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Targeting stress induction of GRP78 by cardiac glycoside oleandrin dually suppresses cancer and COVID-19. 强心苷 oleandrin 针对 GRP78 的应激诱导可同时抑制癌症和 COVID-19。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-06 DOI: 10.1186/s13578-024-01297-3
Dat P Ha, Woo-Jin Shin, Ze Liu, Michael E Doche, Roy Lau, Nektaria Maria Leli, Crystal S Conn, Mariangela Russo, Annalisa Lorenzato, Constantinos Koumenis, Min Yu, Shannon M Mumenthaler, Amy S Lee

Background: Despite recent therapeutic advances, combating cancer resistance remains a formidable challenge. The 78-kilodalton glucose-regulated protein (GRP78), a key stress-inducible endoplasmic reticulum (ER) chaperone, plays a crucial role in both cancer cell survival and stress adaptation. GRP78 is also upregulated during SARS-CoV-2 infection and acts as a critical host factor. Recently, we discovered cardiac glycosides (CGs) as novel suppressors of GRP78 stress induction through a high-throughput screen of clinically relevant compound libraries. This study aims to test the possibility that agents capable of blocking stress induction of GRP78 could dually suppress cancer and COVID-19.

Results: Here we report that oleandrin (OLN), is the most potent among the CGs in inhibiting acute stress induction of total GRP78, which also results in reduced cell surface and nuclear forms of GRP78 in stressed cells. The inhibition of stress induction of GRP78 is at the post-transcriptional level, independent of protein degradation and autophagy and may involve translational control as OLN blocks stress-induced loading of ribosomes onto GRP78 mRNAs. Moreover, the human Na+/K+-ATPase α3 isoform is critical for OLN suppression of GRP78 stress induction. OLN, in nanomolar range, enhances apoptosis, sensitizes colorectal cancer cells to chemotherapeutic agents, and reduces the viability of patient-derived colon cancer organoids. Likewise, OLN, suppresses GRP78 expression and impedes tumor growth in an orthotopic breast cancer xenograft model. Furthermore, OLN blocks infection by SARS-CoV-2 and its variants and enhances existing anti-viral therapies. Notably, GRP78 overexpression mitigates OLN-mediated cancer cell apoptotic onset and suppression of virus release.

Conclusion: Our findings validate GRP78 as a target of OLN anti-cancer and anti-viral activities. These proof-of-principle studies support further investigation of OLN as a readily accessible compound to dually combat cancer and COVID-19.

背景:尽管最近在治疗方面取得了进展,但抗击癌症耐药性仍然是一项艰巨的挑战。78千道尔顿葡萄糖调节蛋白(GRP78)是一种关键的应激诱导型内质网(ER)伴侣蛋白,在癌细胞存活和应激适应中发挥着关键作用。在 SARS-CoV-2 感染期间,GRP78 也会上调,并作为一种关键的宿主因子发挥作用。最近,我们通过对临床相关化合物库进行高通量筛选,发现强心苷(CGs)是一种新型的 GRP78 应激诱导抑制剂。本研究旨在检验能够阻断 GRP78 应激诱导的药物是否可以同时抑制癌症和 COVID-19:结果:我们在此报告,齐墩果素(OLN)是抑制急性应激诱导总 GRP78 的 CGs 中最有效的一种,它还能减少应激细胞中 GRP78 的细胞表面和细胞核形式。对 GRP78 应激诱导的抑制是在转录后水平上进行的,与蛋白质降解和自噬无关,而且可能涉及翻译控制,因为 OLN 会阻止应激诱导的核糖体加载到 GRP78 mRNA 上。此外,人类 Na+/K+-ATPase α3异构体对OLN抑制GRP78应激诱导至关重要。纳摩尔范围内的 OLN 可增强细胞凋亡,使结直肠癌细胞对化疗药物敏感,并降低源自患者的结肠癌器官组织的存活率。同样,OLN 也能抑制 GRP78 的表达,并阻碍正位乳腺癌异种移植模型中肿瘤的生长。此外,OLN 还能阻止 SARS-CoV-2 及其变种的感染,并增强现有的抗病毒疗法。值得注意的是,GRP78的过表达减轻了OLN介导的癌细胞凋亡和病毒释放抑制:我们的研究结果验证了 GRP78 是 OLN 抗癌和抗病毒活性的靶点。这些原理性研究支持进一步研究 OLN,将其作为一种易于获得的化合物,以同时对抗癌症和 COVID-19。
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引用次数: 0
YIPF2 regulates genome integrity. YIPF2 可调节基因组的完整性。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-05 DOI: 10.1186/s13578-024-01300-x
Xiao Zhang, Tao Wang

