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Three strategy rules of filamentous fungi in hydrocarbon remediation: an overview 丝状真菌在碳氢化合物修复中的三大战略规则:综述。
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-05-11 DOI: 10.1007/s10532-024-10086-1
Micheal Helan Soundra Rani, Ramesh Kumar Nandana, Alisha Khatun, Velumani Brindha, Durairaj Midhun, Ponnusamy Gowtham, Siva Shanmugam Dhanush Mani, Sivaraman Rathish Kumar, Anguraj Aswini, Sugumar Muthukumar

Remediation of hydrocarbon contaminations requires much attention nowadays since it causes detrimental effects on land and even worse impacts on aquatic environments. Tools of bioremediation especially filamentous fungi permissible for cleaning up as much as conceivable, at least they turn into non-toxic residues with less consumed periods. Inorganic chemicals, CO2, H2O, and cell biomass are produced as a result of the breakdown and mineralization of petroleum hydrocarbon pollutants. This paper presents a detailed overview of three strategic rules of filamentous fungi in remediating the various aliphatic, and aromatic hydrocarbon compounds: utilizing carbons from hydrocarbons as sole energy, Co-metabolism manners (Enzymatic and Non-enzymatic theories), and Biosorption approaches. Upliftment in the degradation rate of complex hydrocarbon by the Filamentous Fungi in consortia scenario we can say, “Fungal Talk”, which includes a variety of cellular mechanisms, including biosurfactant production, biomineralization, and precipitation, etc., This review not only displays its efficiency but showcases the field applications – cost-effective, reliable, eco-friendly, easy to culture as biomass, applicable in both land and any water bodies in operational environment cleanups. Nevertheless, the potentiality of fungi-human interaction has not been fully understood, henceforth further studies are highly endorsed with spore pathogenicity of the fungal species capable of high remediation rate, and the gene knockout study, if the specific peptides cause toxicity to any living matters via Genomics and Proteomics approaches, before application of any in situ or ex situ environments.

Graphical abstract

由于碳氢化合物污染会对陆地造成有害影响,甚至对水生环境造成更严重的影响,因此,碳氢化合物污染的补救措施如今备受关注。生物修复工具,尤其是丝状真菌,可以尽可能地清除污染,至少它们可以在较短的消耗时间内变成无毒的残留物。石油烃类污染物在分解和矿化过程中会产生无机化学物质、二氧化碳、水和细胞生物质。本文详细概述了丝状真菌在修复各种脂肪族和芳香族碳氢化合物方面的三种战略规则:利用碳氢化合物中的碳作为唯一能量、共代谢方式(酶和非酶理论)以及生物吸附方法。本综述不仅展示了真菌的效率,还展示了其在实地的应用--成本效益高、可靠、生态友好、易于作为生物质进行培养、适用于陆地和任何水体的操作环境清洁。然而,真菌与人类相互作用的潜力尚未得到充分了解,因此,在应用于任何原位或非原位环境之前,应通过基因组学和蛋白质组学方法,进一步研究具有高修复率的真菌物种的孢子致病性,以及基因敲除研究,以确定特定肽是否会对任何生物产生毒性。
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引用次数: 0
Study on microbial diversity of washing machines 洗衣机微生物多样性研究。
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-05-11 DOI: 10.1007/s10532-023-10069-8
Yunyi Cao, Shuai Yuan, Lingling Pang, Jiuyan Xie, Yi Gao, Jian Zhang, Zhenyao Zhao, Su Yao

