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Spatial and temporal trends of dengue infections in Curaçao: A 21-year analysis 库拉索岛登革热感染的时空趋势:21 年分析
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00338
Bart Roelofs , Daniella Vos , Yaskara Halabi , Izzy Gerstenbluth , Ashley Duits , Maria E. Grillet , Adriana Tami , Maria F. Vincenti-Gonzalez

Dengue viruses are a significant global health concern, causing millions of infections annually and putting approximately half of the world's population at risk, as reported by the World Health Organization (WHO). Understanding the spatial and temporal patterns of dengue virus spread is crucial for effective prevention of future outbreaks. By investigating these patterns, targeted dengue surveillance and control measures can be improved, aiding in the management of outbreaks in dengue-affected regions. Curaçao, where dengue is endemic, has experienced frequent outbreaks over the past 25 years. To examine the spatial and temporal trends of dengue outbreaks in Curaçao, this study employs an interdisciplinary and multi-method approach. Data on >6500 cases of dengue infections in Curaçao between the years 1995 and 2016 were used. Temporal and spatial statistics were applied. The Moran's I index identified the presence of spatial autocorrelation for incident locations, allowing us to reject the null hypothesis of spatial randomness. The majority of cases were recorded in highly populated areas and a relationship was observed between population density and dengue cases. Temporal analysis demonstrated that cases mostly occurred from October to January, during the rainy season. Lower average temperatures, higher precipitation and a lower sea surface temperature appear to be related to an increase in dengue cases. This effect has a direct link to La Niña episodes, which is the cooling phase of El Niño Southern Oscillation. The spatial and temporal analyses conducted in this study are fundamental to understanding the timing and locations of outbreaks, and ultimately improving dengue outbreak management.

根据世界卫生组织(WHO)的报告,登革热病毒是一个重大的全球健康问题,每年造成数百万人感染,使世界上大约一半的人口处于危险之中。了解登革热病毒传播的时空模式对于有效预防未来疫情爆发至关重要。通过调查这些模式,可以改进有针对性的登革热监测和控制措施,帮助管理登革热疫区的疫情。库拉索岛是登革热的流行区,在过去 25 年里频繁爆发登革热疫情。为了研究登革热在库拉索岛爆发的空间和时间趋势,本研究采用了跨学科和多方法的方法。研究使用了 1995 年至 2016 年库拉索岛 6500 例登革热感染病例的数据。采用了时间和空间统计方法。莫兰 I 指数确定了事件发生地点存在空间自相关性,使我们能够拒绝空间随机性的零假设。大多数病例都发生在人口稠密地区,而且人口密度与登革热病例之间存在一定的关系。时间分析表明,登革热病例主要发生在 10 月至次年 1 月的雨季。平均气温降低、降水量增加和海面温度降低似乎与登革热病例增加有关。这种影响与拉尼娜现象直接相关,拉尼娜现象是厄尔尼诺南方涛动的降温阶段。这项研究中进行的时空分析对于了解登革热爆发的时间和地点以及最终改善登革热爆发管理至关重要。
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引用次数: 0
Where will pediatric praziquantel be needed in Tanzania? Geographical variation in prevalence, and risk factors of Schistosoma mansoni in pre-school aged children in southern and north-western Tanzania 坦桑尼亚哪些地方需要小儿吡喹酮治疗?坦桑尼亚南部和西北部学龄前儿童曼氏血吸虫流行率和风险因素的地域差异
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00337
Humphrey D. Mazigo , Emmanuela E. Ambrose , Upendo J. Mwingira

Background

Pediatric schistosomiasis has been recognized as a public health concern in schistosomiasis endemic areas of sub-Saharan Africa, including Tanzania. However, there is limited epidemiological information relating to pediatric schistosomiasis in Tanzania. Therefore, this current focused on assessing the geographical prevalence of S. mansoni infection and its associated risk factors in pre-school children (PreSAC) in southern and north-western Tanzania.

