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The Nereid on the rise: Platynereis as a model system. Nereid的崛起:Platynereis作为一个模型系统。
IF 4.1 2区 生物学 Q1 DEVELOPMENTAL BIOLOGY Pub Date : 2021-09-27 DOI: 10.1186/s13227-021-00180-3
B Duygu Özpolat, Nadine Randel, Elizabeth A Williams, Luis Alberto Bezares-Calderón, Gabriele Andreatta, Guillaume Balavoine, Paola Y Bertucci, David E K Ferrier, Maria Cristina Gambi, Eve Gazave, Mette Handberg-Thorsager, Jörg Hardege, Cameron Hird, Yu-Wen Hsieh, Jerome Hui, Kevin Nzumbi Mutemi, Stephan Q Schneider, Oleg Simakov, Hernando M Vergara, Michel Vervoort, Gáspár Jékely, Kristin Tessmar-Raible, Florian Raible, Detlev Arendt

The Nereid Platynereis dumerilii (Audouin and Milne Edwards (Annales des Sciences Naturelles 1:195-269, 1833) is a marine annelid that belongs to the Nereididae, a family of errant polychaete worms. The Nereid shows a pelago-benthic life cycle: as a general characteristic for the superphylum of Lophotrochozoa/Spiralia, it has spirally cleaving embryos developing into swimming trochophore larvae. The larvae then metamorphose into benthic worms living in self-spun tubes on macroalgae. Platynereis is used as a model for genetics, regeneration, reproduction biology, development, evolution, chronobiology, neurobiology, ecology, ecotoxicology, and most recently also for connectomics and single-cell genomics. Research on the Nereid started with studies on eye development and spiralian embryogenesis in the nineteenth and early twentieth centuries. Transitioning into the molecular era, Platynereis research focused on posterior growth and regeneration, neuroendocrinology, circadian and lunar cycles, fertilization, and oocyte maturation. Other work covered segmentation, photoreceptors and other sensory cells, nephridia, and population dynamics. Most recently, the unique advantages of the Nereid young worm for whole-body volume electron microscopy and single-cell sequencing became apparent, enabling the tracing of all neurons in its rope-ladder-like central nervous system, and the construction of multimodal cellular atlases. Here, we provide an overview of current topics and methodologies for P. dumerilii, with the aim of stimulating further interest into our unique model and expanding the active and vibrant Platynereis community.

dumerilii(Audouin和Milne Edwards(Annales des Sciences Naturelles 1:195-269,1833)是一种海洋环节动物,属于Nereidae,一个误入歧途的多毛类蠕虫科。Nereid表现出一种浮游底栖生物的生命周期:作为Lophotrochozoa/Spiralia超级门的一个普遍特征,它有螺旋分裂的胚胎,发育成游动的滑车幼虫。幼虫随后蜕变为底栖蠕虫,生活在大型藻类的自旋管中。Platynereis被用作遗传学、再生、生殖生物学、发育、进化、时间生物学、神经生物学、生态学、生态毒理学的模型,最近还被用作连接组学和单细胞基因组学的模型。对Nereid的研究始于19世纪和20世纪初对眼睛发育和螺旋体胚胎发生的研究。进入分子时代后,Platynereis的研究重点是后部生长和再生、神经内分泌、昼夜节律和月球周期、受精和卵母细胞成熟。其他工作包括分割、感光细胞和其他感觉细胞、软玉和群体动力学。最近,Nereid幼虫在全身体积电子显微镜和单细胞测序方面的独特优势变得明显,能够追踪其绳梯状中枢神经系统中的所有神经元,并构建多模式细胞图谱。在这里,我们概述了P.dumerilii的当前主题和方法,目的是激发人们对我们独特模式的进一步兴趣,并扩大活跃和充满活力的Platynereis社区。
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引用次数: 0
Duplication of spiralian-specific TALE genes and evolution of the blastomere specification mechanism in the bivalve lineage 双壳系中螺旋体特异性TALE基因的重复和卵裂球规范机制的进化
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-07-23 DOI: 10.21203/RS.3.RS-733292/V1
Supanat Phuangphong, Jumpei Tsunoda, H. Wada, Yoshiaki Morino
Background Despite the conserved pattern of the cell-fate map among spiralians, bivalves display several modified characteristics during their early development, including early specification of the D blastomere by the cytoplasmic content, as well as the distinctive fate of the 2d blastomere. However, it is unclear what changes in gene regulatory mechanisms led to such changes in cell specification patterns. Spiralian-TALE (SPILE) genes are a group of spiralian-specific transcription factors that play a role in specifying blastomere cell fates during early development in limpets. We hypothesised that the expansion of SPILE gene repertoires influenced the evolution of the specification pattern of blastomere cell fates. Results We performed a transcriptome analysis of early development in the purplish bifurcate mussel and identified 13 SPILE genes. Phylogenetic analysis of the SPILE gene in molluscs suggested that duplications of SPILE genes occurred in the bivalve lineage. We examined the expression patterns of the SPILE gene in mussels and found that some SPILE genes were expressed in quartet-specific patterns, as observed in limpets. Furthermore, we found that several SPILE genes that had undergone gene duplication were specifically expressed in the D quadrant, C and D quadrants or the 2d blastomere. These expression patterns were distinct from the expression patterns of SPILE in their limpet counterparts. Conclusions These results suggest that, in addition to their ancestral role in quartet specification, certain SPILE genes in mussels contribute to the specification of the C and D quadrants. We suggest that the expansion of SPILE genes in the bivalve lineage contributed to the evolution of a unique cell fate specification pattern in bivalves.
背景尽管螺旋纲动物的细胞命运图是保守的,但双壳类动物在其早期发育过程中表现出一些改变的特征,包括细胞质含量对D卵裂球的早期指定,以及2d卵裂球独特的命运。然而,目前尚不清楚是什么基因调控机制的变化导致了细胞规格模式的变化。螺旋体TALE(SPILE)基因是一组螺旋体特异性转录因子,在帽贝早期发育过程中,在指定卵裂球细胞命运方面发挥作用。我们假设SPILE基因库的扩增影响了卵裂球细胞命运的特定模式的进化。结果我们对紫色分叉贻贝的早期发育进行了转录组分析,并鉴定了13个SPILE基因。对软体动物SPILE基因的系统发育分析表明,SPILE基因重复发生在双壳类谱系中。我们检测了SPILE基因在贻贝中的表达模式,发现一些SPILE基因以四重特异性模式表达,如在帽贝中观察到的。此外,我们发现几个经过基因复制的SPILE基因在D象限、C象限和D象限或2d卵裂球中特异性表达。这些表达模式与SPILE在帽贝中的表达模式不同。结论这些结果表明,除了它们在四象限规范中的祖先作用外,贻贝中的某些SPILE基因也有助于C和D象限的规范。我们认为,SPILE基因在双壳类谱系中的扩展有助于双壳类独特细胞命运规范模式的进化。
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引用次数: 3
Cell-specific expression and individual function of prohormone convertase PC1/3 in Tribolium larval growth highlights major evolutionary changes between beetle and fly neuroendocrine systems. 激素原转化酶PC1/3在Tribolium幼虫生长中的细胞特异性表达和个体功能揭示了甲虫和苍蝇神经内分泌系统的主要进化变化。
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-06-29 DOI: 10.1186/s13227-021-00179-w
Sonja Fritzsche, Vera S Hunnekuhl