Health and environmental protection are the development trend of household appliances, coupled with the impact of the COVID-19 epidemic in the past few years. Consumers have unprecedented concerns and expectations about the sterilization and disinfection functions of household appliances. As a washing and nursing equipment for household clothes, the anti-bacterial technology of washing machine has developed rapidly. The new models of washing machines in the market have basically added the function of sterilization. In order to thoroughly solve the problem of sterilization and bacteriostasis of washing machines from the source, the distribution of microbial contamination in washing machines should be fully investigated. At present, there is almost no systematic study on the microbial community structure in washing machines in China. Therefore, the purpose of this study is to analyze the bacterial community structure in Chinese household washing machines. To explore the key factors affecting the bacterial community structure of washing machines. Bacterial communities were comprehensively analyzed by high throughput sequencing. Using chao and shannon indexes as indicators, one-way ANOVA was used to explore the key factors affecting the bacterial community structure of washing machines. A total of 2,882,778 tags and 21,265 OTUs from 522 genera were sequenced from 56 washing machine samples. Genus Mycobacterium, Pseudomonas, Brevundimonas, Sphingomonas, Sphingobium, Enhydrobacter, Methylobacterium, Pseudoxanthomonas, Stenotrophomonas and Sphingopyxis were the top ten bacteria genera in abundance. The effects of sources, types, frequency of utilization, sampling locations and service life of washing machines on bacterial diversity in washing machine were systematically analyzed. The statistical analysis showed that service life was an important factor affecting bacterial diversity in washing machine. Our study lays a foundation for directional screening of characteristic microorganisms with targeted characters including malodor-producing, fouling, pathogenic and stress-resistance, the antibacterial evaluation, metabolic mechanism of key characteristic microorganisms as well as antibacterial materials development. At present, the sterilization technology of washing machines has not been fully in combination with the distribution survey of microorganisms in washing machines. According to the specific microorganism distribution condition of the washing machine, the key distribution positions and the types of specific microorganisms contained in different positions, conduct more targeted sterilization treatment. This will help to completely solve the problem of microbial growth in washing machines from the source.

健康环保是家用电器的发展趋势,再加上前几年 COVID-19 疫情的影响。消费者对家电产品的杀菌消毒功能产生了前所未有的关注和期待。作为家庭衣物的洗涤和护理设备,洗衣机的抗菌技术发展迅速。市场上的新型洗衣机基本都增加了除菌功能。为了从源头上彻底解决洗衣机的除菌抑菌问题,应充分调查洗衣机中微生物污染的分布情况。目前,国内几乎没有关于洗衣机中微生物群落结构的系统研究。因此,本研究旨在分析中国家用洗衣机中的细菌群落结构。探讨影响洗衣机细菌群落结构的关键因素。通过高通量测序对细菌群落进行全面分析。以chao和shannon指数为指标,采用单因素方差分析探讨影响洗衣机细菌群落结构的关键因素。对 56 个洗衣机样本中的 522 个菌属的 2,882,778 个标签和 21,265 个 OTU 进行了测序。分枝杆菌属、假单胞菌属、胸腺单胞菌属、鞘氨醇单胞菌属、恩氢杆菌属、甲基分支杆菌属、假黄单胞菌属、司来诺单胞菌属和鞘氨醇单胞菌属是数量最多的前十个菌属。系统分析了洗衣机的来源、类型、使用频率、采样地点和使用寿命对洗衣机细菌多样性的影响。统计分析结果表明,使用寿命是影响洗衣机细菌多样性的一个重要因素。我们的研究为有针对性地筛选产臭、污垢、致病、抗应激等特征微生物,对关键特征微生物进行抗菌评价、代谢机制研究以及抗菌材料开发奠定了基础。目前,洗衣机除菌技术还没有完全与洗衣机微生物分布调查相结合。根据洗衣机的具体微生物分布状况、重点分布位置以及不同位置所含特定微生物的种类,进行更有针对性的杀菌处理。这将有助于从源头上彻底解决洗衣机微生物滋生的问题。
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引用次数: 0
Inclusion of Pseudomonas fluorescens into soil-like fraction from municipal solid waste management park to enhance plastic biodegradation 在城市固体废物管理公园的类土壤成分中加入荧光假单胞菌以促进塑料的生物降解
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-30 DOI: 10.1007/s10532-024-10085-2
S. Sangeetha, P. Hari Krishna

Single-use facial masks which are predominantly made out of polypropylene is being used and littered in large quantities during post COVID-19 situation. Extensive researches on bioremediation of plastic pollution on soil led to the identification of numerous plastic degrading microorganisms. These organisms assimilate plastic polymers as their carbon source for synthesizing energy. Pseudomonas fluorescens (PF) is one among such microorganism which is being identified to biodegrade plastic polymers in controlled environment. The natural biodegradation of facial mask in soil-like fraction collected from municipal waste management site, bioaugmentation of the degradation process with Pseudomonas fluorescens, biostimulation of the soil with carbonless nutritional supplements and combined bioaugmentation with biostimulation process were studied in the present work. The study has been conducted both in controlled and in natural condition for a period of 12 months. The efficiency of the degradation was verified through FTIR analyses using carbonyl index, bond energy change, Loss in ignition (LOI) measurement along with CHNS analyses of residual substances. The analysis of results reported that carbonyl index (in terms of transmittance) was reduced to 46% of the control batch through the inclusion of PF in natural condition. The bioaugmented batch maintained in natural condition showed 33% reduction of LOI with respect to the control batch. The unburnt carbon content of the residual matter obtained from the furnace were analysed using CHNS analyser and indicated the lowest carbon content in the same bioaugmented batch. In this study, an attempt is made to verify the feasibility of enhancing biodegradation of single-use facial mask by bioaugmentation of soil-like fraction available in solid waste management park with Pseudomonas fluorescens under natural condition. CHNS and FTIR analysis assures the biodegradation of plastic waste in the soil-like fraction using Pseudomonas fluorescens under both controlled and natural environmental condition.

