Pub Date : 2024-09-13eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.128983
Yaquan Zhu, Lei Ma, Han Xue, Yong Li, Ning Jiang
Diaporthe species are known as endophytes, saprobes and pathogens infecting a wide range of plants and resulting in important crop diseases. In the present study, four strains of Diaporthe were obtained from diseased leaves of Bauhiniavariegata in Guangdong Province, China. Phylogenetic analyses were conducted to identify these strains using five gene regions: internal transcribed spacer (ITS), calmodulin (cal), histone H3 (his3), translation elongation factor 1-α (tef1) and β-tubulin (tub2). The results combined with morphology revealed two new species of Diaporthe named D.bauhiniicola in D.arecae species complex and D.guangzhouensis in D.sojae species complex.
{"title":"New species of <i>Diaporthe</i> (Diaporthaceae, Diaporthales) from <i>Bauhiniavariegata</i> in China.","authors":"Yaquan Zhu, Lei Ma, Han Xue, Yong Li, Ning Jiang","doi":"10.3897/mycokeys.108.128983","DOIUrl":"10.3897/mycokeys.108.128983","url":null,"abstract":"<p><p><i>Diaporthe</i> species are known as endophytes, saprobes and pathogens infecting a wide range of plants and resulting in important crop diseases. In the present study, four strains of <i>Diaporthe</i> were obtained from diseased leaves of <i>Bauhiniavariegata</i> in Guangdong Province, China. Phylogenetic analyses were conducted to identify these strains using five gene regions: internal transcribed spacer (ITS), calmodulin (<i>cal</i>), histone H3 (<i>his3</i>), translation elongation factor 1-α (<i>tef1</i>) and β-tubulin (<i>tub2</i>). The results combined with morphology revealed two new species of <i>Diaporthe</i> named <i>D.bauhiniicola</i> in <i>D.arecae</i> species complex and <i>D.guangzhouensis</i> in <i>D.sojae</i> species complex.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11415621/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299105","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-13eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.128889
Yinru Xiong, Kevin D Hyde, Li Lu, Dulanjalee L Harishchandra, Ausana Mapook, Biao Xu, Fatimah Alotibi, Ishara S Manawasinghe
Asexual species of Tubeufiaceae are characterised as helicosporous hyphomycetes and are abundantly discovered in tropical and subtropical regions. The present study collected helicosporous fungal samples from rotting tissues of Caryotamitis, Elaeisguineensis and E.oleifera in Xishuangbanna, Yunan Province, China. Fungal isolates were identified, based on the morphological characteristics and multi-gene phylogeny with DNA sequence data of the internal transcribed spacer (ITS), part of the large subunit nuclear rRNA gene (LSU), translation elongation factor 1-alpha gene (tef 1-α) and RNA polymerase II second largest subunit gene (rpb2). Herein, we introduce three new species viz. Helicomaoleifera, Neohelicosporiumguineensis and N.xishuangbannaensis. In addition, we introduce two new host records of Helicomaguttulatum and H.rufum on Caryotamitis. The illustrations of all identified species, detailed descriptions and in-depth phylogenetic analyses are provided. Our results add new knowledge of fungal species associated with palm hosts in southern China. Moreover, our data will contribute to the biodiversity of fungi in tropical China.