Background: The insect neuroendocrine system acts in the regulation of physiology, development and growth. Molecular evolution of this system hence has the potential to allow for major biological differences between insect groups. Two prohormone convertases, PC1/3 and PC2, are found in animals and both function in the processing of neuropeptide precursors in the vertebrate neurosecretory pathway. Whereas PC2-function is conserved between the fly Drosophila and vertebrates, ancestral PC1/3 was lost in the fly lineage and has not been functionally studied in any protostome.

Results: In order to understand its original functions and the changes accompanying the gene loss in the fly, we investigated PC1/3 and PC2 expression and function in the beetle Tribolium castaneum. We found that PC2 is broadly expressed in the nervous system, whereas surprisingly, PC1/3 expression is restricted to specific cell groups in the posterior brain and suboesophageal ganglion. Both proteases have parallel but non-redundant functions in adult beetles' viability and fertility. Female infertility following RNAi is caused by a failure to deposit sufficient yolk to the developing oocytes. Larval RNAi against PC2 produced moulting defects where the larvae were not able to shed their old cuticle. This ecdysis phenotype was also observed in a small subset of PC1/3 knockdown larvae and was strongest in a double knockdown. Unexpectedly, most PC1/3-RNAi larvae showed strongly reduced growth, but went through larval moults despite minimal to zero weight gain.

Conclusions: The cell type-specific expression of PC1/3 and its essential requirement for larval growth highlight the important role of this gene within the insect neuroendocrine system. Genomic conservation in most insect groups suggests that it has a comparable individual function in other insects as well, which has been replaced by alternative mechanisms in flies.

背景:昆虫神经内分泌系统在生理、发育和生长等方面起着调节作用。因此,这个系统的分子进化有可能允许昆虫类群之间的主要生物学差异。在动物中发现了两种激素原转化酶PC1/3和PC2,它们都在脊椎动物神经分泌通路中参与神经肽前体的加工。尽管pc2功能在果蝇和脊椎动物之间是保守的,但祖先的PC1/3在果蝇谱系中丢失,尚未在任何原生动物中进行功能研究。结果:为了解PC1/3和PC2基因在蝇类中的表达及功能变化,研究了PC1/3和PC2在Tribolium castaneum中的表达和功能。我们发现PC2在神经系统中广泛表达,而令人惊讶的是,PC1/3的表达仅限于脑后和食管下神经节的特定细胞群。这两种蛋白酶在成虫的生存能力和繁殖力中具有相似但非冗余的功能。RNAi后的女性不育是由于无法将足够的卵黄沉积到发育中的卵母细胞中引起的。针对PC2的RNAi会产生脱毛缺陷,即幼虫不能脱落旧的角质层。在PC1/3敲除的一小部分幼虫中也观察到这种蜕皮表型,并且在双敲除中最强。出乎意料的是,大多数PC1/3-RNAi幼虫的生长明显下降,但尽管体重增加很少甚至为零,但仍经历了幼虫换羽。结论:PC1/3的细胞类型特异性表达及其对幼虫生长的必要要求突出了该基因在昆虫神经内分泌系统中的重要作用。大多数昆虫群体的基因组保护表明,它在其他昆虫中也具有类似的个体功能,但在果蝇中已被其他机制所取代。
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引用次数: 4
Variation on a theme: pigmentation variants and mutants of anemonefish. 主题变异:无须鳕的色素变异和突变体。
IF 4.1 2区 生物学 Q1 DEVELOPMENTAL BIOLOGY Pub Date : 2021-06-19 DOI: 10.1186/s13227-021-00178-x
Marleen Klann, Manon Mercader, Lilian Carlu, Kina Hayashi, James Davis Reimer, Vincent Laudet

