Ting Liu, Linxi Zhu, Ke Liu, Zhe Liu, Yang Liu, Yifei Zhang, Yue Hu, Qing-Hui Guo, Feihe Huang
An effective route to diameter-controlled single-walled carbon nanotubes (SWCNTs) remains elusive. The use of organic templates to precisely control the diameter of the resulting nanotubes holds great promise in this regard but has hitherto had very limited practical success. A main obstacle is the limited availability of suitable organic templates. Here, we report the diameter-controlled bottom-up synthesis of SWCNTs with elaborately designed [2n]collarenes, hydrocarbon belts consisting of alternating phenylene and 1,4-cyclohexadiene rings, as rigid organic templates. A new approach has been developed to construct these collarenes, which are then used as templates in the bottom-up growth of SWCNTs. The resulting SWCNTs exhibit narrow diameter distributions, matching the diameters of the employed collarene templates. This work greatly propels the synthesis of diameter-controlled SWCNTs.
{"title":"Diameter-Controlled Synthesis of Carbon Nanotubes Using [2<i>n</i>]Collarenes as Rigid Organic Templates.","authors":"Ting Liu, Linxi Zhu, Ke Liu, Zhe Liu, Yang Liu, Yifei Zhang, Yue Hu, Qing-Hui Guo, Feihe Huang","doi":"10.1021/jacs.4c08536","DOIUrl":"https://doi.org/10.1021/jacs.4c08536","url":null,"abstract":"<p><p>An effective route to diameter-controlled single-walled carbon nanotubes (SWCNTs) remains elusive. The use of organic templates to precisely control the diameter of the resulting nanotubes holds great promise in this regard but has hitherto had very limited practical success. A main obstacle is the limited availability of suitable organic templates. Here, we report the diameter-controlled bottom-up synthesis of SWCNTs with elaborately designed [2<i>n</i>]collarenes, hydrocarbon belts consisting of alternating phenylene and 1,4-cyclohexadiene rings, as rigid organic templates. A new approach has been developed to construct these collarenes, which are then used as templates in the bottom-up growth of SWCNTs. The resulting SWCNTs exhibit narrow diameter distributions, matching the diameters of the employed collarene templates. This work greatly propels the synthesis of diameter-controlled SWCNTs.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638037","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
An Ning, Jing Li, Lin Du, Xiaohua Yang, Jiarong Liu, Zhi Yang, Jie Zhong, Alfonso Saiz-Lopez, Ling Liu, Joseph S Francisco, Xiuhui Zhang
Global iodine emissions have been increasing rapidly in recent decades, further influencing the Earth's climate and human health. However, our incomplete understanding of the iodine chemical cycle, especially the fate of higher iodine oxides, introduces substantial uncertainties into atmospheric modeling. I2O3 was previously deemed a "dead end" in iodine chemistry; however, we provide atomic-level evidence that I2O3 can undergo rapid air-water or air-ice interfacial reactions within several picoseconds; these reactions are facilitated by prevalent chemicals on seawater such as amines and halide ions, to produce photolabile reactive iodine species such as HOI and IX (X = I, Br, and Cl). The heterogeneous chemistry of I2O3 leads to the rapid formation of iodate ions (IO3-), which is the predominant soluble iodine and its concentration cannot be well explained by current chemistry. These new loss pathways for atmospheric I2O3 can further explain its absence in field observations and its presence in laboratory experiments; furthermore, these pathways represent a heterogeneous recycling mechanism that can activate the release of reactive iodine from oceans, polar ice/snowpack, or aerosols. Rapid reactive adsorption of I2O3 can also promote the growth of marine aerosols. These findings provide novel insights into iodine geochemical cycling.