Methods

A total of 1585 PreSAC aged 1–6 years were enrolled in a cross-sectional study. A single urine and stool sample were obtained from each child and processed using point-of-care circulating cathodic (POC-CCA) antigen and Kato Katz (KK) technique. The overall prevalence of S. mansoni infection based on KK technique and POC-CCA test were 18.6% (95%CI:16.7–20.6) and 28.3% (95%CI:26.1–30.6), respectively. The overall geometrical mean eggs per gram of faeces was 110.38epg (95% CI:97.3–125.3). The age group 4–6 years had the highest prevalence (P < 0.01) of S. mansoni in both diagnostic tests and infection intensity (t = −2.8398, P < 0.005) using KK technique. On multivariable analysis, only Ukerewe district was associated with S. mansoni infection based on KK technique (aOR = 2.8 (95%CI:2.1–3.9), P < 0.001). Based on POC-CCA test, age group (4–6 years), aOR = 1.7, 95%CI:1.3–2.2, P < 0.001), Nyasa (aOR = 6.2, 95%CI:3.0–12.5, P < 0.001), Geita (aOR = 4.2, 95%CI:2.1–8.2, P < 0.001) and Ukerewe (aOR = 28.9, 95%CI:15.0–55.8, P < 0.001) districts remained independently associated with S. mansoni infection.

Conclusion

Schistosoma mansoni is a public health concern among PreSAC in the study districts and its prevalence varies from one geographical setting to another. These findings strongly support the need to include pre-school aged in preventive chemotherapy.

背景小儿血吸虫病已被认为是包括坦桑尼亚在内的撒哈拉以南非洲血吸虫病流行地区的一个公共卫生问题。然而,坦桑尼亚有关小儿血吸虫病的流行病学资料十分有限。因此,本研究重点评估坦桑尼亚南部和西北部学龄前儿童(PreSAC)感染曼森氏杆菌的地域流行率及其相关风险因素。每个儿童都采集了一份尿液和粪便样本,并使用护理点循环阴性抗原(POC-CCA)和Kato Katz(KK)技术进行了处理。根据 KK 技术和 POC-CCA 测试,曼氏沙门氏菌的总感染率分别为 18.6% (95%CI:16.7-20.6) 和 28.3% (95%CI:26.1-30.6)。每克粪便中虫卵的总几何平均数为 110.38epg(95% CI:97.3-125.3)。在使用 KK 技术进行诊断检测和感染强度(t = -2.8398,P < 0.005)时,4-6 岁年龄组的曼氏沙门氏菌感染率最高(P < 0.01)。在多变量分析中,根据 KK 技术,只有 Ukerewe 地区与曼森氏杆菌感染有关(aOR = 2.8 (95%CI:2.1-3.9),P < 0.001)。根据 POC-CCA 检验,年龄组(4-6 岁)、尼亚萨(aOR = 6.2,95%CI:3.0-12.5,P< 0.001)、盖塔(aOR = 4.2,95%CI:2.1-8.2,P< 0.001)和乌克雷韦(aOR = 28.9,95%CI:15.0-55.8,P< 0.结论曼氏弓形虫是研究地区 PreSAC 中的一个公共卫生问题,其流行率因地理环境而异。这些发现有力地支持了将学龄前儿童纳入预防性化疗的必要性。
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引用次数: 0
Asymptomatic malaria infection and its associated factors among pregnant women in Ethiopia; a systematic review and meta-analysis 埃塞俄比亚孕妇中无症状疟疾感染及其相关因素;系统回顾和荟萃分析
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00339
Gizachew Ambaw Kassie , Gedion Asnake Azeze , Amanuel Yosef Gebrekidan , Afework Alemu Lombebo , Getachew Asmare Adella , Kirubel Eshetu Haile , Getahun Dendir Welda , Amelework Gonfa Efa , Yordanos Sisay Asgedom

Background

Asymptomatic malaria during pregnancy is a significant public health concern in malaria-endemic regions, which worsens the various effects of malaria on the mother and fetus and increases maternal and neonatal mortality. To date, no meta-analysis has been conducted on asymptomatic malaria in pregnant women in Ethiopia. Thus, we aimed to estimate the pooled prevalence of asymptomatic malaria and its associated factors in pregnant women in Ethiopia.

Methods

PubMed/Medline, Google Scholar, Web of Science, Cochrane, AJOL, and Ethiopian University repositories were systematically searched to identify studies reporting the prevalence of asymptomatic malaria infection among pregnant women in Ethiopia. A random effects model was used to perform the analysis. The heterogeneity of the studies was assessed with the I-squared tests, and subgroup analyses were performed to identify the sources of heterogeneity.

Results

Ten articles with 3277 study participants were included in this review. The pooled prevalence of asymptomatic malaria infection among pregnant women in Ethiopia was 7.03% (95% CI: 6.23–9.12); I2 = 81.2%). In the species-specific pooled prevalence estimate, Plasmodium falciparum prevalence was 5.34% (95%CI: 3.38–7.3; I2 = 87.8%), and Plasmodium vivax prevalence was 1.69% (95%CI: 1.2–5; I2 = 91.5%).Not using insecticide-treated bed nets [OR = 7.36, 95% CI (2.75, 19.73)], being primi-gravida [OR = 1.86, 95% CI (1.23, 2.82)]; lack of health education about malaria prevention [OR = 6.86, 95% CI (2.90, 11.44)] were predictors of asymptomatic malaria infection during pregnancy.

