in the overall times of the analytical procedure and the reduction of consumables costs make this method extremely advantageous and undoubtedly useful in routine laboratory workflow analyses and open the way to the prospect of a further implementation which also includes other classes of xenobiotics.

使用多种药物是世界范围内一个严重的健康和社会问题。在过去几年中,人们越来越倾向于将麻醉剂、酒精、镇静剂和/或兴奋剂混合使用。除了传统的滥用药物和酒精之外,合成阿片类药物等新型滥用药物也在不断增加。本研究开发并验证了一种创新的快速分析程序,只需一次消化、纯化和 LC-MS/MS 分析,即可测定 30 毫克人类毛发中的滥用药物、乙基葡萄糖醛酸苷和合成类阿片。毛发样品的制备非常简单,只需 10 分钟的色谱运行。成功完成了对 54 种目标分析物的选择性、线性、检出限、定量限、准确度、精密度、基质效应、回收率和稀释完整性等参数的全面验证。该方法在不同范围内线性关系良好,r 值不低于 0.990;有效最低检出限的范围为 0.1-100 pg/mg。该方法的精密度(CV
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引用次数: 0
Simultaneous determination of three tyrosine kinase inhibitors and three triazoles in human plasma by LC-MS/MS: applications to therapeutic drug monitoring and drug-drug interaction studies 利用 LC-MS/MS 同时测定人体血浆中的三种酪氨酸激酶抑制剂和三种三唑类药物:在治疗药物监测和药物相互作用研究中的应用
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-20 DOI: 10.1016/j.jchromb.2024.124276
Ninghong Li , Lu Liu , Dong Liu , Hengyi Yu , Guangjie Yang , Lihui Qiu , Yufei Chen , Dong Xiang , Xuepeng Gong

Tyrosine kinase inhibitors (TKIs) and triazole antifungals are the first-line drugs for treating chronic myeloid leukemia (CML) and fungal infections, respectively, but both suffer from large exposure differences and narrow therapeutic windows. Moreover, these two types of drugs are commonly used together in CML patients with fungal infections. Multiple studies and guidelines have suggested the importance of therapeutic drug monitoring (TDM) of TKIs and triazoles. Currently, methods for the simultaneous determination of both types of drugs are limited. We developed a simple, rapid, and reliable liquid chromatography-tandem mass spectrometry (LC-MS/MS) method for simultaneous quantification of three commonly used TKIs (imatinib, dasatinib, and nilotinib) and three commonly used triazoles (voriconazole, itraconazole, and posaconazole) in human plasma. The analytes were eluted on a Welch XB-C18 analytical column (50 × 2.1 mm, 5 µm) at 0.7 mL/min, using a gradient elution of 10 mM ammonium formate (A) and methanol–acetonitrile-isopropanol (80:10:10, v/v/v) containing 0.2 % formic acid (B) with a total analysis time of 3.5 min. The calibration curves were linear over the range from 20 to 4000 ng/mL for imatinib and nilotinib, from 2 to 400 ng/mL for dasatinib, and from 50 to 10,000 ng/mL for voriconazole, itraconazole, and posaconazole. Selectivity, accuracy, precision, recovery, matrix effect, and stability all met the validation requirements. The method was successfully used for TDM in CML patients who co-treated with both TKIs and triazoles. Drug-drug interaction analysis between TKIs and triazoles showed that a significant positive correlation was observed between imatinib and voriconazole, as well as dasatinib and voriconazole. Therefore, this method can be well applied in clinical TDM for patients receiving TKIs, triazoles, or both simultaneously.