Pigmentation patterning systems are of great interest to understand how changes in developmental mechanisms can lead to a wide variety of patterns. These patterns are often conspicuous, but their origins remain elusive for many marine fish species. Dismantling a biological system allows a better understanding of the required components and the deciphering of how such complex systems are established and function. Valuable information can be obtained from detailed analyses and comparisons of pigmentation patterns of mutants and/or variants from normal patterns. Anemonefishes have been popular marine fish in aquaculture for many years, which has led to the isolation of several mutant lines, and in particular color alterations, that have become very popular in the pet trade. Additionally, scattered information about naturally occurring aberrant anemonefish is available on various websites and image platforms. In this review, the available information on anemonefish color pattern alterations has been gathered and compiled in order to characterize and compare different mutations. With the global picture of anemonefish mutants and variants emerging from this, such as presence or absence of certain phenotypes, information on the patterning system itself can be gained.

色素模式系统对于了解发育机制的变化如何导致各种各样的模式具有重大意义。这些图案通常很明显,但对于许多海洋鱼类物种来说,它们的起源仍然难以捉摸。拆解一个生物系统可以更好地了解其所需的组成部分,并破译这种复杂系统是如何建立和运作的。通过详细分析和比较突变体和/或正常模式变体的色素沉着模式,可以获得宝贵的信息。多年来,无尾鱼一直是水产养殖业中很受欢迎的海水鱼,因此分离出了一些突变品系,特别是颜色改变的品系,在宠物交易中很受欢迎。此外,在各种网站和图片平台上也有关于自然发生的畸变无尾鱼的零散信息。在这篇综述中,我们收集并汇编了有关海葵鱼色彩模式改变的现有信息,以描述和比较不同的变异情况。有了茴鱼突变体和变异体的全貌,如存在或不存在某些表型,就可以获得有关图案系统本身的信息。
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引用次数: 0
Panarthropod tiptop/teashirt and spalt orthologs and their potential role as "trunk"-selector genes. 全节肢动物顶端/衬衫和空间同源基因及其作为“树干”选择基因的潜在作用。
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-06-02 DOI: 10.1186/s13227-021-00177-y
Brenda I Medina-Jiménez, Graham E Budd, Ralf Janssen

Background: In the vinegar fly Drosophila melanogaster, the homeodomain containing transcription factor Teashirt (Tsh) appears to specify trunk identity in concert with the function of the Hox genes. While in Drosophila there is a second gene closely related to tsh, called tiptop (tio), in other arthropods species only one copy exists (called tio/tsh). The expression of tsh and tio/tsh, respectively, is surprisingly similar among arthropods suggesting that its function as trunk selector gene may be conserved. Other research, for example on the beetle Tribolium castaneum, questions even conservation of Tsh function among insects. The zinc-finger transcription factor Spalt (Sal) is involved in the regulation of Drosophila tsh, but this regulatory interaction does not appear to be conserved in Tribolium either. Whether the function and interaction of tsh and sal as potential trunk-specifiers, however, is conserved is still unclear because comparative studies on sal expression (except for Tribolium) are lacking, and functional data are (if at all existing) restricted to Insecta.

Results: Here, we provide additional data on arthropod tsh expression, show the first data on onychophoran tio/tsh expression, and provide a comprehensive investigation on sal expression patterns in arthropods and an onychophoran.

Conclusions: Our data support the idea that tio/tsh genes are involved in the development of "trunk" segments by regulating limb development. Our data suggest further that the function of Sal is indeed unlikely to be conserved in trunk vs head development like in Drosophila, but early expression of sal is in line with a potential homeotic function, at least in Arthropoda.