Conclusion

This study revealed that asymptomatic malaria was prevalent among pregnant women in Ethiopia. This suggests that relying merely on reported symptoms may result in missed malaria cases. Therefore, regular screening and treatment protocols for malaria are recommended in antenatal care. It is also crucial to ensure that pregnant women have access to insecticide-treated bed nets and other effective malaria prevention measures.

背景在疟疾流行地区,孕期无症状疟疾是一个重大的公共卫生问题,它会加重疟疾对母亲和胎儿的各种影响,增加孕产妇和新生儿死亡率。迄今为止,尚未对埃塞俄比亚孕妇的无症状疟疾进行过元分析。因此,我们旨在估算埃塞俄比亚孕妇无症状疟疾的总体流行率及其相关因素。方法系统搜索了PubMed/Medline、Google Scholar、Web of Science、Cochrane、AJOL和埃塞俄比亚大学资料库,以确定报告埃塞俄比亚孕妇无症状疟疾感染流行率的研究。分析采用随机效应模型。研究的异质性通过 I 平方检验进行评估,并进行了亚组分析以确定异质性的来源。埃塞俄比亚孕妇无症状疟疾感染的汇总流行率为 7.03%(95% CI:6.23-9.12);I2 = 81.2%)。不使用驱虫蚊帐[OR = 7.36, 95% CI (2.75, 19.73)]、初产妇[OR = 1.86,95% CI (1.23, 2.82)];缺乏预防疟疾的健康教育[OR = 6.86,95% CI (2.90, 11.44)]是孕期无症状疟疾感染的预测因素。这表明,仅仅依靠报告症状可能会导致疟疾病例的漏诊。因此,建议在产前护理中定期筛查和治疗疟疾。确保孕妇能够获得驱虫蚊帐和其他有效的疟疾预防措施也至关重要。
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引用次数: 0
Molecular detection and characterization of Theileria annulata, Babesia bovis, and Babesia bigemina infecting cattle and buffalo in southern Egypt 对埃及南部感染牛和水牛的环状沙雷氏菌、牛巴贝斯虫和大肠巴贝斯虫进行分子检测并确定其特征
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2024-02-01 DOI: 10.1016/j.parepi.2024.e00340
Hassan Y.A.H. Mahmoud , Abdelrahman A. Rady , Tetsuya Tanaka

Tick-borne diseases have a major adverse effect on livestock worldwide, causing enormous economic losses in meat and milk production as well threatening animal and public health. In this study, we aimed to detect and characterize piroplasms isolated from cattle and buffalo in southern Egypt, using molecular techniques. Three hundred blood samples were collected from cattle and buffalo in two governorates in southern Egypt. All 300 samples (100%) were confirmed to contain DNA, as they exhibited bands of bovine β-actin gene at the expected 227 bp for cattle and buffalo. The samples were analyzed by PCR for the presence of piroplasms, specifically Babesia bovis, Babesia bigemina, and Theileria annulata. Samples positive for the piroplasma 18S ribosomal RNA gene were further examined for two additional genes, spherical body protein 4 gene, to provide an enhanced degree of specificity for the identification of B. bovis and B. bigemina, and the major merozoite surface antigen gene for T. annulata. The infection rate for piroplasma spp. was 60/300 (20%). The positivity rates were 10.7% (32/300) for T. annulata, 5.3% (16/300) for B. bovis, and 4% (12/300) for B. bigemina. By host species, 42/150 (28%) cattle and 18/150 (12%) buffalo were positive for piroplasms. None of the isolates sequenced for the B. bovis isolates from buffalo in this study showed 100% identity with any sequence deposited in GenBank for the small subunit ribosomal RNA gene (maximum identity value = 99.74%). Similarly, no T. annulata small subunit ribosomal RNA gene sequence identified in this study exhibited 100% identity with any sequence deposited in GenBank (maximum identity value = 99.89%). The current study provides a partial sequence of the T. annulata merozoite-piroplasm surface antigen gene, as well as the B. bovis and B. bigemina spherical body protein 4 genes, in cattle and buffalo in southern Egypt, and is the first report on these piroplasma genes in cattle and buffalo in southern Egypt.

