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Soil-transmitted helminth infections and anemia in children attending government run schools on Samosir Island, Indonesia 印度尼西亚萨莫西尔岛公立学校儿童的土壤传播蠕虫感染和贫血问题
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-27 DOI: 10.1016/j.parepi.2024.e00344
Mara Ipa , Tri Isnani , Vierto Irennius Girsang , Amila , Ester Saripati Harianja , Yunita Purba , Toni Wandra , Christine M. Budke , Ivan Elisabeth Purba

Background

Worldwide, >654 million children live in regions where soil-transmitted helminth (STH) infections are endemic. These parasites cause a variety of symptoms, including anemia.

Methods

In May 2023, fecal and blood samples were collected from children aged 6 to 11 years attending government run (public) elementary schools in the Simanindo and Ronggur Nihuta sub-districts of Samosir Island, Indonesia where a twice a year mass drug administration (MDA) program is currently in place. A questionnaire was administered to students' parents or adult family members on possible risk factors for STH infections. Qualitative data were collected through in-depth interviews and focus group discussions.

Results

In total, 187 and 221 children in Simanindo and Ronggur Nihuta provided samples, respectively. The STH infection prevalence in Simanindo was 4.8% (9/187) and the infection prevalence in Ronggur Nihuta was 5.9% (13/221). In Simanindo, all infections were caused by Trichuris trichiura (n = 9), and in Ronggur Nihuta infections were caused by Ascaris lumbricoides (n = 6), Trichuris trichiura (n = 5), and A. lumbricoides + T. trichiura (n = 2). Three children had anemia but were negative for STH infections. While the results of the parent/adult questionnaires indicated access to a generally safe water supply and septic system, information from the in-depth interviews and focus groups revealed that the local water supply becomes greatly diminished during the dry season.

Conclusions

While MDA has been shown to effectively control roundworms and hookworms, additional measures to control trichuriasis are needed. There is also a need for the government to invest in improving the public water supply infrastructure.

背景全球有 6.54 亿儿童生活在土壤传播蠕虫(STH)感染流行的地区。方法2023年5月,研究人员在印度尼西亚萨摩西尔岛西马宁多(Samanindo)和隆古尔尼胡塔(Ronggur Nihuta)分区的政府办(公立)小学收集了6至11岁儿童的粪便和血液样本。我们向学生家长或成年家庭成员发放了一份调查问卷,内容涉及感染性传播疾病的可能风险因素。通过深入访谈和焦点小组讨论收集了定性数据。西马宁多的性传播疾病感染率为 4.8%(9/187),Ronggur Nihuta 的感染率为 5.9%(13/221)。在西马宁多,所有感染都是由毛滴虫引起的(9人),而在隆古尔尼胡塔,感染是由蛔虫(6人)、毛滴虫(5人)和蛔虫+毛滴虫(2人)引起的。三名儿童患有贫血,但性传播疾病感染呈阴性。虽然家长/成人问卷调查的结果表明当地有基本安全的供水和化粪池系统,但深入访谈和焦点小组的信息显示,当地的供水在旱季会大大减少。政府还需要投资改善公共供水基础设施。
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引用次数: 0
Community responses to corona virus disease (COVID-19) in Africa in the face of “Infodemic”: A scoping review 面对 "Infodemic",非洲社区应对电晕病毒病(COVID-19)的措施:范围审查
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-27 DOI: 10.1016/j.parepi.2024.e00345
Mikidadi Muhanga, Angela Jesse, Edwin Ngowi

Globally, Corona Virus Disease (COVID-19) has significantly affected communities in various aspects. The World Health Organization proposed different measures to prevent the pandemic. However, these measures in some instances have not effectively minimized the impacts of COVID-19, due to innumerable factors, inter alia, considerable “infodemic” related to myths, misinformation, and misconceptions. Knowledge of the “infodemic” on COVID -19 can lead to effective interventions to rid societies of COVID-19, hence reduction of COVID-19-related risks and outcomes. This article explores the “COVID-19 infodemic” that affected community responses to COVID-19 in Africa. The study employed a scoping review approach involving peer-reviewed articles from numerous search engines and databases. The keywords involved in the search query were: “COVID-19 infodemic, COVID-19 false news, COVID-19 in Africa, ‘knowledge of COVID-19, ‘myths, misinformation, and misconceptions on COVID-19, ‘history of COVID-19’, ‘community responses to COVID-19 in Africa”. Findings show that 5G technology transferred coronavirus, high temperature and alcohol can kill coronavirus, blacks are immune to COVID-19, COVID-19 vaccine development has been rushed hence not very effective and safe and also causes infertility. Diverse community responses have been registered which in some ways frustrated efforts in combating the pandemic. Therefore, the “infodemic” consisting of myths, misconceptions, and misinformation have been resulting from the history of COVID-19 which first affected white people more than blacks. Also, low knowledge of how the virus is transmitted and affect human being; and the notion that COVID-19 affects richer than poor people, hence since white people are richer than black people then they were the first to be affected by the pandemic. Obviously in presence of such myths, misconceptions, and misinformation; community responses in combating COVID-19 have not been very effective in Africa. For these interventions to be effective, collective efforts involving various stakeholders to raise awareness of COVID-19 are needed.

