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Bluetongue Research at a Crossroads: Modern Genomics Tools Can Pave the Way to New Insights. 十字路口的蓝舌病研究:现代基因组学工具可以为新的见解铺平道路。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.1146/annurev-animal-051721-023724
Jennifer Kopanke, Molly Carpenter, Justin Lee, Kirsten Reed, Case Rodgers, Mollie Burton, Kierra Lovett, Joseph A Westrich, Erin McNulty, Emily McDermott, Carly Barbera, Sean Cavany, Jason R Rohr, T Alex Perkins, Candace K Mathiason, Mark Stenglein, Christie Mayo

Bluetongue virus (BTV) is an arthropod-borne, segmented double-stranded RNA virus that can cause severe disease in both wild and domestic ruminants. BTV evolves via several key mechanisms, including the accumulation of mutations over time and the reassortment of genome segments.Additionally, BTV must maintain fitness in two disparate hosts, the insect vector and the ruminant. The specific features of viral adaptation in each host that permit host-switching are poorly characterized. Limited field studies and experimental work have alluded to the presence of these phenomena at work, but our understanding of the factors that drive or constrain BTV's genetic diversification remains incomplete. Current research leveraging novel approaches and whole genome sequencing applications promises to improve our understanding of BTV's evolution, ultimately contributing to the development of better predictive models and management strategies to reduce future impacts of bluetongue epizootics.

蓝舌病毒(BTV)是一种节肢动物传播的分节双链RNA病毒,可在野生和家养反刍动物中引起严重疾病。BTV通过几个关键机制进化,包括随着时间的推移突变的积累和基因组片段的重组。此外,BTV必须在昆虫媒介和反刍动物这两个不同的宿主中保持适应性。每个宿主中允许宿主转换的病毒适应的具体特征尚不清楚。有限的实地研究和实验工作暗示了这些现象在工作中的存在,但我们对驱动或限制BTV遗传多样化的因素的理解仍然不完整。目前的研究利用新方法和全基因组测序应用有望提高我们对蓝舌病进化的理解,最终有助于开发更好的预测模型和管理策略,以减少蓝舌病流行病的未来影响。
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引用次数: 2
Potential Applications and Perspectives of Humanized Mouse Models. 人源化小鼠模型的潜在应用和前景。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-10 DOI: 10.1146/annurev-animal-020420-033029
Weijian Ye, Qingfeng Chen

As medical and pharmacological technology advances, new and complex modalities of disease treatment that are more personalized and targeted are being developed. Often these modalities must be validated in the presence of critical components of the human biological system. Given the incongruencies between murine and human biology, as well as the human-tropism of certain drugs and pathogens, the selection of animal models that accurately recapitulate the intricacies of the human biological system becomes more salient for disease modeling and preclinical testing. Immunodeficient mice engrafted with functional human tissues (so-called humanized mice), which allow for the study of physiologically relevant disease mechanisms, have thus become an integral aspect of biomedical research. This review discusses the recent advancements and applications of humanized mouse models on human immune system and liver humanization in modeling human diseases, as well as how they can facilitate translational medicine.

随着医疗和药物技术的发展,人们正在开发更加个性化和有针对性的新型复杂疾病治疗模式。通常,这些模式必须在人类生物系统的关键组成部分存在的情况下才能得到验证。鉴于小鼠和人类生物学之间的不一致性,以及某些药物和病原体的人类趋向性,选择能准确再现人类生物系统复杂性的动物模型在疾病建模和临床前试验中变得更加重要。因此,接种了功能性人体组织的免疫缺陷小鼠(即所谓的人源化小鼠)已成为生物医学研究中不可或缺的一部分。本综述将讨论人源化小鼠模型在人类免疫系统和肝脏人源化人类疾病建模中的最新进展和应用,以及它们如何促进转化医学的发展。
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引用次数: 9
Chagas Disease Ecology in the United States: Recent Advances in Understanding Trypanosoma cruzi Transmission Among Triatomines, Wildlife, and Domestic Animals and a Quantitative Synthesis of Vector-Host Interactions. 美国恰加斯病生态学:了解克氏锥虫在锥蝽、野生动物和家畜之间传播的最新进展以及媒介-宿主相互作用的定量综合。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-10 DOI: 10.1146/annurev-animal-013120-043949
Rachel E Busselman, Sarah A Hamer