酪氨酸激酶抑制剂(TKIs)和三唑类抗真菌药物分别是治疗慢性髓性白血病(CML)和真菌感染的一线药物,但这两种药物都存在暴露差异大和治疗窗口狭窄的问题。此外,这两类药物通常同时用于患有真菌感染的 CML 患者。多项研究和指南都提出了对 TKIs 和三唑类药物进行治疗药物监测 (TDM) 的重要性。目前,同时测定这两种药物的方法还很有限。我们开发了一种简单、快速、可靠的液相色谱-串联质谱(LC-MS/MS)方法,用于同时定量检测人体血浆中三种常用的 TKIs(伊马替尼、达沙替尼和尼洛替尼)和三种常用的三唑类药物(伏立康唑、伊曲康唑和泊沙康唑)。采用 Welch XB-C18 分析柱(50 × 2.1 mm,5 µm),以 0.7 mL/min 的速度,使用 10 mM 甲酸铵(A)和含 0.2 % 甲酸的甲醇-乙腈-异丙醇(80:10:10,v/v/v)(B)进行梯度洗脱,总分析时间为 3.5 分钟。伊马替尼和尼洛替尼在 20 至 4000 纳克/毫升、达沙替尼在 2 至 400 纳克/毫升、伏立康唑、伊曲康唑和泊沙康唑在 50 至 10,000 纳克/毫升范围内线性关系良好。选择性、准确性、精密度、回收率、基质效应和稳定性均符合验证要求。该方法成功地用于同时接受TKIs和三唑类药物治疗的CML患者的TDM。TKIs与三唑类药物之间的药物相互作用分析表明,伊马替尼与伏立康唑、达沙替尼与伏立康唑之间存在显著的正相关性。因此,这种方法可以很好地应用于同时接受 TKIs、三唑类药物或两者的患者的临床 TDM。
{"title":"Simultaneous determination of three tyrosine kinase inhibitors and three triazoles in human plasma by LC-MS/MS: applications to therapeutic drug monitoring and drug-drug interaction studies","authors":"Ninghong Li ,&nbsp;Lu Liu ,&nbsp;Dong Liu ,&nbsp;Hengyi Yu ,&nbsp;Guangjie Yang ,&nbsp;Lihui Qiu ,&nbsp;Yufei Chen ,&nbsp;Dong Xiang ,&nbsp;Xuepeng Gong","doi":"10.1016/j.jchromb.2024.124276","DOIUrl":"10.1016/j.jchromb.2024.124276","url":null,"abstract":"<div><p>Tyrosine kinase inhibitors (TKIs) and triazole antifungals are the first-line drugs for treating chronic myeloid leukemia (CML) and fungal infections, respectively, but both suffer from large exposure differences and narrow therapeutic windows. Moreover, these two types of drugs are commonly used together in CML patients with fungal infections. Multiple studies and guidelines have suggested the importance of therapeutic drug monitoring (TDM) of TKIs and triazoles. Currently, methods for the simultaneous determination of both types of drugs are limited. We developed a simple, rapid, and reliable liquid chromatography-tandem mass spectrometry (LC-MS/MS) method for simultaneous quantification of three commonly used TKIs (imatinib, dasatinib, and nilotinib) and three commonly used triazoles (voriconazole, itraconazole, and posaconazole) in human plasma. The analytes were eluted on a Welch XB-C<sub>18</sub> analytical column (50 × 2.1 mm, 5 µm) at 0.7 mL/min, using a gradient elution of 10 mM ammonium formate (A) and methanol–acetonitrile-isopropanol (80:10:10, <em>v</em>/<em>v</em>/<em>v</em>) containing 0.2 % formic acid (B) with a total analysis time of 3.5 min. The calibration curves were linear over the range from 20 to 4000 ng/mL for imatinib and nilotinib, from 2 to 400 ng/mL for dasatinib, and from 50 to 10,000 ng/mL for voriconazole, itraconazole, and posaconazole. Selectivity, accuracy, precision, recovery, matrix effect, and stability all met the validation requirements. The method was successfully used for TDM in CML patients who co-treated with both TKIs and triazoles. Drug-drug interaction analysis between TKIs and triazoles showed that a significant positive correlation was observed between imatinib and voriconazole, as well as dasatinib and voriconazole. Therefore, this method can be well applied in clinical TDM for patients receiving TKIs, triazoles, or both simultaneously.</p></div>","PeriodicalId":348,"journal":{"name":"Journal of Chromatography B","volume":"1246 ","pages":"Article 124276"},"PeriodicalIF":2.8,"publicationDate":"2024-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142087402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification and simultaneous quantification of potential genotoxic impurities in first-line HIV drug dolutegravir sodium using fast ultrasonication-assisted extraction method coupled with GC–MS and in-silico toxicity assessment 利用快速超声辅助萃取法结合气相色谱-质谱联用仪和体内毒性评估,鉴定并同时定量分析一线艾滋病毒药物多鲁特韦钠中潜在的基因毒性杂质
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-15 DOI: 10.1016/j.jchromb.2024.124275
Elumalai Sambandan , Kathavarayan Thenmozhi , G. Santosh , Chun-Chi Wang , Pei-Chien Tsai , Swapnil Gurrani , Sellappan Senthilkumar , Yi-Hsun Chen , Vinoth Kumar Ponnusamy