在全球范围内,科罗娜病毒病(COVID-19)对社区造成了多方面的严重影响。世界卫生组织提出了不同的预防措施。然而,在某些情况下,这些措施并没有有效地将 COVID-19 的影响降至最低,原因不胜枚举,其中包括与神话、错误信息和误解有关的大量 "信息流行病"。了解 COVID-19 的 "信息流行病 "可以采取有效的干预措施,使社会摆脱 COVID-19,从而减少与 COVID-19 相关的风险和后果。本文探讨了影响非洲社区应对 COVID-19 的 "COVID-19 流行病"。本研究采用了范围审查的方法,涉及众多搜索引擎和数据库中的同行评审文章。搜索关键词包括COVID-19 信息流行、COVID-19 虚假新闻、非洲的 COVID-19、"对 COVID-19 的了解"、"关于 COVID-19 的神话、错误信息和误解"、"COVID-19 的历史"、"非洲社区对 COVID-19 的反应"。研究结果表明,5G 技术转移了冠状病毒,高温和酒精可以杀死冠状病毒,黑人对 COVID-19 免疫,COVID-19 疫苗的开发过于仓促,因此不是非常有效和安全,而且还会导致不育。社区的反应多种多样,这在某种程度上挫伤了抗击大流行病的努力。因此,由神话、误解和错误信息组成的 "信息流行病 "源于 COVID-19 的历史,它首先影响的是白人而非黑人。此外,人们对病毒的传播方式和对人类的影响知之甚少;还有一种观念认为,COVID-19 对富人的影响大于穷人,因此,既然白人比黑人富有,那么他们就会最先受到这种流行病的影响。显然,由于存在这些神话、误解和错误信息,在非洲,社区应对 COVID-19 的措施并不十分有效。要使这些干预措施行之有效,需要各利益相关方共同努力,提高人们对 COVID-19 的认识。
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引用次数: 0
Impact of repeated mass ivermectin administration using a community directed approach on L. loa infection in Chrysops silacea of the rain forest and forest savanna of Cameroon 喀麦隆热带雨林和森林稀树草原中反复大量施用伊维菌素对 Chrysops silacea L. loa 感染的影响
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-17 DOI: 10.1016/j.parepi.2024.e00343
Glory N. Amambo , Fanny F. Fombad , Patrick W. Chounna Ndongmo , Raphael Awah Abong , Abdel Jelil Njouendou , Amuam Andrew Beng , Theobald Mue Nji , Mathias Eyong Esum , Jerome Fru-Cho , Ritter Manuel , Deribe Kebede , Peter Ivo Enyong , Achim Hoerauf , Benjamin Koudou , Moses Bockarie , Samuel Wanji

Background

Loiasis is an endemic filarial infection in the rainforest zone of West and Central Africa. Repeated annual community-directed treatment with ivermectin (CDTI) delivered for several years to control onchocerciasis has been shown to reduce the prevalence and intensity of Loiasis in some Loa loa-Onchocerca volvulus co-endemic areas. However, the impact of these multiple rounds of CDTI on entomological indicators of loiasis transmission is not known, and was therefore assessed in this study in areas with contrasting histories of CDTI.

Methods

The study was conducted in the East, North-west and South-west 1 CDTI project sites of Cameroon. Two communities per CDTI project were selected for fly collection and dissection. Ivermectin treatment coverage was documented in these areas, and this was correlated to Chrysops infection and infective rates. A total of 7029 female Chrysops were collected from 6 communities of the 3 CDTI projects (East, North-west, and South-west 1) and from 2 communities in a non-CDTI district (East).

Results

Chrysops biting densities and parous rates were significantly reduced in the North-west and South-west sites post-CDTI, while in the East, biting densities were similar in non-CDTI and CDTI sites, with higher parous rates observed in the non-CDTI site. Infection and infective rates in the East non-CDTI site were 4.4% and 1.8% respectively, as compared to 3.3% and 1.3% in the CDTI site after 10 ivermectin rounds (there were no baseline data for the latter). In the North-west site, significant reductions in Chrysops infection and infective rates from 10.2% and 4.2% respectively, to 3.5% and 1.2 (after 9 rounds of ivermectin treatment), were recorded following CDTI. In the South-west, infection rate significantly increased from 1.74% to 2.8% and infective rate remained statistically unchanged after 14 rounds of CDTI (0.45% - 0.40%). Similar trends in Mean Head L3 were observed except in the East site where this indicator was similar in both CDTI and control sites. Only in the North-west site did monthly transmission potentials decrease significantly.

