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Semantic Information Theory in a feedback-control Kuramoto Model 反馈控制仓本模型中的语义信息论
Pub Date : 2024-04-02 DOI: arxiv-2404.02221
Damian R Sowinski, Adam Frank, Gourab Ghoshal
Semantic Information Theory (SIT) offers a new approach to evaluating theinformation architecture of complex systems. In this study we describe thesteps required to {it operationalize} SIT via its application to dynamicalproblems. Our road map has four steps: (1) separating the dynamical system intoagent-environment sub-systems; (2) choosing an appropriate coarse graining andquantifying correlations; (3) identifying a measure of viability; (4)implementing a scrambling protocol and measuring the semantic content. We applythe road map to a model inspired by the neural dynamics of epileptic seizureswhereby an agent (a control process) attempts to maintain an environment (abase process) in a desynchronized state. The synchronization dynamics isstudied through the well-known Kuramoto model of phase synchronization. Ourapplication of SIT to this problem reveals new features of both semanticinformation and the Kuramoto model. For the latter we find articulating thecorrelational structure for agent and environment(the oscillators), allows usto cast the model in in a novel computational (information theoretic)perspective, where the agent-environment dynamics can be thought of asanalyzing a communication channel. For the former we find that all theinformation in our system is semantic. This is in contrast to previous SITstudies of foragers in which semantic thresholds where seen above which nofurther semantic content was obtained.
语义信息论(SIT)为评估复杂系统的信息架构提供了一种新方法。在本研究中,我们描述了将 SIT 应用于动态问题所需的步骤。通过将SIT应用于动态问题所需的步骤。我们的路线图有四个步骤:(1)将动态系统分离为人-环境子系统;(2)选择适当的粗粒度并量化相关性;(3)确定可行性度量;(4)实施扰码协议并测量语义内容。我们将路线图应用到一个受癫痫发作神经动力学启发的模型中,在该模型中,代理(控制过程)试图将环境(基础过程)维持在非同步状态。同步动力学通过著名的仓本相位同步模型进行研究。我们将 SIT 应用于这一问题,揭示了语义信息和仓本模型的新特征。对于后者,我们发现将代理和环境(振荡器)的相关结构衔接起来,可以将模型置于一个新颖的计算(信息论)视角中,代理-环境动力学可以被视为对通信通道的分析。对于前者,我们发现我们系统中的所有信息都是语义信息。这与之前对觅食者进行的 SIT 研究形成了鲜明对比,在之前的研究中,我们看到了语义阈值,超过这个阈值就无法获得更多语义内容。
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引用次数: 0
Ghost cycles exhibit increased entrainment and richer dynamics in response to external forcing compared to slow-fast systems 与慢-快系统相比,幽灵循环在响应外部强迫时表现出更强的夹带和更丰富的动力学特征
Pub Date : 2024-03-28 DOI: arxiv-2403.19624
Daniel Koch, Aneta Koseska
Many natural, living and engineered systems display oscillations that arecharacterized by multiple timescales. Typically, such systems are described asslow-fast systems, where the slow dynamics result from a hyperbolic slowmanifold that guides the movement of the system trajectories. Recently, we haveprovided an alternative description in which the slow dynamics result from anon-hyperbolic and Lyapunov-unstable attracting sets from connected dynamicalghosts that form a closed orbit (termed ghost cycles). Here we investigate theresponse properties of both type of systems to external forcing. Using theclassical Van-der-Pol oscillator and two modified versions of this model thatcorrespond to a 1-ghost and a 2-ghost cycle, respectively, we find that ghostcycles are characterized by significant increase especially in the 1:1entrainment regions as demonstrated by the corresponding Arnold tongues andexhibit richer dynamics (bursting, chaos) in contrast to the classicalslow-fast system. Phase plane analysis reveals that these features result fromthe continuous remodeling of the attractor landscape of the ghost cycles modelscharacteristic for non-autonomous systems, whereas the attractor landscape ofthe corresponding slow-fast system remains qualitatively unaltered. We proposethat systems containing ghost cycles display increased flexibility andresponsiveness to continuous environmental changes.