Graphical abstract

在 COVID-19 事件后的情况下,一次性口罩主要由聚丙烯制成,被大量使用和丢弃。通过对土壤中塑料污染的生物修复进行广泛研究,发现了许多降解塑料的微生物。这些微生物吸收塑料聚合物作为碳源来合成能量。荧光假单胞菌(PF)就是这类微生物中的一种,目前已发现它能在受控环境中生物降解塑料聚合物。本研究对从城市垃圾处理场收集的类似土壤的部分中面膜的自然生物降解、荧光假单胞菌对降解过程的生物增强、无碳营养补充剂对土壤的生物刺激以及生物增强与生物刺激相结合的过程进行了研究。研究在受控和自然条件下进行,为期 12 个月。通过使用羰基指数、键能变化、点燃损失(LOI)测量和残留物质的 CHNS 分析进行傅立叶变换红外分析,验证了降解的效率。结果分析表明,在自然条件下加入 PF 后,羰基指数(透射率)降低到对照批次的 46%。与对照批次相比,在自然条件下保持的生物增强批次的 LOI 降低了 33%。使用 CHNS 分析仪分析了从熔炉中获得的残余物中未燃烧的碳含量,结果表明在同一批生物增量材料中碳含量最低。本研究试图验证在自然条件下,利用荧光假单胞菌对固体废物管理公园中的类土部分进行生物增强,以提高一次性面膜生物降解的可行性。CHNS和傅立叶变换红外分析确保了在受控和自然环境条件下,利用荧光假单胞菌对土壤样部分中的塑料废物进行生物降解。
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引用次数: 0
Bioremediation of petroleum refinery wastewater by fungal stains isolated from the fishing harbour of Bizerte (Mediterranean Sea) 从比泽特渔港(地中海)分离出的真菌菌渍对石油精炼废水的生物修复作用
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-30 DOI: 10.1007/s10532-024-10083-4
Tahani El Ayari, Rihab Bouhdida, Hadda Imene Ouzari, Najoua Trigui El Menif

The study was conducted in order to explore the potential of fungi isolated from surface and bottom seawater collected from the fishing harbour of Bizerte on the bioremediation of industrial effluent (IE) contaminated by petroleum hydrocarbon. Among the 128 fungal isolates, 11 were isolated from surface seawater and 7 from bottom seawater, representing 18 taxa in total. The gas chromatography mass spectrometry (GC–MS) was used for the determination of hydrocarbon compounds in IE. An initial screening of fungal growth using six concentrations ranged between 20 and 70% (v/v) IE has allowed the identification of the optimal concentration for fungal growth as well as selection of species able to tolerate high amounts of hydrocarbon. Colorimetric test employing 2,6-dichlorophenol indophenol and gravimetric method was applied for the assessment of fungal growth using 20% EI. By checking the phylogenetic affiliation of the high-performing stains as identified using ITSr DNA sequence, a dominance of Ascomycetes was detected. Indeed, Aspergillus terreus and Penicillium expansum may degrade 82.07 and 81.76% of residual total petroleum hydrocarbon (TPH), respectively. Both species were collected from surface seawater. While, Aspergillus niger, Colletotrichum sp and Fusarium annulatum displayed comparable degradation rates 40.43%, 41.3%, and 42.03%, respectively. The lowest rate of degradation 33.62% was detected in Emericellopsis phycophila. All those species were isolated from bottom seawater, excepting A. niger isolated from surface water. This work highlighted the importance of exploring the potential of fungi isolated from the natural environment on the bioremediation of industrial effluent. Our results promoted the investigation of the potential of the high-performing isolates A. terreus and P. expansum on the bioremediation of IE at pilot-scale and then in situ.