Conclusion

This study demonstrated that the impact of repeated annual treatment with ivermectin for the control of onchocerciasis using community directed delivery approach on the entomological indicators of loiasis varies with bioecological zones. Community directed treatment with ivermectin induced a significant reduction in the entomological indicators of loiasis in the North-West project site which lies in forest savanna area. A non-significant decrease was observed in the East project site and in contrast, a significant increase was observed in the South-West 1 project site which both lies in the rainforest zones.

背景卢阿丝虫病是非洲西部和中部雨林地区的一种地方性丝虫感染。在一些 Loa loa-Onchocerca volvulus 共同流行的地区,每年重复使用伊维菌素(CDTI)进行社区治疗以控制盘尾丝虫病,并持续数年之久,这已被证明能够降低 Loa loa-Onchocerca volvulus 的流行率和感染强度。然而,这些多轮 CDTI 对罗亚斯病传播的昆虫学指标的影响尚不清楚,因此,本研究对具有截然不同的 CDTI 历史的地区进行了评估。每个 CDTI 项目选择两个社区进行苍蝇收集和解剖。对这些地区的伊维菌素治疗覆盖率进行了记录,并将伊维菌素治疗覆盖率与蛹虫草感染率和感染率相关联。从 3 个 CDTI 项目(东部、西北部和西南部 1 个)的 6 个社区以及非 CDTI 地区(东部)的 2 个社区共收集了 7029 只雌性金眼蝇。结果 CDTI 后,西北部和西南部地区的金眼蝇叮咬密度和副蝇率显著降低,而在东部,非 CDTI 地区和 CDTI 地区的叮咬密度相似,但非 CDTI 地区的副蝇率更高。东部非 CDTI 地点的感染率和感染率分别为 4.4% 和 1.8%,而 CDTI 地点在使用 10 次伊维菌素后的感染率和感染率分别为 3.3% 和 1.3%(后者没有基线数据)。在西北地区,在 CDTI 后,金龟子感染率和感染率分别从 10.2% 和 4.2% 显著降至 3.5% 和 1.2(经过 9 轮伊维菌素治疗)。在西南部,感染率从 1.74% 显著上升至 2.8%,而感染率在 14 轮 CDTI 后在统计上保持不变(0.45% - 0.40%)。除东部地区外,其他地区的平均头 L3 也呈现出类似的趋势。只有西北部地区的月传播潜力显著下降。结论这项研究表明,采用社区指导方法每年多次使用伊维菌素治疗盘尾丝虫病,对不同生物生态区域盘尾丝虫病昆虫学指标的影响各不相同。在位于森林稀树草原地区的西北项目点,伊维菌素的社区指导治疗显著降低了盘尾丝虫病的昆虫学指标。东部项目点的昆虫学指标下降不明显,而西南 1 个项目点的昆虫学指标则明显增加,这两个项目点都位于热带雨林区。
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引用次数: 0
Spatial and temporal trends of dengue infections in Curaçao: A 21-year analysis 库拉索岛登革热感染的时空趋势:21 年分析
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00338
Bart Roelofs , Daniella Vos , Yaskara Halabi , Izzy Gerstenbluth , Ashley Duits , Maria E. Grillet , Adriana Tami , Maria F. Vincenti-Gonzalez

Dengue viruses are a significant global health concern, causing millions of infections annually and putting approximately half of the world's population at risk, as reported by the World Health Organization (WHO). Understanding the spatial and temporal patterns of dengue virus spread is crucial for effective prevention of future outbreaks. By investigating these patterns, targeted dengue surveillance and control measures can be improved, aiding in the management of outbreaks in dengue-affected regions. Curaçao, where dengue is endemic, has experienced frequent outbreaks over the past 25 years. To examine the spatial and temporal trends of dengue outbreaks in Curaçao, this study employs an interdisciplinary and multi-method approach. Data on >6500 cases of dengue infections in Curaçao between the years 1995 and 2016 were used. Temporal and spatial statistics were applied. The Moran's I index identified the presence of spatial autocorrelation for incident locations, allowing us to reject the null hypothesis of spatial randomness. The majority of cases were recorded in highly populated areas and a relationship was observed between population density and dengue cases. Temporal analysis demonstrated that cases mostly occurred from October to January, during the rainy season. Lower average temperatures, higher precipitation and a lower sea surface temperature appear to be related to an increase in dengue cases. This effect has a direct link to La Niña episodes, which is the cooling phase of El Niño Southern Oscillation. The spatial and temporal analyses conducted in this study are fundamental to understanding the timing and locations of outbreaks, and ultimately improving dengue outbreak management.

