Pub Date : 2024-08-30eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.127734
Lin Zhang, Lili Zhao, Chen Liang, Luhan Yu, Ying Zhang
Colletotrichum species can function as plant pathogens, saprobes or endophytes on a wide variety of plant hosts and are considered amongst the ten most significant genera of plant pathogens globally. China contributes almost half the walnut production in the world. However, Colletotrichum species occurring on walnut remain largely unresolved in China. To explore the Colletotrichum species found on walnut in China, 470 walnut fruit or leaf samples with anthracnose were collected from 14 main walnut-producing regions across seven provinces. A total of 165 Colletotrichum strains were isolated from these samples. The Colletotrichum isolates were identified, based on morphological characteristics and sequence analyses of ACT, CHS-1, GAPDH, ITS and TUB2. Twelve species, including 11 known Colletotrichum species (C.boninense, C.citrulli, C.fioriniae, C.fructicola, C.godetiae, C.juglandicola, C.karsti, C.mengyinense, C.pandanicola, C.peakense and C.siamense) and a novel species (C.chinensissp. nov.) were identified. The species distribution revealed regional prevalence as follows: C.mengyinense was the most dominant species in Gansu, C.mengyinense and C.siamense in Shandong, C.chinensis in Beijing, C.pandanicola in Shaanxi and C.godetiae in Yunnan. Colletotrichumsiamense was the sole species isolated in Sichuan and Xinjiang Provinces. Koch's postulates were fulfilled, demonstrating that all 12 species cause anthracnose on walnut. This is the first report of C.boninense, C.citrulli and C.karsti as pathogens of walnut anthracnose worldwide.
{"title":"<i>Colletotrichum</i> species (Glomerellales, Glomerellaceae) causing walnut anthracnose in China.","authors":"Lin Zhang, Lili Zhao, Chen Liang, Luhan Yu, Ying Zhang","doi":"10.3897/mycokeys.108.127734","DOIUrl":"10.3897/mycokeys.108.127734","url":null,"abstract":"<p><p><i>Colletotrichum</i> species can function as plant pathogens, saprobes or endophytes on a wide variety of plant hosts and are considered amongst the ten most significant genera of plant pathogens globally. China contributes almost half the walnut production in the world. However, <i>Colletotrichum</i> species occurring on walnut remain largely unresolved in China. To explore the <i>Colletotrichum</i> species found on walnut in China, 470 walnut fruit or leaf samples with anthracnose were collected from 14 main walnut-producing regions across seven provinces. A total of 165 <i>Colletotrichum</i> strains were isolated from these samples. The <i>Colletotrichum</i> isolates were identified, based on morphological characteristics and sequence analyses of <i>ACT</i>, <i>CHS-1</i>, <i>GAPDH</i>, ITS and <i>TUB2</i>. Twelve species, including 11 known <i>Colletotrichum</i> species (<i>C.boninense</i>, <i>C.citrulli</i>, <i>C.fioriniae</i>, <i>C.fructicola</i>, <i>C.godetiae</i>, <i>C.juglandicola</i>, <i>C.karsti</i>, <i>C.mengyinense</i>, <i>C.pandanicola</i>, <i>C.peakense</i> and <i>C.siamense</i>) and a novel species (<i>C.chinensis</i> <b>sp. nov.</b>) were identified. The species distribution revealed regional prevalence as follows: <i>C.mengyinense</i> was the most dominant species in Gansu, <i>C.mengyinense</i> and <i>C.siamense</i> in Shandong, <i>C.chinensis</i> in Beijing, <i>C.pandanicola</i> in Shaanxi and <i>C.godetiae</i> in Yunnan. <i>Colletotrichumsiamense</i> was the sole species isolated in Sichuan and Xinjiang Provinces. Koch's postulates were fulfilled, demonstrating that all 12 species cause anthracnose on walnut. This is the first report of <i>C.boninense</i>, <i>C.citrulli</i> and <i>C.karsti</i> as pathogens of walnut anthracnose worldwide.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11380052/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142156434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-22eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.128033
Marcin Piątek, Monika Stryjak-Bogacka, Paweł Czachura