管壳菌科(Tubeufiaceae)的无性繁殖种被定性为半知菌(helicosporous hyphomycetes),在热带和亚热带地区被大量发现。本研究从中国云南省西双版纳的 Caryotamitis、Elaeisguineensis 和 E.oleifera 腐烂组织中采集了单孢真菌样本。根据形态特征和多基因系统发育(包括内部转录间隔序列(ITS)、部分核 rRNA 大亚基基因(LSU)、翻译延伸因子 1-α基因(tef 1-α)和 RNA 聚合酶 II 第二大亚基基因(rpb2)的 DNA 序列数据),对真菌分离物进行了鉴定。在此,我们介绍了三个新物种,即Helicomaoleifera、Neohelicosporiumguineensis和N.xishuangbannaensis。此外,我们还介绍了Caryotamitis上Helicomaguttulatum和H.rufum的两个新宿主记录。我们提供了所有已鉴定物种的插图、详细描述和深入的系统发育分析。我们的研究结果增加了华南地区棕榈寄主相关真菌物种的新知识。此外,我们的数据还将对中国热带地区真菌的生物多样性做出贡献。
{"title":"Novel <i>Helicoma</i> and <i>Neohelicosporium</i> (Tubeufiaceae, Tubeufiales) species and two new host records of <i>Helicoma</i> on tropical palms (Arecaceae) from China.","authors":"Yinru Xiong, Kevin D Hyde, Li Lu, Dulanjalee L Harishchandra, Ausana Mapook, Biao Xu, Fatimah Alotibi, Ishara S Manawasinghe","doi":"10.3897/mycokeys.108.128889","DOIUrl":"10.3897/mycokeys.108.128889","url":null,"abstract":"<p><p>Asexual species of Tubeufiaceae are characterised as helicosporous hyphomycetes and are abundantly discovered in tropical and subtropical regions. The present study collected helicosporous fungal samples from rotting tissues of <i>Caryotamitis</i>, <i>Elaeisguineensis</i> and <i>E.oleifera</i> in Xishuangbanna, Yunan Province, China. Fungal isolates were identified, based on the morphological characteristics and multi-gene phylogeny with DNA sequence data of the internal transcribed spacer (ITS), part of the large subunit nuclear rRNA gene (LSU), translation elongation factor 1-alpha gene (<i>tef</i> 1-<i>α</i>) and RNA polymerase II second largest subunit gene (<i>rpb</i>2). Herein, we introduce three new species viz. <i>Helicomaoleifera</i>, <i>Neohelicosporiumguineensis</i> and <i>N.xishuangbannaensis</i>. In addition, we introduce two new host records of <i>Helicomaguttulatum</i> and <i>H.rufum</i> on <i>Caryotamitis</i>. The illustrations of all identified species, detailed descriptions and in-depth phylogenetic analyses are provided. Our results add new knowledge of fungal species associated with palm hosts in southern China. Moreover, our data will contribute to the biodiversity of fungi in tropical China.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11415625/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-13eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.128197
Ning Jiang, Xiaojie Qi, Baoxin Qi, Fang Cai, Han Xue, Yong Li
The genus Dendrostoma is known to inhabit tree barks associated with branch canker diseases in China and several countries of Europe. Previous studies indicated that species of Dendrostoma prefer inhabiting fagaceous hosts, especially species of Castanea. In the present study, we obtained four isolates from cankered branches of Chinese chestnut (C.mollissima) in Rizhao City, Shandong Province, China. Morphological comparisons and phylogenetical analyses of a combined ITS-tef1-rpb2 sequence matrix were conducted, which revealed two new species named Dendrostomarizhaoensesp. nov. and D.tianiisp. nov. The new taxa are compared with other Dendrostoma species and comprehensive descriptions and illustrations are provided herein.