蜱传疾病对全世界的牲畜造成了严重的负面影响,给肉类和牛奶生产造成了巨大的经济损失,并威胁着动物和公众健康。在这项研究中,我们旨在利用分子技术检测和鉴定从埃及南部的牛和水牛身上分离出来的蜱虫。我们从埃及南部两个省的牛和水牛身上采集了 300 份血液样本。所有 300 份样本(100%)都被证实含有 DNA,因为它们在牛和水牛的预期 227 bp 处显示出牛 β-肌动蛋白基因条带。通过聚合酶链式反应(PCR)对样本进行了分析,以确定是否存在牛皮癣菌,特别是牛巴贝斯虫、大肠巴贝斯虫和环状毛癣菌。对螺旋体 18S 核糖体 RNA 基因呈阳性的样本还进一步检测了另外两个基因,即球形体蛋白 4 基因,以提高鉴定牛巴贝斯虫和大肠巴贝斯虫的特异性,以及环状丝虫的主要裂殖体表面抗原基因。螺浆虫属感染率为 60/300(20%)。环斑蓟马的阳性率为 10.7%(32/300),鲍曼不动杆菌的阳性率为 5.3%(16/300),比格明纳虫的阳性率为 4%(12/300)。从宿主种类来看,42/150(28%)头牛和 18/150(12%)头水牛对螺盘虫呈阳性反应。在本研究中,从水牛中分离出的牛包虫病分离物的小亚基核糖体 RNA 基因与 GenBank 中保存的任何序列都没有 100%的同一性(最大同一性值 = 99.74%)。同样,本研究中发现的 T. annulata 小亚基核糖体 RNA 基因序列与 GenBank 中的任何序列都没有 100%的同一性(最大同一性值 = 99.89%)。本研究提供了埃及南部牛和水牛中环状丝虫螺旋体表面抗原基因的部分序列,以及牛杆菌和大肠杆菌球形体蛋白 4 基因的部分序列,是有关埃及南部牛和水牛中这些螺旋体基因的首次报道。
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引用次数: 0
First official report of bed bug (Hemiptera, Cimicidae) infestations in Algeria 阿尔及利亚首次正式报告臭虫(半翅目,Cimicidae)虫害情况
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-12-22 DOI: 10.1016/j.parepi.2023.e00335
Thinhinane Djouaher , Mohammad Akhoundi , Omar Hamarsheh , Denis Sereno , Dahlia Chebbah , Karima Brahmi , Soumeya Chahed , Sophie Brun , Julie Jan , Arezki Izri

Background

Bed bugs are hematophagous insects with a long history of presence in human communities. Over the last three decades, infestations by bed bugs in human dwellings have drastically increased, leading to a rise in bed bug concerns. Nevertheless, very little is known about the bed bug species and their population diversity in Algeria.

Method

A pilot entomological inventory was performed in May 2019 in Tizi Ouzou, in northern Algeria. The gathered bed bug specimens were identified by morphological and molecular approaches, followed by neighbor-joining and network phylogenetic analyses.

Results

A total of seven out of 12 requested locations were allowed to inspect for bed bug infestation. Of these, three locations were found with active bed bug infestations. A total of 145 specimens belonging to different life stages [egg (21), nymph (74), adult male (17), and female (33)] were collected and analyzed using morphological and molecular approaches. The adult specimens were identified as Cimex lectularius according to specific morphological criteria, most importantly the pronotum laterally expanded with more flattened extreme margins. Morphological identification of the adults was confirmed further by conventional PCR targeting 450 bp fragment of the COI gene. All the nymphs and eggs were also molecularly identified as C. lectularius. Neighbor-Joining phylogenetic tree reconstructed with the collected specimens provides clues on the presence of two closely phylogenetic groups. The first one gathers our samples of Algeria with previously reported COI haplotype sequences from Asian, European, and North American countries. The second group encompasses a lesser-documented haplotype reported in Europe and Central America. These findings were further confirmed by network analysis.

Conclusions

These results provide evidence of established C. lectularius infestation in Algeria and its potential dispersal capacity by travelers or immigrants and will help future management of these ectoparasites.