The widely treated order Capnodiales is one of the most important orders in the class Dothideomycetes. Recently, the order Capnodiales s. lat. was reassessed and split into seven orders (Capnodiales s. str., Cladosporiales, Comminutisporales, Mycosphaerellales, Neophaeothecales, Phaeothecales and Racodiales) based on multi-locus phylogeny, morphology and life strategies. In this study, two Arthrocatena strains isolated from sooty mould communities on the leaves of Tiliacordata and needles of Pinusnigra in southern Poland were analyzed. Multi-locus phylogenetic analyses (ITS-LSU-SSU-rpb2-tef1) along with morphological examination showed that they belong to Capnobotryellaantalyensis, which represents a sister taxon to Arthrocatenatenebrosa. Capnobotryellaantalyensis is a rock-inhabiting fungus described from Turkey. The following new combination is proposed: Arthrocatenaantalyensis. Phylogenetic analyses also showed that Arthrocatena and related genus Hyphoconis, both known previously only from rocks, form a sister lineage to orders Cladosporiales and Comminutisporales. The new order Arthrocatenales and new family Arthrocatenaceae are proposed to this clade. Representatives of this order are extremophilic fungi that live on rocks and in sooty mould communities.
{"title":"Arthrocatenales, a new order of extremophilic fungi in the Dothideomycetes.","authors":"Marcin Piątek, Monika Stryjak-Bogacka, Paweł Czachura","doi":"10.3897/mycokeys.108.128033","DOIUrl":"10.3897/mycokeys.108.128033","url":null,"abstract":"<p><p>The widely treated order Capnodiales is one of the most important orders in the class Dothideomycetes. Recently, the order Capnodiales s. lat. was reassessed and split into seven orders (Capnodiales s. str., Cladosporiales, Comminutisporales, Mycosphaerellales, Neophaeothecales, Phaeothecales and Racodiales) based on multi-locus phylogeny, morphology and life strategies. In this study, two <i>Arthrocatena</i> strains isolated from sooty mould communities on the leaves of <i>Tiliacordata</i> and needles of <i>Pinusnigra</i> in southern Poland were analyzed. Multi-locus phylogenetic analyses (ITS-LSU-SSU-<i>rpb2</i>-<i>tef1</i>) along with morphological examination showed that they belong to <i>Capnobotryellaantalyensis</i>, which represents a sister taxon to <i>Arthrocatenatenebrosa</i>. <i>Capnobotryellaantalyensis</i> is a rock-inhabiting fungus described from Turkey. The following new combination is proposed: <i>Arthrocatenaantalyensis</i>. Phylogenetic analyses also showed that <i>Arthrocatena</i> and related genus <i>Hyphoconis</i>, both known previously only from rocks, form a sister lineage to orders Cladosporiales and Comminutisporales. The new order Arthrocatenales and new family Arthrocatenaceae are proposed to this clade. Representatives of this order are extremophilic fungi that live on rocks and in sooty mould communities.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11362667/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142113736","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-22eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.127560
Guang-Cong Ren, Saowaluck Tibpromma, Kai-Xuan Dong, Chen-Xi Gao, Chao-Shan Zhang, Samantha C Karunarathna, Abdallah M Elgorban, Heng Gui
During a survey of the diversity of lignicolous fungi in Yunnan Province, China, we collected and identified five microfungi species from dead woody litters of Castanopsis trees in terrestrial habitats. Through both morphological comparisons and phylogenetic analyses of multi-gene sequences, we identified two taxa as new species and three collections as new host records within Pleosporales. Pseudolophiostomalincangensesp. nov. is introduced as a sexual morph in Lophiostomataceae, Pleopunctumbaoshanensesp. nov. is introduced as a hyphomycetous fungi in Phaeoseptaceae, and Paraphomaaquatica as a first report of sexual morph in Paraphoma. In addition, Occultibambusakunmingensis and Pleopunctummegalosporum were isolated for the first time from the dead twigs of Castanopsisdelavayi and C.calathiformis, respectively. Comprehensive morphological descriptions, illustrations, and phylogenetic analysis results are provided for the above-mentioned species.