背景:在黑腹果蝇(Drosophila melanogaster)中,含有同源结构域的转录因子teasht (Tsh)似乎与Hox基因的功能一致,指定了主干身份。虽然在果蝇中有第二个与tsh密切相关的基因,称为tiptop (tio),但在其他节肢动物物种中只存在一个拷贝(称为tio/tsh)。tsh和tio/tsh在节肢动物中的表达惊人地相似,表明其作为树干选择基因的功能可能是保守的。其他研究,例如对甲虫Tribolium castaneum的研究,甚至对昆虫中Tsh功能的守恒提出了质疑。锌指转录因子Spalt (Sal)参与果蝇的调节,但这种调节相互作用似乎在Tribolium中也不保守。然而,tsh和sal作为潜在的树干指示物的功能和相互作用是否保守尚不清楚,因为缺乏对sal表达的比较研究(除了Tribolium),而且功能数据(如果有的话)仅限于昆虫。结果:本研究提供了节肢动物tsh表达的额外数据,首次展示了甲爪动物tio/tsh表达的数据,并对节肢动物和甲爪动物的sal表达模式进行了全面的研究。结论:我们的数据支持tio/tsh基因通过调节肢体发育参与“躯干”节段发育的观点。我们的数据进一步表明,Sal的功能确实不太可能像果蝇那样在躯干和头部发育中被保守,但Sal的早期表达与潜在的同型同源功能一致,至少在节肢动物中是这样。
{"title":"Panarthropod tiptop/teashirt and spalt orthologs and their potential role as \"trunk\"-selector genes.","authors":"Brenda I Medina-Jiménez,&nbsp;Graham E Budd,&nbsp;Ralf Janssen","doi":"10.1186/s13227-021-00177-y","DOIUrl":"https://doi.org/10.1186/s13227-021-00177-y","url":null,"abstract":"<p><strong>Background: </strong>In the vinegar fly Drosophila melanogaster, the homeodomain containing transcription factor Teashirt (Tsh) appears to specify trunk identity in concert with the function of the Hox genes. While in Drosophila there is a second gene closely related to tsh, called tiptop (tio), in other arthropods species only one copy exists (called tio/tsh). The expression of tsh and tio/tsh, respectively, is surprisingly similar among arthropods suggesting that its function as trunk selector gene may be conserved. Other research, for example on the beetle Tribolium castaneum, questions even conservation of Tsh function among insects. The zinc-finger transcription factor Spalt (Sal) is involved in the regulation of Drosophila tsh, but this regulatory interaction does not appear to be conserved in Tribolium either. Whether the function and interaction of tsh and sal as potential trunk-specifiers, however, is conserved is still unclear because comparative studies on sal expression (except for Tribolium) are lacking, and functional data are (if at all existing) restricted to Insecta.</p><p><strong>Results: </strong>Here, we provide additional data on arthropod tsh expression, show the first data on onychophoran tio/tsh expression, and provide a comprehensive investigation on sal expression patterns in arthropods and an onychophoran.</p><p><strong>Conclusions: </strong>Our data support the idea that tio/tsh genes are involved in the development of \"trunk\" segments by regulating limb development. Our data suggest further that the function of Sal is indeed unlikely to be conserved in trunk vs head development like in Drosophila, but early expression of sal is in line with a potential homeotic function, at least in Arthropoda.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":null,"pages":null},"PeriodicalIF":4.1,"publicationDate":"2021-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13227-021-00177-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39054965","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sex-specific plasticity and the nutritional geometry of insulin-signaling gene expression in Drosophila melanogaster. 黑腹果蝇胰岛素信号基因表达的性别特异性可塑性和营养几何学
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-05-14 DOI: 10.1186/s13227-021-00175-0
Jeanne M C McDonald, Pegah Nabili, Lily Thorsen, Sohee Jeon, Alexander W Shingleton

Background: Sexual-size dimorphism (SSD) is replete among animals, but while the selective pressures that drive the evolution of SSD have been well studied, the developmental mechanisms upon which these pressures act are poorly understood. Ours and others' research has shown that SSD in D. melanogaster reflects elevated levels of nutritional plasticity in females versus males, such that SSD increases with dietary intake and body size, a phenomenon called sex-specific plasticity (SSP). Additional data indicate that while body size in both sexes responds to variation in protein level, only female body size is sensitive to variation in carbohydrate level. Here, we explore whether these difference in sensitivity at the morphological level are reflected by differences in how the insulin/IGF-signaling (IIS) and TOR-signaling pathways respond to changes in carbohydrates and proteins in females versus males, using a nutritional geometry approach.

Results: The IIS-regulated transcripts of 4E-BP and InR most strongly correlated with body size in females and males, respectively, but neither responded to carbohydrate level and so could not explain the sex-specific response to body size to dietary carbohydrate. Transcripts regulated by TOR-signaling did, however, respond to dietary carbohydrate in a sex-specific manner. In females, expression of dILP5 positively correlated with body size, while expression of dILP2,3 and 8, was elevated on diets with a low concentration of both carbohydrate and protein. In contrast, we detected lower levels of dILP2 and 5 protein in the brains of females fed on low concentration diets. We could not detect any effect of diet on dILP expression in males.

Conclusion: Although females and males show sex-specific transcriptional responses to changes in protein and carbohydrate, the patterns of expression do not support a simple model of the regulation of body-size SSP by either insulin- or TOR-signaling. The data also indicate a complex relationship between carbohydrate and protein level, dILP expression and dILP peptide levels in the brain. In general, diet quality and sex both affect the transcriptional response to changes in diet quantity, and so should be considered in future studies that explore the effect of nutrition on body size.

