The abundant variety of yeasts and their diverse applications have essential roles in traditional Mexican alcoholic beverage fermentation processes. During our investigation of yeast diversity associated with Pulque, 41 yeast strains were characterized. Among them, 31 strains were eight known species belonging to seven genera. According to morphological and phylogenetic analyses (ITS and LSU rDNA), ten unidentified yeast strains were identified to be three novel species and proposed: Starmerellaelongatumsp. nov., Kazachstaniaparagamosporasp. nov. and Pichiateotihuacanensissp. nov. Our study has resulted in the isolation of yeast species not previously detected in Pulque, expanding our knowledge of the diversity of its associated yeast communities.
{"title":"Three novel Ascomycota (Saccharomycetes, Saccharomycetales) yeast species derived from the traditional Mexican alcoholic beverage Pulque.","authors":"Chunyue Chai, Dan Lu, Jinli Liu, Eentao Wang, Xuemei Han, Fengli Hui","doi":"10.3897/mycokeys.109.123870","DOIUrl":"https://doi.org/10.3897/mycokeys.109.123870","url":null,"abstract":"<p><p>The abundant variety of yeasts and their diverse applications have essential roles in traditional Mexican alcoholic beverage fermentation processes. During our investigation of yeast diversity associated with Pulque, 41 yeast strains were characterized. Among them, 31 strains were eight known species belonging to seven genera. According to morphological and phylogenetic analyses (ITS and LSU rDNA), ten unidentified yeast strains were identified to be three novel species and proposed: <i>Starmerellaelongatum</i> <b>sp. nov.</b>, <i>Kazachstaniaparagamospora</i> <b>sp. nov.</b> and <i>Pichiateotihuacanensis</i> <b>sp. nov.</b> Our study has resulted in the isolation of yeast species not previously detected in Pulque, expanding our knowledge of the diversity of its associated yeast communities.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11484639/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142478279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Two new mushroom species from Southwest China, Pholiotacylindrospora and P.subterrestris, are described in this study. Pholiotacylindrospora is characterized by its dry pileus with slightly recurved and triangular scales, cylindrical basidiospores, and two types of pleurocystidia-leptocystidia and chrysocystidia-as well as its growth on soil. Pholiotasubterrestris is identified by a brownish-orange pileus with numerous brown fibrillose scales; pale brown lamellae with even edges; a stipe covered with recurved fibrillose scales; elliptical spores with a distinct but small germ pore; and pleurocystidia containing typical amorphous refractive inclusions of chrysocystidia. Both species are described and illustrated, and a phylogenetic analysis of a multigene dataset (ITS + 28S) is presented. Morphological and phylogenetic analyses confirm that P.cylindrospora and P.subterrestris are distinct from the other Pholiota species, and both belong to the subgenus Pholiota. A key to the species of subgenus Pholiota from China is provided.
{"title":"Two new species of <i>Pholiota</i> (Agaricales, Strophariaceae) from the southwest of China.","authors":"Jia-Hui Huang, Chun-Yu Lei, Ya-Lun Shen, En-Jing Tian","doi":"10.3897/mycokeys.109.133879","DOIUrl":"https://doi.org/10.3897/mycokeys.109.133879","url":null,"abstract":"<p><p>Two new mushroom species from Southwest China, <i>Pholiotacylindrospora</i> and <i>P.subterrestris</i>, are described in this study. <i>Pholiotacylindrospora</i> is characterized by its dry pileus with slightly recurved and triangular scales, cylindrical basidiospores, and two types of pleurocystidia-leptocystidia and chrysocystidia-as well as its growth on soil. <i>Pholiotasubterrestris</i> is identified by a brownish-orange pileus with numerous brown fibrillose scales; pale brown lamellae with even edges; a stipe covered with recurved fibrillose scales; elliptical spores with a distinct but small germ pore; and pleurocystidia containing typical amorphous refractive inclusions of chrysocystidia. Both species are described and illustrated, and a phylogenetic analysis of a multigene dataset (ITS + 28S) is presented. Morphological and phylogenetic analyses confirm that <i>P.cylindrospora</i> and <i>P.subterrestris</i> are distinct from the other Pholiota species, and both belong to the subgenus Pholiota. A key to the species of subgenus Pholiota from China is provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11480669/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142478281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-03eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.127606