{"title":"Unveiling fungi associated with <i>Castanopsis</i> woody litter in Yunnan Province, China: Insights into Pleosporales (Dothideomycetes) species.","authors":"Guang-Cong Ren, Saowaluck Tibpromma, Kai-Xuan Dong, Chen-Xi Gao, Chao-Shan Zhang, Samantha C Karunarathna, Abdallah M Elgorban, Heng Gui","doi":"10.3897/mycokeys.108.127560","DOIUrl":"10.3897/mycokeys.108.127560","url":null,"abstract":"<p><p>During a survey of the diversity of lignicolous fungi in Yunnan Province, China, we collected and identified five microfungi species from dead woody litters of <i>Castanopsis</i> trees in terrestrial habitats. Through both morphological comparisons and phylogenetic analyses of multi-gene sequences, we identified two taxa as new species and three collections as new host records within Pleosporales. <i>Pseudolophiostomalincangense</i> <b>sp. nov.</b> is introduced as a sexual morph in Lophiostomataceae, <i>Pleopunctumbaoshanense</i> <b>sp. nov.</b> is introduced as a hyphomycetous fungi in Phaeoseptaceae, and <i>Paraphomaaquatica</i> as a first report of sexual morph in <i>Paraphoma</i>. In addition, <i>Occultibambusakunmingensis</i> and <i>Pleopunctummegalosporum</i> were isolated for the first time from the dead twigs of <i>Castanopsisdelavayi</i> and <i>C.calathiformis</i>, respectively. Comprehensive morphological descriptions, illustrations, and phylogenetic analysis results are provided for the above-mentioned species.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11362665/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142113739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Clavulina possesses important ecological and economic value and has attracted extensive attention from mycologists. Macrofungal diversity is high in China, but Clavulina species have not been thoroughly studied. In this study, based on morphological evidence and phylogenetic analyses of the nucleotide sequences of three loci (nrITS, nrLSU, and rpb2), three new species of Clavulina from North China were identified. Morphologically, Clavulinachengdeensis is characterized by its white to dirty white basidiomata with somewhat pale orange tips and somewhat wrinkled hymenium. Clavulinagriseoviolacea is characterized by its gray to dark grayish violet basidiomata, with a sometimes-white stipe base, monopodial or irregularly polychotomous toward branch apices. Clavulinapallida is characterized by its white to pale cream white basidiomata with somewhat orange tips. Phylogenetically, the three new species form three independent branches with high support values in the phylogenetic tree.
{"title":"Three new species of the genus <i>Clavulina</i> (Hydnaceae, Cantharellales) from North China based on morphological and phylogenetic analysis.","authors":"Yue Gao, Xin Tong, Hao Zhou, Hai-Qi Wang, Cheng Li, Cheng-Lin Hou","doi":"10.3897/mycokeys.108.124004","DOIUrl":"10.3897/mycokeys.108.124004","url":null,"abstract":"<p><p><i>Clavulina</i> possesses important ecological and economic value and has attracted extensive attention from mycologists. Macrofungal diversity is high in China, but <i>Clavulina</i> species have not been thoroughly studied. In this study, based on morphological evidence and phylogenetic analyses of the nucleotide sequences of three loci (nrITS, nrLSU, and <i>rpb2</i>), three new species of <i>Clavulina</i> from North China were identified. Morphologically, <i>Clavulinachengdeensis</i> is characterized by its white to dirty white basidiomata with somewhat pale orange tips and somewhat wrinkled hymenium. <i>Clavulinagriseoviolacea</i> is characterized by its gray to dark grayish violet basidiomata, with a sometimes-white stipe base, monopodial or irregularly polychotomous toward branch apices. <i>Clavulinapallida</i> is characterized by its white to pale cream white basidiomata with somewhat orange tips. Phylogenetically, the three new species form three independent branches with high support values in the phylogenetic tree.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11362664/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142113738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Three new species of Phaeoclavulina from China are described: Phaeoclavulinabicolor, P.echinoflava, and P.jilinensis. Recognition of the new species is supported by morphological and molecular evidence. Phylogenetic analyses of concatenated ITS1-5.8S-ITS2 and nuclear large subunit sequences support the establishment of the new species and their placement within the Phaeoclavulina clade. A key to the known Phaeoclavulina species in China is provided.