Chagas disease, a neglected tropical disease present in the Americas, is caused by the parasite Trypanosoma cruzi and is transmitted by triatomine kissing bug vectors. Hundreds of vertebrate host species are involved in the ecology of Chagas disease. The sylvatic nature of most triatomines found in the United States accounts for high levels of animal infections but few reports of human infections. This review focuses on triatomine distributions and animal infections in the southern United States. A quantitative synthesis of available US data from triatomine bloodmeal analysis studies shows that dogs, humans, and rodents are key taxa for feeding triatomines. Imperfect and unvalidated diagnostic tools for wildlife complicate the study of animal T. cruzi infections, and integrated vector management approaches are needed to reduce parasite transmission in nature. The diversity of animal species involved in Chagas disease ecology underscores the importance of a One Health approach for disease research and management.

恰加斯病是存在于美洲的一种被忽视的热带病,由克氏锥虫寄生虫引起,并通过锥蝽吻虫媒介传播。数百种脊椎动物宿主物种与恰加斯病的生态有关。在美国发现的大多数三聚氰胺的森林性质导致了高水平的动物感染,但很少有人类感染的报告。这篇综述的重点是在美国南部的triatomine分布和动物感染。一项对美国triatomine血粉分析研究数据的定量综合研究表明,狗、人类和啮齿动物是喂食triatomines的关键类群。不完善和未经验证的野生动物诊断工具使动物克氏弓形虫感染的研究复杂化,需要综合媒介管理方法来减少寄生虫在自然界的传播。恰加斯病生态学中涉及的动物物种的多样性强调了“同一个健康”方法对疾病研究和管理的重要性。
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引用次数: 19
Adaptations and Diversity of Antarctic Fishes: A Genomic Perspective. 南极鱼类的适应性和多样性:基因组学视角。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-08 DOI: 10.1146/annurev-animal-081221-064325
Jacob M Daane, H William Detrich

Antarctic notothenioid fishes are the classic example of vertebrate adaptive radiation in a marine environment. Notothenioids diversified from a single common ancestor ∼22 Mya to between 120 and 140 species today, and they represent ∼90% of fish biomass on the continental shelf of Antarctica. As they diversified in the cold Southern Ocean, notothenioids evolved numerous traits, including osteopenia, anemia, cardiomegaly, dyslipidemia, and aglomerular kidneys, that are beneficial or tolerated in their environment but are pathological in humans. Thus, notothenioids are models for understanding adaptive radiations, physiological and biochemical adaptations to extreme environments, and genetic mechanisms of human disease. Since 2014, 16 notothenioid genomes have been published, which enable a first-pass holistic analysis of the notothenioid radiation and the genetic underpinnings of novel notothenioid traits. Here, we review the notothenioid radiation from a genomic perspective and integrate our insights with recent observations from other fish radiations.

南极南极南极鱼类是脊椎动物在海洋环境中适应辐射的典型例子。南极鱼从大约22亿年前的单一共同祖先多样化到今天的120至140种,它们占南极洲大陆架鱼类生物量的90%。当它们在寒冷的南大洋中多样化时,南极鱼进化出了许多特征,包括骨质减少、贫血、心脏肥大、血脂异常和肾小球,这些特征在它们的环境中是有益的或耐受的,但在人类中却是病态的。因此,南极鱼是理解适应性辐射、对极端环境的生理和生化适应以及人类疾病遗传机制的模型。自2014年以来,已发表了16个南极鱼基因组,首次全面分析了南极鱼辐射和南极鱼新性状的遗传基础。在这里,我们从基因组的角度回顾了南极鱼的辐射,并将我们的见解与最近对其他鱼类辐射的观察相结合。
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引用次数: 14
Dog Models of Aging. 狗的衰老模型。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.1146/annurev-animal-051021-080937
Audrey Ruple, Evan MacLean, Noah Snyder-Mackler, Kate E Creevy, Daniel Promislow