这项研究旨在探索从比泽特渔港采集的表层和底层海水中分离出的真菌对受石油烃污染的工业废水(IE)进行生物修复的潜力。在 128 个真菌分离物中,11 个来自表层海水,7 个来自底层海水,共代表 18 个类群。气相色谱质谱法(GC-MS)用于测定 IE 中的碳氢化合物。使用浓度在 20% 至 70% (v/v) 之间的六种 IE 对真菌生长进行了初步筛选,从而确定了真菌生长的最佳浓度,并筛选出能够耐受大量碳氢化合物的物种。采用 2,6-二氯苯酚靛酚比色法和重量法来评估使用 20% EI 的真菌生长情况。通过检查使用 ITSr DNA 序列鉴定的高效染色剂的系统发育隶属关系,发现子囊菌属占主导地位。事实上,土曲霉和扩张青霉可分别降解 82.07% 和 81.76% 的残留总石油烃(TPH)。这两个菌种都是从表层海水中采集的。黑曲霉、壳斗霉和环状镰刀菌的降解率相当,分别为 40.43%、41.3% 和 42.03%。Emericellopsis phycophila 的降解率最低,为 33.62%。所有这些物种都是从海底海水中分离出来的,只有 A. niger 从地表水中分离出来。这项工作强调了探索从自然环境中分离的真菌对工业废水进行生物修复的潜力的重要性。我们的研究结果促进了对分离自自然环境的高产真菌 A. terreus 和 P. expansum 在中试规模和原位对 IE 进行生物修复的潜力的研究。
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引用次数: 0
Valorization of waste engine oil to mono- and di-rhamnolipid in a sustainable approach to circular bioeconomy 以可持续的方式实现循环生物经济,将废机油转化为单鼠李糖脂和双鼠李糖脂。
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-25 DOI: 10.1007/s10532-024-10081-6
Shailee Gaur, Mohan Jujaru, Revanth Vennu, Suresh Gupta, Amit Jain

This study aims to valorize waste engine oil (WEO) for synthesizing economically viable biosurfactants (rhamnolipids) to strengthen the circular bioeconomy concept. It specifically focuses on investigating the influence of key bioprocess parameters, viz. agitation and aeration rates, on enhancing rhamnolipid yield in a fed-batch fermentation mode. The methodology involves conducting experiments in a stirred tank bioreactor (3 L) using Pseudomonas aeruginosa gi |KP 163922| as the test organism. Central composite design and response surface methodology (CCD-RSM) are employed to design the experiments and analyze the effects of agitation and aeration rates on various parameters, including dry cell biomass (DCBM), surface tension, tensoactivity, and rhamnolipid yield. It is also essential to determine the mechanistic pathway of biosurfactant production followed by the strain using complex hydrophobic substrates such as WEO. The study reveals that optimal agitation and aeration rates of 200 rpm and 1 Lpm result in the highest biosurfactant yield of 29.76 g/L with minimal surface tension (28 mN/m). Biosurfactant characterization using FTIR, 1H NMR, and UPLC-MS/MS confirm the presence of dominant molecular ion peaks m/z 543.9 and 675.1. This suggests that the biosurfactant is a mixture of mono- and di-rhamnolipids (RhaC10C10, RhaRhaC10C12:1, RhaRhaC12:1C10). The findings present a sustainable approach for biosurfactant production in a fed-batch bioreactor. This research opens the possibility of exploring the use of pilot or large-scale bioreactors for biosurfactant production in future investigations.