{"title":"Heterogenous Chemistry of I<sub>2</sub>O<sub>3</sub> as a Critical Step in Iodine Cycling.","authors":"An Ning, Jing Li, Lin Du, Xiaohua Yang, Jiarong Liu, Zhi Yang, Jie Zhong, Alfonso Saiz-Lopez, Ling Liu, Joseph S Francisco, Xiuhui Zhang","doi":"10.1021/jacs.4c13060","DOIUrl":"https://doi.org/10.1021/jacs.4c13060","url":null,"abstract":"<p><p>Global iodine emissions have been increasing rapidly in recent decades, further influencing the Earth's climate and human health. However, our incomplete understanding of the iodine chemical cycle, especially the fate of higher iodine oxides, introduces substantial uncertainties into atmospheric modeling. I<sub>2</sub>O<sub>3</sub> was previously deemed a \"dead end\" in iodine chemistry; however, we provide atomic-level evidence that I<sub>2</sub>O<sub>3</sub> can undergo rapid air-water or air-ice interfacial reactions within several picoseconds; these reactions are facilitated by prevalent chemicals on seawater such as amines and halide ions, to produce photolabile reactive iodine species such as HOI and IX (X = I, Br, and Cl). The heterogeneous chemistry of I<sub>2</sub>O<sub>3</sub> leads to the rapid formation of iodate ions (IO<sub>3</sub><sup>-</sup>), which is the predominant soluble iodine and its concentration cannot be well explained by current chemistry. These new loss pathways for atmospheric I<sub>2</sub>O<sub>3</sub> can further explain its absence in field observations and its presence in laboratory experiments; furthermore, these pathways represent a heterogeneous recycling mechanism that can activate the release of reactive iodine from oceans, polar ice/snowpack, or aerosols. Rapid reactive adsorption of I<sub>2</sub>O<sub>3</sub> can also promote the growth of marine aerosols. These findings provide novel insights into iodine geochemical cycling.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638038","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Miljan Z Ćorović, Madeleine A Ehweiner, Peter E Hartmann, Felix Sbüll, Ferdinand Belaj, A Daniel Boese, Jesse Lepluart, Martin L Kirk, Nadia C Mösch-Zanetti
Nature chooses a high-valent tungsten center at the active site of the enzyme acetylene hydratase to facilitate acetylene hydration to acetaldehyde. However, the reactions of tungsten-coordinated acetylene are still not well understood, which prevents the development of sustainable bioinspired alkyne hydration catalysts. Here we report the reactivity of two bioinspired tungsten complexes with the acetylene ligand acting as a four-: [W(CO)(C2H2)(PymS)2] (1) and a two-electron donor: [WO(C2H2)(PymS)2] (3), with PMe3 as a nucleophile to simulate the enzyme's reactivity (PymS = 4-(trifluoromethyl)-6-methylpyrimidine-2-thiolate). In dichloromethane, compound 1 was found to react to the cationic carbyne [W≡CCH2PMe3(CO)(PMe3)2(PymS)]Cl (2-Cl) while 3 reacts to the vinyl compound [WO(CH═CHPMe3)(PMe3)3(PymS)]Cl (4-Cl). The formation of the latter follows the common rules applied to η2-alkyne complexes, whereas the carbyne formation was not expected due to the challenging 1,2-H shift. To understand these differences in behavior between seemingly similar acetylene complexes, stepwise addition of the nucleophile in various solvents was investigated by synthetic, spectroscopic, and computational approaches. In this manuscript, we describe that only a four-electron donor acetylene complex can react to the carbyne over the η1-vinyl intermediate and that 1,2-H shift can be assisted by an H-transfer reagent (in this case, the decoordinated PymS ligand). Furthermore, to favor the attack of PMe3 at W coordinated acetylene, the metal center needs to be electron-poor and crowded enough to prevent nucleophile coordination. Finally, the intricate role of the anionic PymS ligand in the vicinity of the first coordination sphere models the potential involvement of amino acid residues during acetylene transformations in AH.