{"title":"Three new ramarioid species of <i>Phaeoclavulina</i> (Gomphaceae, Gomphales) from China.","authors":"Peng-Tao Deng, Wen-Hao Liu, Zai-Wei Ge, Ping Zhang","doi":"10.3897/mycokeys.108.128716","DOIUrl":"10.3897/mycokeys.108.128716","url":null,"abstract":"<p><p>Three new species of <i>Phaeoclavulina</i> from China are described: <i>Phaeoclavulinabicolor</i>, <i>P.echinoflava</i>, and <i>P.jilinensis</i>. Recognition of the new species is supported by morphological and molecular evidence. Phylogenetic analyses of concatenated ITS1-5.8S-ITS2 and nuclear large subunit sequences support the establishment of the new species and their placement within the <i>Phaeoclavulina</i> clade. A key to the known <i>Phaeoclavulina</i> species in China is provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11358615/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142113737","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
[This corrects the article DOI: 10.3897/mycokeys.103.107935.].
[此处更正了文章 DOI:10.3897/mycokeys.103.107935]。
{"title":"Erratum: Corrigendum: Vadthanarat S, Raghoonundon B, Lumyong S, Raspé O (2024) <i>Rostrupomyces</i>, a new genus to accommodate <i>Xerocomussisongkhramensis</i>, and a new <i>Hemileccinum</i> species (Xerocomoideae, Boletaceae) from Thailand. MycoKeys 103: 129-165. https://doi.org/10.3897/mycokeys.103.107935.","authors":"Santhiti Vadthanarat, Bhavesh Raghoonundon, Saisamorn Lumyong, Olivier Raspé","doi":"10.3897/mycokeys.107.132226","DOIUrl":"https://doi.org/10.3897/mycokeys.107.132226","url":null,"abstract":"<p><p>[This corrects the article DOI: 10.3897/mycokeys.103.107935.].</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11358706/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142113735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Three new species belonging to Basidiomycota from southwestern China are described based on morphological and molecular data. Campanophyllummicrosporum is morphologically characterized by dorsally pseudostipitate, pale orange to brownish orange pileus, excentric to lateral pseudostipe, crowded lamellae, cylindrical-ellipsoid basidiospores 3.0-4.2 × 1.7-2.2 µm, narrowly clavate to clavate basidia 14.5-23.0 × 3.0-4.2 µm, and cylindrical to clavate cheilocystidia 22.0-55.0 × 5.0-10.8 µm. Caloceramultiramosa is morphologically characterized by stipitate, yellowish to orange, dendroid, and dichotomously branched basidiomata, cylindrical to clavate basidia 36.5-52.5 × 3.8-6.1 µm, navicular or reniform, 1-5-septate mature basidiospores 10.4-16.7 × 5.2-7.4 µm. Dacrymycesnaematelioides is morphologically characterized by stipitate and cerebriform, orange to light brown basidiomata, cylindrical to clavate, smooth or roughened basidia 38.5-79.5 × 6.5-10.6 µm, broadly and elliptic-fusiform, 7-septate mature basidiospores 18.5-28.6 × 8.9-13.8 µm. These three new species are supported by the phylogenetic analyses using maximum likelihood (ML) and Bayesian inference (BI) analyses with combined nuclear ribosomal DNA (rDNA) internal transcribed spacer (ITS) and large ribosomal subunit (LSU) sequences. Full descriptions and photographs of these new species are provided.
