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Evaluation of charge summing correction in CdTe-based photon-counting detectors for breast CT: performance metrics and image quality.
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-01-25 DOI: 10.1117/1.JMI.12.1.013501
Sriharsha Marupudi, Joseph A Manus, Muhammad U Ghani, Stephen J Glick, Bahaa Ghammraoui

Purpose: We evaluate the impact of charge summing correction on a cadmium telluride (CdTe)-based photon-counting detector in breast computed tomography (CT).

Approach: We employ a custom-built laboratory benchtop system using the X-THOR FX30 0.75-mm CdTe detector (Varex Imaging, Salt Lake City, Utah, United States) with a pixel pitch of 0.1 mm, operated in both standard mode [single pixel (SP)] and charge summing correction mode [anticoincidence (AC)]. A tungsten anode source operated at 55 kVp with 2-mm aluminum external filtration and tube currents of 25, 100, and 200 mA with corresponding exposure times of 20, 5, and 2.5 ms were employed to study the effects of X-ray fluence and pulse pileup. Performance comparisons between AC and SP modes are performed in both projection and image reconstructed spaces. In the projection space, performance metrics include count rate, energy resolution, uniformity, modulation transfer function (MTF), and noise power spectrum (NPS). In the image space, performance metrics consist of contrast-to-noise ratio (CNR), uniformity, NPS, and iodine quantification accuracy. For both acquisition modes, signal-to-thickness calibration, for gain and beam hardening corrections, is used before image reconstruction. Images are reconstructed via TIGRE CT software using the standard Feldkamp, Davis, and Kress (FDK) filtered back projection algorithm with a Hann filter and reconstructed with a voxel size of 0.081 mm. Material decomposition is performed using a standard image-based method.

Results: In the detector space, the application of hardware-based charge summing correction enhances spectral resolution and improves the spatial resolution of MTF at lower energy thresholds but introduces anomalous edge enhancement effects and artifacts in the MTF at high fluence. A negative noise correlation was observed in AC mode-acquired images. As expected, the AC acquisition mode results in a decreased detector count rate. In the image space, NPS results displayed elevated noise in low-energy AC images. However, at high energy, noise was comparable between both modes. Greater uniformity was observed in SP mode-acquired images. The largest disparity was observed in the iodine quantification test, where the AC mode demonstrates a much stronger linear relationship between estimated and true iodine concentrations than the SP mode.

Conclusion: The results are specific to the studied system, reconstruction parameters, and irradiation conditions limited to 200 mA and 0.5 mAs. The AC mode generally provides better energy and MTF resolution at low energy thresholds but with increased noise and reduced uniformity. In image space, charge summing correction improved iodine quantification and CNR at high energy thresholds.

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引用次数: 0
Comparing synthetic mammograms based on wide-angle digital breast tomosynthesis with digital mammograms. 基于广角数字乳腺断层合成的合成乳房x线照片与数字乳房x线照片的比较。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-01-20 DOI: 10.1117/1.JMI.12.S1.S13011
Magnus Dustler, Gustav Hellgren, Pontus Timberg

Purpose: We aim to investigate the characteristics and evaluate the performance of synthetic mammograms (SMs) based on wide-angle digital breast tomosynthesis (DBT) compared with digital mammography (DM).

Approach: Fifty cases with both synthetic and digital mammograms were selected from the Malmö Breast Tomosynthesis Screening Trial. They were categorized into five groups consisting of normal cases and recalled cases with false-positive and true-positive findings from DM and DBT only. The DBT system used was a wide-angle (WA) system from Siemens, and the SM images were reconstructed from the DBT images. Visual grading, detection, and recall were evaluated by experienced breast radiologists in both SM and DM images.

Results: Some image quality criteria of the SM images were rated as qualitatively inferior to DM images. However, reader-averaged diagnostic accuracy (0.57 versus 0.55), sensitivity (0.46 versus 0.50), and specificity (0.64 versus 0.58) were not significantly different between SM and DM, respectively.

Conclusions: Synthetic mammography plays a promising role to complement or even replace DM. The study could not find any indications of substantial differences in the sensitivity or specificity of SM for WA DBT systems compared with DM. However, certain image quality criteria of SM fall slightly short compared with DM images. Next-generation DBT systems could address such limitations through improved reconstruction algorithms and system design, and their performance should be the focus of future research studies.