Eugene Yurchenko, Ewald Langer, Janett Riebesehl
A study of corticioid fungi collections from Costa Rica, Panama, Colombia, and Ecuador has resulted in the identification of 26 morphospecies of Lyomyces. These distinctions were made based on characters such as basidiospore size and shape, cystidia morphology, basidioma texture, and hymenial surface configuration. Sequences of rDNA ITS were obtained for 12 of these species, and their relationships to previously known taxa were illustrated using Bayesian and Maximum Likelihood reconstructions of the phylogeny. Protologues are given for 10 new species of Lyomyces: L.boquetensis (found in Panama, belonging to L.sambuci group), L.granulosus (from Costa Rica and Panama, related to L.fimbriatus), L.napoensis (from Ecuador, related to L.elaeidicola), L.neocrustosus (from Panama, L.crustosus group), L.oleifer (from Ecuador, L.crustosus group), L.pantropicus (from Panama and Ecuador, related to L.microfasciculatus), L.orarius (from Ecuador, L.sambuci group), L.parvus (from Costa Rica and Ecuador, L.crustosus group), L.sceptrifer (from Ecuador, related to L.gatesiae), and L.subcylindricus (from Panama, L.crustosus group). Macro- and micro-morphology illustrations are provided for these new species. Additionally, the range of L.organensis is extended to Ecuador. Scanning electron microscopy of crystalline deposits in basidiomata has shown the differences in crystal size and aggregation manner between species.
{"title":"A high species diversity of <i>Lyomyces</i> (Basidiomycota, Hymenochaetales) in Central and South America, revealed after morphological and molecular analysis.","authors":"Eugene Yurchenko, Ewald Langer, Janett Riebesehl","doi":"10.3897/mycokeys.109.127606","DOIUrl":"https://doi.org/10.3897/mycokeys.109.127606","url":null,"abstract":"<p><p>A study of corticioid fungi collections from Costa Rica, Panama, Colombia, and Ecuador has resulted in the identification of 26 morphospecies of <i>Lyomyces</i>. These distinctions were made based on characters such as basidiospore size and shape, cystidia morphology, basidioma texture, and hymenial surface configuration. Sequences of rDNA ITS were obtained for 12 of these species, and their relationships to previously known taxa were illustrated using Bayesian and Maximum Likelihood reconstructions of the phylogeny. Protologues are given for 10 new species of <i>Lyomyces</i>: <i>L.boquetensis</i> (found in Panama, belonging to <i>L.sambuci</i> group), <i>L.granulosus</i> (from Costa Rica and Panama, related to <i>L.fimbriatus</i>), <i>L.napoensis</i> (from Ecuador, related to <i>L.elaeidicola</i>), <i>L.neocrustosus</i> (from Panama, <i>L.crustosus</i> group), <i>L.oleifer</i> (from Ecuador, <i>L.crustosus</i> group), <i>L.pantropicus</i> (from Panama and Ecuador, related to <i>L.microfasciculatus</i>), <i>L.orarius</i> (from Ecuador, <i>L.sambuci</i> group), <i>L.parvus</i> (from Costa Rica and Ecuador, <i>L.crustosus</i> group), <i>L.sceptrifer</i> (from Ecuador, related to <i>L.gatesiae</i>), and <i>L.subcylindricus</i> (from Panama, <i>L.crustosus</i> group). Macro- and micro-morphology illustrations are provided for these new species. Additionally, the range of <i>L.organensis</i> is extended to Ecuador. Scanning electron microscopy of crystalline deposits in basidiomata has shown the differences in crystal size and aggregation manner between species.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11467506/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142478276","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In our ongoing research on bambusicolous Xylariomycetidae fungi, three new microfungi taxa were collected and identified as members of the genera Amphibambusa, Arecophila, and Nigropunctata. Amphibambusaaureaesp. nov., Arecophilagaofengensissp. nov., and Nigropunctataxiaohensissp. nov. are introduced based on morphological comparisons and phylogenetic analyses using combined ITS, LSU, tub2, and tef1α loci. Comprehensive morphological descriptions, illustrations, and a phylogenetic tree showcasing the placement of these new taxa are provided. Additionally, keys to Amphibambusa and Nigropunctata are provided.