{"title":"<i>Campanophyllummicrosporum</i> (Agaricales, Agaricomycetes), <i>Caloceramultiramosa</i>, and <i>Dacrymycesnaematelioides</i> (Dacrymycetales, Dacrymycetes), three new species from Yunnan Province, southwestern China.","authors":"Yuan-Hao Ma, Ping Liu, Hong-Mei Chai, Min Zeng, Yi-Yun Guo, Wei-Min Chen, Yong-Chang Zhao","doi":"10.3897/mycokeys.107.125571","DOIUrl":"10.3897/mycokeys.107.125571","url":null,"abstract":"<p><p>Three new species belonging to Basidiomycota from southwestern China are described based on morphological and molecular data. <i>Campanophyllummicrosporum</i> is morphologically characterized by dorsally pseudostipitate, pale orange to brownish orange pileus, excentric to lateral pseudostipe, crowded lamellae, cylindrical-ellipsoid basidiospores 3.0-4.2 × 1.7-2.2 µm, narrowly clavate to clavate basidia 14.5-23.0 × 3.0-4.2 µm, and cylindrical to clavate cheilocystidia 22.0-55.0 × 5.0-10.8 µm. <i>Caloceramultiramosa</i> is morphologically characterized by stipitate, yellowish to orange, dendroid, and dichotomously branched basidiomata, cylindrical to clavate basidia 36.5-52.5 × 3.8-6.1 µm, navicular or reniform, 1-5-septate mature basidiospores 10.4-16.7 × 5.2-7.4 µm. <i>Dacrymycesnaematelioides</i> is morphologically characterized by stipitate and cerebriform, orange to light brown basidiomata, cylindrical to clavate, smooth or roughened basidia 38.5-79.5 × 6.5-10.6 µm, broadly and elliptic-fusiform, 7-septate mature basidiospores 18.5-28.6 × 8.9-13.8 µm. These three new species are supported by the phylogenetic analyses using maximum likelihood (ML) and Bayesian inference (BI) analyses with combined nuclear ribosomal DNA (rDNA) internal transcribed spacer (ITS) and large ribosomal subunit (LSU) sequences. Full descriptions and photographs of these new species are provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11336384/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142019253","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-09DOI: 10.3897/mycokeys.107.125549
L. Tedersoo, F. Magurno, Saad Alkahtani, Vladimir Mikryukov
Arbuscular mycorrhizal (AM) fungi - Glomeromycota and Endogonomycetes - comprise multiple species and higher-level taxa that have remained undescribed. We propose a mixed morphology- and DNA-based classification framework to promote taxonomic communication and shed light into the phylogenetic structure of these ecologically essential fungi. Based on eDNA samples and long reads as type materials, we describe 15 new species and corresponding genera (Pseudoentrophospora kesseensis, Hoforsa rebekkae, Kahvena rebeccae, Kelottijaervia shannonae, Kungsaengena shadiae, Langduoa dianae, Lehetua indrekii, Lokruma stenii, Moostea stephanieae, Nikkaluokta mahdiehiae, Parnigua craigii, Riederberga sylviae, Ruua coralieae, Tammsaarea vivikae and Unemaeea nathalieae), the genus Parvocarpum as well as 19 families (Pseudoentrophosporaceae, Hoforsaceae, Kahvenaceae, Kelottijaerviaceae, Kungsaengenaceae, Langduoaceae, Lehetuaceae, Lokrumaceae, Moosteaceae, Nikkaluoktaceae, Parniguaceae, Riederbergaceae, Ruuaceae, Tammsaareaceae, Unemaeeaceae, Bifigurataceae, Planticonsortiaceae, Jimgerdemanniaceae and Vinositunicaceae) and 17 orders (Hoforsales, Kahvenales, Kelottijaerviales, Kungsaengenales, Langduoales, Lehetuales, Lokrumales, Moosteales, Nikkaluoktales, Parniguales, Riederbergales, Ruuales, Tammsaareales, Unemaeeales, Bifiguratales and Densosporales), and propose six combinations (Diversispora bareae, Diversispora nevadensis, Fuscutata cerradensis, Fuscutata reticulata, Viscospora deserticola and Parvocarpum badium) based on phylogenetic evidence. We highlight further knowledge gaps in the phylogenetic structure of AM fungi and propose an alphanumeric coding system for preliminary communication and reference-based eDNA quality-filtering of the remaining undescribed genus- and family-level groups. Using AM fungi as examples, we hope to offer a sound, mixed framework for classification to boost research in the alpha taxonomy of fungi, especially the “dark matter fungi”.