目的:探讨基于广角数字乳腺断层合成(DBT)的合成乳房x线照片(SMs)的特点,并与数字乳房x线摄影(DM)进行比较。方法:从Malmö乳腺断层合成筛查试验中选择50例合成和数字乳房x线照片。他们被分为五组,包括正常病例和召回病例,假阳性和真阳性结果仅来自DM和DBT。使用的DBT系统是西门子公司的广角(WA)系统,从DBT图像重建SM图像。由经验丰富的乳腺放射科医生对SM和DM图像的视觉分级、检测和召回进行评估。结果:SM图像的一些质量指标被评为质量低于DM图像。然而,读者平均诊断准确率(0.57 vs 0.55)、敏感性(0.46 vs 0.50)和特异性(0.64 vs 0.58)在SM和DM之间分别没有显著差异。结论:综合乳房x线摄影在补充甚至替代DM方面具有很好的作用,本研究未发现任何迹象表明SM在WA DBT系统中的敏感性或特异性与DM相比有实质性差异,但SM的某些图像质量标准与DM图像相比略有不足。下一代DBT系统可以通过改进重建算法和系统设计来解决这些限制,其性能应该是未来研究的重点。
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引用次数: 0
Vision transformer distillation for enhanced gastrointestinal abnormality recognition in wireless capsule endoscopy images.
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-02-05 DOI: 10.1117/1.JMI.12.1.014505
Yassine Oukdach, Anass Garbaz, Zakaria Kerkaou, Mohamed El Ansari, Lahcen Koutti, Nikolaos Papachrysos, Ahmed Fouad El Ouafdi, Thomas de Lange, Cosimo Distante

Purpose: Wireless capsule endoscopy (WCE) is a non-invasive technology used for diagnosing gastrointestinal abnormalities. A single examination generates 55,000 images, making manual review both time-consuming and costly for doctors. Therefore, the development of computer vision-assisted systems is highly desirable to aid in the diagnostic process.

Approach: We presents a deep learning approach leveraging knowledge distillation (KD) from a convolutional neural network (CNN) teacher model to a vision transformer (ViT) student model for gastrointestinal abnormality recognition. The CNN teacher model utilizes attention mechanisms and depth-wise separable convolutions to extract features from WCE images, supervising the ViT in learning these representations.

Results: The proposed method achieves accuracy of 97% and 96% on the Kvasir and KID datasets, respectively, demonstrating its effectiveness in distinguishing normal from abnormal regions and bleeding from non-bleeding cases. The proposed approach offers computational efficiency and generalization to unseen datasets, outperforming several state-of-the-art methods.

Conclusions: We proposed a deep learning approach utilizing CNNs and a ViT with KD to effectively classify gastrointestinal diseases in WCE images. It demonstrates promising performance on public datasets, distinguishing normal from abnormal regions and bleeding from non-bleeding cases while offering optimal computational efficiency compared with existing methods, making it suitable for GI disease applications.

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引用次数: 0
Lung nodule localization and size estimation on chest tomosynthesis. 胸部断层扫描的肺结节定位和大小估计。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2024-10-28 DOI: 10.1117/1.JMI.12.S1.S13007
Micael Oliveira Diniz, Mohammad Khalil, Erika Fagman, Jenny Vikgren, Faiz Haj, Angelica Svalkvist, Magnus Båth, Åse Allansdotter Johnsson

Purpose: We aim to investigate the localization, visibility, and measurement of lung nodules in digital chest tomosynthesis (DTS).

Approach: Computed tomography (CT), maximum intensity projections (CT-MIP) (transaxial versus coronal orientation), and computer-aided detection (CAD) were used as location reference, and inter- and intra-observer agreement regarding lung nodule size was assessed. Five radiologists analyzed DTS and CT images from 24 participants with lung nodules 100    mm 3 , focusing on lung nodule localization, visibility, and measurement on DTS. Visual grading was used to compare if coronal or transaxial CT-MIP better facilitated the localization of lung nodules in DTS.

Results: The majority of the lung nodules (79%) were rated as visible in DTS, although less clearly in comparison with CT. Coronal CT-MIP was the preferred orientation in the task of locating nodules on DTS. On DTS, area-based lung nodule size estimates resulted in significantly less measurement variability when compared with nodule size estimated based on mean diameter (mD) ( p < 0.05 ). Also, on DTS, area-based lung nodule size estimates were more accurate ( SEE = 38.7    mm 3 ) than lung nodule size estimates based on mean diameter ( SEE = 42.7    mm 3 ).

Conclusions: Coronal CT-MIP images are superior to transaxial CT-MIP images in facilitating lung nodule localization in DTS. Most nodules 100    mm 3 found on CT can be visualized, correctly localized, and measured in DTS, and area-based measurement may be the key to more precise and less variable nodule measurements on DTS.