许多自然、生物和工程系统都显示出具有多种时间尺度特征的振荡。通常,这类系统被描述为慢-快系统,其中的慢动力学来自于引导系统轨迹运动的双曲慢模型。最近,我们提供了另一种描述方法,即慢速动力学产生于一个非双曲的、Lyapunov 不稳定的吸引集,吸引集来自相连的动力学幽灵,这些幽灵形成了一个封闭的轨道(称为幽灵循环)。在此,我们研究了这两类系统对外部强迫的响应特性。通过使用经典的范-德尔-波尔振荡器以及该模型的两个修正版本(分别对应于 1 幽灵循环和 2 幽灵循环),我们发现,与经典的慢-快系统相比,幽灵循环的特点是,特别是在 1:1 引力区域内,相应的阿诺德舌头显著增加,并表现出更丰富的动力学特征(迸发、混沌)。相平面分析表明,这些特征源于鬼魂循环模型吸引子景观的不断重塑,而相应的慢-快系统的吸引子景观在本质上保持不变。我们认为,含有幽灵循环的系统对环境的持续变化表现出更高的灵活性和反应能力。
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引用次数: 0
Cluster formation due to repulsive spanning trees in attractively coupled networks 吸引力耦合网络中排斥性生成树导致的集群形成
Pub Date : 2024-03-28 DOI: arxiv-2403.19240
Sayantan Nag Chowdhury, Md Sayeed Anwar, Dibakar Ghosh
Ensembles of coupled nonlinear oscillators are a popular paradigm and anideal benchmark for analyzing complex collective behaviors. The onset ofcluster synchronization is found to be at the core of various technological andbiological processes. The current literature has investigated clustersynchronization by focusing mostly on the case of attractive coupling among theoscillators. However, the case of two coexisting competing interactions is ofpractical interest due to their relevance in diverse natural settings,including neuronal networks consisting of excitatory and inhibitory neurons,the coevolving social model with voters of opposite opinions, ecological plantcommunities with both facilitation and competition, to name a few. In thepresent article, we investigate the impact of repulsive spanning trees oncluster formation within a connected network of attractively coupled limitcycle oscillators. We successfully predict which nodes belong to each clusterand the emergent frustration of the connected networks independent of theparticular local dynamics at the network nodes. We also determine localasymptotic stability of the cluster states using an approach based on theformulation of a master stability function. We additionally validate theemergence of solitary states and antisynchronization for some specific choicesof spanning trees and networks.
耦合非线性振荡器群是一种流行的范例,也是分析复杂集体行为的理想基准。簇同步的发生被认为是各种技术和生物过程的核心。目前的文献对集群同步的研究主要集中在振子之间存在吸引力耦合的情况。然而,由于两种共存的竞争性相互作用在不同的自然环境中具有相关性,因此它们在实践中也很有意义,这些自然环境包括由兴奋性和抑制性神经元组成的神经元网络、意见相反的选民共同发展的社会模型、同时存在促进和竞争的生态植物群落等等。在本文中,我们研究了排斥性生成树对由吸引力耦合极限周期振荡器组成的连接网络中集群形成的影响。我们成功地预测了哪些节点属于每个集群,并预测了连通网络中出现的挫折,而与网络节点的特定局部动力学无关。我们还使用一种基于主稳定函数公式的方法确定了簇状态的局部渐近稳定性。此外,我们还验证了在某些特定的生成树和网络选择下出现的孤态和反同步现象。
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引用次数: 0
Self-organised dynamics beyond scaling of avalanches: Cyclic stress fluctuations in critical sandpiles 超越雪崩规模的自组织动力学:临界砂桩的循环应力波动
Pub Date : 2024-03-23 DOI: arxiv-2403.15859
Bosiljka Tadic, Alexander Shapoval, Mikhail Shnirman
Recognising changes in collective dynamics in complex systems is essentialfor predicting potential events and their development. Possessing intrinsicattractors with laws associated with scale invariance, self-organised criticaldynamics represent a suitable example for quantitatively studying changes incollective behaviour. We consider two prototypal models of self-organisedcriticality, the sandpile automata with deterministic (Bak-Tang-Wiesenfeld) andprobabilistic (Manna model) dynamical rules, focusing on the nature of stressfluctuations induced by driving - adding grains during the avalanchepropagation, and dissipation through avalanches that hit the system boundary.Our analysis of stress evolution time series reveals robust cycles modulated bycollective fluctuations with dissipative avalanches. These modulated cycles aremultifractal within a broad range of time scales. Features of the associatedsingularity spectra capture the differences in the dynamic rules behind theself-organised critical states and their response to the increased drivingrate, altering the process stochasticity and causing a loss of avalanchescaling. In the related sequences of outflow current, the first returndistributions are found to follow modified laws that describe differentpathways to the gradual loss of cooperative behaviour in these two models. Thespontaneous appearance of cycles is another characteristic of self-organisedcriticality. It can also help identify the prominence of self-organisationalphenomenology in an empirical time series when underlying interactions anddriving modes remain hidden.