{"title":"Addition of three new species of Xylariomycetidae fungi on bamboo from Southern China.","authors":"Xin Zhou, Kamran Habib, Wenyu Zeng, Yulin Ren, Xiangchun Shen, Jichuan Kang, Qirui Li","doi":"10.3897/mycokeys.109.128020","DOIUrl":"10.3897/mycokeys.109.128020","url":null,"abstract":"<p><p>In our ongoing research on bambusicolous Xylariomycetidae fungi, three new microfungi taxa were collected and identified as members of the genera <i>Amphibambusa</i>, <i>Arecophila</i>, and <i>Nigropunctata</i>. <i>Amphibambusaaureae</i> <b>sp. nov.</b>, <i>Arecophilagaofengensis</i> <b>sp. nov.</b>, and <i>Nigropunctataxiaohensis</i> <b>sp. nov.</b> are introduced based on morphological comparisons and phylogenetic analyses using combined ITS, LSU, <i>tub2</i>, and <i>tef</i>1α loci. Comprehensive morphological descriptions, illustrations, and a phylogenetic tree showcasing the placement of these new taxa are provided. Additionally, keys to <i>Amphibambusa</i> and <i>Nigropunctata</i> are provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464901/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142401669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-02eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.128060
Wan-Hao Chen, Dan Li, Jian-Dong Liang, Xiu-Xiu Ren, Jie-Hong Zhao, Yan-Feng Han
Two new species, Chlorocilliumsinense and Calcarisporiumguizhouense, isolated from a spider and fruiting body of Cordyceps sp., are introduced. Morphological comparisons and phylogenetic analyses based on multigene datasets (ITS+LSU+RPB2+tef-1alpha) support the establishment of the new species. A combined dataset of ITS, LSU, RPB2, and tef-1alpha showed the taxonomic placement of Chlorocillium in Clavicipitaceae for the first time. Pseudometarhizium is regarded as a synonym of Chlorocillium and two Pseudometarhizium species are transferred into the latter based on the phylogenetic analysis and morphological characteristics.
{"title":"<i>Chlorocilliumsinense</i> sp. nov. (Clavicipitaceae) and <i>Calcarisporiumguizhouense</i> sp. nov. (Calcarisporiaceae) in Hypocreales from China.","authors":"Wan-Hao Chen, Dan Li, Jian-Dong Liang, Xiu-Xiu Ren, Jie-Hong Zhao, Yan-Feng Han","doi":"10.3897/mycokeys.109.128060","DOIUrl":"10.3897/mycokeys.109.128060","url":null,"abstract":"<p><p>Two new species, <i>Chlorocilliumsinense</i> and <i>Calcarisporiumguizhouense</i>, isolated from a spider and fruiting body of <i>Cordyceps</i> sp., are introduced. Morphological comparisons and phylogenetic analyses based on multigene datasets (ITS+LSU+<i>RPB2</i>+<i>tef</i>-1alpha) support the establishment of the new species. A combined dataset of ITS, LSU, <i>RPB2</i>, and <i>tef</i>-1alpha showed the taxonomic placement of <i>Chlorocillium</i> in Clavicipitaceae for the first time. <i>Pseudometarhizium</i> is regarded as a synonym of <i>Chlorocillium</i> and two <i>Pseudometarhizium</i> species are transferred into the latter based on the phylogenetic analysis and morphological characteristics.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464903/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142401668","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-26eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.128960
Di Zhang, Jun-Jie Peng, Jia-Jun Wang, A K Hasith Priyashnatha, Jin-Peng Liao, Hua-Xing Luo, Shi-Chen Huang, Ji-Ze Xu
In this study, we have found two new species-Strophariasubrugosoannulata and Strophariamicroaeruginosa. Phylogenetic analyses, based on the internal transcribed spacer regions (ITS) and the nuclear ribosomal RNA gene (nrLSU), suggest that the two new species are distinct and monophyletic. S.subrugosoannulata is distinguished from other species of the genus Stropharia by the pileus covered with greyish-orange squamules in the centre, stipe light brown and surface covered with white triangular squamules. S.microaeruginosa differs from other species in its pileus bluish-grey when young becoming lighter towards margins, later greyish-turquoise lightens towards the edges and surface radially striate when young, lamellae adnate to subdecurrent, stipe with white squamules at the base, acanthocytes absent. The new record species from Jilin Province, Clitolyophyllumumbilicatum was also confirmed, based on morphological and molecular study. Here, we have given full descriptions of each species, colour images, illustrations and two phylogenetic trees that show the placement and relationship of the two new species and the new record are provided.