目的:我们旨在研究数字胸部断层扫描(DTS)中肺结节的定位、可见性和测量方法:方法:使用计算机断层扫描(CT)、最大强度投影(CT-MIP)(横轴向与冠状向)和计算机辅助检测(CAD)作为定位参考,并评估观察者之间和观察者内部关于肺结节大小的一致性。五位放射科医生分析了 24 位肺部结节≥ 100 mm 3 的参试者的 DTS 和 CT 图像,重点是肺部结节的定位、可见度和 DTS 的测量。采用目视分级法比较冠状位或经轴位 CT-MIP 是否更有利于 DTS 中肺部结节的定位:大多数肺结节(79%)在 DTS 中被评为可见,但与 CT 相比,其清晰度较低。在 DTS 上定位结节时,冠状 CT-MIP 是首选方向。在 DTS 上,与根据平均直径 (mD) 估算的结节大小相比,根据面积估算的肺结节大小的测量变异性要小得多(P 0.05)。此外,在 DTS 上,基于面积的肺结节大小估计值(SEE = 38.7 mm 3)比基于平均直径的肺结节大小估计值(SEE = 42.7 mm 3)更准确:结论:冠状 CT-MIP 图像在促进 DTS 肺结节定位方面优于经轴 CT-MIP 图像。在 CT 上发现的≥ 100 mm 3 的大多数结节都能在 DTS 中被观察到、正确定位和测量,而基于面积的测量可能是在 DTS 中更精确、更少变化的结节测量的关键。
{"title":"Lung nodule localization and size estimation on chest tomosynthesis.","authors":"Micael Oliveira Diniz, Mohammad Khalil, Erika Fagman, Jenny Vikgren, Faiz Haj, Angelica Svalkvist, Magnus Båth, Åse Allansdotter Johnsson","doi":"10.1117/1.JMI.12.S1.S13007","DOIUrl":"https://doi.org/10.1117/1.JMI.12.S1.S13007","url":null,"abstract":"<p><strong>Purpose: </strong>We aim to investigate the localization, visibility, and measurement of lung nodules in digital chest tomosynthesis (DTS).</p><p><strong>Approach: </strong>Computed tomography (CT), maximum intensity projections (CT-MIP) (transaxial versus coronal orientation), and computer-aided detection (CAD) were used as location reference, and inter- and intra-observer agreement regarding lung nodule size was assessed. Five radiologists analyzed DTS and CT images from 24 participants with lung <math><mrow><mtext>nodules</mtext> <mo>≥</mo> <mn>100</mn> <mtext>  </mtext> <msup><mrow><mi>mm</mi></mrow> <mrow><mn>3</mn></mrow> </msup> </mrow> </math> , focusing on lung nodule localization, visibility, and measurement on DTS. Visual grading was used to compare if coronal or transaxial CT-MIP better facilitated the localization of lung nodules in DTS.</p><p><strong>Results: </strong>The majority of the lung nodules (79%) were rated as visible in DTS, although less clearly in comparison with CT. Coronal CT-MIP was the preferred orientation in the task of locating nodules on DTS. On DTS, area-based lung nodule size estimates resulted in significantly less measurement variability when compared with nodule size estimated based on mean diameter (mD) ( <math><mrow><mi>p</mi> <mo><</mo> <mn>0.05</mn></mrow> </math> ). Also, on DTS, area-based lung nodule size estimates were more accurate ( <math><mrow><mi>SEE</mi> <mo>=</mo> <mn>38.7</mn> <mtext>  </mtext> <msup><mi>mm</mi> <mn>3</mn></msup> </mrow> </math> ) than lung nodule size estimates based on mean diameter ( <math><mrow><mi>SEE</mi> <mo>=</mo> <mn>42.7</mn> <mtext>  </mtext> <msup><mi>mm</mi> <mn>3</mn></msup> </mrow> </math> ).</p><p><strong>Conclusions: </strong>Coronal CT-MIP images are superior to transaxial CT-MIP images in facilitating lung nodule localization in DTS. Most <math><mrow><mtext>nodules</mtext> <mo>≥</mo> <mn>100</mn> <mtext>  </mtext> <msup><mrow><mi>mm</mi></mrow> <mrow><mn>3</mn></mrow> </msup> </mrow> </math> found on CT can be visualized, correctly localized, and measured in DTS, and area-based measurement may be the key to more precise and less variable nodule measurements on DTS.</p>","PeriodicalId":47707,"journal":{"name":"Journal of Medical Imaging","volume":"12 Suppl 1","pages":"S13007"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11514701/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142548312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Breathing motion compensation in chest tomosynthesis: evaluation of the effect on image quality and presence of artifacts. 胸部断层扫描中的呼吸运动补偿:评估对图像质量和伪影的影响。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2024-09-14 DOI: 10.1117/1.JMI.12.S1.S13004
Maral Mirzai, Jenny Nilsson, Patrik Sund, Rauni Rossi Norrlund, Micael Oliveira Diniz, Bengt Gottfridsson, Ida Häggström, Åse A Johnsson, Magnus Båth, Angelica Svalkvist

Purpose: Chest tomosynthesis (CTS) has a relatively longer acquisition time compared with chest X-ray, which may increase the risk of motion artifacts in the reconstructed images. Motion artifacts induced by breathing motion adversely impact the image quality. This study aims to reduce these artifacts by excluding projection images identified with breathing motion prior to the reconstruction of section images and to assess if motion compensation improves overall image quality.