Understanding of the mechanisms for genome integrity maintenance can help in developing effective intervention strategies to combat aging. A whole-genome RNAi screen was conducted to identify novel factors involved in maintaining genome stability. The potential target genes identified in the screening are related to the cell cycle, proteasome, and spliceosomes. Unexpectedly, the Golgi protein YIPF2 has been found to play a critical role in maintaining genome stability. The depletion of YIPF2 hinders the process of homologous recombination (HR) repair, which then triggers DNA damage response mechanisms, ultimately leading to cellular senescence. The overexpression of YIPF2 facilitated cellular recovery from DNA damage induced by chemotherapy agents or replicative senescence-associated DNA damage. Our findings indicate that only the intact Golgi apparatus containing YIPF2 provides a protective effect on genome integrity.

了解基因组完整性的维持机制有助于制定有效的干预策略来对抗衰老。我们进行了全基因组 RNAi 筛选,以确定参与维持基因组稳定性的新因素。筛选出的潜在靶基因与细胞周期、蛋白酶体和剪接体有关。意外的是,研究发现高尔基体蛋白 YIPF2 在维持基因组稳定性方面起着关键作用。YIPF2的耗竭会阻碍同源重组(HR)修复过程,进而引发DNA损伤反应机制,最终导致细胞衰老。过表达YIPF2有助于细胞从化疗药物诱导的DNA损伤或复制衰老相关的DNA损伤中恢复。我们的研究结果表明,只有含有YIPF2的完整高尔基体才能对基因组完整性起到保护作用。
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引用次数: 0
Role of extracellular vesicle-associated proteins in the progression, diagnosis, and treatment of hepatocellular carcinoma. 细胞外囊泡相关蛋白在肝细胞癌的发展、诊断和治疗中的作用。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-03 DOI: 10.1186/s13578-024-01294-6
Yao-Ge Liu, Shi-Tao Jiang, Jun-Wei Zhang, Han Zheng, Lei Zhang, Hai-Tao Zhao, Xin-Ting Sang, Yi-Yao Xu, Xin Lu

Hepatocellular carcinoma (HCC) is the most common type of primary liver cancer, characterized by difficulties in early diagnosis, prone to distant metastasis, and high recurrence rates following surgery. Extracellular vesicles (EVs) are a class of cell-derived particles, including exosomes, characterized by a phospholipid bilayer. They serve as effective carriers for intercellular communication cargo, including proteins and nucleic acids, and are widely involved in tumor progression. They are being explored as potential tumor biomarkers and novel therapeutic avenues. We provide a brief overview of the biogenesis and characteristics of EVs to better understand their classification standards. The focus of this review is on the research progress of EV-associated proteins in the field of HCC. EV-associated proteins are involved in tumor growth and regulation in HCC, participate in intercellular communication within the tumor microenvironment (TME), and are implicated in events including angiogenesis and epithelial-mesenchymal transition (EMT) during tumor metastasis. In addition, EV-associated proteins show promising diagnostic efficacy for HCC. For the treatment of HCC, they also demonstrate significant potential including enhancing the efficacy of tumor vaccines, and as targeting cargo anchors. Facing current challenges, we propose the future directions of research in this field. Above all, research on EV-associated proteins offers the potential to enhance our comprehension of HCC and offer novel insights for developing new treatment strategies.