背景臭虫是一种食血昆虫,在人类社区中存在的历史悠久。在过去的三十年里,臭虫在人类住宅中的侵扰急剧增加,导致人们对臭虫的关注度上升。然而,人们对阿尔及利亚的臭虫种类及其种群多样性知之甚少。通过形态学和分子方法对收集到的臭虫标本进行了鉴定,随后进行了邻接和网络系统发生学分析。其中有三个地点发现了活跃的臭虫。共收集了 145 个属于不同生命阶段的标本[卵(21 个)、若虫(74 个)、雄性成虫(17 个)和雌性成虫(33 个)],并采用形态学和分子学方法进行了分析。成体标本根据特定的形态学标准被鉴定为 Cimex lectularius,其中最重要的是前胸侧面膨大,极缘更加扁平。通过针对 COI 基因 450 bp 片段的常规 PCR,进一步确认了成虫的形态学鉴定。所有的若虫和卵也被分子鉴定为 C. lectularius。用采集的标本重建的邻接系统发生树提供了两个密切系统发生群存在的线索。第一个群体将阿尔及利亚的样本与之前报道的来自亚洲、欧洲和北美国家的 COI 单倍型序列集合在一起。第二组包括欧洲和中美洲报道较少的单倍型。这些结果提供了阿尔及利亚已确定的C. lectularius虫害及其潜在的旅行者或移民传播能力的证据,将有助于未来对这些体外寄生虫的管理。
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引用次数: 0
Detection of zoonotic Cryptosporidium spp. in small wild rodents using amplicon-based next-generation sequencing 利用基于扩增子的新一代测序技术检测小型野生啮齿动物中的人畜共患隐孢子虫属
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-12-12 DOI: 10.1016/j.parepi.2023.e00332
Rosalina Rotovnik , Tatiana Siegler Lathrop , Jakob Skov , Pikka Jokelainen , Christian Moliin Outzen Kapel , Christen Rune Stensvold

Rodents may serve as reservoirs of zoonotic species of Cryptosporidium; however, data from molecular surveys in support of this hypothesis are still scarce. In this study, we screened faeces and rectal content from murid and cricetid rodents (N = 58) caught around three farms in Zealand, Denmark, for Cryptosporidium spp. by amplicon-based next-generation sequencing (NGS) of ribosomal genes. Selected samples were further examined using nested conventional PCR targeting SSU rRNA, gp60, and actin genes. Cryptosporidium-specific DNA was identified in 40/58 (69%) samples, and in 12 (30%) of the 40 positive animals, mixed cryptosporidial infections were observed. Cryptosporidium ditrichi was the species most commonly identified, found in 28 (48%) of the animals. Cryptosporidium parvum was identified in 4 (7%) of the animals, all of which were co-infected with C. ditrichi. The present study is the first to utilize NGS-based screening for Cryptosporidium species in wild rodents. Moreover, it is the first study to provide molecular data on Cryptosporidium in rodents sampled in Denmark and to detect DNA of C. ditrichi in Mus musculus, Myodes glareolus, and Microtus agrestis. The NGS approach was successfully applied to yield new knowledge, and the results showed that zoonotic species of Cryptosporidium are common in murid and cricetid rodents in Zealand, Denmark.

啮齿类动物可能是隐孢子虫人畜共患物种的储库;然而,支持这一假设的分子调查数据仍然很少。在这项研究中,我们通过基于核糖体基因扩增子的下一代测序(NGS),对丹麦西兰岛三个农场附近捕获的鼠类和啮齿类动物(58 只)的粪便和直肠内容物进行了隐孢子虫筛查。利用针对 SSU rRNA、gp60 和肌动蛋白基因的巢式常规 PCR 对所选样本进行了进一步检测。在 40/58 份样本(69%)中鉴定出了隐孢子虫特异性 DNA,在 40 份阳性动物样本中,有 12 份(30%)观察到了隐孢子虫混合感染。在 28 只(48%)动物体内发现的隐孢子虫是最常见的物种。在 4 只(7%)动物中发现了副隐孢子虫,所有这些动物都同时感染了隐孢子虫。本研究首次利用基于 NGS 的方法筛查野生啮齿动物中的隐孢子虫。此外,本研究还首次提供了在丹麦采样的啮齿类动物中发现隐孢子虫的分子数据,并在麝、啮齿目啮齿类动物和啮齿目啮齿类动物中检测到迪特里希隐孢子虫的 DNA。NGS 方法的成功应用产生了新的知识,其结果表明,隐孢子虫的人畜共患物种在丹麦西兰岛的啮齿类动物中很常见。
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引用次数: 0
Global scenario of genetic diversity in cox1 and nad1 genes of Moniezia expansa 扩张莫尼茨绦虫 cox1 和 nad1 基因遗传多样性的全球情况
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-12-11 DOI: 10.1016/j.parepi.2023.e00333
Ayed Alshammari , Umair Ali , Abdulbaset Mohammed Kabli , Majed H. Wakid , Muhammad Saqib , Shujaat Hussain , Warda Qamar , Mughees Aizaz Alvi