Approach: In this study, 2969 CTS examinations were analyzed to identify examinations where breathing motion has occurred using a method based on localizing the diaphragm border in each of the projection images. A trajectory over diaphragm positions was estimated from a second-order polynomial curve fit, and projection images where the diaphragm border deviated from the trajectory were removed before reconstruction. The image quality between motion-compensated and uncompensated examinations was evaluated using the image quality criteria for anatomical structures and image artifacts in a visual grading characteristic (VGC) study. The resulting rating data were statistically analyzed using the software VGC analyzer.

Results: A total of 58 examinations were included in this study with breathing motion occurring either at the beginning or end ( n = 17 ) or throughout the entire acquisition ( n = 41 ). In general, no significant difference in image quality or presence of motion artifacts was shown between the motion-compensated and uncompensated examinations. However, motion compensation significantly improved the image quality and reduced the motion artifacts in cases where motion occurred at the beginning or end. In examinations where motion occurred throughout the acquisition, motion compensation led to a significant increase in ripple artifacts and noise.

Conclusions: Compensation for respiratory motion in CTS by excluding projection images may improve the image quality if the motion occurs mainly at the beginning or end of the examination. However, the disadvantages of excluding projections may outweigh the benefits of motion compensation.

目的:胸部断层扫描(CTS)与胸部 X 光相比,采集时间相对较长,这可能会增加重建图像中出现运动伪影的风险。呼吸运动引起的运动伪影会对图像质量造成负面影响。本研究旨在通过在重建切面图像前排除有呼吸运动的投影图像来减少这些伪影,并评估运动补偿是否能改善整体图像质量:在这项研究中,对 2969 例 CTS 检查进行了分析,以便使用一种基于定位每张投影图像中横膈膜边界的方法来识别发生呼吸运动的检查。通过二阶多项式曲线拟合估算出横膈膜位置的轨迹,并在重建前去除横膈膜边界偏离轨迹的投影图像。在视觉分级特征(VGC)研究中,使用解剖结构和图像伪影的图像质量标准评估了运动补偿检查和未补偿检查之间的图像质量。结果:本研究共包括 58 次检查,呼吸运动发生在检查开始或结束时(17 次)或整个采集过程中(41 次)。一般来说,运动补偿和未补偿的检查在图像质量或运动伪影方面没有明显差异。但是,如果运动发生在采集开始或结束时,运动补偿会明显改善图像质量并减少运动伪影。在整个采集过程中都出现运动的检查中,运动补偿导致纹波伪影和噪声显著增加:结论:如果运动主要发生在检查开始或结束时,通过排除投影图像来补偿 CTS 中的呼吸运动可能会改善图像质量。然而,排除投影的弊端可能大于运动补偿的好处。
{"title":"Breathing motion compensation in chest tomosynthesis: evaluation of the effect on image quality and presence of artifacts.","authors":"Maral Mirzai, Jenny Nilsson, Patrik Sund, Rauni Rossi Norrlund, Micael Oliveira Diniz, Bengt Gottfridsson, Ida Häggström, Åse A Johnsson, Magnus Båth, Angelica Svalkvist","doi":"10.1117/1.JMI.12.S1.S13004","DOIUrl":"https://doi.org/10.1117/1.JMI.12.S1.S13004","url":null,"abstract":"<p><strong>Purpose: </strong>Chest tomosynthesis (CTS) has a relatively longer acquisition time compared with chest X-ray, which may increase the risk of motion artifacts in the reconstructed images. Motion artifacts induced by breathing motion adversely impact the image quality. This study aims to reduce these artifacts by excluding projection images identified with breathing motion prior to the reconstruction of section images and to assess if motion compensation improves overall image quality.</p><p><strong>Approach: </strong>In this study, 2969 CTS examinations were analyzed to identify examinations where breathing motion has occurred using a method based on localizing the diaphragm border in each of the projection images. A trajectory over diaphragm positions was estimated from a second-order polynomial curve fit, and projection images where the diaphragm border deviated from the trajectory were removed before reconstruction. The image quality between motion-compensated and uncompensated examinations was evaluated using the image quality criteria for anatomical structures and image artifacts in a visual grading characteristic (VGC) study. The resulting rating data were statistically analyzed using the software VGC analyzer.</p><p><strong>Results: </strong>A total of 58 examinations were included in this study with breathing motion occurring either at the beginning or end ( <math><mrow><mi>n</mi> <mo>=</mo> <mn>17</mn></mrow> </math> ) or throughout the entire acquisition ( <math><mrow><mi>n</mi> <mo>=</mo> <mn>41</mn></mrow> </math> ). In general, no significant difference in image quality or presence of motion artifacts was shown between the motion-compensated and uncompensated examinations. However, motion compensation significantly improved the image quality and reduced the motion artifacts in cases where motion occurred at the beginning or end. In examinations where motion occurred throughout the acquisition, motion compensation led to a significant increase in ripple artifacts and noise.</p><p><strong>Conclusions: </strong>Compensation for respiratory motion in CTS by excluding projection images may improve the image quality if the motion occurs mainly at the beginning or end of the examination. However, the disadvantages of excluding projections may outweigh the benefits of motion compensation.</p>","PeriodicalId":47707,"journal":{"name":"Journal of Medical Imaging","volume":"12 Suppl 1","pages":"S13004"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11399550/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142298677","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dye amount quantification of Papanicolaou-stained cytological images by multispectral unmixing: spectral analysis of cytoplasmic mucin. 通过多光谱非混合法对巴氏染色细胞学图像进行染料量定量:细胞质粘蛋白的光谱分析。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2024-12-28 DOI: 10.1117/1.JMI.12.1.017501
Saori Takeyama, Tomoaki Watanabe, Nanxin Gong, Masahiro Yamaguchi, Takumi Urata, Fumikazu Kimura, Keiko Ishii