{"title":"Understanding the Carbyne Formation from C<sub>2</sub>H<sub>2</sub> Complexes.","authors":"Miljan Z Ćorović, Madeleine A Ehweiner, Peter E Hartmann, Felix Sbüll, Ferdinand Belaj, A Daniel Boese, Jesse Lepluart, Martin L Kirk, Nadia C Mösch-Zanetti","doi":"10.1021/jacs.4c07724","DOIUrl":"https://doi.org/10.1021/jacs.4c07724","url":null,"abstract":"<p><p>Nature chooses a high-valent tungsten center at the active site of the enzyme acetylene hydratase to facilitate acetylene hydration to acetaldehyde. However, the reactions of tungsten-coordinated acetylene are still not well understood, which prevents the development of sustainable bioinspired alkyne hydration catalysts. Here we report the reactivity of two bioinspired tungsten complexes with the acetylene ligand acting as a four-: [W(CO)(C<sub>2</sub>H<sub>2</sub>)(PymS)<sub>2</sub>] (<b>1</b>) and a two-electron donor: [WO(C<sub>2</sub>H<sub>2</sub>)(PymS)<sub>2</sub>] (<b>3</b>), with PMe<sub>3</sub> as a nucleophile to simulate the enzyme's reactivity (PymS = 4-(trifluoromethyl)-6-methylpyrimidine-2-thiolate). In dichloromethane, compound <b>1</b> was found to react to the cationic carbyne [W≡CCH<sub>2</sub>PMe<sub>3</sub>(CO)(PMe<sub>3</sub>)<sub>2</sub>(PymS)]Cl (<b>2-Cl</b>) while <b>3</b> reacts to the vinyl compound [WO(CH═CHPMe<sub>3</sub>)(PMe<sub>3</sub>)<sub>3</sub>(PymS)]Cl (<b>4-Cl</b>). The formation of the latter follows the common rules applied to η<sup>2</sup>-alkyne complexes, whereas the carbyne formation was not expected due to the challenging 1,2-H shift. To understand these differences in behavior between seemingly similar acetylene complexes, stepwise addition of the nucleophile in various solvents was investigated by synthetic, spectroscopic, and computational approaches. In this manuscript, we describe that only a four-electron donor acetylene complex can react to the carbyne over the η<sup>1</sup>-vinyl intermediate and that 1,2-H shift can be assisted by an H-transfer reagent (in this case, the decoordinated PymS ligand). Furthermore, to favor the attack of PMe<sub>3</sub> at W coordinated acetylene, the metal center needs to be electron-poor and crowded enough to prevent nucleophile coordination. Finally, the intricate role of the anionic PymS ligand in the vicinity of the first coordination sphere models the potential involvement of amino acid residues during acetylene transformations in AH.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638103","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shiqi Wei, Qiongqiong Wan, Shibo Zhou, Wenjing Nie, Suming Chen
Acetonitrile (CH3CN) is considered a very stable molecule in aqueous solutions, and its deprotonation to produce strongly basic -CH2CN requires harsh conditions. CH3CN is also present in the atmosphere, but its chemical transformation pathway at the air-water interface is unknown. In this study, we discovered and verified the unprecedented spontaneous generation of -CH2CN from the CH3CN-H2O solution at the air-water interface of microdroplets, and revealed the indirect deprotonation mechanism of CH3CN by synergistic redox of •OH and electrons in the microdroplets through the capture of key intermediates and computational chemistry. In addition, the dynamic process of indirect deprotonation-protonation was also observed. The high reactivity of -CH2CN in the droplets was revealed via nucleophilic addition to acetone, benzaldehyde, and the parent CH3CN molecule. Furthermore, the -CH2CN generated in the microdroplets underwent a barrier-free nucleophilic addition reaction with CO2 to produce 2-cyanoacetic acid for CO2 fixation. The synergistic redox reaction process revealed in this study provides new insights into microdroplet chemistry, and the distinctive CH3CN reactions identified may provide new clues to unravel the mystery of the CH3CN transformation in the atmospheric environment.