识别复杂系统中集体动力学的变化对于预测潜在事件及其发展至关重要。自组织临界动力学具有与尺度不变性相关的固有曳光度,是定量研究集体行为变化的合适范例。我们考虑了自组织临界的两个原型模型,即具有确定性(Bak-Tang-Wiesenfeld)和非确定性(Manna 模型)动力学规则的沙堆自动机,重点研究了由驱动力诱发的应力波动的性质--在雪崩传播过程中添加晶粒,以及通过撞击系统边界的雪崩进行耗散。这些被调制的周期在广泛的时间尺度范围内是多分形的。相关稀疏性频谱的特征捕捉到了自组织临界状态背后动态规则的差异,以及它们对增加的驱动力的响应,改变了过程的随机性并导致雪崩尺度的丧失。在相关的流出电流序列中,发现第一返回分布遵循修正的规律,这些规律描述了这两个模型中逐渐丧失合作行为的不同途径。周期的自发出现是自组织临界性的另一个特征。当潜在的相互作用和驱动模式仍被隐藏时,它还有助于识别自组织现象学在经验时间序列中的突出地位。
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引用次数: 0
Cell Motility in Cancer, Crucial Events, Criticality, and Lévy Walks 癌症中的细胞运动、关键事件、临界性和列维漫步
Pub Date : 2024-03-21 DOI: arxiv-2403.14842
Yawer H. Shah, Luigi Palatella, Korosh Mahmoodi, Orazio S. Santonocito, Mariangela Morelli, Gianmarco Ferri, Chiara M. Mazzanti, Paolo Grigolini, Bruce J. West
The analysis of glioblastoma (GB) cell locomotion and its modeling inspiredby Levy random walks is presented herein. We study such walks occurring on atwo-dimensional plane where the walk is similar to the motion of a bird flyingwith a constant velocity, but with random changes of direction in time. Theintelligence of the bird is signaled by the instantaneous changes of flyingdirection, which become invisible in the time series obtained by projecting the2D walk either on the x axis or the y axis. We establish that the projected 1Dtime series share the statistical complexity of time series frequently used tomonitor physiological processes, shedding light on the role of crucial events(CE-s) in pathophysiology. Such CE-s are signified by abrupt changes of flyingdirection which are invisible in the 1D physiological time series. We establisha connection between the complex scaling index delta generated by the CE-sthrough mu_{R} = 2 - delta , where mu_{R} is the inverse power law index ofthe probability density function of the time interval between consecutivefailures of the process of interest. We argue that the identification ofempirical indices along with their theoretical relations afford importantmeasures to control cancer.
本文受列维随机漫步的启发,分析了胶质母细胞瘤(GB)细胞的运动及其建模。我们研究的是发生在二维平面上的随机行走,这种行走类似于鸟类的匀速直线飞行,但在飞行过程中会随机改变方向。鸟的智能通过飞行方向的瞬时变化来体现,而这种变化在将二维行走投影到 x 轴或 y 轴后得到的时间序列中是不可见的。我们发现,投影的一维时间序列与常用来监测生理过程的时间序列具有相同的统计复杂性,从而揭示了关键事件(CE-s)在病理生理学中的作用。这种关键事件的标志是飞行方向的突然改变,而这种改变在一维生理时间序列中是不可见的。我们通过 mu_{R} = 2 - delta 建立了由 CE-sthrough 生成的复缩放指数 delta 之间的联系,其中 mu_{R} 是相关过程连续失败之间时间间隔的概率密度函数的反幂律指数。我们认为,经验指数的确定及其理论关系为控制癌症提供了重要措施。
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引用次数: 0
Network bottlenecks and task structure control the evolution of interpretable learning rules in a foraging agent 网络瓶颈和任务结构控制着觅食机器人可解释学习规则的演化
Pub Date : 2024-03-20 DOI: arxiv-2403.13649
Emmanouil Giannakakis, Sina Khajehabdollahi, Anna Levina
Developing reliable mechanisms for continuous local learning is a centralchallenge faced by biological and artificial systems. Yet, how theenvironmental factors and structural constraints on the learning networkinfluence the optimal plasticity mechanisms remains obscure even for simplesettings. To elucidate these dependencies, we study meta-learning viaevolutionary optimization of simple reward-modulated plasticity rules inembodied agents solving a foraging task. We show that unconstrainedmeta-learning leads to the emergence of diverse plasticity rules. However,regularization and bottlenecks to the model help reduce this variability,resulting in interpretable rules. Our findings indicate that the meta-learningof plasticity rules is very sensitive to various parameters, with thissensitivity possibly reflected in the learning rules found in biologicalnetworks. When included in models, these dependencies can be used to discoverpotential objective functions and details of biological learning viacomparisons with experimental observations.