As the most phenotypically diverse mammalian species that shares human environments and access to sophisticated healthcare, domestic dogs have unique potential to inform our understanding of the determinants of aging. Here we outline key concepts in the study of aging and illustrate the value of research with dogs, which can improve dog health and support translational discoveries. We consider similarities and differences in aging and age-related diseases in dogs and humans and summarize key advances in our understanding of genetic and environmental risk factors for morbidity and mortality in dogs. We address health outcomes ranging from cancer to cognitive function and highlight emerging research opportunities from large-scale cohort studies in companion dogs. We conclude that studying aging in dogs could overcome many limitations of laboratory models, most notably, the ability to assess how aging-associated pathways influence aging in real-world environments similar to those experienced by humans.

作为最具表型多样性的哺乳动物物种,与人类共享环境并获得复杂的医疗保健,家养狗具有独特的潜力,可以帮助我们了解衰老的决定因素。在这里,我们概述了衰老研究中的关键概念,并说明了对狗进行研究的价值,这可以改善狗的健康并支持转化发现。我们考虑了狗和人类在衰老和与年龄相关的疾病方面的异同,并总结了我们对狗发病率和死亡率的遗传和环境风险因素的理解方面的关键进展。我们讨论了从癌症到认知功能的健康结果,并强调了伴侣犬大规模队列研究的新兴研究机会。我们得出的结论是,研究狗的衰老可以克服实验室模型的许多局限性,最值得注意的是,能够评估与衰老相关的途径如何在与人类相似的现实环境中影响衰老。
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引用次数: 14
Opportunities and Limitations for Reproductive Science in Species Conservation. 物种保护中生殖科学的机遇与局限。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-10-26 DOI: 10.1146/annurev-animal-013120-030858
William V Holt, Pierre Comizzoli
Reproductive science in the context of conservation biology is often understood solely in terms of breeding threatened species. Although technologies developed primarily for agriculture or biomedicine have a potentially important role in species conservation, their effectiveness is limited if we regard the main objective of animal conservation as helping to support populations rather than to breed a small number of individuals. The global threats facing wild species include the consequences of climate change, population growth, urbanization, atmospheric and water pollution, and the release of chemicals into the environment, to cite but a few. Reproductive sciences provide important and often unexpected windows into many of these consequences, and our aim here is both to demonstrate the breadth of reproductive science and the importance of basic knowledge and to suggest where some of the insights might be useful in mitigating the problems. Expected final online publication date for the Annual Review of Animal Biosciences, Volume 10 is February 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
在保护生物学的背景下,生殖科学通常只被理解为繁殖受威胁物种。虽然主要为农业或生物医学开发的技术在物种保护中具有潜在的重要作用,但如果我们认为动物保护的主要目标是帮助维持种群而不是繁殖少数个体,那么它们的有效性就有限了。野生物种面临的全球性威胁包括气候变化、人口增长、城市化、大气和水污染以及化学物质释放到环境中的后果,这只是其中的几个例子。生殖科学为研究这些问题提供了重要且往往出乎意料的窗口,我们在这里的目的是既要展示生殖科学的广度,又要展示基础知识的重要性,并提出一些见解可能有助于缓解这些问题。
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引用次数: 6
The Coevolution of Placentation and Cancer. 胎盘和癌症的共同进化。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-15 DOI: 10.1146/annurev-animal-020420-031544
Günter P Wagner, Kshitiz, Anasuya Dighe, Andre Levchenko