根据世界卫生组织(WHO)的报告,登革热病毒是一个重大的全球健康问题,每年造成数百万人感染,使世界上大约一半的人口处于危险之中。了解登革热病毒传播的时空模式对于有效预防未来疫情爆发至关重要。通过调查这些模式,可以改进有针对性的登革热监测和控制措施,帮助管理登革热疫区的疫情。库拉索岛是登革热的流行区,在过去 25 年里频繁爆发登革热疫情。为了研究登革热在库拉索岛爆发的空间和时间趋势,本研究采用了跨学科和多方法的方法。研究使用了 1995 年至 2016 年库拉索岛 6500 例登革热感染病例的数据。采用了时间和空间统计方法。莫兰 I 指数确定了事件发生地点存在空间自相关性,使我们能够拒绝空间随机性的零假设。大多数病例都发生在人口稠密地区,而且人口密度与登革热病例之间存在一定的关系。时间分析表明,登革热病例主要发生在 10 月至次年 1 月的雨季。平均气温降低、降水量增加和海面温度降低似乎与登革热病例增加有关。这种影响与拉尼娜现象直接相关,拉尼娜现象是厄尔尼诺南方涛动的降温阶段。这项研究中进行的时空分析对于了解登革热爆发的时间和地点以及最终改善登革热爆发管理至关重要。
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引用次数: 0
Where will pediatric praziquantel be needed in Tanzania? Geographical variation in prevalence, and risk factors of Schistosoma mansoni in pre-school aged children in southern and north-western Tanzania 坦桑尼亚哪些地方需要小儿吡喹酮治疗?坦桑尼亚南部和西北部学龄前儿童曼氏血吸虫流行率和风险因素的地域差异
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00337
Humphrey D. Mazigo , Emmanuela E. Ambrose , Upendo J. Mwingira

Background

Pediatric schistosomiasis has been recognized as a public health concern in schistosomiasis endemic areas of sub-Saharan Africa, including Tanzania. However, there is limited epidemiological information relating to pediatric schistosomiasis in Tanzania. Therefore, this current focused on assessing the geographical prevalence of S. mansoni infection and its associated risk factors in pre-school children (PreSAC) in southern and north-western Tanzania.

Methods

A total of 1585 PreSAC aged 1–6 years were enrolled in a cross-sectional study. A single urine and stool sample were obtained from each child and processed using point-of-care circulating cathodic (POC-CCA) antigen and Kato Katz (KK) technique. The overall prevalence of S. mansoni infection based on KK technique and POC-CCA test were 18.6% (95%CI:16.7–20.6) and 28.3% (95%CI:26.1–30.6), respectively. The overall geometrical mean eggs per gram of faeces was 110.38epg (95% CI:97.3–125.3). The age group 4–6 years had the highest prevalence (P < 0.01) of S. mansoni in both diagnostic tests and infection intensity (t = −2.8398, P < 0.005) using KK technique. On multivariable analysis, only Ukerewe district was associated with S. mansoni infection based on KK technique (aOR = 2.8 (95%CI:2.1–3.9), P < 0.001). Based on POC-CCA test, age group (4–6 years), aOR = 1.7, 95%CI:1.3–2.2, P < 0.001), Nyasa (aOR = 6.2, 95%CI:3.0–12.5, P < 0.001), Geita (aOR = 4.2, 95%CI:2.1–8.2, P < 0.001) and Ukerewe (aOR = 28.9, 95%CI:15.0–55.8, P < 0.001) districts remained independently associated with S. mansoni infection.

Conclusion

Schistosoma mansoni is a public health concern among PreSAC in the study districts and its prevalence varies from one geographical setting to another. These findings strongly support the need to include pre-school aged in preventive chemotherapy.

背景小儿血吸虫病已被认为是包括坦桑尼亚在内的撒哈拉以南非洲血吸虫病流行地区的一个公共卫生问题。然而,坦桑尼亚有关小儿血吸虫病的流行病学资料十分有限。因此,本研究重点评估坦桑尼亚南部和西北部学龄前儿童(PreSAC)感染曼森氏杆菌的地域流行率及其相关风险因素。每个儿童都采集了一份尿液和粪便样本,并使用护理点循环阴性抗原(POC-CCA)和Kato Katz(KK)技术进行了处理。根据 KK 技术和 POC-CCA 测试,曼氏沙门氏菌的总感染率分别为 18.6% (95%CI:16.7-20.6) 和 28.3% (95%CI:26.1-30.6)。每克粪便中虫卵的总几何平均数为 110.38epg(95% CI:97.3-125.3)。在使用 KK 技术进行诊断检测和感染强度(t = -2.8398,P < 0.005)时,4-6 岁年龄组的曼氏沙门氏菌感染率最高(P < 0.01)。在多变量分析中,根据 KK 技术,只有 Ukerewe 地区与曼森氏杆菌感染有关(aOR = 2.8 (95%CI:2.1-3.9),P < 0.001)。根据 POC-CCA 检验,年龄组(4-6 岁)、尼亚萨(aOR = 6.2,95%CI:3.0-12.5,P< 0.001)、盖塔(aOR = 4.2,95%CI:2.1-8.2,P< 0.001)和乌克雷韦(aOR = 28.9,95%CI:15.0-55.8,P< 0.结论曼氏弓形虫是研究地区 PreSAC 中的一个公共卫生问题,其流行率因地理环境而异。这些发现有力地支持了将学龄前儿童纳入预防性化疗的必要性。
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引用次数: 0
Asymptomatic malaria infection and its associated factors among pregnant women in Ethiopia; a systematic review and meta-analysis 埃塞俄比亚孕妇中无症状疟疾感染及其相关因素;系统回顾和荟萃分析
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00339
Gizachew Ambaw Kassie , Gedion Asnake Azeze , Amanuel Yosef Gebrekidan , Afework Alemu Lombebo , Getachew Asmare Adella , Kirubel Eshetu Haile , Getahun Dendir Welda , Amelework Gonfa Efa , Yordanos Sisay Asgedom