{"title":"Morphological characteristics and phylogenetic analyses revealed two new species from China and a new record from Jilin Province of Agaricales.","authors":"Di Zhang, Jun-Jie Peng, Jia-Jun Wang, A K Hasith Priyashnatha, Jin-Peng Liao, Hua-Xing Luo, Shi-Chen Huang, Ji-Ze Xu","doi":"10.3897/mycokeys.109.128960","DOIUrl":"10.3897/mycokeys.109.128960","url":null,"abstract":"<p><p>In this study, we have found two new species-<i>Strophariasubrugosoannulata</i> and <i>Strophariamicroaeruginosa</i>. Phylogenetic analyses, based on the internal transcribed spacer regions (ITS) and the nuclear ribosomal RNA gene (nrLSU), suggest that the two new species are distinct and monophyletic. <i>S.subrugosoannulata</i> is distinguished from other species of the genus <i>Stropharia</i> by the pileus covered with greyish-orange squamules in the centre, stipe light brown and surface covered with white triangular squamules. <i>S.microaeruginosa</i> differs from other species in its pileus bluish-grey when young becoming lighter towards margins, later greyish-turquoise lightens towards the edges and surface radially striate when young, lamellae adnate to subdecurrent, stipe with white squamules at the base, acanthocytes absent. The new record species from Jilin Province, <i>Clitolyophyllumumbilicatum</i> was also confirmed, based on morphological and molecular study. Here, we have given full descriptions of each species, colour images, illustrations and two phylogenetic trees that show the placement and relationship of the two new species and the new record are provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11450463/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383311","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-26eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.124975
Tao Sun, Yue Chen, Dong Wang, Yongdong Dai, Weiqiu Zou, Run Luo, Quanying Dong, Hong Yu
Ophiocordyceps encompasses over 300 species, demonstrating a wide range of morphological features, hosts and habitats within its species diversity. In this study, two novel species in Ophiocordyceps were revealed parasitising Hepialidae larva buried in soil. Ophiocordycepsalbastroma was morphologically characterised by white stromata, solitary and cylindrical conidiogenous cells and smooth ovoid or ellipsoidal conidia. Ophiocordycepsnigristroma was characterised by woody and dark brown stromata, monophialidic, swollen base and lageniform conidiogenous cells and smooth fusiform or oval conidia. The two new species formed a separate clade, respectively, based on the phylogenetic analyses of a combined dataset including nrSSU, nrLSU, rpb1, rpb2, and tef-1α, as well as a dataset of mitochondrial 14 protein coding genes (PCGs). They were all closely grouped with O.sinensis. The mitochondrial genomes of them were first reported. Their mitogenomes were all typical of circular molecules, with positive AT and GC skew, similar GC content, similar genetic composition, similar codon usage and conservative gene positions. However, the length of the mitogenomes varied. Changes in the length of the genes were the leading cause of changes in the length of mitochondrial genome of Ophiocordyceps. The discovery and identification of new Ophiocordyceps species and analysis their mitochondrial genomes may serve as foundations for phylogeny and diversity research within the genus Ophiocordyceps.