Purpose: The color of Papanicolaou-stained specimens is a crucial feature in cytology diagnosis. However, the quantification of color using digital images is challenging due to the variations in the staining process and characteristics of imaging equipment. The dye amount estimation of stained specimens is helpful for quantitatively interpreting the color based on a physical model. It has been realized with color unmixing and applied to staining with three or fewer dyes. Nevertheless, the Papanicolaou stain comprises five dyes. Thus, we employ multispectral imaging with more channels for quantitative analysis of the Papanicolaou-stained cervical cytology samples.

Approach: We estimate the dye amount map from a 14-band multispectral observation capturing a Papanicolaou-stained specimen using the actual measured spectral characteristics of the single-stained samples. The estimated dye amount maps were employed for the quantitative interpretation of the color of cytoplasmic mucin of lobular endocervical glandular hyperplasia (LEGH) and normal endocervical (EC) cells in a uterine cervical lesion.

Results: We demonstrated the dye amount estimation performance of the proposed method using single-stain images and Papanicolaou-stain images. Moreover, the yellowish color in the LEGH cells is found to be interpreted with more orange G (OG) and less Eosin Y (EY) dye amounts. We also elucidated that LEGH and EC cells could be classified using linear classifiers from the dye amount.

Conclusions: Multispectral imaging enables the quantitative analysis of dye amount maps of Papanicolaou-stained cytology specimens. The effectiveness is demonstrated in interpreting and classifying the cytoplasmic mucin of EC and LEGH cells in cervical cytology.

目的:巴氏染色标本的颜色是细胞学诊断的重要特征。然而,由于染色过程的变化和成像设备的特点,使用数字图像的颜色定量是具有挑战性的。染色标本的染色量估计有助于基于物理模型定量解释颜色。它已经实现了颜色分离,并应用于三种或更少的染料染色。然而,Papanicolaou染色包括五种染料。因此,我们采用多通道多光谱成像对宫颈巴氏染色细胞学样本进行定量分析。方法:我们使用单染色样品的实际测量光谱特征,从14波段多光谱观测捕获papanicolou染色样品估计染料量图。估计的染色量图用于定量解释子宫颈病变小叶宫颈内腺增生(LEGH)和正常宫颈内(EC)细胞的细胞质粘蛋白的颜色。结果:我们使用单染色图像和papanicolou染色图像证明了所提出的方法的染料量估计性能。此外,LEGH细胞的淡黄色被发现与更多的橙色G (OG)和更少的伊红Y (EY)染料量解释。我们还阐明了LEGH和EC细胞可以用线性分类器从染色量进行分类。结论:多光谱成像能够定量分析巴氏染色细胞学标本的染料量图。在宫颈细胞学中EC和LEGH细胞的细胞质粘蛋白的解释和分类中证明了该方法的有效性。
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引用次数: 0
Weakly supervised pathological differentiation of primary central nervous system lymphoma and glioblastoma on multi-site whole slide images. 原发性中枢神经系统淋巴瘤和胶质母细胞瘤在多部位全片图像上的弱监督病理分化。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-01-11 DOI: 10.1117/1.JMI.12.1.017502
Liping Wang, Lin Chen, Kaixi Wei, Huiyu Zhou, Reyer Zwiggelaar, Weiwei Fu, Yingchao Liu