背景:动物中普遍存在性大小二形性(SSD),但尽管对驱动SSD进化的选择性压力进行了深入研究,但对这些压力作用的发育机制却知之甚少。我们和其他人的研究表明,黑腹蝇中的SSD反映了雌性相对于雄性的营养可塑性水平的提高,例如SSD会随着饮食摄入量和体型的增加而增加,这种现象被称为性别特异性可塑性(SSP)。其他数据表明,虽然雌雄体型都会对蛋白质水平的变化做出反应,但只有雌性体型对碳水化合物水平的变化敏感。在此,我们采用营养几何学方法,探讨雌性与雄性的胰岛素/IGF信号(IIS)和TOR信号通路对碳水化合物和蛋白质变化的反应是否反映了形态水平上的敏感性差异:结果:IIS调控的转录本4E-BP和InR分别与雌性和雄性的体型相关性最强,但两者都不对碳水化合物水平做出反应,因此不能解释体型对饮食碳水化合物的性别特异性反应。然而,受 TOR 信号调控的转录本确实以性别特异性的方式对饮食碳水化合物做出了反应。在雌性动物中,dILP5的表达与体型呈正相关,而在碳水化合物和蛋白质浓度都较低的膳食中,dILP2、3和8的表达都有所升高。相反,我们在低浓度日粮喂养的雌性动物大脑中检测到的 dILP2 和 5 蛋白水平较低。我们无法检测到饮食对雄性 dILP 表达的任何影响:结论:尽管雌性和雄性对蛋白质和碳水化合物的变化表现出性别特异性转录反应,但其表达模式并不支持由胰岛素或 TOR 信号调节体型 SSP 的简单模型。数据还表明,大脑中的碳水化合物和蛋白质水平、dILP 表达和 dILP 肽水平之间存在复杂的关系。总的来说,饮食质量和性别都会影响饮食数量变化的转录反应,因此在今后探讨营养对体型影响的研究中应加以考虑。
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引用次数: 0
Early embryogenesis and organogenesis in the annelid Owenia fusiformis. 梭形环节动物的早期胚胎发生和器官发生。
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-05-10 DOI: 10.1186/s13227-021-00176-z
Allan Martín Carrillo-Baltodano, Océane Seudre, Kero Guynes, José María Martín-Durán

Background: Annelids are a diverse group of segmented worms within Spiralia, whose embryos exhibit spiral cleavage and a variety of larval forms. While most modern embryological studies focus on species with unequal spiral cleavage nested in Pleistoannelida (Sedentaria + Errantia), a few recent studies looked into Owenia fusiformis, a member of the sister group to all remaining annelids and thus a key lineage to understand annelid and spiralian evolution and development. However, the timing of early cleavage and detailed morphogenetic events leading to the formation of the idiosyncratic mitraria larva of O. fusiformis remain largely unexplored.

Results: Owenia fusiformis undergoes equal spiral cleavage where the first quartet of animal micromeres are slightly larger than the vegetal macromeres. Cleavage results in a coeloblastula approximately 5 h post-fertilization (hpf) at 19 °C. Gastrulation occurs via invagination and completes 4 h later, with putative mesodermal precursors and the chaetoblasts appearing 10 hpf at the dorso-posterior side. Soon after, at 11 hpf, the apical tuft emerges, followed by the first neurons (as revealed by the expression of elav1 and synaptotagmin-1) in the apical organ and the prototroch by 13 hpf. Muscles connecting the chaetal sac to various larval tissues develop around 18 hpf and by the time the mitraria is fully formed at 22 hpf, there are FMRFamide+ neurons in the apical organ and prototroch, the latter forming a prototrochal ring. As the mitraria feeds, it grows in size and the prototroch expands through active proliferation. The larva becomes competent after ~ 3 weeks post-fertilization at 15 °C, when a conspicuous juvenile rudiment has formed ventrally.

Conclusions: Owenia fusiformis embryogenesis is similar to that of other equal spiral cleaving annelids, supporting that equal cleavage is associated with the formation of a coeloblastula, gastrulation via invagination, and a feeding trochophore-like larva in Annelida. The nervous system of the mitraria larva forms earlier and is more elaborated than previously recognized and develops from anterior to posterior, which is likely an ancestral condition to Annelida. Altogether, our study identifies the major developmental events during O. fusiformis ontogeny, defining a conceptual framework for future investigations.

背景:环节动物是螺旋体中的一组不同的分段蠕虫,其胚胎表现出螺旋分裂和各种幼虫形式。而大多数现代胚胎学研究都集中在嵌在Pleistondellida(Sedentaria + Errantia),最近的一些研究着眼于梭形Owenia fusiformis,它是所有剩余环节动物的姐妹群成员,因此是了解环节动物和螺旋动物进化和发展的关键谱系。然而,早期卵裂的时间和导致梭形O.fusiformis特异性三刺幼虫形成的详细形态发生事件在很大程度上仍未被探索。结果:梭形Owenia fusiformis经历了相等的螺旋切割,其中第一个四分之一的动物微单体比植物大单体略大。在19°C下受精(hpf)后约5小时,卵裂产生腔母细胞。胃胚形成通过内陷发生,4小时后完成,假定的中胚层前体和毛胚在背后侧出现10hpf。不久后,在11 hpf时,顶端簇出现,随后顶端器官和原滑车中的第一个神经元(如elav1和突触结合蛋白-1的表达所示)出现13 hpf。连接毛囊和各种幼虫组织的肌肉在18hpf左右发育,当密刺在22hpf完全形成时,顶端器官和原滑车中有FMRFamide+神经元,后者形成原滑车环。随着刺的进食,它的大小不断增长,原刺通过活跃的增殖而扩张。幼虫在~ 受精后3周,温度为15°C,此时腹面形成了明显的幼年雏形。结论:梭形Owenia fusiformis的胚胎发生与其他等螺旋分裂环节动物相似,支持等螺旋分裂与环节动物的腔母细胞形成、内陷原肠胚形成和取食轮状幼虫有关。mitraria幼虫的神经系统形成得更早,比以前认识到的更精细,从前部到后部发育,这可能是环节动物的祖先条件。总之,我们的研究确定了纺锤形O.fusiformis个体发育过程中的主要发育事件,为未来的研究定义了一个概念框架。
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引用次数: 24
Distinct tooth regeneration systems deploy a conserved battery of genes. 不同的牙齿再生系统利用了一组保守的基因。
IF 4.1 2区 生物学 Q1 DEVELOPMENTAL BIOLOGY Pub Date : 2021-03-25 DOI: 10.1186/s13227-021-00172-3
Tyler A Square, Shivani Sundaram, Emma J Mackey, Craig T Miller