开发可靠的持续局部学习机制是生物和人工系统面临的核心挑战。然而,环境因素和学习网络的结构限制如何影响最佳可塑性机制,即使是在简单的环境中,也仍然是模糊不清的。为了阐明这些依赖关系,我们研究了在解决觅食任务的本体中通过进化优化简单奖励调制可塑性规则的元学习。我们的研究表明,无约束元学习会导致多种可塑性规则的出现。然而,模型的正则化和瓶颈有助于减少这种可变性,从而产生可解释的规则。我们的研究结果表明,可塑性规则的元学习对各种参数非常敏感,这种敏感性可能反映在生物网络的学习规则中。如果将这些依赖关系纳入模型,就能发现潜在的目标函数以及生物学习与实验观察比较的细节。
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引用次数: 0
Interspecific dispersal constraints suppress pattern formation in metacommunities 种间扩散限制抑制了元群落模式的形成
Pub Date : 2024-03-19 DOI: arxiv-2403.13098
Patrick Lawton, Ashkaan K. Fahimipour, Kurt E. Anderson
Decisions to disperse from a habitat stand out among organismal behaviors aspivotal drivers of ecosystem dynamics across scales. Encounters with otherspecies are an important component of adaptive decision-making in dispersal,resulting in widespread behaviors like tracking resources or avoiding consumersin space. Despite this, metacommunity models often treat dispersal as afunction of intraspecific density alone. We show, focusing initially onthree-species network motifs, that interspecific dispersal rules generallydrive a transition in metacommunities from homogeneous steady states toself-organized heterogeneous spatial patterns. However, when ecologicallyrealistic constraints reflecting adaptive behaviors are imposed -- preytracking and predator avoidance -- a pronounced homogenizing effect emergeswhere spatial pattern formation is suppressed. We demonstrate this effect foreach motif by computing master stability functions that separate thecontributions of local and spatial interactions to pattern formation. We extendthis result to species rich food webs using a random matrix approach, where wefind that eventually webs become large enough to override the homogenizingeffect of adaptive dispersal behaviors, leading once again to predominatelypattern forming dynamics. Our results emphasize the critical role ofinterspecific dispersal rules in shaping spatial patterns across landscapes,highlighting the need to incorporate adaptive behavioral constraints in effortsto link local species interactions and metacommunity structure.
在生物行为中,决定从栖息地扩散的行为是不同尺度生态系统动态的主要驱动因素。与其他物种相遇是散布过程中适应性决策的一个重要组成部分,这导致了广泛的行为,如追踪资源或避开空间中的消费者。尽管如此,元群落模型常常把扩散仅仅作为种内密度的一个函数来处理。我们首先以三物种网络为研究对象,证明种间扩散规则通常会推动元群落从同质稳定状态过渡到自组织的异质空间模式。然而,当施加反映适应性行为的生态学现实约束条件(猎物追踪和捕食者规避)时,空间模式的形成受到抑制,出现了明显的同质化效应。我们通过计算主稳定函数,将局部和空间相互作用对模式形成的贡献区分开来,从而证明了每个图案的这种效应。我们使用随机矩阵方法将这一结果扩展到物种丰富的食物网,结果发现,食物网最终会变得足够大,足以压倒适应性分散行为的同质化效应,从而再次导致以模式形成为主的动力学。我们的研究结果强调了特异性散布规则在形成跨地貌空间模式中的关键作用,突出了将适应性行为约束纳入将本地物种相互作用与元群落结构联系起来的努力中的必要性。
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引用次数: 0
Neural Downscaling for Complex Systems: from Large-scale to Small-scale by Neural Operator 复杂系统的神经降尺度:从大规模到小规模的神经运算器
Pub Date : 2024-03-18 DOI: arxiv-2403.13016
Pengyu Lai, Jing Wang, Rui Wang, Dewu Yang, Haoqi Fei, Hui Xu
Predicting and understanding the chaotic dynamics in complex systems isessential in various applications. However, conventional approaches, whetherfull-scale simulations or small-scale omissions, fail to offer a comprehensivesolution. This instigates exploration into whether modeling or omittingsmall-scale dynamics could benefit from the well-captured large-scale dynamics.In this paper, we introduce a novel methodology called Neural Downscaling (ND),which integrates neural operator techniques with the principles of inertialmanifold and nonlinear Galerkin theory. ND effectively infers small-scaledynamics within a complementary subspace from corresponding large-scaledynamics well-represented in a low-dimensional space. The effectiveness andgeneralization of the method are demonstrated on the complex systems governedby the Kuramoto-Sivashinsky and Navier-Stokes equations. As the firstcomprehensive deterministic model targeting small-scale dynamics, ND shedslight on the intricate spatiotemporal nonlinear dynamics of complex systems,revealing how small-scale dynamics are intricately linked with and influencedby large-scale dynamics.