肝细胞癌(HCC)是最常见的原发性肝癌,其特点是难以早期诊断、易发生远处转移以及手术后复发率高。细胞外囊泡(EVs)是一类细胞衍生颗粒,包括外泌体,其特点是具有磷脂双分子层。它们是细胞间通信货物(包括蛋白质和核酸)的有效载体,广泛参与肿瘤的进展。人们正在探索将它们作为潜在的肿瘤生物标志物和新型治疗途径。我们简要概述了 EVs 的生物生成和特征,以便更好地理解其分类标准。本综述的重点是 EV 相关蛋白在 HCC 领域的研究进展。EV相关蛋白参与了HCC的肿瘤生长和调控,参与了肿瘤微环境(TME)中的细胞间通讯,并与肿瘤转移过程中的血管生成和上皮-间质转化(EMT)等事件有关。此外,EV 相关蛋白对诊断 HCC 有很好的疗效。在治疗 HCC 方面,它们也显示出巨大的潜力,包括提高肿瘤疫苗的疗效,以及作为靶向货物锚。面对当前的挑战,我们提出了该领域未来的研究方向。最重要的是,对 EV 相关蛋白的研究有可能增强我们对 HCC 的理解,并为开发新的治疗策略提供新的见解。
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引用次数: 0
Deubiquitinase USP10 promotes osteosarcoma autophagy and progression through regulating GSK3β-ULK1 axis. 去泛素化酶USP10通过调节GSK3β-ULK1轴促进骨肉瘤的自噬和进展
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-02 DOI: 10.1186/s13578-024-01291-9
Zuxi Feng, Yanghuan Ou, Xueqiang Deng, Minghao Deng, Xiaohua Yan, Leifeng Chen, Fan Zhou, Liang Hao

Background: Deubiquitinating enzymes (DUBs) are pivotal in maintaining cell homeostasis by regulating substrate protein ubiquitination in both healthy and cancer cells. Ubiquitin-specific protease 10 (USP10) belongs to the DUB family. In this study, we investigated the clinical and pathological significance of USP10 and Unc-51-like autophagy activating kinase 1 (ULK1) in osteosarcoma (OS), as well as the mechanism of USP10 action in ULK1-mediated autophagy and disease progression.

Results: The analysis of OS and adjacent normal tissues demonstrated that USP10 and ULK1 were significantly overexpressed in OS, and a positive association between their expression and malignant properties was observed. USP10 knockdown in OS cells reduced ULK1 mRNA and protein expression, whereas USP10 overexpression increased ULK1 mRNA and protein expression. In vitro experiments showed that USP10 induced autophagy, cell proliferation, and invasion by enhancing ULK1 expression in OS cell lines. Furthermore, we found that the regulation of ULK1-mediated autophagy, cell proliferation, and invasion in OS by USP10 was dependent on glycogen synthase kinase 3β (GSK3β) activity. Mechanistically, USP10 promoted ULK1 transcription by interacting with and stabilising GSK3β through deubiquitination, which, in turn, increased the activity of the ULK1 promoter, thereby accelerating OS progression. Using a xenograft mouse model, we showed that Spautin-1, a small-molecule inhibitor targeting USP10, significantly reduced OS development, with its anti-tumour activity significantly enhanced when combined with the chemotherapeutic agent cisplatin.

Conclusion: Collectively, we demonstrated that the USP10-GSK3β-ULK1 axis promoted autophagy, cell proliferation, and invasion in OS. The findings imply that targeting USP10 may offer a promising therapeutic avenue for treating OS.