Analogies between placentation, in particular the behavior of trophoblast cells, and cancer have been noted since the beginning of the twentieth century. To what degree these can be explained as a consequence of the evolution of placentation has been unclear. In this review, we conclude that many similarities between trophoblast and cancer cells are shared with other, phylogenetically older processes than placentation. The best candidates for cancer hallmarks that can be explained by the evolution of eutherian placenta are mechanisms of immune evasion. Another dimension of the maternal accommodation of the placenta with an impact on cancer malignancy is the evolution of endometrial invasibility. Species with lower degrees of placental invasion tend to have lower vulnerability to cancer malignancy. We finally identify several areas in which one could expect to see coevolutionary changes in placental and cancer biology but that, to our knowledge, have not been explored.

胎盘,特别是滋养细胞的行为,与癌症之间的相似性自20世纪初就已被注意到。这些在多大程度上可以解释为胎盘进化的结果还不清楚。在这篇综述中,我们得出结论,滋养细胞和癌细胞之间的许多相似之处与其他系统发育上比胎盘发育更古老的过程相同。真性胎盘的进化可以解释癌症特征的最佳候选是免疫逃避机制。胎盘对恶性肿瘤影响的另一个方面是子宫内膜侵入性的演变。胎盘侵袭程度越低的物种对恶性肿瘤的易感性越低。我们最终确定了几个可以在胎盘和癌症生物学中看到共同进化变化的领域,但据我们所知,这些领域还没有被探索。
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引用次数: 17
Neuroendocrine Control of Reproduction in Teleost Fish: Concepts and Controversies. 硬骨鱼生殖的神经内分泌控制:概念与争议。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-17 DOI: 10.1146/annurev-animal-020420-042015
Vance L Trudeau

During the teleost radiation, extensive development of the direct innervation mode of hypothalamo-pituitary communication was accompanied by loss of the median eminence typical of mammals. Cells secreting follicle-stimulating hormone and luteinizing hormone cells are directly innervated, distinct populations in the anterior pituitary. So far, ∼20 stimulatory and ∼10 inhibitory neuropeptides, 3 amines, and 3 amino acid neurotransmitters are implicated in the control of reproduction. Positive and negative sex steroid feedback loops operate in both sexes. Gene mutation models in zebrafish and medaka now challenge our general understanding of vertebrate neuropeptidergic control. New reproductive neuropeptides are emerging. These include but are not limited to nesfatin 1, neurokinin B, and the secretoneurins. A generalized model for the neuroendocrine control of reproduction is proposed. Hopefully, this will serve as a research framework on diverse species to help explain the evolution of neuroendocrine control and lead to the discovery of new hormones with novel applications.

在硬骨鱼辐射期间,下丘脑-垂体直接神经支配模式的广泛发展伴随着哺乳动物典型的中隆起的丧失。分泌促卵泡激素和促黄体激素的细胞直接受神经支配,在垂体前叶中有不同的种群。到目前为止,大约有20种刺激神经肽和10种抑制性神经肽、3种胺类和3种氨基酸类神经递质参与生殖的控制。积极和消极的性类固醇反馈循环在两性中都起作用。斑马鱼和medaka的基因突变模型现在挑战了我们对脊椎动物神经肽能控制的一般理解。新的生殖神经肽正在出现。这些包括但不限于nesfatin 1,神经激肽B和分泌神经素。提出了生殖神经内分泌控制的广义模型。希望这将作为一个不同物种的研究框架,帮助解释神经内分泌控制的进化,并导致发现具有新用途的新激素。
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引用次数: 10
Host Genetic Determinants of the Microbiome Across Animals: From Caenorhabditis elegans to Cattle. 动物微生物组的宿主遗传决定因素:从秀丽隐杆线虫到牛。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.1146/annurev-animal-020420-032054
Erica P Ryu, Emily R Davenport