{"title":"Mitogenomics, phylogeny and morphology reveal two new entomopathogenic species of <i>Ophiocordyceps</i> (Ophiocordycipitaceae, Hypocreales) from south-western China.","authors":"Tao Sun, Yue Chen, Dong Wang, Yongdong Dai, Weiqiu Zou, Run Luo, Quanying Dong, Hong Yu","doi":"10.3897/mycokeys.109.124975","DOIUrl":"10.3897/mycokeys.109.124975","url":null,"abstract":"<p><p><i>Ophiocordyceps</i> encompasses over 300 species, demonstrating a wide range of morphological features, hosts and habitats within its species diversity. In this study, two novel species in <i>Ophiocordyceps</i> were revealed parasitising Hepialidae larva buried in soil. <i>Ophiocordycepsalbastroma</i> was morphologically characterised by white stromata, solitary and cylindrical conidiogenous cells and smooth ovoid or ellipsoidal conidia. <i>Ophiocordycepsnigristroma</i> was characterised by woody and dark brown stromata, monophialidic, swollen base and lageniform conidiogenous cells and smooth fusiform or oval conidia. The two new species formed a separate clade, respectively, based on the phylogenetic analyses of a combined dataset including nrSSU, nrLSU, <i>rpb1</i>, <i>rpb2</i>, and <i>tef-1α</i>, as well as a dataset of mitochondrial 14 protein coding genes (PCGs). They were all closely grouped with <i>O.sinensis</i>. The mitochondrial genomes of them were first reported. Their mitogenomes were all typical of circular molecules, with positive AT and GC skew, similar GC content, similar genetic composition, similar codon usage and conservative gene positions. However, the length of the mitogenomes varied. Changes in the length of the genes were the leading cause of changes in the length of mitochondrial genome of <i>Ophiocordyceps</i>. The discovery and identification of new <i>Ophiocordyceps</i> species and analysis their mitochondrial genomes may serve as foundations for phylogeny and diversity research within the genus <i>Ophiocordyceps</i>.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11450462/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142382087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-24eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.129791
Wenhua Lu, Pumin Nutaratat, Jaturong Kumla, Saowaluck Tibpromma, Abdallah M Elgorban, Samantha C Karunarathna, Nakarin Suwannarach
Marasmiellus (Omphalotaceae, Agaricales) specimens collected in Thailand were investigated based on morphological characteristics and molecular phylogenetic analyses. In the present study, two species are introduced as new to science, namely Marasmiellusthailandicus and M.minutisporus. Phylogenetic analyses were carried out based on the internal transcribed spacer (nrITS) and nuclear ribosomal RNA large subunit (nrLSU) regions, and the results revealed that the two new taxa are distinct species within Marasmiellus. Another specimen was identified as M.scandens and is reported for the first time with morphology and molecular data from Thailand. Descriptions, illustrations, and phylogenetic results are provided. In addition, M.diaphanus and M.colocasiae are proposed as new combinations of Collybiopsisdiaphana and Paramarasmiuscolocasiae, respectively, based on the phylogenetic evidence.
{"title":"Morphological and molecular identification of two new <i>Marasmiellus</i> species (Omphalotaceae, Agaricales) from Thailand.","authors":"Wenhua Lu, Pumin Nutaratat, Jaturong Kumla, Saowaluck Tibpromma, Abdallah M Elgorban, Samantha C Karunarathna, Nakarin Suwannarach","doi":"10.3897/mycokeys.109.129791","DOIUrl":"10.3897/mycokeys.109.129791","url":null,"abstract":"<p><p><i>Marasmiellus</i> (Omphalotaceae, Agaricales) specimens collected in Thailand were investigated based on morphological characteristics and molecular phylogenetic analyses. In the present study, two species are introduced as new to science, namely <i>Marasmiellusthailandicus</i> and <i>M.minutisporus</i>. Phylogenetic analyses were carried out based on the internal transcribed spacer (nrITS) and nuclear ribosomal RNA large subunit (nrLSU) regions, and the results revealed that the two new taxa are distinct species within <i>Marasmiellus</i>. Another specimen was identified as <i>M.scandens</i> and is reported for the first time with morphology and molecular data from Thailand. Descriptions, illustrations, and phylogenetic results are provided. In addition, <i>M.diaphanus</i> and <i>M.colocasiae</i> are proposed as new combinations of <i>Collybiopsisdiaphana</i> and <i>Paramarasmiuscolocasiae</i>, respectively, based on the phylogenetic evidence.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11445607/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142367090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-17eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.109.132941