背景:去泛素化酶(DUB)通过调节健康细胞和癌细胞中底物蛋白的泛素化,在维持细胞稳态方面发挥着关键作用。泛素特异性蛋白酶 10(USP10)属于 DUB 家族。本研究探讨了USP10和Unc-51样自噬激活激酶1(ULK1)在骨肉瘤(OS)中的临床和病理意义,以及USP10在ULK1介导的自噬和疾病进展中的作用机制:结果:对骨肉瘤和邻近正常组织的分析表明,USP10和ULK1在骨肉瘤中显著过表达,且其表达与恶性程度呈正相关。USP10 在 OS 细胞中敲除会降低 ULK1 mRNA 和蛋白的表达,而 USP10 过表达则会增加 ULK1 mRNA 和蛋白的表达。体外实验表明,USP10 通过增强 OS 细胞系中 ULK1 的表达,诱导自噬、细胞增殖和侵袭。此外,我们还发现 USP10 对 OS 中 ULK1 介导的自噬、细胞增殖和侵袭的调控依赖于糖原合酶激酶 3β (GSK3β) 的活性。从机制上讲,USP10通过与GSK3β相互作用并通过去泛素化稳定GSK3β,从而促进ULK1的转录,反过来又增加了ULK1启动子的活性,从而加速了OS的进展。通过异种移植小鼠模型,我们发现靶向 USP10 的小分子抑制剂 Spautin-1 能显著减少 OS 的发展,当与化疗药物顺铂联合使用时,其抗肿瘤活性显著增强:总之,我们证明了 USP10-GSK3β-ULK1 轴促进了 OS 的自噬、细胞增殖和侵袭。这些研究结果表明,以 USP10 为靶点可能会为治疗 OS 提供一条前景广阔的治疗途径。
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引用次数: 0
Single-cell and spatial sequencing identifies senescent and germinal tumor cells in adamantinomatous craniopharyngiomas. 单细胞和空间测序鉴定金刚瘤颅咽管瘤中的衰老和生殖肿瘤细胞。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-02 DOI: 10.1186/s13578-024-01299-1
Xianlong Wang, Jincheng Lin, Hongxing Liu, Chuan Zhao, Zhiwei Tu, Dapeng Xu, En Zhang, Zhongqing Zhou, Xueling Qi, Xingfu Wang, Zhixiong Lin

Adamantinomatous craniopharyngioma (ACP) is a clinically aggressive tumor without effective treatment method. Previous studies proposed a paracrine tumorigenesis model, in which oncogenic β-catenin induces senescence in pituitary stem cells and the senescent cells lead the formation of paracrine tumors through secretion of pro-tumorigenic factors. However, there lacks characterization on senescent cells in ACPs. Here, we profiled 12 ACPs with single-cell RNA and TCR-sequencing to elucidate the cellular atlas in ACPs and 3 of them were also subject to spatial sequencing to localize different subpopulations of the tumor cells. In total, we obtained the transcriptome profiles of 70,682 cells. Tumor cells, which were unambiguously identified through the cellular mutation status of the driver CTNNB1 mutations, were clustered into 6 subsets. The whorl-like cluster (WC) cells show distinct molecular features from the other tumor cells and the palisading epithelium (PE) cells consists of a proliferating subset. Other than typical PE and WC, we identified two novel subpopulations of the tumor cells. In one subpopulation, the cells express a high level of cytokines, e.g., FDCSP and S100A8/A9, and are enriched with the senescence-associated secretory phenotype (SASP) factors. Hematoxylin and eosin staining reveals that these SASP cells lack an ordered structures and their nuclei are elongated. In the other subpopulation, the cell sizes are small and they are tightly packed together with an unusual high density expressing a high level of mitochondrial genes (median 10.9%). These cells are the origin of the tumor developmental trajectories revealed by RNA velocity and pseudo-time analysis. Single-cell RNA and TCR analysis reveals that some ACPs are infiltrated with clonally expanded cytotoxic T cells. We propose a hypothesis that WC and PE are formed via different negative regulation mechanisms of the overactivated WNT/β-catenin signaling which provides a new understanding on the tumorigenesis of ACPs. The study lays a foundation for future studies on targeting senescent cells in ACPs with senolytic compounds or other therapeutic agents.