Monieziasis is a parasite-borne production-limiting disease of livestock. Moniezia expansa is the most important species having cosmopolitan distribution. Despite of numerous prevalence reports, very little information is available about the evolutionary biology and population genetics of M. expansa. To close this research gap, this study was undertaken to recognize and inspect the genetic variation of M. expansa populations around the world using the cox1 and nad1 genes and deduce phylogenetic relationships with M. expansa populations. The cox1 and nad1 gene sequences were downloaded from the NCBI GenBank database. Followed by sequence alignment, median-joining networks were constructed using PopArt software. Diversity and neutrality indices were computed through DnaSp software while MEGA software was used to draw the maximum-likelihood phylogenetic tree. Thirty-two cox1 sequences, from five different countries, and 9 nad1 sequences from three different countries, were among the sequences used in this study. The cox1 and nad1 gene sequences had mutations in 97 and 36 different places, respectively. Twenty and 7 unique haplotypes were discovered for the cox1 and nad1 gene sequences, respectively. Comparable haplotype diversities were observed for both the genes under study (cox1 = 0.950; nad1 = 0.944). Negative Tajima's D and Fu Fs were found for the cox1 gene while these indices were positive for the nad1 gene. Phylogenetic analysis also showed the existence of unique haplotypes for both the cox1 and nad1 genes. The results of this study indicate that there is the existence of a huge genetic diversity in M. expansa isolates. For future studies, it is recommended that longer gene sequences should be used to describe genetic variation among M. expansa isolates as the length of the gene under study affects the genetic variation. Moreover, additional mitochondrial markers should also be investigated because the assertive strength of a group of gene targets is superior to defining genetic diversity.

莫尼茨绦虫病是一种寄生虫传播的限制牲畜生产的疾病。扩张莫尼茨绦虫(Moniezia expansa)是最重要的一种,分布于世界各地。尽管有大量的流行报告,但有关扩张莫尼茨绦虫的进化生物学和种群遗传学的信息却很少。为了填补这一研究空白,本研究利用 cox1 和 nad1 基因识别和检测世界各地扩张莫尼茨绦虫种群的遗传变异,并推断扩张莫尼茨绦虫种群的系统发育关系。cox1 和 nad1 基因序列从 NCBI GenBank 数据库下载。序列比对后,使用 PopArt 软件构建了中位连接网络。通过 DnaSp 软件计算多样性和中性指数,并使用 MEGA 软件绘制最大似然系统发生树。本研究使用了来自五个不同国家的 32 条 cox1 序列和来自三个不同国家的 9 条 nad1 序列。cox1 和 nad1 基因序列分别在 97 个和 36 个不同位置发生了突变。在 cox1 和 nad1 基因序列中分别发现了 20 个和 7 个独特的单倍型。在所研究的两个基因中都观察到了相似的单倍型多样性(cox1 = 0.950;nad1 = 0.944)。在 cox1 基因中,Tajima's D 和 Fu Fs 均为负值,而在 nad1 基因中,这些指数均为正值。系统发育分析还显示,cox1 和 nad1 基因都存在独特的单倍型。这项研究的结果表明,扩张莫氏杆菌分离物中存在着巨大的遗传多样性。在今后的研究中,由于所研究基因的长度会影响遗传变异,因此建议使用较长的基因序列来描述扩张莫氏杆菌分离株之间的遗传变异。此外,还应该研究更多的线粒体标记,因为一组基因靶标的断言强度优于定义遗传多样性。
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引用次数: 0
Dog screening as a novel complementary guinea worm disease control tool to mitigate persistence in Chad: A modeling study 狗筛查作为一种新的补充麦地那龙线虫病控制工具,以减轻乍得的持久性:一项建模研究
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-11-01 DOI: 10.1016/j.parepi.2023.e00328
Mlyashimbi Helikumi , Steady Mushayabasa

A free-roaming dog population remains one of the major public health problems in many developing countries. In this study, we investigated the potential impact of owned roaming and stray dogs on the persistence and possible eradication of Guinea worm disease (GWD) in Chad. We developed and analysed a multi-host of Guinea worm; and considered dogs as the definitive hosts, and fish as the intermediate hosts. Currently, GWD cases in the human population are low; hence, we ignored the human population in this study. We derived the reproduction number and explored how it depends on different model parameters that define it. We calibrated the proposed model with data from literature and validated it with recently reported GWD monthly data for dog infection in Chad from 2019 to 2022. Results show that detection and tethering of infectious owned free-roaming dogs combined with culling of stray dogs are effective disease management strategies. Hence, attainment of certain threshold levels for these interventions could lead to disease eradication. Overall, the study revealed how different factors could be applied to effectively manage GWD transmission in the dog population. Findings from this study could be used to support decision-making in GWD control strategies.