{"title":"Spontaneous Generation of <sup>-</sup>CH<sub>2</sub>CN from Acetonitrile at the Air-Water Interface.","authors":"Shiqi Wei, Qiongqiong Wan, Shibo Zhou, Wenjing Nie, Suming Chen","doi":"10.1021/jacs.4c13013","DOIUrl":"https://doi.org/10.1021/jacs.4c13013","url":null,"abstract":"<p><p>Acetonitrile (CH<sub>3</sub>CN) is considered a very stable molecule in aqueous solutions, and its deprotonation to produce strongly basic <sup>-</sup>CH<sub>2</sub>CN requires harsh conditions. CH<sub>3</sub>CN is also present in the atmosphere, but its chemical transformation pathway at the air-water interface is unknown. In this study, we discovered and verified the unprecedented spontaneous generation of <sup>-</sup>CH<sub>2</sub>CN from the CH<sub>3</sub>CN-H<sub>2</sub>O solution at the air-water interface of microdroplets, and revealed the indirect deprotonation mechanism of CH<sub>3</sub>CN by synergistic redox of <sup>•</sup>OH and electrons in the microdroplets through the capture of key intermediates and computational chemistry. In addition, the dynamic process of indirect deprotonation-protonation was also observed. The high reactivity of <sup>-</sup>CH<sub>2</sub>CN in the droplets was revealed via nucleophilic addition to acetone, benzaldehyde, and the parent CH<sub>3</sub>CN molecule. Furthermore, the <sup>-</sup>CH<sub>2</sub>CN generated in the microdroplets underwent a barrier-free nucleophilic addition reaction with CO<sub>2</sub> to produce 2-cyanoacetic acid for CO<sub>2</sub> fixation. The synergistic redox reaction process revealed in this study provides new insights into microdroplet chemistry, and the distinctive CH<sub>3</sub>CN reactions identified may provide new clues to unravel the mystery of the CH<sub>3</sub>CN transformation in the atmospheric environment.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638089","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jindong Ren, Mowpriya Das, Yuxiang Gao, Ankita Das, Andreas H Schäfer, Harald Fuchs, Shixuan Du, Frank Glorius
Surface modification through the formation of a self-assembled monolayer (SAM) can effectively engineer the physicochemical properties of the surface/material. However, the precise design of multifunctional SAMs at the molecular level is still a major challenge. Here, we jointly use N-heterocyclic carbenes (NHCs) and thiols to form multifunctional hetero-SAM systems that demonstrate excellent chemical stability, electrical conductivity, and, in silico, catalytic activity. This synergistic effect is facilitated by the high surface mobility and electron-rich nature of NHCs, combined with the strong binding strength of thiols. Scanning tunneling microscopy, electrical conductivity, and scanning electron microscope measurements, as well as density functional theory calculations, were employed to explore the synergistic interactions in the supramolecular SAMs. The van der Waals integration of ballbot-type NHCs and thiols enables the SAMs to exhibit both superior surface anticorrosion properties (attributing to the shift in the d-band center) and low surface resistance originating from the band alignment. Moreover, we find that the deposition sequence of flat-lying NHCs and thiols results in SAMs with different configurations, which can further tune the mechanistic pathway in silico in the acetylene hydrogenation process. Our results provide essential molecular insights into the local electronic control of the new SAM/metal interface and the high stability of the emergent multifunctionality (NHC/thiol)-SAMs forming self-assembled lamellae structures in the nanometer regime.
通过形成自组装单层(SAM)对表面进行修饰,可以有效地设计表面/材料的物理化学特性。然而,如何在分子水平上精确设计多功能 SAM 仍是一大挑战。在这里,我们联合使用了 N-杂环碳烯(NHC)和硫醇来形成多功能杂质 SAM 系统,该系统具有出色的化学稳定性、导电性和催化活性。这种协同效应得益于 NHC 的高表面迁移率和富电子性,以及硫醇的强结合力。我们利用扫描隧道显微镜、电导率和扫描电子显微镜测量以及密度泛函理论计算来探索超分子 SAM 中的协同作用。球机器人型 NHC 与硫醇的范德华整合使 SAMs 不仅具有优异的表面防腐性能(归因于 d 波段中心的偏移),而且由于波段排列而具有较低的表面电阻。此外,我们还发现,平躺的 NHC 和硫醇的沉积顺序会产生不同构型的 SAM,这可以进一步调整乙炔氢化过程的硅学机制路径。我们的研究结果为新 SAM/金属界面的局部电子控制以及新出现的多功能(NHC/硫醇)-SAM 在纳米级形成自组装薄片结构的高稳定性提供了重要的分子见解。