金刚瘤性颅咽管瘤(Adamantinomatous craniopharyngioma,ACP)是一种临床侵袭性肿瘤,目前尚无有效的治疗方法。以往的研究提出了一种旁分泌型肿瘤发生模型,即致癌物质β-catenin诱导垂体干细胞衰老,衰老细胞通过分泌促肿瘤因子形成旁分泌型肿瘤。然而,目前还缺乏关于ACP中衰老细胞的特征描述。在这里,我们用单细胞 RNA 和 TCR 测序分析了 12 例 ACP,以阐明 ACP 中的细胞图谱,其中 3 例还进行了空间测序,以定位肿瘤细胞的不同亚群。我们总共获得了 70,682 个细胞的转录组图谱。通过驱动 CTNNB1 突变的细胞突变状态明确识别的肿瘤细胞被分为 6 个亚群。轮状集群(WC)细胞显示出与其他肿瘤细胞截然不同的分子特征,而棕榈状上皮(PE)细胞则由一个增殖亚群组成。除了典型的 PE 和 WC,我们还发现了两个新的肿瘤细胞亚群。在一个亚群中,细胞表达大量细胞因子,如 FDCSP 和 S100A8/A9,并富含衰老相关分泌表型(SASP)因子。血色素和伊红染色显示,这些 SASP 细胞缺乏有序结构,细胞核拉长。在另一个亚群中,细胞体积较小,紧密地排列在一起,线粒体基因表达异常密集(中位数为 10.9%)。这些细胞是 RNA 速度和伪时间分析所揭示的肿瘤发生轨迹的起源。单细胞 RNA 和 TCR 分析显示,一些 ACP 被克隆扩增的细胞毒性 T 细胞浸润。我们提出了一个假设,即WC和PE是通过过度激活的WNT/β-catenin信号的不同负调控机制形成的,这为ACPs的肿瘤发生提供了新的认识。该研究为今后利用衰老溶解化合物或其他治疗药物靶向 ACPs 中衰老细胞的研究奠定了基础。
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引用次数: 0
V1bR enhances glucose-stimulated insulin secretion by paracrine production of glucagon which activates GLP-1 receptor. V1bR 通过旁分泌胰高血糖素来激活 GLP-1 受体,从而增强葡萄糖刺激的胰岛素分泌。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-31 DOI: 10.1186/s13578-024-01288-4
Ying Yun, Shimeng Guo, Xin Xie

Background: Arginine vasopressin (AVP) has been reported to regulate insulin secretion and glucose homeostasis in the body. Previous study has shown that AVP and its receptor V1bR modulate insulin secretion via the hypothalamic-pituitary-adrenal axis. AVP has also been shown to enhance insulin secretion in islets, but the exact mechanism remains unclear.

Results: In our study, we unexpectedly discovered that AVP could only stimulates insulin secretion from islets, but not β cells, and AVP-induced insulin secretion could be blocked by V1bR selective antagonist. Single-cell transcriptome analysis identified that V1bR is only expressed by the α cells. Further studies indicated that activation of the V1bR stimulates the α cells to secrete glucagon, which then promotes glucose-dependent insulin secretion from β cells in a paracrine way by activating GLP-1R but not GCGR on these cells.

Conclusions: Our study revealed a crosstalk between α and β cells initiated by AVP/V1bR and mediated by glucagon/GLP-1R, providing a mechanism to develop new glucose-controlling therapies targeting V1bR.

背景:据报道,精氨酸加压素(AVP)可调节体内胰岛素分泌和葡萄糖稳态。以往的研究表明,AVP 及其受体 V1bR 可通过下丘脑-垂体-肾上腺轴调节胰岛素分泌。研究结果表明,AVP 也能增强胰岛分泌胰岛素,但其确切机制尚不清楚:结果:我们的研究意外地发现,AVP只能刺激胰岛分泌胰岛素,而不能刺激β细胞分泌胰岛素,而且V1bR选择性拮抗剂能阻断AVP诱导的胰岛素分泌。单细胞转录组分析发现,V1bR 仅在α细胞中表达。进一步研究表明,激活 V1bR 可刺激α细胞分泌胰高血糖素,然后通过激活这些细胞上的 GLP-1R 而非 GCGR,以旁分泌方式促进β细胞分泌葡萄糖依赖性胰岛素:我们的研究揭示了由 AVP/V1bR 启动并由胰高血糖素/GLP-1R 介导的 α 和 β 细胞之间的串联,为开发针对 V1bR 的新葡萄糖控制疗法提供了一种机制。
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引用次数: 0
MST1R-targeted therapy in the battle against gallbladder cancer. 抗击胆囊癌的 MST1R 靶向疗法。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-29 DOI: 10.1186/s13578-024-01290-w
Wei Wang, Chao Huang, Li Zhang, Liqin Yu, Yangming Liu, Puxiongzhi Wang, Rongmu Xia

Background: Gallbladder cancer (GBC) is characterized by high mortality rate. Our study sought therapeutic candidates for GBC.