Mathematics Subject Classification (2010): 92B05, 93A30, 93C15.

在许多发展中国家,自由流浪的狗群仍然是主要的公共卫生问题之一。在这项研究中,我们调查了拥有的流浪狗和流浪狗对乍得麦地那龙线虫病(GWD)持续存在和可能根除的潜在影响。我们开发并分析了麦地那龙线虫的多宿主;认为狗是最终宿主,鱼是中间宿主。目前,人口中的GWD病例很低;因此,我们在本研究中忽略了人口。我们推导了再现数,并探索了它如何依赖于定义它的不同模型参数。我们用文献数据校准了提出的模型,并用最近报道的乍得2019年至2022年狗感染的GWD月度数据对其进行了验证。结果表明,检测并拴住具有传染性的自养流浪狗,结合扑杀流浪狗是有效的疾病管理策略。因此,达到这些干预措施的某些阈值水平可能导致疾病根除。总的来说,该研究揭示了如何应用不同的因素来有效地控制犬群中的GWD传播。本研究结果可用于支持GWD控制策略的决策。数学学科分类(2010):92B05, 93A30, 93C15。
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引用次数: 0
Prevalence and risk factors of geohelminths in primary schools children aged 5 to 15 years in the city of Moundou, southwestern Chad 乍得西南部蒙杜市5至15岁小学生地蚯蚓患病率及危险因素
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-11-01 DOI: 10.1016/j.parepi.2023.e00330
Noumedem Anangmo Christelle Nadia , Yamssi Cedric , Adam Makine Ibrahim , Simeni Njonnou Sylvain Raoul , Gamago Nkadeu Guy-Armand , Tako Djimefo Alex Kevin , Kamga Fouamno Henri Lucien

Geohelminthiases are endemic in Chad and constitute a serious public health problem. This study aimed at determing the prevalence and risk factors of intestinal geohelminthiasis in children aged 5–15 years in the city of Moundou, Chad. This was a cross-sectional and descriptive study carried out in the city of Moundou. A total of 333 pupils participated in this study and it included children aged from 5 to 15 years attending three public primary schools in Moundou. A questionnaire was administered to each student after obtaining Informed Consent from either parent. Stool samples were collected in a sterile container and, the formalin-ethyl ether concentration technique was used to identify parasite. Parasitic load was assessed using the Mc Master cell method. The collected data were analyzed using Excel; Word 2016 and SPSS 20 software. An overall prevalence of 16.52% was obtained, 9.3% for Trichuris trichiura, 6.9% for Ascaris lumbricoides, and 1.2% for Hookworms. Male participants were more infected (67.24%) than females (32.76%). The age group]9–13] was the most infected (53.44%), followed by the age group [5–9](44.83%) and finally the age group]13–15] (1.73%). The Ouhoud school was the most infected (55.17%) followed by the Adoum Dallah school (39.66%) and finally the Centre school (5.17%). However, no statistically significant difference between gender and geohelminthiasis infection was recorded (p > 0.05). Regarding risk factors, statistical analysis showed that age group]9–13] (OR = 1.997 at 95% CI at [1.085–3.677]), Central Public School (OR = 1.55 at 95% CI at [0.63–2.46]), tap water (OR = 29 at 95% CI at [20.89–38.70]), not maintaining latrines (OR = 2.37 at 95% CI at [0.62–3.78]), and maintenance of latrines by pupils (OR = 1.5 at 95% CI at [0.63–2.46]) were risk factors. This study shows a high prevalence of geohelmenthiasis among children of three primary schools in Moundou, Chad. Although males were more infected than female there was no significant difference between gender and geohelminth infections (p = 0.114). was no gender difference. Identified risk factors of geohelmenthiasis infections among the study population were: age between 9 and 13 years, school water consumption, the use of unmaintained latrines and latrines maintained by students. Surveillance of geohelminthiases and hygiene should be intensified to reduce the pathological risk related to these parasites in Chad.