{"title":"Two new species of <i>Dendrostoma</i> (Erythrogloeaceae, Diaporthales) associated with <i>Castaneamollissima</i> canker disease in China.","authors":"Ning Jiang, Xiaojie Qi, Baoxin Qi, Fang Cai, Han Xue, Yong Li","doi":"10.3897/mycokeys.108.128197","DOIUrl":"10.3897/mycokeys.108.128197","url":null,"abstract":"<p><p>The genus <i>Dendrostoma</i> is known to inhabit tree barks associated with branch canker diseases in China and several countries of Europe. Previous studies indicated that species of <i>Dendrostoma</i> prefer inhabiting fagaceous hosts, especially species of <i>Castanea</i>. In the present study, we obtained four isolates from cankered branches of Chinese chestnut (<i>C.mollissima</i>) in Rizhao City, Shandong Province, China. Morphological comparisons and phylogenetical analyses of a combined ITS-<i>tef1</i>-<i>rpb2</i> sequence matrix were conducted, which revealed two new species named <i>Dendrostomarizhaoense</i> <b>sp. nov</b>. and <i>D.tianii</i> <b>sp. nov.</b> The new taxa are compared with other <i>Dendrostoma</i> species and comprehensive descriptions and illustrations are provided herein.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11415624/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299109","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-10eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.130098
Hua Zheng, Xinwen Dai, Haiyan Li, Zefen Yu
Nectriaceae is a highly diverse family, and members have a worldwide distribution, particularly in warm temperate to tropical regions. During the survey of fungal diversity in different habitats in Yunnan province, China, two new species isolated from soil and air respectively, namely Atractiumyunnanensesp. nov. and Nalanthamalaxishuangbannaensissp. nov., were proposed based on morphological comparisons and the multi-gene phylogenetic analyses of combined ITS, LSU, rpb2, and tub2 sequence data. Phylogenetically, both species clustered in a monophyletic clade within Nectriaceae with strong support. A.yunnanense is characterized by synnematous conidiophores, pale olivaceous-green, clavate to oblong-ellipsoidal, multi-septate conidia, and pale olivaceous-green chlamydospores. N.xishuangbannaensis has acremonium-like or penicillium-like conidiophores and either obovate or ellipsoidal, cylindrical or fusiform conidia. Full descriptions, illustrations, and a phylogenetic tree showing the phylogenetic position of the two new species were provided.
{"title":"Two new species of Nectriaceae (Hypocreales, Sordariomycetes) from Yunnan, China.","authors":"Hua Zheng, Xinwen Dai, Haiyan Li, Zefen Yu","doi":"10.3897/mycokeys.108.130098","DOIUrl":"https://doi.org/10.3897/mycokeys.108.130098","url":null,"abstract":"<p><p>Nectriaceae is a highly diverse family, and members have a worldwide distribution, particularly in warm temperate to tropical regions. During the survey of fungal diversity in different habitats in Yunnan province, China, two new species isolated from soil and air respectively, namely <i>Atractiumyunnanense</i> <b>sp. nov.</b> and <i>Nalanthamalaxishuangbannaensis</i> <b>sp. nov.</b>, were proposed based on morphological comparisons and the multi-gene phylogenetic analyses of combined ITS, LSU, <i>rpb</i>2, and <i>tub</i>2 sequence data. Phylogenetically, both species clustered in a monophyletic clade within Nectriaceae with strong support. <i>A.yunnanense</i> is characterized by synnematous conidiophores, pale olivaceous-green, clavate to oblong-ellipsoidal, multi-septate conidia, and pale olivaceous-green chlamydospores. <i>N.xishuangbannaensis</i> has acremonium-like or penicillium-like conidiophores and either obovate or ellipsoidal, cylindrical or fusiform conidia. Full descriptions, illustrations, and a phylogenetic tree showing the phylogenetic position of the two new species were provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11408876/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299111","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-10eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.131983
Wei-Nan Hou, Burenbaatar Ganbaatar, Tolgor Bau
Metacampanella is an important genus in the Marasmiaceae family. We collected specimens during our investigations in China and Mongolia. Through morphological and molecular phylogenetic analyses, we identified two new species of this genus: Metacampanellasubtricolor and Metacampanellacoprophila. In addition, we identified Metacampanellatricolor as a novel combination. Molecular systematic studies support these results. Illustrated descriptions, taxonomic discussions, and keys to the genus are provided.