Graphical abstract

本研究旨在利用废弃发动机油(WEO)合成经济上可行的生物表面活性剂(鼠李糖脂),以加强循环生物经济概念。该研究特别关注研究关键生物工艺参数(即搅拌和通气速率)对提高喂料批次发酵模式下鼠李脂产量的影响。研究方法包括在搅拌罐生物反应器(3 L)中使用铜绿假单胞菌 gi |KP 163922|作为试验生物进行实验。实验设计采用了中心复合设计和响应面方法(CCD-RSM),并分析了搅拌和通气速率对干细胞生物量(DCBM)、表面张力、张力活性和鼠李糖脂产量等各种参数的影响。此外,确定菌株使用 WEO 等复杂疏水基质生产生物表面活性剂的机理途径也很重要。研究表明,200 转/分钟和 1 升/分钟的最佳搅拌和通气速率可使生物表面活性剂产量达到 29.76 克/升,且表面张力最小(28 毫牛顿/米)。利用傅立叶变换红外光谱(FTIR)、1H NMR 和 UPLC-MS/MS 对生物表面活性剂进行表征,证实存在主要的分子离子峰 m/z 543.9 和 675.1。这表明生物表面活性剂是单鼠李糖脂和双鼠李糖脂(RhaC10C10、RhaRhaC10C12:1、RhaRhaC12:1C10)的混合物。研究结果提出了一种在喂料批次生物反应器中生产生物表面活性剂的可持续方法。这项研究为今后探索使用中试或大型生物反应器生产生物表面活性剂提供了可能。
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引用次数: 0
Degradation of pretilachlor and fenclorim and effects of these compounds on bacterial communities under anaerobic condition 厌氧条件下丙草胺和芬克林的降解及其对细菌群落的影响。
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-25 DOI: 10.1007/s10532-024-10078-1
Ha Danh Duc, Nguyen Thi Oanh, Nguyen Thi Dieu Thuy, Nguyen Thi Kim Xuan

Pretilachlor and safener fenclorim are the main components of herbicides widely applied to control weeds. Although some pure cultures of bacteria and fungi which degraded these compounds under aerobic conditions were isolated, no isolated pretilachlor- and fenclorim-degrading bacterial strains under anaerobic condition had been available. In this study, the degradation of these compounds and the effects of them on bacterial community structures were investigated under anaerobic conditions. The dissipation rates of pretilachlor and fenclorim in slurries were in the order: soil from paddy field ≈ sediment from river > sediment from mangrove. Moreover, three pretilachlor-degrading bacterial strains (Pseudomonas sp. Pr1, Proteiniclasticum sp. Pr2 and Paracoccus denitrificans Pr3) and two fenclorim-degrading strains (Dechloromonas sp. Fe1 and Ralstonia pickettii Fe2) isolated from a slurry of paddy soil utilized the substrates as sole carbon and energy sources under anaerobic conditions. The degradation of pure pretilachlor and fenclorim at various concentrations by corresponding mixed pure cultures followed the Michaelis–Menten model, with the maximum degradation was 3.10 ± 0.31 µM/day for pretilachlor, and 2.08 ± 0.18 µM/day for fenclorim. During the degradation, 2-chloro-N-(2,6-diethylphenyl) acetamide and 2,6-dimethylaniline were produced in pretilachlor degradation, and benzene was a product of fenclorim degradation. The synergistic degradation of both substrates by all isolated bacteria reduced the metabolites concentrations accumulated in media. This study provides valuable information on effects of pretilachlor and fenclorim on bacterial communities in soil and sediments, and degradation of these substrates by isolated bacteria under anaerobic condition.

预草胺和安全剂芬克林是广泛用于控制杂草的除草剂的主要成分。虽然分离出了一些在有氧条件下降解这些化合物的细菌和真菌纯培养物,但还没有分离出在厌氧条件下降解丙草胺和芬克林的细菌菌株。本研究调查了厌氧条件下这些化合物的降解情况及其对细菌群落结构的影响。前草胺和芬克林在泥浆中的消解率依次为:稻田土壤≈河流沉积物>;红树林沉积物。此外,在厌氧条件下,从水稻田土壤泥浆中分离出的三株降解前草胺的细菌(假单胞菌 Pr1、蛋白纤毛菌 Pr2 和反硝化副球菌 Pr3)和两株降解芬克林的细菌(Dechloromonas sp.相应的混合纯培养物对不同浓度的纯丙草胺和芬克林的降解遵循 Michaelis-Menten 模型,丙草胺的最大降解量为 3.10 ± 0.31 µM/天,芬克林的最大降解量为 2.08 ± 0.18 µM/天。在降解过程中,pretilachlor 降解产生 2-氯-N-(2,6-二乙基苯基)乙酰胺和 2,6-二甲基苯胺,fenclorim 降解产生苯。所有分离出来的细菌都能协同降解这两种底物,从而降低了培养基中积累的代谢物浓度。这项研究为了解前草胺和芬克林对土壤和沉积物中细菌群落的影响以及厌氧条件下分离细菌对这些底物的降解提供了有价值的信息。
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引用次数: 0
Bioprospecting of extremophilic perchlorate-reducing bacteria: report of promising Bacillus spp. isolated from sediments of the bay of Cartagena, Colombia 嗜极高氯酸盐还原菌的生物勘探:从哥伦比亚卡塔赫纳海湾沉积物中分离出的有希望的芽孢杆菌属的报告
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-16 DOI: 10.1007/s10532-024-10079-0
Rosa Acevedo-Barrios, Irina Tirado-Ballestas, Angela Bertel-Sevilla, Leonor Cervantes-Ceballos, Jorge L. Gallego, María Angélica Leal, David Tovar, Jesús Olivero-Verbel
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引用次数: 0
Performance, kinetic characteristics and bacterial community of short-cut nitrification and denitrification system at different ferrous ion conditions 不同亚铁离子条件下短程硝化和反硝化系统的性能、动力学特征和细菌群落
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-15 DOI: 10.1007/s10532-024-10080-7
Ben-ze Chang, Shuai Zhang, Dong-zhi Chen, Kai-tuo Gao, Guang-feng Yang