Background

Asymptomatic malaria during pregnancy is a significant public health concern in malaria-endemic regions, which worsens the various effects of malaria on the mother and fetus and increases maternal and neonatal mortality. To date, no meta-analysis has been conducted on asymptomatic malaria in pregnant women in Ethiopia. Thus, we aimed to estimate the pooled prevalence of asymptomatic malaria and its associated factors in pregnant women in Ethiopia.

Methods

PubMed/Medline, Google Scholar, Web of Science, Cochrane, AJOL, and Ethiopian University repositories were systematically searched to identify studies reporting the prevalence of asymptomatic malaria infection among pregnant women in Ethiopia. A random effects model was used to perform the analysis. The heterogeneity of the studies was assessed with the I-squared tests, and subgroup analyses were performed to identify the sources of heterogeneity.

Results

Ten articles with 3277 study participants were included in this review. The pooled prevalence of asymptomatic malaria infection among pregnant women in Ethiopia was 7.03% (95% CI: 6.23–9.12); I2 = 81.2%). In the species-specific pooled prevalence estimate, Plasmodium falciparum prevalence was 5.34% (95%CI: 3.38–7.3; I2 = 87.8%), and Plasmodium vivax prevalence was 1.69% (95%CI: 1.2–5; I2 = 91.5%).Not using insecticide-treated bed nets [OR = 7.36, 95% CI (2.75, 19.73)], being primi-gravida [OR = 1.86, 95% CI (1.23, 2.82)]; lack of health education about malaria prevention [OR = 6.86, 95% CI (2.90, 11.44)] were predictors of asymptomatic malaria infection during pregnancy.

Conclusion

This study revealed that asymptomatic malaria was prevalent among pregnant women in Ethiopia. This suggests that relying merely on reported symptoms may result in missed malaria cases. Therefore, regular screening and treatment protocols for malaria are recommended in antenatal care. It is also crucial to ensure that pregnant women have access to insecticide-treated bed nets and other effective malaria prevention measures.

背景在疟疾流行地区,孕期无症状疟疾是一个重大的公共卫生问题,它会加重疟疾对母亲和胎儿的各种影响,增加孕产妇和新生儿死亡率。迄今为止,尚未对埃塞俄比亚孕妇的无症状疟疾进行过元分析。因此,我们旨在估算埃塞俄比亚孕妇无症状疟疾的总体流行率及其相关因素。方法系统搜索了PubMed/Medline、Google Scholar、Web of Science、Cochrane、AJOL和埃塞俄比亚大学资料库,以确定报告埃塞俄比亚孕妇无症状疟疾感染流行率的研究。分析采用随机效应模型。研究的异质性通过 I 平方检验进行评估,并进行了亚组分析以确定异质性的来源。埃塞俄比亚孕妇无症状疟疾感染的汇总流行率为 7.03%(95% CI:6.23-9.12);I2 = 81.2%)。不使用驱虫蚊帐[OR = 7.36, 95% CI (2.75, 19.73)]、初产妇[OR = 1.86,95% CI (1.23, 2.82)];缺乏预防疟疾的健康教育[OR = 6.86,95% CI (2.90, 11.44)]是孕期无症状疟疾感染的预测因素。这表明,仅仅依靠报告症状可能会导致疟疾病例的漏诊。因此,建议在产前护理中定期筛查和治疗疟疾。确保孕妇能够获得驱虫蚊帐和其他有效的疟疾预防措施也至关重要。
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引用次数: 0
Molecular detection and characterization of Theileria annulata, Babesia bovis, and Babesia bigemina infecting cattle and buffalo in southern Egypt 对埃及南部感染牛和水牛的环状沙雷氏菌、牛巴贝斯虫和大肠巴贝斯虫进行分子检测并确定其特征
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00340
Hassan Y.A.H. Mahmoud , Abdelrahman A. Rady , Tetsuya Tanaka