Dolutegravir (DLG) has become a distinctive first-line antiretroviral therapy for the treatment of HIV in most countries due to its affordability, high efficacy, and low drug-drug interactions. However, the evaluation of genotoxic impurities (GTIs) in DLG and their toxicity assessment has not been explored thoroughly. Thus, in this study, a simple, fast, and selective analytical methodology was developed for the identification and determination of 7 GTIs in the comprehensive, explicit route of synthesis for the dolutegravir sodium (DLG-Na) drug. A facile, fast ultrasonication-assisted liquid–liquid extraction procedure was adapted to isolate the GTIs in DLG-Na and then analyzed using the gas chromatography (GC)-electron impact (EI)/mass spectrometer (MS) quantification (using selective ion monitoring mode) technique. This EI-GC/MS method was validated as per the current requirements of ICH Q2 (R1) guidelines. Under optimal method conditions, excellent linearities were achieved with R between 0.9959 and 0.9995, and high sensitivity was obtained in terms of detection limits (LOD) between 0.15 to 0.63 µg/g, and quantification limits (LOQ) between 0.45 to 1.66 µg/g for the seven GTIs in DLG. The obtained recoveries ranged from 98.2 to 104.3 % at LOQ, 15 µg/g, and 18 µg/g concentration levels (maximum daily dose of 100 mg). This developed and validated method is rapid, easy to adopt, specific, sensitive, and accurate in estimating the seven GTIs in a relatively complex sodium matrix of the DLG-Na drug moiety. As a method application, two different manufactured samples of DLG-Na drug substances were analyzed for the fate of the GTIs and drug safety for the intended dosage applications. Moreover, an in-silico QSAR toxicity prediction assessment was carried out to prove scientifically the potential GTI nature of each impurity from the alerting functional groups.

多罗替拉韦(Dolutgravir,DLG)因其价格低廉、疗效显著、药物间相互作用小等特点,已成为大多数国家治疗艾滋病的一线抗逆转录病毒疗法。然而,对 DLG 中的基因毒性杂质(GTIs)及其毒性评估的研究还不够深入。因此,本研究开发了一种简单、快速、选择性强的分析方法,用于鉴定和测定多鲁曲韦钠(DLG-Na)药物综合明确合成路线中的 7 种 GTIs。该方法采用简便、快速的超声辅助液液萃取程序分离出 DLG-Na 中的 GTIs,然后使用气相色谱(GC)-电子碰撞(EI)/质谱仪(MS)定量(使用选择性离子监测模式)技术进行分析。该 EI-GC/MS 方法按照现行的 ICH Q2 (R1) 指南要求进行了验证。在最佳方法条件下,该方法的线性关系良好,R值介于0.9959和0.9995之间;灵敏度高,对DLG中的7种GTI的检出限(LOD)介于0.15至0.63 µg/g之间,定量限(LOQ)介于0.45至1.66 µg/g之间。在LOQ、15微克/克和18微克/克浓度水平(最大日剂量为100毫克)下,回收率为98.2%至104.3%。该方法快速、简便、特异、灵敏、准确,可在相对复杂的DLG-Na药物钠基质中准确测定7种GTI。应用该方法对两种不同的DLG-Na药物样品进行了分析,以确定GTIs的去向和药物在预期剂量应用中的安全性。此外,该方法还进行了室内 QSAR 毒性预测评估,以科学地证明每种杂质的警戒官能团可能具有 GTI 性质。
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引用次数: 0
Transcriptome combined with single cell to explore hypoxia-related biomarkers in osteoarthritis 转录组与单细胞相结合,探索骨关节炎中与缺氧相关的生物标记物
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-15 DOI: 10.1016/j.jchromb.2024.124274
Xingyu Liu , Guangdi Li , Riguang Liu , Lanqing Yang , Long Li , Ashutosh Goswami , Keqi Deng , Lianghong Dong , Hao Shi , Xiaoyong He