{"title":"Two new species of <i>Metacampanella</i> (Agaricales, Marasmiaceae) from China and Mongolia.","authors":"Wei-Nan Hou, Burenbaatar Ganbaatar, Tolgor Bau","doi":"10.3897/mycokeys.108.131983","DOIUrl":"https://doi.org/10.3897/mycokeys.108.131983","url":null,"abstract":"<p><p><i>Metacampanella</i> is an important genus in the Marasmiaceae family. We collected specimens during our investigations in China and Mongolia. Through morphological and molecular phylogenetic analyses, we identified two new species of this genus: <i>Metacampanellasubtricolor</i> and <i>Metacampanellacoprophila</i>. In addition, we identified <i>Metacampanellatricolor</i> as a novel combination. Molecular systematic studies support these results. Illustrated descriptions, taxonomic discussions, and keys to the genus are provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11408874/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-10eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.127292
Michaela Caboňová, Renáta Vadkertiová, Slavomír Adamčík, Kamila Bacigálová, Marek Slovák, Shanza Zaib, Miroslav Caboň
Phylogenetic analysis of four DNA regions (ITS, LSU, mtSSU and tef1α) supported the existence of five European Taphrina species which colonise Alnus in Europe. In addition to previously well-defined species, T.viridis is, for the first time recognised, by molecular study as a species related to T.sadebeckii. Analysis of publicly available sequences of barcoding regions suggested that T.viridis is only associated with A.alnobetula and no other Taphrina species colonize this host tree. Symptomatic, morphological, and physiological characterisation of T.viridis are provided together with the key for identification of Alnus associated Taphrina species in Europe and North America.
四个 DNA 区域(ITS、LSU、mtSSU 和 tef1α)的系统发育分析表明,在欧洲有五个欧洲 Taphrina 物种在桤木中定居。除了以前定义明确的物种外,通过分子研究,T.viridis首次被确认为与T.sadebeckii有关的物种。对公开的条形码区域序列的分析表明,T.viridis只与A.alnobetula有关,没有其他Taphrina物种在这种寄主树上定殖。本文提供了 T.viridis的症状、形态和生理特征,以及欧洲和北美洲与桤木相关的 Taphrina 物种的鉴定要点。
{"title":"Taxonomic reintroduction of <i>Taphrinaviridis</i> (Taphrinales, Ascomycota) associated with <i>Alnusalnobetula</i> as one of five well defined European species colonizing alders.","authors":"Michaela Caboňová, Renáta Vadkertiová, Slavomír Adamčík, Kamila Bacigálová, Marek Slovák, Shanza Zaib, Miroslav Caboň","doi":"10.3897/mycokeys.108.127292","DOIUrl":"https://doi.org/10.3897/mycokeys.108.127292","url":null,"abstract":"<p><p>Phylogenetic analysis of four DNA regions (ITS, LSU, mtSSU and <i>tef1α</i>) supported the existence of five European <i>Taphrina</i> species which colonise <i>Alnus</i> in Europe. In addition to previously well-defined species, <i>T.viridis</i> is, for the first time recognised, by molecular study as a species related to <i>T.sadebeckii</i>. Analysis of publicly available sequences of barcoding regions suggested that <i>T.viridis</i> is only associated with <i>A.alnobetula</i> and no other <i>Taphrina</i> species colonize this host tree. Symptomatic, morphological, and physiological characterisation of <i>T.viridis</i> are provided together with the key for identification of <i>Alnus</i> associated <i>Taphrina</i> species in Europe and North America.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11408875/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299107","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Molecular phylogeny and morphological characteristics of collections of diatrypaceous fungi from Guizhou Province, China, lead to the establishment of a new genus, Stromatolinea, and the identification of four new species and two new combinations. The taxa were found growing on the dead culms of Phyllostachys bamboo. The new genus is distinguished by its well-developed, discrete linear stromata with yellow interior tissue and allantoid subhyaline ascospores. The newly described species are Stromatolineagrisea, S.guizhouensis, S.hydei, and S.xishuiensis. Additionally, two new combinations, Stromatolinealinearis and S.phaselina, are proposed based on comparative analysis and morphology. Phylogenetic analyses were conducted using ITS and TUB2 sequences. The study includes comprehensive morphological descriptions, illustrations, and a phylogenetic tree depicting the placement of the new taxa.