Background: Vertebrate teeth exhibit a wide range of regenerative systems. Many species, including most mammals, reptiles, and amphibians, form replacement teeth at a histologically distinct location called the successional dental lamina, while other species do not employ such a system. Notably, a 'lamina-less' tooth replacement condition is found in a paraphyletic array of ray-finned fishes, such as stickleback, trout, cod, medaka, and bichir. Furthermore, the position, renewal potential, and latency times appear to vary drastically across different vertebrate tooth regeneration systems. The progenitor cells underlying tooth regeneration thus present highly divergent arrangements and potentials. Given the spectrum of regeneration systems present in vertebrates, it is unclear if morphologically divergent tooth regeneration systems deploy an overlapping battery of genes in their naïve dental tissues.

Results: In the present work, we aimed to determine whether or not tooth progenitor epithelia could be composed of a conserved cell type between vertebrate dentitions with divergent regeneration systems. To address this question, we compared the pharyngeal tooth regeneration processes in two ray-finned fishes: zebrafish (Danio rerio) and threespine stickleback (Gasterosteus aculeatus). These two teleost species diverged approximately 250 million years ago and demonstrate some stark differences in dental morphology and regeneration. Here, we find that the naïve successional dental lamina in zebrafish expresses a battery of nine genes (bmpr1aa, bmp6, cd34, gli1, igfbp5a, lgr4, lgr6, nfatc1, and pitx2), while active Wnt signaling and Lef1 expression occur during early morphogenesis stages of tooth development. We also find that, despite the absence of a histologically distinct successional dental lamina in stickleback tooth fields, the same battery of nine genes (Bmpr1a, Bmp6, CD34, Gli1, Igfbp5a, Lgr4, Lgr6, Nfatc1, and Pitx2) are expressed in the basalmost endodermal cell layer, which is the region most closely associated with replacement tooth germs. Like zebrafish, stickleback replacement tooth germs additionally express Lef1 and exhibit active Wnt signaling. Thus, two fish systems that either have an organized successional dental lamina (zebrafish) or lack a morphologically distinct successional dental lamina (sticklebacks) deploy similar genetic programs during tooth regeneration.

Conclusions: We propose that the expression domains described here delineate a highly conserved "successional dental epithelium" (SDE). Furthermore, a set of orthologous genes is known to mark hair follicle epithelial stem cells in mice, suggesting that regenerative systems in other epithelial appendages may utilize a related epithelial progenitor cell type, despite the highly derived nature of the resulting functional organs.