Osteoarthritis (OA) is a prevalent degenerative condition among the elderly on a global scale. Research has demonstrated that hypoxia can promote chondrocyte apoptosis and autophagy leading to OA. Hence, it was vital to screen the hypoxia related biomarkers in OA. We introduced transcriptome data to screen out differentially expressed genes (DEGs) in GSE114007 and GSE57218 (OA samples vs control samples). We performed differential expression analysis in key annotated cell to obtain differentially expressed marker genes at the single-cell level (GSE169454). Venn diagram was executed to identify hypoxia related differentially expressed genes (HR-DEGs) associated with OA. Further, feature genes were obtained through the application of least absolute shrinkage and selection operator (LASSO) regression and the Random Forest (RF) algorithm. Receiver operating characteristic (ROC) and expression level analysis were used to identify hypoxia related biomarkers in OA. We further performed immune infiltration and gene set enrichment analysis (GSEA) based on hypoxia related biomarkers. Finally, we analyzed the expression of biomarkers in single-cell level. We identified 2351 DEGs associated with OA. At the single-cell level, 242 differentially expressed marker genes were obtained. 12 HR-DEGs were retained venn diagram. Subsequently, three hypoxia related biomarkers (ADM, DDIT3 and MAFF) were identified. Moreover, we got 15 significantly different immune cells. Finally, we found a lower expression of ADM, DDIT3 and MAFF in OA group compared to the control group in ECs. Overall, we obtained three hypoxia related biomarkers (ADM, DDIT3 and MAFF) associated with OA, which established a theoretical basis for addressing OA.

骨关节炎(OA)是全球老年人中普遍存在的一种退化性疾病。研究表明,缺氧可促进软骨细胞凋亡和自噬,从而导致 OA。因此,筛选 OA 中与缺氧相关的生物标志物至关重要。我们引入转录组数据,在 GSE114007 和 GSE57218(OA 样本与对照样本)中筛选出差异表达基因(DEGs)。我们对关键注释细胞进行了差异表达分析,以获得单细胞水平的差异表达标记基因(GSE169454)。通过文氏图来识别与 OA 相关的缺氧相关差异表达基因(HR-DEGs)。此外,通过应用最小绝对收缩和选择算子(LASSO)回归和随机森林(RF)算法获得特征基因。接收者操作特征(ROC)和表达水平分析被用来识别OA中与缺氧相关的生物标记物。我们根据缺氧相关生物标志物进一步进行了免疫浸润和基因组富集分析(GSEA)。最后,我们分析了生物标志物在单细胞水平的表达。我们发现了 2351 个与 OA 相关的 DEGs。在单细胞水平上,我们获得了 242 个差异表达的标记基因。12个HR-DEG被保留在维恩图中。随后,我们发现了三个与缺氧相关的生物标志物(ADM、DDIT3 和 MAFF)。此外,我们还发现了 15 种明显不同的免疫细胞。最后,我们发现与对照组相比,OA 组 ECs 中 ADM、DDIT3 和 MAFF 的表达较低。总之,我们获得了与 OA 相关的三种缺氧相关生物标志物(ADM、DDIT3 和 MAFF),为解决 OA 问题奠定了理论基础。
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引用次数: 0
Quantitative determination of liposomal irinotecan and SN-38 concentrations in plasma samples from children with solid tumors: Use of a cryoprotectant solution to enhance liposome stability 定量测定实体瘤患儿血浆样本中脂质体伊立替康和SN-38的浓度:使用低温保护剂溶液增强脂质体的稳定性。
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-14 DOI: 10.1016/j.jchromb.2024.124273
Sreenath Nair , Nicholas S. Selvo , Abigail Stolarski , Brandon Klee , Sara M. Federico , Clinton F. Stewart