{"title":" <i>Stromatolinea</i>, a new diatrypaceous fungal genus (Ascomycota, Sordariomycetes, Xylariales, Diatrypaceae) from China.","authors":"Kamran Habib, Xin Zhou, Wenyu Zeng, Xu Zhang, Hongmin Hu, Qianzhen Wu, Lili Liu, Yan Lin, Xiangchun Shen, Jichuan Kang, Qirui Li","doi":"10.3897/mycokeys.108.126712","DOIUrl":"https://doi.org/10.3897/mycokeys.108.126712","url":null,"abstract":"<p><p>Molecular phylogeny and morphological characteristics of collections of diatrypaceous fungi from Guizhou Province, China, lead to the establishment of a new genus, <i>Stromatolinea</i>, and the identification of four new species and two new combinations. The taxa were found growing on the dead culms of <i>Phyllostachys</i> bamboo. The new genus is distinguished by its well-developed, discrete linear stromata with yellow interior tissue and allantoid subhyaline ascospores. The newly described species are <i>Stromatolineagrisea</i>, <i>S.guizhouensis</i>, <i>S.hydei</i>, and <i>S.xishuiensis</i>. Additionally, two new combinations, <i>Stromatolinealinearis</i> and <i>S.phaselina</i>, are proposed based on comparative analysis and morphology. Phylogenetic analyses were conducted using ITS and TUB2 sequences. The study includes comprehensive morphological descriptions, illustrations, and a phylogenetic tree depicting the placement of the new taxa.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11391124/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299103","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-04eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.130565
Wenyu Zeng, Kamran Habib, Xin Zhou, Yulin Ren, Xiangchun Shen, Bei Wang, Yingqian Kang, Jichuan Kang, Qirui Li
This study presents the identification of four novel Xylaria species, discovered in the karst region of China. The discovery was facilitated by a rigorous analysis that encompassed both morpho-anatomical features and multi-locus phylogenetics utilizing sequences from the ITS, rpb2, and TUB2 loci. The newly identified species are designated as Xylariajichuaniisp. nov., X.nanningensissp. nov., X.orientalissp. nov., and X.taiyangheensissp. nov. The distinction of these species from their known counterparts was verified through comparison of morphological features and phylogenetic analysis. The study further provides detailed morphological descriptions, illustrative representations, and a phylogenetic tree, all of which contribute to the taxonomic positioning of these novel species.
{"title":"Morphology and multigene phylogeny reveal four new <i>Xylaria</i> (Xylariales, Xylariaceae) species from karst region in China.","authors":"Wenyu Zeng, Kamran Habib, Xin Zhou, Yulin Ren, Xiangchun Shen, Bei Wang, Yingqian Kang, Jichuan Kang, Qirui Li","doi":"10.3897/mycokeys.108.130565","DOIUrl":"https://doi.org/10.3897/mycokeys.108.130565","url":null,"abstract":"<p><p>This study presents the identification of four novel <i>Xylaria</i> species, discovered in the karst region of China. The discovery was facilitated by a rigorous analysis that encompassed both morpho-anatomical features and multi-locus phylogenetics utilizing sequences from the ITS, <i>rpb</i>2, and <i>TUB</i>2 loci. The newly identified species are designated as <i>Xylariajichuanii</i> <b>sp. nov.</b>, <i>X.nanningensis</i> <b>sp. nov.</b>, <i>X.orientalis</i> <b>sp. nov.</b>, and <i>X.taiyangheensis</i> <b>sp. nov.</b> The distinction of these species from their known counterparts was verified through comparison of morphological features and phylogenetic analysis. The study further provides detailed morphological descriptions, illustrative representations, and a phylogenetic tree, all of which contribute to the taxonomic positioning of these novel species.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11391122/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-03eCollection Date: 2024-01-01DOI: 10.3897/mycokeys.108.125382
Yixuan Li, Lu Lin, Jing Cao, Mingxu Gan, Xinlei Fan
Colletotrichum species are significant pathogens of various economic plant hosts worldwide. In this study, 45 Colletotrichum isolates were obtained from symptomatic walnut leaves of walnut anthracnose in Shaanxi and Sichuan Provinces. In conjunction with morphological evidence and multi-gene phylogenetic analyses of internal transcribed spacer (ITS), actin (act), chitin synthase 1 (chs1), glyceraldehyde-3-phosphate dehydrogenase (gapdh) and beta-tubulin (tub2) sequences support the introduction of three new species, namely Colletotrichumcordae, C.guangyuanense and C.juglandium. Five species of Colletotrichum were identified to be C.fioriniae of the C.acutatum species complex, C.karsti of the C.boninense species complex, C.gloeosporioides, C.mengyinense and C.siamense of the C.gloeosporioides species complex. The three new species are described and illustrated in this paper and compared with taxa in the Colletotrichumgloeosporioides species complex. The current results improve the understanding of Colletotrichum species causing walnut anthracnose in China.