背景:脊椎动物的牙齿有多种再生系统。许多物种,包括大多数哺乳动物、爬行动物和两栖动物,在一个组织学上独特的位置形成替代牙齿,这个位置被称为继代齿膜,而其他物种则不采用这种系统。值得注意的是,"无齿膜 "的牙齿替换条件在一系列鳐鱼类中也有发现,如棍鱼、鳟鱼、鳕鱼、青鳉和比目鱼。此外,不同脊椎动物牙齿再生系统的位置、更新潜能和潜伏时间似乎也大不相同。因此,牙齿再生的祖细胞呈现出高度不同的排列和潜能。鉴于脊椎动物存在多种再生系统,目前还不清楚形态上不同的牙齿再生系统是否在其原始牙齿组织中部署了重叠的基因:在本研究中,我们旨在确定在具有不同再生系统的脊椎动物牙齿之间,牙齿祖细胞上皮是否由一种保守的细胞类型组成。为了解决这个问题,我们比较了两种鳐科鱼类:斑马鱼(Danio rerio)和三刺鱼(Gasterosteus aculeatus)的咽齿再生过程。这两种长鳍鱼类大约在 2.5 亿年前分化,在牙齿形态和再生方面存在明显差异。在这里,我们发现斑马鱼的新生牙齿层表达九个基因(bmpr1aa、bmp6、cd34、gli1、igfbp5a、lgr4、lgr6、nfatc1 和 pitx2),而在牙齿发育的早期形态发生阶段,Wnt 信号和 Lef1 表达活跃。我们还发现,尽管在棒鱼齿场中没有组织学上独特的继代齿层,但同样的九个基因(Bmpr1a、Bmp6、CD34、Gli1、Igfbp5a、Lgr4、Lgr6、Nfatc1 和 Pitx2)在最基底的内胚层细胞层中表达,而这是与替换齿芽关系最密切的区域。与斑马鱼一样,棍鱼的替牙胚也表达 Lef1,并表现出活跃的 Wnt 信号。因此,在牙齿再生过程中,两种鱼类系统要么具有有组织的继代牙层(斑马鱼),要么缺乏形态独特的继代牙层(竹鞭鱼),它们部署了类似的遗传程序:我们认为,这里描述的表达域勾勒出了一个高度保守的 "继代牙上皮"(SDE)。此外,已知一组同源基因可标记小鼠的毛囊上皮干细胞,这表明其他上皮附属器官的再生系统可能利用了相关的上皮祖细胞类型,尽管由此产生的功能器官具有高度衍生性。
{"title":"Distinct tooth regeneration systems deploy a conserved battery of genes.","authors":"Tyler A Square, Shivani Sundaram, Emma J Mackey, Craig T Miller","doi":"10.1186/s13227-021-00172-3","DOIUrl":"10.1186/s13227-021-00172-3","url":null,"abstract":"<p><strong>Background: </strong>Vertebrate teeth exhibit a wide range of regenerative systems. Many species, including most mammals, reptiles, and amphibians, form replacement teeth at a histologically distinct location called the successional dental lamina, while other species do not employ such a system. Notably, a 'lamina-less' tooth replacement condition is found in a paraphyletic array of ray-finned fishes, such as stickleback, trout, cod, medaka, and bichir. Furthermore, the position, renewal potential, and latency times appear to vary drastically across different vertebrate tooth regeneration systems. The progenitor cells underlying tooth regeneration thus present highly divergent arrangements and potentials. Given the spectrum of regeneration systems present in vertebrates, it is unclear if morphologically divergent tooth regeneration systems deploy an overlapping battery of genes in their naïve dental tissues.</p><p><strong>Results: </strong>In the present work, we aimed to determine whether or not tooth progenitor epithelia could be composed of a conserved cell type between vertebrate dentitions with divergent regeneration systems. To address this question, we compared the pharyngeal tooth regeneration processes in two ray-finned fishes: zebrafish (Danio rerio) and threespine stickleback (Gasterosteus aculeatus). These two teleost species diverged approximately 250 million years ago and demonstrate some stark differences in dental morphology and regeneration. Here, we find that the naïve successional dental lamina in zebrafish expresses a battery of nine genes (bmpr1aa, bmp6, cd34, gli1, igfbp5a, lgr4, lgr6, nfatc1, and pitx2), while active Wnt signaling and Lef1 expression occur during early morphogenesis stages of tooth development. We also find that, despite the absence of a histologically distinct successional dental lamina in stickleback tooth fields, the same battery of nine genes (Bmpr1a, Bmp6, CD34, Gli1, Igfbp5a, Lgr4, Lgr6, Nfatc1, and Pitx2) are expressed in the basalmost endodermal cell layer, which is the region most closely associated with replacement tooth germs. Like zebrafish, stickleback replacement tooth germs additionally express Lef1 and exhibit active Wnt signaling. Thus, two fish systems that either have an organized successional dental lamina (zebrafish) or lack a morphologically distinct successional dental lamina (sticklebacks) deploy similar genetic programs during tooth regeneration.</p><p><strong>Conclusions: </strong>We propose that the expression domains described here delineate a highly conserved \"successional dental epithelium\" (SDE). Furthermore, a set of orthologous genes is known to mark hair follicle epithelial stem cells in mice, suggesting that regenerative systems in other epithelial appendages may utilize a related epithelial progenitor cell type, despite the highly derived nature of the resulting functional organs.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":null,"pages":null},"PeriodicalIF":4.1,"publicationDate":"2021-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995769/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25516971","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Post-metamorphic skeletal growth in the sea urchin Paracentrotus lividus and implications for body plan evolution. 海胆(Paracentrotus lividus)的后变质骨骼生长及其对体型进化的影响。
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-03-16 DOI: 10.1186/s13227-021-00174-1
Jeffrey R Thompson, Periklis Paganos, Giovanna Benvenuto, Maria Ina Arnone, Paola Oliveri

Background: Understanding the molecular and cellular processes that underpin animal development are crucial for understanding the diversity of body plans found on the planet today. Because of their abundance in the fossil record, and tractability as a model system in the lab, skeletons provide an ideal experimental model to understand the origins of animal diversity. We herein use molecular and cellular markers to understand the growth and development of the juvenile sea urchin (echinoid) skeleton.

Results: We developed a detailed staging scheme based off of the first ~ 4 weeks of post-metamorphic life of the regular echinoid Paracentrotus lividus. We paired this scheme with immunohistochemical staining for neuronal, muscular, and skeletal tissues, and fluorescent assays of skeletal growth and cell proliferation to understand the molecular and cellular mechanisms underlying skeletal growth and development of the sea urchin body plan.

Conclusions: Our experiments highlight the role of skeletogenic proteins in accretionary skeletal growth and cell proliferation in the addition of new metameric tissues. Furthermore, this work provides a framework for understanding the developmental evolution of sea urchin body plans on macroevolutionary timescales.