Purpose: Differentiating primary central nervous system lymphoma (PCNSL) and glioblastoma (GBM) is crucial because their prognosis and treatment differ substantially. Manual examination of their histological characteristics is considered the golden standard in clinical diagnosis. However, this process is tedious and time-consuming and might lead to misdiagnosis caused by morphological similarity between their histology and tumor heterogeneity. Existing research focuses on radiological differentiation, which mostly uses multi-parametric magnetic resonance imaging. By contrast, we investigate the pathological differentiation between the two types of tumors using whole slide images (WSIs) of postoperative formalin-fixed paraffin-embedded samples.

Approach: To learn the specific and intrinsic histological feature representations from the WSI patches, a self-supervised feature extractor is trained. Then, the patch representations are fused by feeding into a weakly supervised multiple-instance learning model for the WSI classification. We validate our approach on 134 PCNSL and 526 GBM cases collected from three hospitals. We also investigate the effect of feature extraction on the final prediction by comparing the performance of applying the feature extractors trained on the PCNSL/GBM slides from specific institutions, multi-site PCNSL/GBM slides, and large-scale histopathological images.

Results: Different feature extractors perform comparably with the overall area under the receiver operating characteristic curve value exceeding 85% for each dataset and close to 95% for the combined multi-site dataset. Using the institution-specific feature extractors generally obtains the best overall prediction with both of the PCNSL and GBM classification accuracies reaching 80% for each dataset.

Conclusions: The excellent classification performance suggests that our approach can be used as an assistant tool to reduce the pathologists' workload by providing an accurate and objective second diagnosis. Moreover, the discriminant regions indicated by the generated attention heatmap improve the model interpretability and provide additional diagnostic information.

目的:原发性中枢神经系统淋巴瘤(PCNSL)和胶质母细胞瘤(GBM)的预后和治疗有很大的不同,因此鉴别它们至关重要。手工检查其组织学特征被认为是临床诊断的黄金标准。然而,这一过程繁琐且耗时,且可能因其组织形态相似性和肿瘤异质性而导致误诊。现有的研究主要集中在放射学鉴别,多采用多参数磁共振成像。相比之下,我们使用术后福尔马林固定石蜡包埋样本的全切片图像(WSIs)来研究两种肿瘤的病理分化。方法:为了从WSI补丁中学习特定的和内在的组织学特征表示,训练了一个自监督特征提取器。然后,将patch表示融合到用于WSI分类的弱监督多实例学习模型中。我们对来自三家医院的134例PCNSL和526例GBM病例进行了验证。我们还通过比较在特定机构的PCNSL/GBM载玻片、多位点PCNSL/GBM载玻片和大规模组织病理图像上应用训练的特征提取器的性能,研究了特征提取对最终预测的影响。结果:不同的特征提取器表现比较好,每个数据集的接收者工作特征曲线值下的总体面积超过85%,组合的多站点数据集接近95%。使用机构特征提取器通常可以获得最佳的整体预测,每个数据集的PCNSL和GBM分类准确率均达到80%。结论:该方法具有良好的分类性能,可作为辅助工具,提供准确、客观的二次诊断,减少病理医师的工作量。此外,由生成的注意力热图指示的判别区域提高了模型的可解释性,并提供了额外的诊断信息。
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引用次数: 0
Breast cancer classification in point-of-care ultrasound imaging-the impact of training data. 护理点超声成像中的乳腺癌分类-训练数据的影响。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-01-17 DOI: 10.1117/1.JMI.12.1.014502
Jennie Karlsson, Ida Arvidsson, Freja Sahlin, Kalle Åström, Niels Christian Overgaard, Kristina Lång, Anders Heyden

Purpose: The survival rate of breast cancer for women in low- and middle-income countries is poor compared with that in high-income countries. Point-of-care ultrasound (POCUS) combined with deep learning could potentially be a suitable solution enabling early detection of breast cancer. We aim to improve a classification network dedicated to classifying POCUS images by comparing different techniques for increasing the amount of training data.

Approach: Two data sets consisting of breast tissue images were collected, one captured with POCUS and another with standard ultrasound (US). The data sets were expanded by using different techniques, including augmentation, histogram matching, histogram equalization, and cycle-consistent adversarial networks (CycleGANs). A classification network was trained on different combinations of the original and expanded data sets. Different types of augmentation were investigated and two different CycleGAN approaches were implemented.

Results: Almost all methods for expanding the data sets significantly improved the classification results compared with solely using POCUS images during the training of the classification network. When training the classification network on POCUS and CycleGAN-generated POCUS images, it was possible to achieve an area under the receiver operating characteristic curve of 95.3% (95% confidence interval 93.4% to 97.0%).