Preclinical studies have demonstrated that liposomal irinotecan (CPT-11), a topoisomerase I inhibitor, has broad activity against adult cancers, including pancreatic, gastric, colon, lung, glioma, ovarian, and breast cancer. Encapsulation of irinotecan into liposomes can modify its pharmacokinetic properties dramatically. Also, the pharmacokinetic profiles of liposomal drug formulations are not fully understood; thus, bioanalytical methods are needed to separate and quantify nonencapsulated vs. encapsulated concentrations. In this study, two robust, specific, and sensitive LC-MS/MS methods were developed and validated to separate and quantify the nonencapsulated CPT-11 (NE-CPT-11) from the sum-total CPT-11 (T-CPT-11) and its major metabolite, SN-38, in human plasma after intravenous administration of liposomal irinotecan. NE-CPT-11 and SN-38 were separated from plasma samples by using solid-phase extraction, and T-CPT-11 was measured by protein precipitation. The liposomal CPT-11 formulation was unstable during sample storage and handling, resulting in elevated NE-CPT-11 concentration. To improve the stability of liposomal CPT-11, a cryoprotectant solution was added to human plasma samples prior to storage and processing. CPT-11, SN-38, and their respective internal standards, CPT-11-d10 and SN-38-d3, were chromatographically separated on a reversed-phase C18 analytical column. The drugs were detected on a triple quadrupole mass spectrometer in the positive MRM ion mode by monitoring the transitions 587.3 > 124.1 (CPT-11) and 393.0 > 349.1 (SN-38). The calibration curves demonstrated a good fit across the concentration ranges of 10–5000 ng/mL for T-CPT-11, 2.5–250 ng/mL for NE-CPT-11, and 1–500 ng/mL for SN-38. The accuracy and precision were within the acceptable limits, matrix effects were nonsignificant, recoveries were consistent and reproducible, and the analytes were stable under all tested storage conditions. Finally, the LC-MS/MS methods were successfully applied in a phase I clinical pharmacokinetic study of nanoliposomal irinotecan (Onivyde®) in pediatric patients with recurrent solid malignancies or Ewing sarcoma.

临床前研究表明,脂质体伊立替康(CPT-11)是一种拓扑异构酶 I 抑制剂,对成人癌症(包括胰腺癌、胃癌、结肠癌、肺癌、胶质瘤、卵巢癌和乳腺癌)具有广泛的活性。将伊立替康封装到脂质体中可显著改变其药代动力学特性。此外,人们对脂质体药物制剂的药代动力学特征还不完全了解,因此需要生物分析方法来分离和量化非包封浓度与包封浓度。本研究开发并验证了两种稳健、特异、灵敏的 LC-MS/MS 方法,用于分离和定量静脉注射脂质体伊立替康后人体血浆中的非胶囊化 CPT-11(NE-CPT-11)、CPT-11 总和(T-CPT-11)及其主要代谢物 SN-38。采用固相萃取法从血浆样本中分离出 NE-CPT-11 和 SN-38,并通过蛋白沉淀法测定 T-CPT-11。脂质体CPT-11制剂在样品储存和处理过程中不稳定,导致NE-CPT-11浓度升高。为了提高脂质体 CPT-11 的稳定性,在储存和处理人体血浆样本之前,在样本中加入了低温保护剂溶液。CPT-11、SN-38 及其各自的内标物 CPT-11-d10 和 SN-38-d3 在反相 C18 分析柱上进行色谱分离。通过监测 587.3 > 124.1(CPT-11)和 393.0 > 349.1(SN-38)跃迁,在三重四极杆质谱仪的正向 MRM 离子模式下检测药物。在 T-CPT-11 为 10-5000 纳克/毫升、NE-CPT-11 为 2.5-250 纳克/毫升和 SN-38 为 1-500 纳克/毫升的浓度范围内,校准曲线显示出良好的拟合效果。准确度和精密度均在可接受范围内,基质效应不明显,回收率一致且可重复,分析物在所有测试的储存条件下均稳定。最后,LC-MS/MS 方法成功应用于纳米脂质体伊立替康(Onivyde®)在复发性实体恶性肿瘤或尤文肉瘤儿科患者中的 I 期临床药代动力学研究。
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引用次数: 0
An innovative UPLC-MS/MS method for the quantitation and pharmacokinetics of eupafolin in rat plasma 一种创新的 UPLC-MS/MS 方法用于大鼠血浆中 eupafolin 的定量和药代动力学分析
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-06 DOI: 10.1016/j.jchromb.2024.124272
Mengming Xia , Shunjun Ma , Ying Wang , Dizhong Chen , Lai Jiang , Congcong Wen , Guangliang Wu , Xianqin Wang