Xiaojie Zhang, Fulei Shi, Ke Yang, Changlin Zhao
Taxonomy plays a central role in understanding the diversity of life, translating the products of biological exploration and discovery specimens and observations into systems of names that settle a "classification home" to taxa. Up to this point, studies on the taxonomy and phylogeny of the basidiomycetous genus Tomentella stemmed mainly from the temperate to boreal zones of the North Hemisphere, but were scarce in tropical Asia. In this study, four new species, viz. Tomentellaolivaceobasidiosa, T.velutina, T.wumenshanensis and T.yunnanensis from China, are described and illustrated based on the morphological characteristics and molecular phylogenetic analyses, in which the sequences of ITS+nLSU+mtSSU+RPB2 genes were used for the phylogenetic analyses using Maximum Likelihood, Maximum Parsimony and Bayesian Inference methods. All the new species can be well recognised by their macroscopical and anatomical characteristics. The four new species, closely related taxa in the phylogenetic tree and morphologically similar species are discussed.
分类学在了解生命多样性方面发挥着核心作用,它将生物探索和发现的标本和观察结果转化为名称系统,为类群确定 "分类归宿"。到目前为止,关于担子菌属(Basidiomycetous genus Tomentella)的分类学和系统发育的研究主要来自北半球的温带和寒带,但在亚洲热带地区却很少见。本研究基于形态学特征和分子系统学分析,采用最大似然法、最大解析法和贝叶斯推断法对ITS+nLSU+mtSSU+RPB2基因序列进行系统学分析,描述并说明了来自中国的4个新种,即Tomentellaolivaceobasidiosa、T.velutina、T.wumenshanensis和T.yunnanensis。所有新种都可以通过其宏观和解剖特征很好地识别。本文讨论了这四个新物种、系统发生树中的近缘类群以及形态上相似的物种。
{"title":"The diversity and taxonomy of <i>Tomentella</i> (Thelephoraceae, Thelephorales) with descriptions of four new species from Southwestern China.","authors":"Xiaojie Zhang, Fulei Shi, Ke Yang, Changlin Zhao","doi":"10.3897/mycokeys.109.132941","DOIUrl":"https://doi.org/10.3897/mycokeys.109.132941","url":null,"abstract":"<p><p>Taxonomy plays a central role in understanding the diversity of life, translating the products of biological exploration and discovery specimens and observations into systems of names that settle a \"classification home\" to taxa. Up to this point, studies on the taxonomy and phylogeny of the basidiomycetous genus <i>Tomentella</i> stemmed mainly from the temperate to boreal zones of the North Hemisphere, but were scarce in tropical Asia. In this study, four new species, <i>viz. Tomentellaolivaceobasidiosa</i>, <i>T.velutina</i>, <i>T.wumenshanensis</i> and <i>T.yunnanensis</i> from China, are described and illustrated based on the morphological characteristics and molecular phylogenetic analyses, in which the sequences of ITS+nLSU+mtSSU+RPB2 genes were used for the phylogenetic analyses using Maximum Likelihood, Maximum Parsimony and Bayesian Inference methods. All the new species can be well recognised by their macroscopical and anatomical characteristics. The four new species, closely related taxa in the phylogenetic tree and morphologically similar species are discussed.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11422715/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142356512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-16eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.126994
Yanyun Zhang, Lun Wang, Xinmeng Yu, Su Cheng, Junlan Liu, Xinyu Wang
Two new species; Lobothalliacrenulata Lun Wang & Y. Y. Zhang, L.lobulata Lun Wang & Y. Y. Zhang and one new variety; L.subdiffractavar.rimosa Lun Wang & Y. Y. Zhang, are reported from China and described, based on morphological, chemical and molecular characters. Phylogenetic analyses showed that these new taxa form monophyletic groups. Lobothalliacrenulata and L.lobulata, together with L.hydrocharis, L.radiosa and L.recedens, form a well-supported clade, whereas L.subdiffractavar.rimosa is nested within the samples of L.subdiffracta. Lobothalliacrenulata is characterised by its placodioid thallus, thickly pruinose upper surface with a rimose appearance, aspicilioid to lecanorine apothecia with a crenate thalline margin and concave, black and pruinose discs. Lobothallialobulata is characterised by its placodioid thallus, pruinose upper surface with lobules, aspicilioid when immature, lecanorine to zeorine apothecia at maturity and concave to plane, dark brown, shiny and epruinose discs. Lobothalliasubdiffractavar.rimosa is characterised by its areolate thallus, rimose and pruinose upper surface, lecanorine apothecia and slightly concave to plane, black and pruinose discs. Secondary metabolites were not detected in the two new species nor the new variety. A key is provided for the species of Lobothallia in China.