Tick-borne diseases have a major adverse effect on livestock worldwide, causing enormous economic losses in meat and milk production as well threatening animal and public health. In this study, we aimed to detect and characterize piroplasms isolated from cattle and buffalo in southern Egypt, using molecular techniques. Three hundred blood samples were collected from cattle and buffalo in two governorates in southern Egypt. All 300 samples (100%) were confirmed to contain DNA, as they exhibited bands of bovine β-actin gene at the expected 227 bp for cattle and buffalo. The samples were analyzed by PCR for the presence of piroplasms, specifically Babesia bovis, Babesia bigemina, and Theileria annulata. Samples positive for the piroplasma 18S ribosomal RNA gene were further examined for two additional genes, spherical body protein 4 gene, to provide an enhanced degree of specificity for the identification of B. bovis and B. bigemina, and the major merozoite surface antigen gene for T. annulata. The infection rate for piroplasma spp. was 60/300 (20%). The positivity rates were 10.7% (32/300) for T. annulata, 5.3% (16/300) for B. bovis, and 4% (12/300) for B. bigemina. By host species, 42/150 (28%) cattle and 18/150 (12%) buffalo were positive for piroplasms. None of the isolates sequenced for the B. bovis isolates from buffalo in this study showed 100% identity with any sequence deposited in GenBank for the small subunit ribosomal RNA gene (maximum identity value = 99.74%). Similarly, no T. annulata small subunit ribosomal RNA gene sequence identified in this study exhibited 100% identity with any sequence deposited in GenBank (maximum identity value = 99.89%). The current study provides a partial sequence of the T. annulata merozoite-piroplasm surface antigen gene, as well as the B. bovis and B. bigemina spherical body protein 4 genes, in cattle and buffalo in southern Egypt, and is the first report on these piroplasma genes in cattle and buffalo in southern Egypt.

蜱传疾病对全世界的牲畜造成了严重的负面影响,给肉类和牛奶生产造成了巨大的经济损失,并威胁着动物和公众健康。在这项研究中,我们旨在利用分子技术检测和鉴定从埃及南部的牛和水牛身上分离出来的蜱虫。我们从埃及南部两个省的牛和水牛身上采集了 300 份血液样本。所有 300 份样本(100%)都被证实含有 DNA,因为它们在牛和水牛的预期 227 bp 处显示出牛 β-肌动蛋白基因条带。通过聚合酶链式反应(PCR)对样本进行了分析,以确定是否存在牛皮癣菌,特别是牛巴贝斯虫、大肠巴贝斯虫和环状毛癣菌。对螺旋体 18S 核糖体 RNA 基因呈阳性的样本还进一步检测了另外两个基因,即球形体蛋白 4 基因,以提高鉴定牛巴贝斯虫和大肠巴贝斯虫的特异性,以及环状丝虫的主要裂殖体表面抗原基因。螺浆虫属感染率为 60/300(20%)。环斑蓟马的阳性率为 10.7%(32/300),鲍曼不动杆菌的阳性率为 5.3%(16/300),比格明纳虫的阳性率为 4%(12/300)。从宿主种类来看,42/150(28%)头牛和 18/150(12%)头水牛对螺盘虫呈阳性反应。在本研究中,从水牛中分离出的牛包虫病分离物的小亚基核糖体 RNA 基因与 GenBank 中保存的任何序列都没有 100%的同一性(最大同一性值 = 99.74%)。同样,本研究中发现的 T. annulata 小亚基核糖体 RNA 基因序列与 GenBank 中的任何序列都没有 100%的同一性(最大同一性值 = 99.89%)。本研究提供了埃及南部牛和水牛中环状丝虫螺旋体表面抗原基因的部分序列,以及牛杆菌和大肠杆菌球形体蛋白 4 基因的部分序列,是有关埃及南部牛和水牛中这些螺旋体基因的首次报道。
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引用次数: 0
First official report of bed bug (Hemiptera, Cimicidae) infestations in Algeria 阿尔及利亚首次正式报告臭虫(半翅目,Cimicidae)虫害情况
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2023-12-22 DOI: 10.1016/j.parepi.2023.e00335
Thinhinane Djouaher , Mohammad Akhoundi , Omar Hamarsheh , Denis Sereno , Dahlia Chebbah , Karima Brahmi , Soumeya Chahed , Sophie Brun , Julie Jan , Arezki Izri

Background

Bed bugs are hematophagous insects with a long history of presence in human communities. Over the last three decades, infestations by bed bugs in human dwellings have drastically increased, leading to a rise in bed bug concerns. Nevertheless, very little is known about the bed bug species and their population diversity in Algeria.

Method

A pilot entomological inventory was performed in May 2019 in Tizi Ouzou, in northern Algeria. The gathered bed bug specimens were identified by morphological and molecular approaches, followed by neighbor-joining and network phylogenetic analyses.