In this experiment, a rapid and highly sensitive ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) technology was established and validated for the quantitation and pharmacokinetic analysis of eupafolin in rat plasma, utilizing licochalcone B as internal standard (IS). After liquid–liquid extraction of the analyte samples by ethyl acetate, chromatographic separation was achieved using a UPLC HSS T3 column under gradient elution conditions, with the mobile phase consisting of acetonitrile and water (with 0.1 % formic acid). Eupafolin was quantified by multiple reaction monitoring (MRM) in electrospray positive-ion mode (ESI+), employing the mass transition m/z 315.2 → 300.3 for eupafolin and m/z 285.4 → 270.3 for IS. Eupafolin demonstrated excellent linear relationship (r > 0.99) over the concentration range of 1.25–1250 ng/mL, with the lower limit of quantification (LLOQ) of the UPLC-MS/MS assay determined as 1.25 ng/mL. Method validation followed the bioanalytical method validation criteria outlined by the FDA. The accuracy of eupafolin ranged from 86.7 % to 111.2 %, and the precision was less than 12 %. The matrix effect was observed at 92.8 %-98.6 %, while the recoveries exceeded 83.2 %. The established UPLC-MS/MS assay was successfully employed for the pharmacokinetic evaluation of eupafolin in rats. The half-lives (t1/2z) were determined to be 1.4 ± 0.4 h and 2.5 ± 1.4 h for intravenous and oral administration, respectively. Notably, the bioavailability of eupafolin was relatively low (8.3 %). The optimized UPLC-MS/MS technology showed highly sensitive, selective, and effective, rendering it suitable for the pharmacokinetics of eupafolin in preclinical practice.

本实验建立并验证了一种快速、高灵敏度的超高效液相色谱-串联质谱(UPLC-MS/MS)技术,该技术以甘草查耳酮 B 为内标(IS),用于大鼠血浆中 eupafolin 的定量和药代动力学分析。样品经乙酸乙酯液-液萃取后,使用 UPLC HSS T3 色谱柱在梯度洗脱条件下进行色谱分离,流动相为乙腈和水(含 0.1 % 甲酸)。在电喷雾正离子模式(ESI+)下,通过多反应监测(MRM)对 eupafolin 进行定量,采用的质量转换为 m/z 315.2 → 300.3,IS 为 m/z 285.4 → 270.3。在 1.25-1250 纳克/毫升的浓度范围内,尤萘福林显示出良好的线性关系(r > 0.99),UPLC-MS/MS 检测的定量下限(LLOQ)确定为 1.25 纳克/毫升。方法验证遵循 FDA 规定的生物分析方法验证标准。eupafolin 的准确度为 86.7 % 至 111.2 %,精密度低于 12 %。基质效应为 92.8%-98.6%,回收率超过 83.2%。所建立的 UPLC-MS/MS 分析方法被成功地应用于大鼠体内 eupafolin 的药代动力学评价。经测定,静脉注射和口服给药的半衰期(t1/2z)分别为 1.4 ± 0.4 h 和 2.5 ± 1.4 h。值得注意的是, eupafolin 的生物利用度相对较低(8.3%)。优化后的 UPLC-MS/MS 技术具有高灵敏度、高选择性和高效率的特点,适用于临床前研究 eupafolin 的药代动力学。
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引用次数: 0
RP-HPLC-RID analysis of InsP6 to InsP3 in Indian cereals, legumes, and their products: A comparative evaluation of PRP-1 Vs C18 column 印度谷物、豆类及其产品中 InsP6 至 InsP3 的 RP-HPLC-RID 分析:PRP-1 与 C18 色谱柱的比较评估
IF 2.8 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-08-05 DOI: 10.1016/j.jchromb.2024.124271
Chandrama Baruah , Pullakhandam Raghu , C.N. Neeraja , Raman Meenakshi Sundaram , Thingnganing Longvah , Rajendran Ananthan