背景:了解支撑动物发育的分子和细胞过程对于理解当今地球上发现的身体结构的多样性至关重要。由于它们在化石记录中的丰富,以及在实验室中作为模型系统的可追溯性,骨骼为理解动物多样性的起源提供了理想的实验模型。本文利用分子和细胞标记来了解海胆幼体骨骼的生长发育情况。结果:我们建立了一个详细的分期方案,该方案是基于正常刺针样动物的前~ 4周变质后的生活。我们将该方案与神经元、肌肉和骨骼组织的免疫组织化学染色以及骨骼生长和细胞增殖的荧光测定相结合,以了解海胆体计划骨骼生长和发育的分子和细胞机制。结论:我们的实验强调了成骨蛋白在骨骼增生和细胞增殖中的作用。此外,本研究为理解海胆体计划在宏观进化时间尺度上的发育演化提供了一个框架。
{"title":"Post-metamorphic skeletal growth in the sea urchin Paracentrotus lividus and implications for body plan evolution.","authors":"Jeffrey R Thompson,&nbsp;Periklis Paganos,&nbsp;Giovanna Benvenuto,&nbsp;Maria Ina Arnone,&nbsp;Paola Oliveri","doi":"10.1186/s13227-021-00174-1","DOIUrl":"https://doi.org/10.1186/s13227-021-00174-1","url":null,"abstract":"<p><strong>Background: </strong>Understanding the molecular and cellular processes that underpin animal development are crucial for understanding the diversity of body plans found on the planet today. Because of their abundance in the fossil record, and tractability as a model system in the lab, skeletons provide an ideal experimental model to understand the origins of animal diversity. We herein use molecular and cellular markers to understand the growth and development of the juvenile sea urchin (echinoid) skeleton.</p><p><strong>Results: </strong>We developed a detailed staging scheme based off of the first ~ 4 weeks of post-metamorphic life of the regular echinoid Paracentrotus lividus. We paired this scheme with immunohistochemical staining for neuronal, muscular, and skeletal tissues, and fluorescent assays of skeletal growth and cell proliferation to understand the molecular and cellular mechanisms underlying skeletal growth and development of the sea urchin body plan.</p><p><strong>Conclusions: </strong>Our experiments highlight the role of skeletogenic proteins in accretionary skeletal growth and cell proliferation in the addition of new metameric tissues. Furthermore, this work provides a framework for understanding the developmental evolution of sea urchin body plans on macroevolutionary timescales.</p>","PeriodicalId":49076,"journal":{"name":"Evodevo","volume":null,"pages":null},"PeriodicalIF":4.1,"publicationDate":"2021-03-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13227-021-00174-1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25484584","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Among the shapeshifters: parasite-induced morphologies in ants (Hymenoptera, Formicidae) and their relevance within the EcoEvoDevo framework. 在变形者中:寄生虫诱导的蚂蚁形态(膜翅目,蚁科)及其在EcoEvoDevo框架内的相关性。
IF 4.1 2区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2021-03-02 DOI: 10.1186/s13227-021-00173-2
Alice Laciny

As social insects, ants represent extremely interaction-rich biological systems shaped by tightly integrated social structures and constant mutual exchange with a multitude of internal and external environmental factors. Due to this high level of ecological interconnection, ant colonies can harbour a diverse array of parasites and pathogens, many of which are known to interfere with the delicate processes of ontogeny and caste differentiation and induce phenotypic changes in their hosts. Despite their often striking nature, parasite-induced changes to host development and morphology have hitherto been largely overlooked in the context of ecological evolutionary developmental biology (EcoEvoDevo). Parasitogenic morphologies in ants can, however, serve as "natural experiments" that may shed light on mechanisms and pathways relevant to host development, plasticity or robustness under environmental perturbations, colony-level effects and caste evolution. By assessing case studies of parasites causing morphological changes in their ant hosts, from the eighteenth century to current research, this review article presents a first overview of relevant host and parasite taxa. Hypotheses about the underlying developmental and evolutionary mechanisms, and open questions for further research are discussed. This will contribute towards highlighting the importance of parasites of social insects for both biological theory and empirical research and facilitate future interdisciplinary work at the interface of myrmecology, parasitology, and the EcoEvoDevo framework.

蚂蚁作为群居昆虫,是由紧密结合的社会结构和与众多内外环境因素的不断相互交换所形成的相互作用极其丰富的生物系统。由于这种高度的生态互联,蚁群可以庇护各种各样的寄生虫和病原体,其中许多已知会干扰个体发生和等级分化的微妙过程,并诱导宿主的表型变化。尽管它们通常具有惊人的性质,但迄今为止,在生态进化发育生物学的背景下,寄生虫引起的宿主发育和形态变化在很大程度上被忽视了(EcoEvoDevo)。然而,蚂蚁的寄生形态可以作为“自然实验”,揭示与宿主发育、环境扰动下的可塑性或稳健性、群体水平效应和种姓进化相关的机制和途径。本文通过对寄生虫引起蚂蚁宿主形态变化的案例研究,从18世纪到目前的研究,对相关宿主和寄生虫分类群进行了初步综述。对潜在的发育和进化机制的假设,以及有待进一步研究的开放性问题进行了讨论。这将有助于强调群居昆虫寄生虫对生物学理论和实证研究的重要性,并促进未来在昆虫学、寄生虫学和EcoEvoDevo框架界面上的跨学科工作。
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引用次数: 6
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