Results

A total of seven out of 12 requested locations were allowed to inspect for bed bug infestation. Of these, three locations were found with active bed bug infestations. A total of 145 specimens belonging to different life stages [egg (21), nymph (74), adult male (17), and female (33)] were collected and analyzed using morphological and molecular approaches. The adult specimens were identified as Cimex lectularius according to specific morphological criteria, most importantly the pronotum laterally expanded with more flattened extreme margins. Morphological identification of the adults was confirmed further by conventional PCR targeting 450 bp fragment of the COI gene. All the nymphs and eggs were also molecularly identified as C. lectularius. Neighbor-Joining phylogenetic tree reconstructed with the collected specimens provides clues on the presence of two closely phylogenetic groups. The first one gathers our samples of Algeria with previously reported COI haplotype sequences from Asian, European, and North American countries. The second group encompasses a lesser-documented haplotype reported in Europe and Central America. These findings were further confirmed by network analysis.

Conclusions

These results provide evidence of established C. lectularius infestation in Algeria and its potential dispersal capacity by travelers or immigrants and will help future management of these ectoparasites.

背景臭虫是一种食血昆虫,在人类社区中存在的历史悠久。在过去的三十年里,臭虫在人类住宅中的侵扰急剧增加,导致人们对臭虫的关注度上升。然而,人们对阿尔及利亚的臭虫种类及其种群多样性知之甚少。通过形态学和分子方法对收集到的臭虫标本进行了鉴定,随后进行了邻接和网络系统发生学分析。其中有三个地点发现了活跃的臭虫。共收集了 145 个属于不同生命阶段的标本[卵(21 个)、若虫(74 个)、雄性成虫(17 个)和雌性成虫(33 个)],并采用形态学和分子学方法进行了分析。成体标本根据特定的形态学标准被鉴定为 Cimex lectularius,其中最重要的是前胸侧面膨大,极缘更加扁平。通过针对 COI 基因 450 bp 片段的常规 PCR,进一步确认了成虫的形态学鉴定。所有的若虫和卵也被分子鉴定为 C. lectularius。用采集的标本重建的邻接系统发生树提供了两个密切系统发生群存在的线索。第一个群体将阿尔及利亚的样本与之前报道的来自亚洲、欧洲和北美国家的 COI 单倍型序列集合在一起。第二组包括欧洲和中美洲报道较少的单倍型。这些结果提供了阿尔及利亚已确定的C. lectularius虫害及其潜在的旅行者或移民传播能力的证据,将有助于未来对这些体外寄生虫的管理。
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引用次数: 0
Detection of zoonotic Cryptosporidium spp. in small wild rodents using amplicon-based next-generation sequencing 利用基于扩增子的新一代测序技术检测小型野生啮齿动物中的人畜共患隐孢子虫属
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2023-12-12 DOI: 10.1016/j.parepi.2023.e00332
Rosalina Rotovnik , Tatiana Siegler Lathrop , Jakob Skov , Pikka Jokelainen , Christian Moliin Outzen Kapel , Christen Rune Stensvold

Rodents may serve as reservoirs of zoonotic species of Cryptosporidium; however, data from molecular surveys in support of this hypothesis are still scarce. In this study, we screened faeces and rectal content from murid and cricetid rodents (N = 58) caught around three farms in Zealand, Denmark, for Cryptosporidium spp. by amplicon-based next-generation sequencing (NGS) of ribosomal genes. Selected samples were further examined using nested conventional PCR targeting SSU rRNA, gp60, and actin genes. Cryptosporidium-specific DNA was identified in 40/58 (69%) samples, and in 12 (30%) of the 40 positive animals, mixed cryptosporidial infections were observed. Cryptosporidium ditrichi was the species most commonly identified, found in 28 (48%) of the animals. Cryptosporidium parvum was identified in 4 (7%) of the animals, all of which were co-infected with C. ditrichi. The present study is the first to utilize NGS-based screening for Cryptosporidium species in wild rodents. Moreover, it is the first study to provide molecular data on Cryptosporidium in rodents sampled in Denmark and to detect DNA of C. ditrichi in Mus musculus, Myodes glareolus, and Microtus agrestis. The NGS approach was successfully applied to yield new knowledge, and the results showed that zoonotic species of Cryptosporidium are common in murid and cricetid rodents in Zealand, Denmark.