Results: Bioinformatics analysis identified significant upregulation of MST1R in GBC. In vitro experiments demonstrated that the MST1R inhibitor MGCD-265 effectively restrained GBC cell proliferation at lower concentrations. Additionally, it induced cycle arrest and apoptosis in GBC cells in a dose-dependent manner. Mouse models exhibited that MGCD-265 treatment significantly diminished the proliferative capacity of GBC-SD cells. Transcriptomics sequencing revealed significant transcriptome alterations, with 200 transcripts upregulated and 883 downregulated. KEGG and GO analyses highlighted enrichment in processes like cell adhesion and pathways such as protein digestion and absorption. Downstream genes analysis identified JMJD6 upregulation post-MGCD-265 treatment. In vivo experiments confirmed that combining MGCD-265 with the JMJD6 inhibitor SKLB325 enhanced the anticancer effect against GBC.

Conclusion: Overall, targeting MST1R and its downstream genes, particularly combining MGCD-265 with SKLB325, holds promise as a therapeutic strategy for GBC.

背景:胆囊癌(GBC)的特点是死亡率高。我们的研究旨在寻找治疗 GBC 的候选药物:生物信息学分析发现 MST1R 在 GBC 中显著上调。体外实验表明,MST1R抑制剂MGCD-265在较低浓度下可有效抑制GBC细胞增殖。此外,它还能以剂量依赖的方式诱导 GBC 细胞周期停滞和凋亡。小鼠模型显示,MGCD-265 能显著降低 GBC-SD 细胞的增殖能力。转录组学测序揭示了转录组的显著改变,其中200个转录本上调,883个下调。KEGG和GO分析强调了细胞粘附等过程和蛋白质消化吸收等通路的富集。下游基因分析发现 JMJD6 在 MGCD-265 处理后上调。体内实验证实,将MGCD-265与JMJD6抑制剂SKLB325结合使用可增强对GBC的抗癌效果:总之,靶向 MST1R 及其下游基因,尤其是将 MGCD-265 与 SKLB325 结合使用,有望成为 GBC 的一种治疗策略。
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引用次数: 0
Organoid as a promising tool for primary liver cancer research: a comprehensive review. 有机体作为原发性肝癌研究的一种有前途的工具:全面综述。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-27 DOI: 10.1186/s13578-024-01287-5
Xuekai Hu, Jiayun Wei, Pinyan Liu, Qiuxia Zheng, Yue Zhang, Qichen Zhang, Jia Yao, Jingman Ni

Primary liver cancer (PLC) is one of the most common malignant gastrointestinal tumors worldwide. Limited by the shortage of liver transplantation donors and the heterogeneity of tumors, patients with liver cancer lack effective treatment options, which leads to rapid progression and metastasis. Currently, preclinical models of PLC fall short of clinical reality and are limited in their response to disease progression and the effectiveness of drug therapy. Organoids are in vitro three-dimensional cultured preclinical models with a high degree of heterogeneity that preserve the histomorphological and genomic features of primary tumors. Liver cancer organoids have been widely used for drug screening, new target discovery, and precision medicine; thus representing a promising tool to study PLC. Here, we summarize the progress of research on liver cancer organoids and their potential application as disease models. This review provides a comprehensive introduction to this emerging technology and offers new ideas for researchers to explore in the field of precision medicine.

原发性肝癌(PLC)是全球最常见的恶性消化道肿瘤之一。受肝移植供体短缺和肿瘤异质性的限制,肝癌患者缺乏有效的治疗方案,导致病情迅速发展和转移。目前,PLC 的临床前模型与临床实际情况相差甚远,对疾病进展的反应和药物治疗的效果都很有限。器官组织是体外三维培养的临床前模型,具有高度异质性,保留了原发肿瘤的组织形态学和基因组学特征。肝癌器官组织已被广泛用于药物筛选、新靶点发现和精准医疗,因此是研究肝癌的一种有前途的工具。在此,我们总结了肝癌器官组织的研究进展及其作为疾病模型的潜在应用。这篇综述全面介绍了这一新兴技术,并为研究人员在精准医学领域的探索提供了新思路。
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引用次数: 0
Insights into the m6A demethylases FTO and ALKBH5 : structural, biological function, and inhibitor development. 洞察 m6A 去甲基化酶 FTO 和 ALKBH5:结构、生物功能和抑制剂开发。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-27 DOI: 10.1186/s13578-024-01286-6
Zewei Gao, Xuan Zha, Min Li, Xueli Xia, Shengjun Wang