Conclusions: Applying augmentation during training showed to be important and increased the performance of the classification network. Adding more data also increased the performance, but using standard US images or CycleGAN-generated POCUS images gave similar results.

目的:与高收入国家相比,低收入和中等收入国家妇女的乳腺癌存活率较低。即时超声(POCUS)结合深度学习可能是早期发现乳腺癌的合适解决方案。我们的目标是通过比较不同的技术来增加训练数据量,从而改进一个专门用于POCUS图像分类的分类网络。方法:收集两组由乳腺组织图像组成的数据集,一组由POCUS捕获,另一组由标准超声(US)捕获。数据集通过使用不同的技术进行扩展,包括增强、直方图匹配、直方图均衡化和周期一致对抗网络(cyclegan)。在原始数据集和扩展数据集的不同组合上训练分类网络。研究了不同类型的增强,并实施了两种不同的CycleGAN方法。结果:在分类网络的训练过程中,几乎所有扩展数据集的方法都比单独使用POCUS图像显著提高了分类结果。在POCUS和cyclegan生成的POCUS图像上训练分类网络时,可以实现95.3%的接收者工作特征曲线下的面积(95%置信区间为93.4% ~ 97.0%)。结论:在训练过程中应用增强是很重要的,可以提高分类网络的性能。添加更多的数据也会提高性能,但使用标准的US图像或cyclegan生成的POCUS图像也会得到类似的结果。
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引用次数: 0
Scatter correction for contrast-enhanced digital breast tomosynthesis with a dual-layer detector. 用双层检测器进行对比度增强数字乳房断层合成的散射校正。
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2024-12-04 DOI: 10.1117/1.JMI.12.S1.S13008
Xiangyi Wu, Xiaoyu Duan, Hailiang Huang, Wei Zhao

Purpose: Contrast-enhanced digital breast tomosynthesis (CEDBT) highlights breast tumors with neo-angiogenesis. A recently proposed CEDBT system with a dual-layer (DL) flat-panel detector enables simultaneous acquisition of high-energy (HE) and low-energy (LE) projection images with a single exposure, which reduces acquisition time and eliminates motion artifacts. However, x-ray scatter degrades image quality and lesion detectability. We propose a practical method for accurate and robust scatter correction (SC) for DL-CEDBT.

Approach: The proposed hybrid SC method combines the advantages of a two-kernel iterative convolution method and an empirical interpolation strategy, which accounts for the reduced scatter from the peripheral breast region due to thickness roll-off and the scatter contribution from the region outside the breast. Scatter point spread functions were generated using Monte Carlo simulations with different breast glandular fractions, compressed thicknesses, and projection angles. Projection images and ground truth scatter maps of anthropomorphic digital breast phantoms were simulated to evaluate the performance of the proposed SC method and three other kernel- and interpolation-based methods. The mean absolute relative error (MARE) between scatter estimates and ground truth was used as the metric for SC accuracy.

Results: DL-CEDBT shows scatter characteristics different from dual-shot, primarily due to the two energy peaks of the incident spectrum and the structure of the DL detector. Compared with the other methods investigated, the proposed hybrid SC method showed superior accuracy and robustness, with MARE of 3.1 % for all LE and HE projection images of different phantoms in both cranial-caudal and mediolateral-oblique views. After SC, cupping artifacts in the dual-energy image were removed, and the signal difference-to-noise ratio was improved by 82.0% for 8 mm iodine objects.

Conclusions: A practical SC method was developed, which provided accurate and robust scatter estimates to improve image quality and lesion detectability for DL-CEDBT.

目的:对比增强数字乳腺断层合成(CEDBT)显示新血管生成的乳腺肿瘤。最近提出的带有双层(DL)平板探测器的CEDBT系统可以通过一次曝光同时采集高能(HE)和低能(LE)投影图像,从而减少了采集时间并消除了运动伪影。然而,x射线散射降低了图像质量和病变的可检测性。提出了一种实用的DL-CEDBT散射校正方法。方法:本文提出的混合SC方法结合了双核迭代卷积方法和经验插值策略的优点,兼顾了乳房外围区域由于厚度滚降而产生的散射减少和乳房外区域的散射贡献。利用蒙特卡罗模拟生成了不同乳腺分数、压缩厚度和投影角度的散点扩散函数。模拟了拟人化数字乳房幻影的投影图像和地面真值散点图,以评估所提出的SC方法和其他三种基于核和插值的方法的性能。散射估计与地面真实值之间的平均绝对相对误差(MARE)作为SC精度的度量。结果:DL- cedbt表现出不同于双射的散射特性,主要是由于入射光谱的两个能量峰和DL探测器的结构。与所研究的其他方法相比,所提出的混合SC方法具有更高的准确性和鲁棒性,在颅-尾侧和中外侧-斜位视图中,所有LE和HE投影图像的不同幻象的MARE均为3.1%。SC后去除双能图像中的火罐伪影,对8 mm碘物体的信噪比提高82.0%。结论:开发了一种实用的SC方法,该方法提供了准确和稳健的散点估计,以提高DL-CEDBT的图像质量和病变可检测性。
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引用次数: 0
Automatic detection of main pancreatic duct dilation and pancreatic parenchymal atrophy based on a shape feature in abdominal contrast-enhanced CT images.
IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-01 Epub Date: 2025-01-31 DOI: 10.1117/1.JMI.12.1.014504
Shintaro Ambo, Ryo Hirano, Chihiro Hattori