{"title":"Cooperative Use of N-Heterocyclic Carbenes and Thiols on a Silver Surface: A Synergetic Approach to Surface Modification.","authors":"Jindong Ren, Mowpriya Das, Yuxiang Gao, Ankita Das, Andreas H Schäfer, Harald Fuchs, Shixuan Du, Frank Glorius","doi":"10.1021/jacs.4c10521","DOIUrl":"https://doi.org/10.1021/jacs.4c10521","url":null,"abstract":"<p><p>Surface modification through the formation of a self-assembled monolayer (SAM) can effectively engineer the physicochemical properties of the surface/material. However, the precise design of multifunctional SAMs at the molecular level is still a major challenge. Here, we jointly use N-heterocyclic carbenes (NHCs) and thiols to form multifunctional hetero-SAM systems that demonstrate excellent chemical stability, electrical conductivity, and, in silico, catalytic activity. This synergistic effect is facilitated by the high surface mobility and electron-rich nature of NHCs, combined with the strong binding strength of thiols. Scanning tunneling microscopy, electrical conductivity, and scanning electron microscope measurements, as well as density functional theory calculations, were employed to explore the synergistic interactions in the supramolecular SAMs. The van der Waals integration of ballbot-type NHCs and thiols enables the SAMs to exhibit both superior surface anticorrosion properties (attributing to the shift in the <i>d</i>-band center) and low surface resistance originating from the band alignment. Moreover, we find that the deposition sequence of flat-lying NHCs and thiols results in SAMs with different configurations, which can further tune the mechanistic pathway in silico in the acetylene hydrogenation process. Our results provide essential molecular insights into the local electronic control of the new SAM/metal interface and the high stability of the emergent multifunctionality (NHC/thiol)-SAMs forming self-assembled lamellae structures in the nanometer regime.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Covalent organic frameworks (COFs) can be developed for molecular confinement and separation. However, their proximate π stacks limit the interlayer distance to be only 3–6 Å, which is too small for guests to enter. As a result, COFs block access to the x–y space and limit guest entry/exit strictly to only the pores along the z direction. Therefore, the extended faces of each layer are hidden between layers, precluding any interactions with guest molecules. Here, we report a strategy for opening interlayer spaces of COFs to attain newly accessible nanospaces between layers. This becomes possible using coordination bonds to replace the conventional π–π stacks between layers. We demonstrate this concept by synthesizing two-dimensional covalent cobalt(II) porphyrin layers through topology-guided polymerization, which were piled up by bidentate axial pillars through coordination bonds with cobalt(II) porphyrin along the z direction, assembling vertically expanded COFs via a one-pot reaction. The resultant frameworks separate the layers with axial pillars and create discrete apertures between layers defined by the molecular length of the pillars. Consequently, the originally inaccessible interlayers are open for guest access, while the polygonal π planes are exposed to trigger various supramolecular interactions. Vapor sorption, breakthrough experiments, and computational studies mutually revealed that the vertically expanded frameworks with optimal interlayer slits induce additional interactions to discriminate benzene and cyclohexane and separate their mixtures efficiently under ambient conditions.