N6-methyladenosine (m6A) is dynamically regulated by methyltransferases (termed "writers") and demethylases (referred to as "erasers"), facilitating a reversible modulation. Changes in m6A levels significantly influence cellular functions, such as RNA export from the nucleus, mRNA metabolism, protein synthesis, and RNA splicing. They are intricately associated with a spectrum of pathologies. Moreover, dysregulation of m6A modulation has emerged as a promising therapeutic target across many diseases. m6A plays a pivotal role in controlling vital downstream molecules and critical biological pathways, contributing to the pathogenesis and evolution of numerous conditions. This review provides an overview of m6A demethylases, explicitly detailing the structural and functional characteristics of FTO and ALKBH5. Additionally, we explore their distinct involvement in various diseases, examine factors regulating their expression, and discuss the progress in inhibitor development.

N6-甲基腺苷(m6A)受甲基转移酶(称为 "书写者")和去甲基化酶(称为 "擦除者")的动态调节,从而实现可逆调节。m6A 水平的变化对细胞功能有重大影响,如从细胞核输出 RNA、mRNA 代谢、蛋白质合成和 RNA 剪接。它们与一系列病理现象密切相关。此外,m6A 调控失调已成为许多疾病的治疗靶点。m6A 在控制重要下游分子和关键生物通路方面发挥着关键作用,导致了许多疾病的发病和演变。本综述概述了 m6A 去甲基化酶,明确详述了 FTO 和 ALKBH5 的结构和功能特点。此外,我们还探讨了它们在各种疾病中的不同参与方式,研究了调控它们表达的因素,并讨论了抑制剂开发方面的进展。
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引用次数: 0
Reduction of eEF2 kinase alleviates the learning and memory impairment caused by acrylamide. 减少 eEF2 激酶可减轻丙烯酰胺导致的学习和记忆损伤。
IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-23 DOI: 10.1186/s13578-024-01285-7
Xiao-Li Wang, Ru-Nan Zhang, Yu-Lin Pan, Zhi-Ming Li, Hong-Qiu Li, Ya-Ting Lei, Fang-Fang Zhao, Xiao-Xiao Hao, Wei-Wei Ma, Cui-Ping Yu, Hong-Wei Yao, Xin-Yu Wang, Jun-Jie Lv, Yong-Hui Wu, Sheng-Yuan Wang

Background: The impact of acrylamide (ACR) on learning and memory has garnered considerable attention. However, the targets and mechanisms are still unclear.

Results: Elongation factor 2 (eEF2) was significantly upregulated in the results of serum proteomics. Results from in vitro and in vivo experiments indicated a notable upregulation of Eukaryotic elongation factor 2 kinase (eEF2K), the sole kinase responsible for eEF2 phosphorylation, following exposure to ACR (P < 0.05). Subsequent in vitro experiments using eEF2K siRNA and in vivo experiments with eEF2K-knockout mice demonstrated significant improvements in abnormal indicators related to ACR-induced learning and memory deficits (P < 0.05). Proteomic analysis of the hippocampus revealed Lpcat1 as a crucial downstream protein regulated by eEF2K. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses indicated that eEF2K may play a role in the process of ACR-induced learning and memory impairment by affecting ether lipid metabolism.

Conclusions: In summary, eEF2K as a pivotal treatment target in the mechanisms underlying ACR-induced learning and memory impairment, and studies have shown that it provides robust evidence for potential clinical interventions targeting ACR-induced impairments.

背景:丙烯酰胺(ACR)对学习和记忆的影响引起了广泛关注。然而,其作用靶点和机制仍不清楚:结果:血清蛋白质组学结果显示,延伸因子 2(eEF2)明显上调。体外和体内实验结果表明,暴露于 ACR(P 结论)后,负责 eEF2 磷酸化的唯一激酶真核细胞延伸因子 2 激酶(eEF2K)明显上调:总之,eEF2K 是 ACR 诱导的学习和记忆损伤机制中的一个关键治疗靶点,研究表明它为针对 ACR 诱导的损伤的潜在临床干预措施提供了有力的证据。
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