{"title":"Three new species of <i>Colletotrichum</i> (Glomerellales, Glomerellaceae) associated with walnut (<i>Juglansregia</i>) anthracnose from China.","authors":"Yixuan Li, Lu Lin, Jing Cao, Mingxu Gan, Xinlei Fan","doi":"10.3897/mycokeys.108.125382","DOIUrl":"https://doi.org/10.3897/mycokeys.108.125382","url":null,"abstract":"<p><p><i>Colletotrichum</i> species are significant pathogens of various economic plant hosts worldwide. In this study, 45 <i>Colletotrichum</i> isolates were obtained from symptomatic walnut leaves of walnut anthracnose in Shaanxi and Sichuan Provinces. In conjunction with morphological evidence and multi-gene phylogenetic analyses of internal transcribed spacer (ITS), actin (<i>act), chitin synthase 1 (chs1), glyceraldehyde-3-phosphate dehydrogenase (gapdh</i>) and beta-tubulin (<i>tub2</i>) sequences support the introduction of three new species, namely <i>Colletotrichumcordae</i>, <i>C.guangyuanense</i> and <i>C.juglandium</i>. Five species of <i>Colletotrichum</i> were identified to be <i>C.fioriniae</i> of the <i>C.acutatum</i> species complex, <i>C.karsti</i> of the <i>C.boninense</i> species complex, <i>C.gloeosporioides</i>, <i>C.mengyinense</i> and <i>C.siamense</i> of the <i>C.gloeosporioides</i> species complex. The three new species are described and illustrated in this paper and compared with taxa in the <i>Colletotrichumgloeosporioides</i> species complex. The current results improve the understanding of <i>Colletotrichum</i> species causing walnut anthracnose in China.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11387834/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142299108","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The wood-inhabiting fungi play an integral role in wood degradation and the cycle of matter in the ecological system. They are considered as the "key player" in wood decomposition, because of their ability to produce lignocellulosic enzymes that break down woody lignin, cellulose and hemicellulose. In the present study, four new wood-inhabiting fungal species, Adustochaetealbomarginata, Ad.punctata, Alloexidiopsisgrandinea and Al.xantha collected from southern China, are proposed, based on a combination of morphological features and molecular evidence. Adustochaetealbomarginata is characterised by resupinate basidiomata with cream to buff, a smooth, cracked, hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores (12-17.5 × 6.5-9 µm). Adustochaetepunctata is characterised by resupinate basidiomata with cream, a smooth, punctate hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores (13.5-18 × 6-8.2 µm). Alloexidiopsisgrandinea is characterised by resupinate basidiomata with buff to slightly yellowish, a grandinioid hymenial surface, a monomitic hyphal system with clamped generative hyphae and allantoid basidiospores (10-12.3 × 5-5.8 µm). Additionally, Alloexidiopsisxantha is characterised by resupinate basidiomata with cream to slightly buff, a smooth hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores measuring 20-24 × 5-6.2 µm. Sequences of the internal transcribed spacers (ITS) and the large subunit (nrLSU) of the nuclear ribosomal DNA (rDNA) markers of the studied samples were generated. Phylogenetic analyses were performed with the Maximum Likelihood, Maximum Parsimony and Bayesian Inference methods. The phylogram, based on the ITS+nLSU rDNA gene regions, revealed that four new species were assigned to the genera Adustochaete and Alloexidiopsis within the order Auriculariales, individually. The phylogenetic tree inferred from the ITS sequences highlighted that Ad.albomarginata was retrieved as a sister to Ad.yunnanensis and the species Ad.punctata was sister to Ad.rava. The topology, based on the ITS sequences, showed that Al.grandinea was retrieved as a sister to Al.schistacea and the taxon Al.xantha formed a monophyletic lineage. Furthermore, two identification keys to Adustochaete and Alloexidiopsis worldwide are provided.