In order to explore the operation performance, kinetic characteristics and bacterial community of the short-cut nitrification and denitrification (SND) system, the SND system with pre-cultured short cut nitrification and denitrification sludge was established and operated under different ferrous ion (Fe (II)) conditions. Experimental results showed that the average NH4+–N removal efficiency (ARE) of SND system was 97.3% on Day 5 and maintained a high level of 94.9% ± 1.3% for a long operation period. When the influent Fe(II) concentration increased from 2.3 to 7.3 mg L−1, the sedimentation performance, sludge concentration and organic matter removal performance were improved. However, higher Fe(II) of 12.3 mg L−1 decreased the removal of nitrogen and CODCr with the relative abundance (RA) of Proteobacteria and Bacteroidetes decreased to 30.28% and 19.41%, respectively. Proteobacteria, Bacteroidetes and Firmicutes were the dominant phyla in SND system. Higher Fe(II) level of 12.3 mg L−1 increase the RA of denitrifying genus Trichococcus (33.93%), and the denitrifying genus Thauera and Tolumonas dominant at Fe(II) level of no more than 7.3 mg L−1.

Graphical abstract

为了探索短切硝化反硝化(SND)系统的运行性能、动力学特征和细菌群落,建立了预培养短切硝化反硝化污泥的 SND 系统,并在不同亚铁离子(Fe (II))条件下运行。实验结果表明,SND 系统对 NH4+-N 的平均去除率(ARE)在第 5 天达到 97.3%,并在较长时间内保持在 94.9%±1.3% 的较高水平。当进水 Fe(II) 浓度从 2.3 mg L-1 增加到 7.3 mg L-1 时,沉淀性能、污泥浓度和有机物去除性能均有所改善。然而,当 Fe(II) 浓度达到 12.3 mg L-1 时,氮和 CODCr 的去除率下降,变形菌和类杆菌的相对丰度(RA)分别下降到 30.28% 和 19.41%。在 SND 系统中,变形菌、类杆菌和固着菌是优势菌门。较高的 Fe(II) 含量(12.3 毫克/升-1)增加了反硝化属毛球菌的 RA(33.93%),而反硝化属 Thauera 和 Tolumonas 在 Fe(II) 含量不超过 7.3 毫克/升-1 时占优势。
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引用次数: 0
Genome analysis of a newly isolated Bacillus velezensis-YW01 for biodegrading acetaldehyde 新分离的乙醛生物降解芽孢杆菌-YW01 的基因组分析
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-04-04 DOI: 10.1007/s10532-024-10075-4
Jingjing Wang, Zhihao Wang, Chao Liu, Meijie Song, Qianqian Xu, Yang Liu, Hai Yan

Acetaldehyde (AL), a primary carcinogen, not only pollutes the environment, but also endangers human health after drinking alcohol. Here a promising bacterial strain was successfully isolated from a white wine cellar pool in the province of Shandong, China, and identified as Bacillus velezensis-YW01 with 16 S rDNA sequence. Using AL as sole carbon source, initial AL of 1 g/L could be completely biodegraded by YW01 within 84 h and the cell-free extracts of YW01 has also been detected to biodegrade the AL, which indicate that YW01 is a high-potential strain for the biodegradation of AL. The optimal culture conditions and the biodegradation of AL of YW01 are at pH 7.0 and 38 °C, respectively. To further analyze the biodegradation mechanism of AL, the whole genome of YW01 was sequenced. Genes ORF1040, ORF1814 and ORF0127 were revealed in KEGG, which encode for acetaldehyde dehydrogenase. Furthermore, ORF0881 and ORF052 encode for ethanol dehydrogenase. This work provides valuable information for exploring metabolic pathway of converting ethanol to AL and subsequently converting AL to carboxylic acid compounds, which opened up potential pathways for the development of microbial catalyst against AL.