Phytic acid or inositol hexakisphosphate (InsP6) and its dephosphorylated forms (InsP5, InsP4 & InsP3) are integral to cellular functions and confer several health benefits. The present study was aimed to develop a cost effective and high sample throughput RP-HPLC-RID method for routine quantification of lower inositol phosphates in both raw and processed cereals and pulses. For this a suitable mobile phase composition was formulated and two columns (Macroporus Hamilton PRP-1 Vs Waters Symmetry C18) were compared in terms of system specificity, linearity, accuracy and precision. Separation of InsP3, InsP4, InsP5 and InsP6 were recorded at 2.39, 2.93, 3.83 and 5.37 min using PRP-1column while the RT were 4.67, 5.64, 6.99 and 9.14 min with C18 column. Linearity of standards (R2 > 0.99), with an accuracy and precision ranging from 1 to 5 % was achieved. The LOD and LOQ of all InsPs were 5 and 15 μg/ml, respectively. In quality control sample InsP6 was found in highest concentration (446 ± 14.71 mg/100 g) followed by InsP5 (162 ± 8.00 mg/100 g) and InsP4 with the least concentration of 11.63 ± 1.06 mg/100 g whereas InsP3 was below detectable limit (BDL). The optimised method was used for profiling of InsPs in the raw and processed cereals and pulses consumed as staple foods in India. Processed foods contained lesser InsP6 and more of lower InsP compared to raw foods. The optimised method using unique mobile phase composition was found to yield accurate results and can used for large scale analysis of cereals and pulses and estimation of mineral nutrition potential and allied health benefits.

植酸或肌醇六磷酸酯(InsP6)及其去磷酸化形式(InsP5、InsP4 和amp;InsP3)是细胞功能不可或缺的组成部分,并具有多种健康益处。本研究旨在开发一种高性价比、高样品通量的 RP-HPLC-RID 方法,用于常规定量检测生鲜和加工谷物及豆类中的低肌醇磷酸盐。为此配制了合适的流动相组成,并对两种色谱柱(Macroporus Hamilton PRP-1 和 Waters Symmetry C18)的系统特异性、线性、准确度和精密度进行了比较。使用 PRP-1 色谱柱时,InsP3、InsP4、InsP5 和 InsP6 的分离时间分别为 2.39、2.93、3.83 和 5.37 分钟;而使用 C18 色谱柱时,分离时间分别为 4.67、5.64、6.99 和 9.14 分钟。标准品的线性关系良好(R2 > 0.99),准确度和精密度范围为 1%至 5%。所有 InsPs 的 LOD 和 LOQ 分别为 5 和 15 μg/ml 。质控样品中InsP6的浓度最高(446 ± 14.71 mg/100 g),其次是InsP5(162 ± 8.00 mg/100 g),InsP4的浓度最低,为11.63 ± 1.06 mg/100 g,而InsP3的浓度低于检测限(BDL)。该优化方法用于分析印度作为主食消费的未加工和加工谷物和豆类中的 InsPs。与未加工食品相比,加工食品中的InsP6含量较低,而低InsP含量较高。结果表明,采用独特的流动相组成的优化方法能得出准确的结果,可用于谷物和豆类的大规模分析以及矿物质营养潜力和相关健康益处的评估。
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引用次数: 0
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Journal of Chromatography B
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