共价有机框架(COFs)可用于分子封闭和分离。然而,它们的近似 π 叠层限制了层间距离只有 3-6 Å,这对于客体进入来说太小了。因此,COF 阻挡了 x-y 空间的进入,将客体的进出严格限制在沿 z 方向的孔隙内。因此,每一层的扩展面都隐藏在层与层之间,排除了与客体分子的任何相互作用。在此,我们报告了一种打开 COF 层间空间的策略,从而在层间获得新的可访问纳米空间。利用配位键取代传统的层间π-π堆栈,这成为可能。我们通过拓扑学引导的聚合反应合成了二维共价卟啉钴(II)层,并通过与卟啉钴(II)沿 z 轴方向的配位键将其堆积成双叉轴柱,通过一锅反应组装成垂直扩展的 COF,从而证明了这一概念。由此形成的框架将具有轴向支柱的层分开,并在层与层之间形成由支柱分子长度定义的离散孔隙。因此,原本无法进入的层间为客体进入打开了通道,而多边形 π 平面则暴露出来,引发了各种超分子相互作用。蒸气吸附、突破实验和计算研究共同表明,具有最佳层间缝隙的垂直扩展框架能诱导额外的相互作用,从而区分苯和环己烷,并在环境条件下有效分离它们的混合物。
{"title":"Vertically Expanded Crystalline Porous Covalent Organic Frameworks","authors":"Shuailei Xie, Matthew A. Addicoat, Donglin Jiang","doi":"10.1021/jacs.4c11880","DOIUrl":"https://doi.org/10.1021/jacs.4c11880","url":null,"abstract":"Covalent organic frameworks (COFs) can be developed for molecular confinement and separation. However, their proximate π stacks limit the interlayer distance to be only 3–6 Å, which is too small for guests to enter. As a result, COFs block access to the <i>x</i>–<i>y</i> space and limit guest entry/exit strictly to only the pores along the <i>z</i> direction. Therefore, the extended faces of each layer are hidden between layers, precluding any interactions with guest molecules. Here, we report a strategy for opening interlayer spaces of COFs to attain newly accessible nanospaces between layers. This becomes possible using coordination bonds to replace the conventional π–π stacks between layers. We demonstrate this concept by synthesizing two-dimensional covalent cobalt(II) porphyrin layers through topology-guided polymerization, which were piled up by bidentate axial pillars through coordination bonds with cobalt(II) porphyrin along the <i>z</i> direction, assembling vertically expanded COFs via a one-pot reaction. The resultant frameworks separate the layers with axial pillars and create discrete apertures between layers defined by the molecular length of the pillars. Consequently, the originally inaccessible interlayers are open for guest access, while the polygonal π planes are exposed to trigger various supramolecular interactions. Vapor sorption, breakthrough experiments, and computational studies mutually revealed that the vertically expanded frameworks with optimal interlayer slits induce additional interactions to discriminate benzene and cyclohexane and separate their mixtures efficiently under ambient conditions.","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":"10 1","pages":""},"PeriodicalIF":15.0,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142637816","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Organic ferroelectrics show great applications in the fields of biomedicine, including disease treatment, biosensors, and tissue engineering. Organosilicon pharmaceutical intermediates generally include chiral centers and have satisfying biosafety, biocompatibility, or even biodegradability, which provide versatile platforms for the design of ferroelectricity. However, their academic values in ferroelectricity have long been long overlooked. Here, we demonstrated the ferroelectric properties of 4-acetoxy-azacyclic butanone (4-AA), a key synthetic organosilicon-based intermediate of carbapenem drugs. This compound undergoes a 222F2-type ferroelectric-ferroelastic phase transition at 326 K. As an organic piezoelectric material, 4-AA can produce reactive oxygen species when subjected to ultrasonic vibrations. Combined with its desirable biocompatibility, this material may contribute to antimicrobial and wound healing, tumor treatment, etc. This work will provide inspiration for the discovery of multifunctional biomedical ferroelectric materials as well as their related application prospects.