{"title":"Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class Endogonomycetes)","authors":"L. Tedersoo, F. Magurno, Saad Alkahtani, Vladimir Mikryukov","doi":"10.3897/mycokeys.107.125549","DOIUrl":"https://doi.org/10.3897/mycokeys.107.125549","url":null,"abstract":"Arbuscular mycorrhizal (AM) fungi - Glomeromycota and Endogonomycetes - comprise multiple species and higher-level taxa that have remained undescribed. We propose a mixed morphology- and DNA-based classification framework to promote taxonomic communication and shed light into the phylogenetic structure of these ecologically essential fungi. Based on eDNA samples and long reads as type materials, we describe 15 new species and corresponding genera (Pseudoentrophospora kesseensis, Hoforsa rebekkae, Kahvena rebeccae, Kelottijaervia shannonae, Kungsaengena shadiae, Langduoa dianae, Lehetua indrekii, Lokruma stenii, Moostea stephanieae, Nikkaluokta mahdiehiae, Parnigua craigii, Riederberga sylviae, Ruua coralieae, Tammsaarea vivikae and Unemaeea nathalieae), the genus Parvocarpum as well as 19 families (Pseudoentrophosporaceae, Hoforsaceae, Kahvenaceae, Kelottijaerviaceae, Kungsaengenaceae, Langduoaceae, Lehetuaceae, Lokrumaceae, Moosteaceae, Nikkaluoktaceae, Parniguaceae, Riederbergaceae, Ruuaceae, Tammsaareaceae, Unemaeeaceae, Bifigurataceae, Planticonsortiaceae, Jimgerdemanniaceae and Vinositunicaceae) and 17 orders (Hoforsales, Kahvenales, Kelottijaerviales, Kungsaengenales, Langduoales, Lehetuales, Lokrumales, Moosteales, Nikkaluoktales, Parniguales, Riederbergales, Ruuales, Tammsaareales, Unemaeeales, Bifiguratales and Densosporales), and propose six combinations (Diversispora bareae, Diversispora nevadensis, Fuscutata cerradensis, Fuscutata reticulata, Viscospora deserticola and Parvocarpum badium) based on phylogenetic evidence. We highlight further knowledge gaps in the phylogenetic structure of AM fungi and propose an alphanumeric coding system for preliminary communication and reference-based eDNA quality-filtering of the remaining undescribed genus- and family-level groups. Using AM fungi as examples, we hope to offer a sound, mixed framework for classification to boost research in the alpha taxonomy of fungi, especially the “dark matter fungi”.","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141923992","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cyanosporus is a cosmopolitan genus characterized by effused-reflexed to pileate basidiomata with a bluish tint and allantoid to cylindrical basidiospores which are negative to weakly positive in Melzer’s reagent and Cotton Blue, causing a brown rot. Three new species of Cyanosporus, namely, C. linzhiensis, C. miscanthi and C. tabuliformis are described and illustrated. Phylogenies on Cyanosporus are reconstructed with seven loci DNA sequences including ITS, nLSU, nSSU, mtSSU, RPB1, RPB2 and TEF1 based on phylogenetic analyses combined with morphological examination. The description for the new species is given. The main morphological characteristics of all 38 accepted species in Cyanosporus are summarized.