乙醛(AL)是一种初级致癌物,不仅污染环境,而且饮酒后还会危害人体健康。本文从中国山东省的一个白酒窖池中成功分离出了一株很有希望的细菌,经鉴定,该菌株名为 Bacillus velezensis-YW01,具有 16 S rDNA 序列。以AL为唯一碳源,1 g/L的初始AL可在84 h内被YW01完全生物降解,YW01的无细胞提取物也被检测到可生物降解AL,这表明YW01是一种生物降解AL的高潜力菌株。YW01 的最佳培养条件和对 AL 的生物降解温度分别为 pH 7.0 和 38 ℃。为了进一步分析 AL 的生物降解机制,对 YW01 进行了全基因组测序。在 KEGG 中发现了编码乙醛脱氢酶的基因 ORF1040、ORF1814 和 ORF0127。此外,ORF0881 和 ORF052 编码乙醇脱氢酶。这项工作为探索乙醇转化为 AL 并进而将 AL 转化为羧酸化合物的代谢途径提供了宝贵的信息,为开发抗 AL 微生物催化剂开辟了潜在的途径。
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引用次数: 0
Phenol biodegradation using bio-filter tower packed column with immobilized bacterial consortium: a batch test study 使用生物滤塔填料柱与固定化细菌群进行苯酚生物降解:批量试验研究。
IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-03-26 DOI: 10.1007/s10532-024-10074-5
Preeti Sachan, Athar Hussain, Sangeeta Madan, Utkarsh Singh, Manjeeta Priyadarshi

The effluents from pulp and paper manufacturing industries contain high concentrations of phenol, which when discharged directly into surface water streams, increases the biological oxygen demand (BOD) and chemical oxygen demand (COD). In this study, two dominant bacteria SP-4 and SP-8 were isolated from the effluent emanating with a pulp and paper industry. The selected phenol-degrading isolates were identified as Staphylococcus sp. and Staphylococcus sciuri respectively by using nucleotide sequence alignment and phylogenetic analysis of 16 S rRNA regions of the genome. The two isolates used for the biodegradation process effectively degraded phenol concentration of pulp and paper industry effluent upto 1600 and 1800 mg/L resepctively. The individual isolates and consortium were immobilized using activated carbon, wood dust, and coal ash. Additionally, the effluent was treated using a bio-filter tower packed column immobilized with bacterial cells at a constant flow rate of 5 mL/min. The present study showed that the developed immobilized microbial consortium can effectively degrade 99% of the phenol present in pulp and paper industry effluents, resulting in a significant reduction in BOD and COD of the system. This study can be well implemented on real-scale systems as the bio-filter towers packed with immobilized bacterial consortium can effectively treat phenol concentrations up to 1800 mg/L. The study can be implemented for bioremediation processes in phenolic wastewater-contaminated sites.

纸浆和造纸工业的废水中含有高浓度的苯酚,直接排放到地表水流中会增加生物需氧量(BOD)和化学需氧量(COD)。本研究从纸浆和造纸工业排放的废水中分离出两种优势细菌 SP-4 和 SP-8。通过对基因组 16 S rRNA 区域进行核苷酸序列比对和系统发育分析,确定所选的苯酚降解分离菌分别为 Staphylococcus sp.和 Staphylococcus sciuri。这两种用于生物降解过程的分离菌株能有效降解纸浆和造纸工业污水中的苯酚,降解浓度分别高达 1600 和 1800 mg/L。使用活性炭、木屑和煤灰固定了单个分离物和联合体。此外,还使用固定了细菌细胞的生物滤塔填料柱以 5 mL/min 的恒定流速处理污水。本研究表明,所开发的固定化微生物菌群可有效降解制浆造纸工业污水中 99% 的苯酚,从而显著降低系统的生化需氧量和化学需氧量。这项研究可以很好地应用于实际规模的系统中,因为装有固定化细菌群的生物滤塔可以有效处理浓度高达 1800 毫克/升的苯酚。这项研究可用于酚类废水污染场地的生物修复过程。
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Biodegradation
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