地蠕虫病在乍得流行,构成严重的公共卫生问题。本研究旨在确定乍得蒙杜市5-15岁儿童肠道地虫病的患病率和危险因素。这是一项在蒙杜市进行的横断面描述性研究。共有333名学生参加了这项研究,其中包括蒙杜三所公立小学的5至15岁儿童。在获得父母双方的知情同意后,对每位学生进行问卷调查。粪便标本采集于无菌容器中,采用福尔马林-乙醚浓度法进行寄生虫鉴定。采用mcmaster细胞法评估寄生负荷。收集的数据使用Excel进行分析;Word 2016和SPSS 20软件。总流行率为16.52%,其中毛滴虫9.3%,类蛔虫6.9%,钩虫1.2%。男性感染者(67.24%)高于女性感染者(32.76%)。以[9-13]年龄组感染率最高(53.44%),其次为[5-9]年龄组(44.83%),最后为[13-15]年龄组(1.73%)。Ouhoud学校感染率最高(55.17%),其次是Adoum Dallah学校(39.66%),最后是Centre学校(5.17%)。然而,地虫病感染的性别差异无统计学意义(p >0.05)。危险因素方面,统计分析显示[9-13岁]年龄组(OR = 1.997, 95% CI为[1.085-3.677])、中央公立学校(OR = 1.55, 95% CI为[0.63-2.46])、自来水(OR = 29, 95% CI为[20.89-38.70])、不维护厕所(OR = 2.37, 95% CI为[0.62-3.78])、小学生维护厕所(OR = 1.5, 95% CI为[0.63-2.46])是危险因素。这项研究表明,在乍得蒙杜的三所小学的儿童中,地helmenthasis的患病率很高。虽然男性感染率高于女性,但性别和地虫病感染率无显著差异(p = 0.114)。没有性别差异。在研究人群中,确定的地helmenthiasis感染的危险因素是:年龄在9至13岁之间,学校用水,使用无维护的厕所和由学生维护的厕所。应加强对地线虫病和卫生的监测,以减少乍得境内与这些寄生虫有关的病理风险。
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引用次数: 0
Agricultural practices and intestinal parasites: A study of socio-environmental risk factors associated with leafy vegetable production in La Plata horticultural area, Argentina 农业实践和肠道寄生虫:阿根廷拉普拉塔园艺区叶菜生产相关社会环境风险因素研究
IF 3.2 Q3 INFECTIOUS DISEASES Pub Date : 2023-11-01 DOI: 10.1016/j.parepi.2023.e00327
Andrea Celina Falcone , María Lorena Zonta , Juan Manuel Unzaga , Graciela Teresa Navone

Foodborne diseases now represent one of the most important public health problems. The objectives were to analyze the leafy vegetables and crop soil to detect parasitic species and evaluate the factors that increase the risk of parasitic contamination in the productive units in La Plata horticultural area. The study included 261 leafy vegetable and 87 crop soil samples that were processed using washing, sedimentation, and flotation techniques. Socio-environmental characteristics and agricultural practices were surveyed, and a generalized linear model was used to assess the change in parasitic prevalence with different predictor variable. The 58.6% of leafy vegetable and 31.0% of crop soil samples contained parasitic species, the most prevalent being Blastocystis sp. and oocysts of Cryptosporidium spp. Risk factors were the limited access to health, dirt roads, children and dogs circulating in crops, field cultivation, furrow irrigation and lettuce cultivation. The high prevalence of intestinal parasites in the vegetable crops was mainly associated with the conditions of structural precariousness in the production units. These results elaborated with the participation of the population, provide valuable knowledge for the planning of epidemiological programs that include environmental health as a fundamental nexus in health campaigns.

食源性疾病现在是最重要的公共卫生问题之一。目的是对拉普拉塔园艺区叶菜和作物土壤进行分析,以检测寄生物种,并评估增加生产单位寄生污染风险的因素。该研究包括261种叶菜和87种农作物的土壤样本,这些样本采用了洗涤、沉淀和浮选技术进行处理。通过调查社会环境特征和农业实践,采用广义线性模型评估不同预测变量下寄生虫流行率的变化。有58.6%的叶菜和31.0%的作物土壤样品含有寄生虫,其中以囊虫和隐孢子虫卵囊居多,危险因素为卫生条件差、土路、作物中流行的儿童和狗、田间种植、沟灌和生菜种植。蔬菜作物肠道寄生虫的高流行率主要与生产单位的结构不稳定有关。这些结果在民众的参与下详细阐述,为规划流行病学方案提供了宝贵的知识,其中包括将环境卫生作为卫生运动的基本联系。
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引用次数: 0
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Parasite Epidemiology and Control
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