蓝孢属(Cyanosporus)是一个世界性的属,其特征是基部有流出的反折至绒毛状的基生菌体,呈蓝色,基部有尿囊状至圆柱状的基生孢子,在梅尔泽试剂和棉蓝试剂中呈阴性至弱阳性,可引起褐腐病。文中描述并说明了三个新的青孢菌种,即 C. linzhiensis、C. miscanthi 和 C. tabuliformis。根据系统发育分析和形态学检查,利用七个位点的 DNA 序列(包括 ITS、nLSU、nSSU、mtSSU、RPB1、RPB2 和 TEF1)重建了青孢菌的系统发育。对新物种进行了描述。总结了青孢属所有 38 个公认种的主要形态特征。
{"title":"Three new species of Cyanosporus (Polyporales, Basidiomycota) from China","authors":"Chao-Ge Wang, Shun Liu, M. Ghobad-Nejhad, Hong-Gao Liu, Yu-Cheng Dai, Yuan Yuan","doi":"10.3897/mycokeys.107.126139","DOIUrl":"https://doi.org/10.3897/mycokeys.107.126139","url":null,"abstract":"Cyanosporus is a cosmopolitan genus characterized by effused-reflexed to pileate basidiomata with a bluish tint and allantoid to cylindrical basidiospores which are negative to weakly positive in Melzer’s reagent and Cotton Blue, causing a brown rot. Three new species of Cyanosporus, namely, C. linzhiensis, C. miscanthi and C. tabuliformis are described and illustrated. Phylogenies on Cyanosporus are reconstructed with seven loci DNA sequences including ITS, nLSU, nSSU, mtSSU, RPB1, RPB2 and TEF1 based on phylogenetic analyses combined with morphological examination. The description for the new species is given. The main morphological characteristics of all 38 accepted species in Cyanosporus are summarized.","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141924393","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-07eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.107.127907
Song-Ming Tang, Santhiti Vadthanarat, Bhavesh Raghoonundon, Zong-Long Luo, Xin-Yu Zhu, Feng-Ming Yu, Jun He, Shu-Hong Li
Two new species Laccariapseudoalba and L.subroseoalbescens are described and illustrated, based on morphological characteristics and molecular phylogenetic analysis. Two new records, Laccariaumbilicata and L.yunnanensis from Thailand, are also reported. Laccariasubroseoalbescens is characterized by small basidiomata, stipe equal with an enlarged base, and nearly subclavate, pale pink to light orange. Laccariapseudoalba is characterized by pale orange to orange white pileus, has umbo when young on the pileus, and fistulose stipe of the pale to pastel red color. Phylogenetic analysis based on sequence data from rDNA internal transcribed spacer ITS1-5.8S-ITS2 rDNA (ITS), nuc 28S rDNA (28S), RNA polymerase II subunit 2 (rpb2), and translation elongation factor 1-α (tef1-α) are provided as further evidence. Molecular analysis confirms the phylogenetic positions of the two new species and two new records. The differences in characteristics of these two new species and closely related species are discussed herein.
{"title":"New species and new records of <i>Laccaria</i> (Agaricales, Basidiomycota) from Northern Thailand.","authors":"Song-Ming Tang, Santhiti Vadthanarat, Bhavesh Raghoonundon, Zong-Long Luo, Xin-Yu Zhu, Feng-Ming Yu, Jun He, Shu-Hong Li","doi":"10.3897/mycokeys.107.127907","DOIUrl":"10.3897/mycokeys.107.127907","url":null,"abstract":"<p><p>Two new species <i>Laccariapseudoalba</i> and <i>L.subroseoalbescens</i> are described and illustrated, based on morphological characteristics and molecular phylogenetic analysis. Two new records, <i>Laccariaumbilicata</i> and <i>L.yunnanensis</i> from Thailand, are also reported. <i>Laccariasubroseoalbescens</i> is characterized by small basidiomata, stipe equal with an enlarged base, and nearly subclavate, pale pink to light orange. <i>Laccariapseudoalba</i> is characterized by pale orange to orange white pileus, has umbo when young on the pileus, and fistulose stipe of the pale to pastel red color. Phylogenetic analysis based on sequence data from rDNA internal transcribed spacer ITS1-5.8S-ITS2 rDNA (ITS), nuc 28S rDNA (28S), RNA polymerase II subunit 2 (rpb2), and translation elongation factor 1-α (tef1-α) are provided as further evidence. Molecular analysis confirms the phylogenetic positions of the two new species and two new records. The differences in characteristics of these two new species and closely related species are discussed herein.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11336393/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142019255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}