{"title":"Taxonomy and phylogeny of Auriculariales (Agaricomycetes, Basidiomycota) with descriptions of four new species from south-western China.","authors":"Junhong Dong, Yonggao Zhu, Chengbin Qian, Changlin Zhao","doi":"10.3897/mycokeys.108.128659","DOIUrl":"10.3897/mycokeys.108.128659","url":null,"abstract":"<p><p>The wood-inhabiting fungi play an integral role in wood degradation and the cycle of matter in the ecological system. They are considered as the \"key player\" in wood decomposition, because of their ability to produce lignocellulosic enzymes that break down woody lignin, cellulose and hemicellulose. In the present study, four new wood-inhabiting fungal species, <i>Adustochaetealbomarginata</i>, <i>Ad.punctata</i>, <i>Alloexidiopsisgrandinea</i> and <i>Al.xantha</i> collected from southern China, are proposed, based on a combination of morphological features and molecular evidence. <i>Adustochaetealbomarginata</i> is characterised by resupinate basidiomata with cream to buff, a smooth, cracked, hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores (12-17.5 × 6.5-9 µm). <i>Adustochaetepunctata</i> is characterised by resupinate basidiomata with cream, a smooth, punctate hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores (13.5-18 × 6-8.2 µm). <i>Alloexidiopsisgrandinea</i> is characterised by resupinate basidiomata with buff to slightly yellowish, a grandinioid hymenial surface, a monomitic hyphal system with clamped generative hyphae and allantoid basidiospores (10-12.3 × 5-5.8 µm). Additionally, <i>Alloexidiopsisxantha</i> is characterised by resupinate basidiomata with cream to slightly buff, a smooth hymenial surface, a monomitic hyphal system with clamped generative hyphae and subcylindrical to allantoid basidiospores measuring 20-24 × 5-6.2 µm. Sequences of the internal transcribed spacers (ITS) and the large subunit (nrLSU) of the nuclear ribosomal DNA (rDNA) markers of the studied samples were generated. Phylogenetic analyses were performed with the Maximum Likelihood, Maximum Parsimony and Bayesian Inference methods. The phylogram, based on the ITS+nLSU rDNA gene regions, revealed that four new species were assigned to the genera <i>Adustochaete</i> and <i>Alloexidiopsis</i> within the order Auriculariales, individually. The phylogenetic tree inferred from the ITS sequences highlighted that <i>Ad.albomarginata</i> was retrieved as a sister to <i>Ad.yunnanensis</i> and the species <i>Ad.punctata</i> was sister to <i>Ad.rava</i>. The topology, based on the ITS sequences, showed that <i>Al.grandinea</i> was retrieved as a sister to <i>Al.schistacea</i> and the taxon <i>Al.xantha</i> formed a monophyletic lineage. Furthermore, two identification keys to <i>Adustochaete</i> and <i>Alloexidiopsis</i> worldwide are provided.</p>","PeriodicalId":48720,"journal":{"name":"Mycokeys","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11380053/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142156435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}