Purpose: The purpose of this study was to develop and evaluate an algorithm for calculating a shape feature to automatically detect both main pancreatic duct dilation (MPDD) and pancreatic parenchymal atrophy (PPA) in abdominal contrast-enhanced CT (CE-CT) images.

Approach: The proposed algorithm for the automatic detection of MPDD and PPA is composed of five processes: coarse pancreas segmentation, fine pancreas segmentation, main pancreatic duct (MPD) segmentation, centerline estimation, and shape feature calculation. First, the pancreas region is segmented by a deep learning convolutional neural network (CNN). Then, the MPD region is segmented inside the pancreatic region by the deep learning CNN. Next, centerline estimation is performed using Dijkstra's rooting algorithm. Finally, in shape feature calculation, the cross-sectional area ratio of the pancreatic duct to the pancreatic parenchyma (DP ratio) is calculated in all cross sections perpendicular to the identified centerline, and the 90th percentile value of the DP ratio for all cross sections (90th DP ratio) is calculated. The detection performance of the 90th DP ratio for MPDD and PPA was evaluated using 56 abdominal CE-CT images available as public data.

Results: The average of the 90th DP ratio was 0.059 in 48 cases with MPDD and 0.007 in eight cases without MPDD ( p < 0.001 ) and 0.074 in 31 cases with PPA and 0.023 in 25 cases without PPA ( p < 0.001 ).

Conclusions: We have developed an algorithm for calculating an automatically measurable shape feature called the 90th DP ratio for the detection of MPDD and PPA.

{"title":"Automatic detection of main pancreatic duct dilation and pancreatic parenchymal atrophy based on a shape feature in abdominal contrast-enhanced CT images.","authors":"Shintaro Ambo, Ryo Hirano, Chihiro Hattori","doi":"10.1117/1.JMI.12.1.014504","DOIUrl":"10.1117/1.JMI.12.1.014504","url":null,"abstract":"<p><strong>Purpose: </strong>The purpose of this study was to develop and evaluate an algorithm for calculating a shape feature to automatically detect both main pancreatic duct dilation (MPDD) and pancreatic parenchymal atrophy (PPA) in abdominal contrast-enhanced CT (CE-CT) images.</p><p><strong>Approach: </strong>The proposed algorithm for the automatic detection of MPDD and PPA is composed of five processes: coarse pancreas segmentation, fine pancreas segmentation, main pancreatic duct (MPD) segmentation, centerline estimation, and shape feature calculation. First, the pancreas region is segmented by a deep learning convolutional neural network (CNN). Then, the MPD region is segmented inside the pancreatic region by the deep learning CNN. Next, centerline estimation is performed using Dijkstra's rooting algorithm. Finally, in shape feature calculation, the cross-sectional area ratio of the pancreatic duct to the pancreatic parenchyma (DP ratio) is calculated in all cross sections perpendicular to the identified centerline, and the 90th percentile value of the DP ratio for all cross sections (90th DP ratio) is calculated. The detection performance of the 90th DP ratio for MPDD and PPA was evaluated using 56 abdominal CE-CT images available as public data.</p><p><strong>Results: </strong>The average of the 90th DP ratio was 0.059 in 48 cases with MPDD and 0.007 in eight cases without MPDD ( <math><mrow><mi>p</mi> <mo><</mo> <mn>0.001</mn></mrow> </math> ) and 0.074 in 31 cases with PPA and 0.023 in 25 cases without PPA ( <math><mrow><mi>p</mi> <mo><</mo> <mn>0.001</mn></mrow> </math> ).</p><p><strong>Conclusions: </strong>We have developed an algorithm for calculating an automatically measurable shape feature called the 90th DP ratio for the detection of MPDD and PPA.</p>","PeriodicalId":47707,"journal":{"name":"Journal of Medical Imaging","volume":"12 1","pages":"014504"},"PeriodicalIF":1.9,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11782102/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143081749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Medical Imaging
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