{"title":"Observation of Ferroelectricity in Carbapenem Intermediates Enables Reactive Oxygen Species Generation by Ultrasound.","authors":"Xian-Jiang Song, Wenbo Sun, Long-Xing Zhou, Wei-Xin Mao, Hua-Ming Xu, Jin-Fei Lan, Yao Zhang, Han-Yue Zhang","doi":"10.1021/jacs.4c09955","DOIUrl":"https://doi.org/10.1021/jacs.4c09955","url":null,"abstract":"<p><p>Organic ferroelectrics show great applications in the fields of biomedicine, including disease treatment, biosensors, and tissue engineering. Organosilicon pharmaceutical intermediates generally include chiral centers and have satisfying biosafety, biocompatibility, or even biodegradability, which provide versatile platforms for the design of ferroelectricity. However, their academic values in ferroelectricity have long been long overlooked. Here, we demonstrated the ferroelectric properties of 4-acetoxy-azacyclic butanone (4-AA), a key synthetic organosilicon-based intermediate of carbapenem drugs. This compound undergoes a 222F2-type ferroelectric-ferroelastic phase transition at 326 K. As an organic piezoelectric material, 4-AA can produce reactive oxygen species when subjected to ultrasonic vibrations. Combined with its desirable biocompatibility, this material may contribute to antimicrobial and wound healing, tumor treatment, etc. This work will provide inspiration for the discovery of multifunctional biomedical ferroelectric materials as well as their related application prospects.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638039","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Andrew D Steele, Song Meng, Gengnan Li, Edward Kalkreuter, Changsoo Chang, Ben Shen
Polyketide synthases (PKSs) are renowned for the structural diversity of the polyketide natural products they produce, but sulfur-containing functionalities are rarely installed by PKSs. We previously characterized thiocysteine lyase (SH) domains involved in the biosynthesis of the leinamycin (LNM) family of natural products, exemplified by LnmJ-SH and guangnanmycin (GnmT-SH). Here we report a detailed investigation into the PLP-dependent reaction catalyzed by the SH domains, guided by a 1.8 Å resolution crystal structure of GnmT-SH. A series of elaborate substrate mimics were synthesized to answer specific questions garnered from the crystal structure and from the biosynthetic logic of the LNM family of natural products. Through a combination of bioinformatics, molecular modeling, in vitro assays, and mutagenesis, we have developed a detailed model of acyl carrier protein (ACP)-tethered substrate-SH, and interdomain interactions, that contribute to the observed substrate specificity. Comparison of the GnmT-SH structure with archetypical PLP-dependent enzyme structures revealed how Nature, via evolution, has modified a common protein structural motif to accommodate an ACP-tethered substrate, which is significantly larger than any of those previously characterized. Overall, this study demonstrates how PLP-dependent chemistry can be incorporated into the context of PKS assembly lines and sets the stage for engineering PKSs to produce sulfur-containing polyketides.
{"title":"Structural Insights into the Mechanism of a Polyketide Synthase Thiocysteine Lyase Domain.","authors":"Andrew D Steele, Song Meng, Gengnan Li, Edward Kalkreuter, Changsoo Chang, Ben Shen","doi":"10.1021/jacs.4c11656","DOIUrl":"https://doi.org/10.1021/jacs.4c11656","url":null,"abstract":"<p><p>Polyketide synthases (PKSs) are renowned for the structural diversity of the polyketide natural products they produce, but sulfur-containing functionalities are rarely installed by PKSs. We previously characterized thiocysteine lyase (SH) domains involved in the biosynthesis of the leinamycin (LNM) family of natural products, exemplified by LnmJ-SH and guangnanmycin (GnmT-SH). Here we report a detailed investigation into the PLP-dependent reaction catalyzed by the SH domains, guided by a 1.8 Å resolution crystal structure of GnmT-SH. A series of elaborate substrate mimics were synthesized to answer specific questions garnered from the crystal structure and from the biosynthetic logic of the LNM family of natural products. Through a combination of bioinformatics, molecular modeling, in vitro assays, and mutagenesis, we have developed a detailed model of acyl carrier protein (ACP)-tethered substrate-SH, and interdomain interactions, that contribute to the observed substrate specificity. Comparison of the GnmT-SH structure with archetypical PLP-dependent enzyme structures revealed how Nature, via evolution, has modified a common protein structural motif to accommodate an ACP-tethered substrate, which is significantly larger than any of those previously characterized. Overall, this study demonstrates how PLP-dependent chemistry can be incorporated into the context of PKS assembly lines and sets the stage for engineering PKSs to produce sulfur-containing polyketides.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142638100","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jie Chen, Yin-Hui Huang, Jie Yang, Yongxian Huang, Yu-Lin Lu, Zhiwei Jiao, Cheng-Yong Su
The precise asymmetric photochemical transformation of organic compounds containing multiple reactive sites presents significant progress in synthetic chemistry. Herein, we report an unprecedented visible-light-induced cascade transformation of tropolone cyclic triene derivatives by using chiral photoactive metal-organic cages (cPMOCs) as enzyme-mimicking multipocket photocatalysts. The cage-confined photocatalysis promotes three successive elementary steps, i.e., enantioselective [2 + 2] photocycloaddition with chalcone, regio-, and diastereoselective α-ketol rearrangement, and a stereoselective 1,3-acyl shift, resulting in bicyclo[3.2.2]nonane skeleton with multichiral-centers unattainable by other methods. This study demonstrates how complex synthetic challenges of peri-, chemo-, and stereoselectivities could be subtly manipulated by cage-confined supramolecular catalysis for exploration of new reactivities.
