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Building a synthetic theory of linguistic evolution? Comment on “Language follows a distinct mode of extra-genomic evolution” 建立一个语言进化的综合理论?评论“语言遵循一种独特的基因组外进化模式”。
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-30 DOI: 10.1016/j.plrev.2024.11.020
Paul Verdu
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引用次数: 0
GLMY homology theory meets idopNetwork: Dissecting soil microbiota resilience under forest thinning and climate change GLMY同源理论与idopNetwork:森林间伐和气候变化下土壤微生物群恢复力剖析
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-28 DOI: 10.1016/j.plrev.2024.11.016
Yuehua Cui
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引用次数: 0
From Parrondo's paradox to collective intelligence 从帕隆多悖论到集体智慧
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-26 DOI: 10.1016/j.plrev.2024.11.013
M. Dolfin , J. Liao , N. Bellomo
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引用次数: 0
Language: A special cognitive gadget 语言:一种特殊的认知工具。
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-22 DOI: 10.1016/j.plrev.2024.11.015
Cedric Boeckx
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引用次数: 0
The genotype concept and language evolution 基因型概念与语言进化
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-22 DOI: 10.1016/j.plrev.2024.11.014
Lindell Bromham
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引用次数: 0
Connecting brain and mind through temporo-spatial dynamics: Towards a theory of common currency 通过时空动态连接大脑和思想:走向共同货币理论
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-21 DOI: 10.1016/j.plrev.2024.11.012
Georg Northoff , Andrea Buccellato , Federico Zilio
Despite major progress in our understanding of the brain, the connection of neural and mental features, that is, brain and mind, remains yet elusive. In our 2020 target paper (“Is temporospatial dynamics the ‘common currency’ of brain and mind? Spatiotemporal Neuroscience”) we proposed the “Common currency hypothesis”: temporo-spatial dynamics are shared by neural and mental features, providing their connection. The current paper aims to further support and extend the original description of such common currency into a first outline of a “Common currency theory” (CCT) of neuro-mental relationship. First, we extend the range of examples to thoughts, meditation, depression and attention all lending support that temporal characteristics, (i.e. dynamics) are shared by both neural and mental features. Second, we now also show empirical examples of how spatial characteristics, i.e., topography, are shared by neural and mental features; this is illustrated by topographic reorganization of both neural and mental states in depression and meditation. Third, considering the neuro-mental connection in theoretical terms, we specify their relationship by distinct forms of temporospatial correspondences, ranging on a continuum from simple to complex. In conclusion, we extend our initial hypothesis about the key role of temporo-spatial dynamics in neuro-mental relationship into a first outline of an integrated mind-brain theory, the “Common currency theory” (CCT).
尽管我们对大脑的理解取得了重大进展,但神经和心理特征之间的联系,即大脑和精神,仍然难以捉摸。在我们2020年的目标论文(《时空动力学是大脑和思维的‘通用货币’吗?》)我们提出了“共同货币假说”:时空动力学是由神经和心理特征共享的,提供了它们之间的联系。本文旨在进一步支持和扩展这种共同货币的原始描述,成为神经-心理关系的“共同货币理论”(CCT)的第一个大纲。首先,我们将例子的范围扩展到思想、冥想、抑郁和注意力,所有这些都支持了神经和心理特征共享的时间特征(即动态)。其次,我们现在还展示了空间特征(即地形)如何与神经和心理特征共享的经验例子;这可以通过抑郁和冥想时神经和精神状态的地形重组来说明。第三,从理论上考虑神经-心理联系,我们通过不同形式的时空对应来指定它们的关系,范围从简单到复杂。综上所述,我们将关于时空动力学在神经-心理关系中的关键作用的最初假设扩展为一个综合心智-大脑理论的第一个轮廓,即“共同货币理论”(CCT)。
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引用次数: 0
Game theory and delays in thermostatted models 恒温模型中的博弈论和延迟:对 Carlo Bianca 所著 "复杂活性物质生命系统恒温动力学理论模型的十年 "的评论。
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-19 DOI: 10.1016/j.plrev.2024.11.010
Luca Guerrini
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引用次数: 0
Physics of collective transport and traffic phenomena in biology: Progress in 20 years 生物学中的集体运输和交通现象物理学:20 年来的进展
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-19 DOI: 10.1016/j.plrev.2024.11.008
Debashish Chowdhury , Andreas Schadschneider , Katsuhiro Nishinari
Enormous progress has been made in the last 20 years since the publication of our review [1] in this journal on transport and traffic phenomena in biology. In this brief article we present a glimpse of the major advances during this period. First, we present similarities and differences between collective intracellular transport of a single micron-size cargo by multiple molecular motors and that of a cargo particle by a team of ants on the basis of the common principle of load-sharing. Second, we sketch several models all of which are biologically motivated extensions of the Asymmetric Simple Exclusion Process (ASEP); some of these models represent the traffic of molecular machines, like RNA polymerase (RNAP) and ribosome, that catalyze template-directed polymerization of RNA and proteins, respectively, whereas few other models capture the key features of the traffic of ants on trails. More specifically, using the ASEP-based models we demonstrate the effects of traffic of RNAPs and ribosomes on random and ‘programmed’ errors in gene expression as well as on some other subcellular processes. We recall a puzzling empirical result on the single-lane traffic of predatory ants Leptogenys processionalis as well as recent attempts to account for this puzzle. We also mention some surprising effects of lane-changing rules observed in a ASEP-based model for 3-lane traffic of army ants. Finally, we explain the conceptual similarities between the pheromone-mediated indirect communication, called stigmergy, between ants on a trail and the floor-field-mediated interaction between humans in a pedestrian traffic. For the floor-field model of human pedestrian traffic we present a major theoretical result that is relevant from the perspective of all types of traffic phenomena.