啮齿类动物可能是隐孢子虫人畜共患物种的储库;然而,支持这一假设的分子调查数据仍然很少。在这项研究中,我们通过基于核糖体基因扩增子的下一代测序(NGS),对丹麦西兰岛三个农场附近捕获的鼠类和啮齿类动物(58 只)的粪便和直肠内容物进行了隐孢子虫筛查。利用针对 SSU rRNA、gp60 和肌动蛋白基因的巢式常规 PCR 对所选样本进行了进一步检测。在 40/58 份样本(69%)中鉴定出了隐孢子虫特异性 DNA,在 40 份阳性动物样本中,有 12 份(30%)观察到了隐孢子虫混合感染。在 28 只(48%)动物体内发现的隐孢子虫是最常见的物种。在 4 只(7%)动物中发现了副隐孢子虫,所有这些动物都同时感染了隐孢子虫。本研究首次利用基于 NGS 的方法筛查野生啮齿动物中的隐孢子虫。此外,本研究还首次提供了在丹麦采样的啮齿类动物中发现隐孢子虫的分子数据,并在麝、啮齿目啮齿类动物和啮齿目啮齿类动物中检测到迪特里希隐孢子虫的 DNA。NGS 方法的成功应用产生了新的知识,其结果表明,隐孢子虫的人畜共患物种在丹麦西兰岛的啮齿类动物中很常见。
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引用次数: 0
Global scenario of genetic diversity in cox1 and nad1 genes of Moniezia expansa 扩张莫尼茨绦虫 cox1 和 nad1 基因遗传多样性的全球情况
IF 3.2 Q1 Immunology and Microbiology Pub Date : 2023-12-11 DOI: 10.1016/j.parepi.2023.e00333
Ayed Alshammari , Umair Ali , Abdulbaset Mohammed Kabli , Majed H. Wakid , Muhammad Saqib , Shujaat Hussain , Warda Qamar , Mughees Aizaz Alvi

Monieziasis is a parasite-borne production-limiting disease of livestock. Moniezia expansa is the most important species having cosmopolitan distribution. Despite of numerous prevalence reports, very little information is available about the evolutionary biology and population genetics of M. expansa. To close this research gap, this study was undertaken to recognize and inspect the genetic variation of M. expansa populations around the world using the cox1 and nad1 genes and deduce phylogenetic relationships with M. expansa populations. The cox1 and nad1 gene sequences were downloaded from the NCBI GenBank database. Followed by sequence alignment, median-joining networks were constructed using PopArt software. Diversity and neutrality indices were computed through DnaSp software while MEGA software was used to draw the maximum-likelihood phylogenetic tree. Thirty-two cox1 sequences, from five different countries, and 9 nad1 sequences from three different countries, were among the sequences used in this study. The cox1 and nad1 gene sequences had mutations in 97 and 36 different places, respectively. Twenty and 7 unique haplotypes were discovered for the cox1 and nad1 gene sequences, respectively. Comparable haplotype diversities were observed for both the genes under study (cox1 = 0.950; nad1 = 0.944). Negative Tajima's D and Fu Fs were found for the cox1 gene while these indices were positive for the nad1 gene. Phylogenetic analysis also showed the existence of unique haplotypes for both the cox1 and nad1 genes. The results of this study indicate that there is the existence of a huge genetic diversity in M. expansa isolates. For future studies, it is recommended that longer gene sequences should be used to describe genetic variation among M. expansa isolates as the length of the gene under study affects the genetic variation. Moreover, additional mitochondrial markers should also be investigated because the assertive strength of a group of gene targets is superior to defining genetic diversity.

莫尼茨绦虫病是一种寄生虫传播的限制牲畜生产的疾病。扩张莫尼茨绦虫(Moniezia expansa)是最重要的一种,分布于世界各地。尽管有大量的流行报告,但有关扩张莫尼茨绦虫的进化生物学和种群遗传学的信息却很少。为了填补这一研究空白,本研究利用 cox1 和 nad1 基因识别和检测世界各地扩张莫尼茨绦虫种群的遗传变异,并推断扩张莫尼茨绦虫种群的系统发育关系。cox1 和 nad1 基因序列从 NCBI GenBank 数据库下载。序列比对后,使用 PopArt 软件构建了中位连接网络。通过 DnaSp 软件计算多样性和中性指数,并使用 MEGA 软件绘制最大似然系统发生树。本研究使用了来自五个不同国家的 32 条 cox1 序列和来自三个不同国家的 9 条 nad1 序列。cox1 和 nad1 基因序列分别在 97 个和 36 个不同位置发生了突变。在 cox1 和 nad1 基因序列中分别发现了 20 个和 7 个独特的单倍型。在所研究的两个基因中都观察到了相似的单倍型多样性(cox1 = 0.950;nad1 = 0.944)。在 cox1 基因中,Tajima's D 和 Fu Fs 均为负值,而在 nad1 基因中,这些指数均为正值。系统发育分析还显示,cox1 和 nad1 基因都存在独特的单倍型。这项研究的结果表明,扩张莫氏杆菌分离物中存在着巨大的遗传多样性。在今后的研究中,由于所研究基因的长度会影响遗传变异,因此建议使用较长的基因序列来描述扩张莫氏杆菌分离株之间的遗传变异。此外,还应该研究更多的线粒体标记,因为一组基因靶标的断言强度优于定义遗传多样性。
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Parasite Epidemiology and Control
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