根据形态学、化学和分子特征,报告并描述了来自中国的两个新种:Lobothalliacrenulata Lun Wang & Y. Y. Zhang、L.lobulata Lun Wang & Y. Y. Zhang和一个新变种:L.subdiffractavar.rimosa Lun Wang & Y. Y. Zhang。系统发生分析表明,这些新分类群形成单系群。Lobothalliacrenulata和L.lobulata与L.hydrocharis、L.radiosa和L.recedens形成一个支持良好的支系,而L.subdiffractavar.rimosa则嵌套在L.subdiffracta的样本中。Lobothalliacrenulata 的特征是其胎生的叶片、上表面厚厚的粉霜状突起、具圆齿的叶片边缘和凹陷的黑色粉霜状花盘。Lobothallialobulata 的特征是其胎生叶片,上表面具粉霜,有小裂片,未成熟时为刺状,成熟时为lecanorine 到 zeorine 样皮孔,花盘凹面到平面,黑褐色,有光泽,具粉霜。Lobothalliasubdiffractavar.rimosa的特征是叶状体,上表面有缘毛和丙酮糖,有lecanorine外皮,花盘微凹至平面,黑色和丙酮糖。在这两个新种和新品种中均未检测到次生代谢物。提供了中国 Lobothallia 物种的检索表。
{"title":"Three new taxa of the lichen genus <i>Lobothallia</i> (Megasporaceae, Ascomycota) from China.","authors":"Yanyun Zhang, Lun Wang, Xinmeng Yu, Su Cheng, Junlan Liu, Xinyu Wang","doi":"10.3897/mycokeys.108.126994","DOIUrl":"https://doi.org/10.3897/mycokeys.108.126994","url":null,"abstract":"<p><p>Two new species; <i>Lobothalliacrenulata</i> Lun Wang & Y. Y. Zhang, <i>L.lobulata</i> Lun Wang & Y. Y. Zhang and one new variety; L.subdiffractavar.rimosa Lun Wang & Y. Y. Zhang, are reported from China and described, based on morphological, chemical and molecular characters. Phylogenetic analyses showed that these new taxa form monophyletic groups. <i>Lobothalliacrenulata</i> and <i>L.lobulata</i>, together with <i>L.hydrocharis</i>, <i>L.radiosa</i> and <i>L.recedens</i>, form a well-supported clade, whereas L.subdiffractavar.rimosa is nested within the samples of <i>L.subdiffracta</i>. <i>Lobothalliacrenulata</i> is characterised by its placodioid thallus, thickly pruinose upper surface with a rimose appearance, aspicilioid to lecanorine apothecia with a crenate thalline margin and concave, black and pruinose discs. <i>Lobothallialobulata</i> is characterised by its placodioid thallus, pruinose upper surface with lobules, aspicilioid when immature, lecanorine to zeorine apothecia at maturity and concave to plane, dark brown, shiny and epruinose discs. Lobothalliasubdiffractavar.rimosa is characterised by its areolate thallus, rimose and pruinose upper surface, lecanorine apothecia and slightly concave to plane, black and pruinose discs. Secondary metabolites were not detected in the two new species nor the new variety. A key is provided for the species of <i>Lobothallia</i> in China.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11420544/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142356511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}