{"title":"Unlocking Photocycloaddition Reactivity of Tropolone by Cage-Confined Visible-Light Photocatalysis for Multilevel Selective Transformation.","authors":"Jie Chen, Yin-Hui Huang, Jie Yang, Yongxian Huang, Yu-Lin Lu, Zhiwei Jiao, Cheng-Yong Su","doi":"10.1021/jacs.4c12290","DOIUrl":"https://doi.org/10.1021/jacs.4c12290","url":null,"abstract":"<p><p>The precise asymmetric photochemical transformation of organic compounds containing multiple reactive sites presents significant progress in synthetic chemistry. Herein, we report an unprecedented visible-light-induced cascade transformation of tropolone cyclic triene derivatives by using chiral photoactive metal-organic cages (cPMOCs) as enzyme-mimicking multipocket photocatalysts. The cage-confined photocatalysis promotes three successive elementary steps, <i>i.e</i>., enantioselective [2 + 2] photocycloaddition with chalcone, regio-, and diastereoselective α-ketol rearrangement, and a stereoselective 1,3-acyl shift, resulting in bicyclo[3.2.2]nonane skeleton with multichiral-centers unattainable by other methods. This study demonstrates how complex synthetic challenges of peri-, chemo-, and stereoselectivities could be subtly manipulated by cage-confined supramolecular catalysis for exploration of new reactivities.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142612695","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The interaction between a solid and water at their interface, especially proton transfer, impacts molecular-scale catalysis, macroscopic environmental science, and geoscience. Although being highly desired, directly probing proton transfer between a solid and water is a great challenge, given the subnanometer to nanometer scale of the interface. The fundamental challenge lies in the lack of a measurement tool to sensitively observe local proton concentration without introducing an exogenous electrode or nanoparticle with a minimum size of tens of nanometers. Here, we demonstrate an azo-enhanced Raman scattering strategy to design a 2 nm long small-molecule pH probe with a chelating group anchoring to the solid surface. Empowered by the intramolecular Raman enhancing sensitivity, the probe directly observes proton transfer between water and nanoscale zero-valent iron (nZVI), a famous environmental material for pollution control. This molecular-scale interfacial probing methodology offers a powerful tool to pave the way for advanced environmental and geochemical discernment and management.
{"title":"Azo-Enhanced Raman Scattering Probing Proton Transfer between Water and Nanoscale Zero-valent Iron.","authors":"Weiwei Ma, Yuxin Wang, Ruizhao Wang, Xin Fan, Sicong Ma, Yuchen Tang, Zhihui Ai, Yancai Yao, Lizhi Zhang, Tingjuan Gao","doi":"10.1021/jacs.4c13042","DOIUrl":"https://doi.org/10.1021/jacs.4c13042","url":null,"abstract":"<p><p>The interaction between a solid and water at their interface, especially proton transfer, impacts molecular-scale catalysis, macroscopic environmental science, and geoscience. Although being highly desired, directly probing proton transfer between a solid and water is a great challenge, given the subnanometer to nanometer scale of the interface. The fundamental challenge lies in the lack of a measurement tool to sensitively observe local proton concentration without introducing an exogenous electrode or nanoparticle with a minimum size of tens of nanometers. Here, we demonstrate an azo-enhanced Raman scattering strategy to design a 2 nm long small-molecule pH probe with a chelating group anchoring to the solid surface. Empowered by the intramolecular Raman enhancing sensitivity, the probe directly observes proton transfer between water and nanoscale zero-valent iron (nZVI), a famous environmental material for pollution control. This molecular-scale interfacial probing methodology offers a powerful tool to pave the way for advanced environmental and geochemical discernment and management.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":""},"PeriodicalIF":14.4,"publicationDate":"2024-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142612737","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}