Animals harbor diverse communities of microbes within their gastrointestinal tracts. Phylogenetic relationship, diet, gut morphology, host physiology, and ecology all influence microbiome composition within and between animal clades. Emerging evidence points to host genetics as also playing a role in determining gut microbial composition within species. Here, we discuss recent advances in the study of microbiome heritability across a variety of animal species. Candidate gene and discovery-based studies in humans, mice, Drosophila, Caenorhabditis elegans, cattle, swine, poultry, and baboons reveal trends in the types of microbes that are heritable and the host genes and pathways involved in shaping the microbiome. Heritable gut microbes within a host species tend to be phylogenetically restricted. Host genetic variation in immune- and growth-related genes drives the abundances of these heritable bacteria within the gut. With only a small slice of the metazoan branch of the tree of life explored to date, this is an area rife with opportunities to shed light into the mechanisms governing host-microbe relationships.

动物的胃肠道内蕴藏着多种多样的微生物群落。系统发育关系、饮食、肠道形态、宿主生理和生态学都会影响动物支系内部和之间的微生物群组成。新的证据表明,宿主遗传学也在决定物种内的肠道微生物组成方面发挥作用。在此,我们将讨论各种动物物种微生物组遗传性研究的最新进展。在人类、小鼠、果蝇、秀丽隐杆线虫、牛、猪、家禽和狒狒中进行的候选基因研究和基于发现的研究揭示了可遗传的微生物类型以及参与形成微生物组的宿主基因和途径的趋势。宿主物种内可遗传的肠道微生物往往受到系统发育的限制。宿主在免疫和生长相关基因上的遗传变异,决定了这些可遗传细菌在肠道内的丰度。迄今为止,我们只探索了生命树中元古代分支的一小部分,但这一领域充满了揭示宿主与微生物关系机制的机会。
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引用次数: 0
Local and Systemic T Cell Immunity in Fighting Pig Viral and Bacterial Infections. 对抗猪病毒和细菌感染的局部和全身T细胞免疫。
IF 12 1区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2022-02-15 Epub Date: 2021-11-01 DOI: 10.1146/annurev-animal-013120-044226
Wilhelm Gerner, Kerstin H Mair, Selma Schmidt

T cells are an essential component of the adaptive immune system. Over the last 15 years, a constantly growing toolbox with which to study T cell biology in pigs has allowed detailed investigations on these cells in various viral and bacterial infections. This review provides an overview on porcine CD4, CD8, and γδ T cells and the current knowledge on the differentiation of these cells following antigen encounter. Where available, the responses of these cells to viral infections like porcine reproductive and respiratory syndrome virus, classical swine fever virus, swine influenza A virus, and African swine fever virus are outlined. In addition, knowledge on the porcine T cell response to bacterial infections like Actinobacillus pleuropneumoniae and Salmonella Typhimurium is reviewed. For CD4 T cells, the response to the outlined infections is reflected toward the Th1/Th2/Th17/Tfh/Treg paradigm for functional differentiation.

T细胞是适应性免疫系统的重要组成部分。在过去的15年里,研究猪体内T细胞生物学的工具箱不断增加,使得对这些细胞在各种病毒和细菌感染中的详细研究成为可能。本文综述了猪CD4、CD8和γδ T细胞的研究进展,以及这些细胞在遭遇抗原后的分化情况。在可能的情况下,概述了这些细胞对病毒感染的反应,如猪生殖和呼吸综合征病毒、猪瘟病毒、甲型猪流感病毒和非洲猪瘟病毒。此外,对猪T细胞对胸膜肺炎放线杆菌和鼠伤寒沙门氏菌等细菌感染的反应进行了综述。对于CD4 T细胞,对上述感染的反应反映在功能分化的Th1/Th2/Th17/Tfh/Treg范式上。
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引用次数: 7
期刊
Annual Review of Animal Biosciences
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