自我们在本刊上发表关于生物学中的运输和交通现象的综述[1]以来,过去 20 年取得了巨大进步。在这篇简短的文章中,我们将介绍这一时期的主要进展。首先,我们介绍了由多个分子马达对单个微米大小的货物进行的细胞内集体运输与由一群蚂蚁根据共同的负载分担原则对一个货物颗粒进行的集体运输之间的异同。其次,我们勾画了几个模型,它们都是非对称简单排除过程(ASEP)的生物学扩展;其中一些模型代表了分子机器的运输,如 RNA 聚合酶(RNAP)和核糖体,它们分别催化 RNA 和蛋白质的模板定向聚合,而很少有其他模型能捕捉到蚂蚁在小径上运输的关键特征。更具体地说,利用基于 ASEP 的模型,我们证明了 RNAP 和核糖体的流动对基因表达中的随机和 "编程 "错误以及其他一些亚细胞过程的影响。我们回顾了捕食性蚂蚁 Leptogenys processionalis 单道运输的一个令人费解的经验结果,以及最近为解释这一谜题所做的尝试。我们还提到了在基于 ASEP 的军蚁三车道交通模型中观察到的变道规则的一些令人惊讶的效果。最后,我们解释了小径上蚂蚁之间以信息素为媒介的间接交流(称为stigmergy)与行人交通中人类之间以地场为媒介的互动在概念上的相似之处。对于人类行人交通的地面场模型,我们提出了一个重要的理论成果,它与所有类型的交通现象都有关联。
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引用次数: 0
Reaction-diffusion waves in biology: new trends, recent developments 生物学中的反应-扩散波:新趋势、最新发展。
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-19 DOI: 10.1016/j.plrev.2024.11.007
V. Volpert , S. Petrovskii
Reaction-diffusion systems are widely used in the description of propagation phenomena in biological systems, where chemical and biological processes combine to produce spatial and temporal patterns. This paper explores the recent trends and developments in the study of reaction-diffusion waves, highlighting their relevance to diverse biological contexts such as population dynamics, ecology or biomedical applications. Progress in mathematical techniques and computational methods advances our ability to model these systems, providing deeper insights into wave propagation, stability, and bifurcations. We also discuss novel models and their implications for understanding processes such as biological invasions or disease proliferation. Overall, the integration of modern theoretical frameworks with experimental data continues to push the boundaries of this interdisciplinary field, revealing new applications and mechanisms underlying biological wave dynamics.
反应扩散系统被广泛应用于描述生物系统中的传播现象,其中化学和生物过程结合产生空间和时间模式。本文探讨了反应扩散波研究的最新趋势和发展,强调了反应扩散波与种群动力学、生态学或生物医学应用等各种生物环境的相关性。数学技术和计算方法的进步提高了我们为这些系统建模的能力,使我们对波的传播、稳定性和分岔有了更深入的了解。我们还讨论了新型模型及其对理解生物入侵或疾病扩散等过程的影响。总之,现代理论框架与实验数据的整合不断推动这一跨学科领域的发展,揭示了生物波动力学的新应用和内在机制。
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引用次数: 0
COVID-19 epidemic: From data to mathematical models COVID-19 流行病:从数据到数学模型对 Jacques Demongeot 和 Pierre Magal 撰写的 "COVID-19 数据驱动数学建模方法:Jacques Demongeot 和 Pierre Magal 的评论。
IF 13.7 1区 生物学 Q1 BIOLOGY Pub Date : 2024-11-19 DOI: 10.1016/j.plrev.2024.11.011
François Hamel
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引用次数: 0
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Physics of Life Reviews
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