预测和理解复杂系统中的混沌动力学在各种应用中至关重要。然而,传统方法,无论是全尺度模拟还是忽略小尺度,都无法提供全面的解决方案。在本文中,我们介绍了一种名为神经降尺度(ND)的新方法,它将神经算子技术与惯性manifold 和非线性 Galerkin 理论相结合。ND 可有效地从在低维空间中得到良好体现的相应大尺度动力学推导出互补子空间中的小尺度动力学。在 Kuramoto-Sivashinsky 和 Navier-Stokes 方程所支配的复杂系统中,证明了该方法的有效性和通用性。作为第一个针对小尺度动力学的综合确定性模型,ND 揭示了复杂系统错综复杂的时空非线性动力学,揭示了小尺度动力学如何与大尺度动力学错综复杂地联系在一起并受其影响。
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引用次数: 0
Single file motion of robot swarms 机器人群的单列运动
Pub Date : 2024-03-13 DOI: arxiv-2403.08683
Laciel Alonso-Llanes, Angel Garcimartín, Iker Zuriguel
We present experimental results on the single file motion of a group ofrobots interacting with each other through position sensors. We successfullyreplicate the fundamental diagram typical of these systems, with a transitionfrom free flow to congested traffic as the density of the system increases. Inthe latter scenario we also observe the characteristic stop-and-go waves. Theunique advantages of this novel system, such as experimental stability andrepeatability, allow for extended experimental runs, facilitating acomprehensive statistical analysis of the global dynamics. Above a certaindensity, we observe a divergence of the average jam duration and the averagenumber of robots involved in it. This discovery enables us to preciselyidentify another transition: from congested intermittent flow (for intermediatedensities) to a totally congested scenario for high densities. Beyond thisfinding, the present work demonstrates the suitability of robot swarms to modelcomplex behaviors in many particle systems.
我们展示了一组通过位置传感器相互作用的机器人单列运动的实验结果。我们成功地复制了这些系统的典型基本图,随着系统密度的增加,从自由流动过渡到拥堵交通。在后一种情况下,我们还观察到了特有的走走停停波。这种新型系统的独特优势,如实验稳定性和可重复性,使得我们可以延长实验运行时间,便于对全局动力学进行全面的统计分析。在一定密度以上,我们观察到平均干扰持续时间和参与干扰的机器人平均数量出现了背离。这一发现使我们能够精确识别另一个过渡:从拥堵的间歇流(中间密度)到高密度的完全拥堵场景。除了这一发现之外,本研究还证明了机器人群适用于模拟许多粒子系统中的复杂行为。
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引用次数: 0
Complexified Synchrony 复杂化同步
Pub Date : 2024-03-04 DOI: arxiv-2403.02006
Seungjae Lee, Lucas Braun, Frieder Bönisch, Malte Schröder, Moritz Thümler, Marc Timme
The Kuramoto model and its generalizations have been broadly employed tocharacterize and mechanistically understand various collective dynamicalphenomena, especially the emergence of synchrony among coupled oscillators.Despite almost five decades of research, many questions remain open, inparticular for finite-size systems. Here, we generalize recent work [Phys. Rev.Lett. 130, 187201 (2023)] on the finite-size Kuramoto model with its statevariables analytically continued to the complex domain and also complexify itssystem parameters. Intriguingly, systems of two units with purely imaginarycoupling do not actively synchronize even for arbitrarily large magnitudes ofthe coupling strengths, $|K| rightarrow infty$, but exhibit conservativedynamics with asynchronous rotations or librations for all $|K|$. For genericcomplex coupling, both, traditional phase-locked states and asynchronous statesgeneralize to complex locked states, fixed points off the real subspace thatexist even for arbitrarily weak coupling. We analyze a new collective mode ofrotations exhibiting finite, yet arbitrarily large winding numbers. Numericalsimulations for large networks indicate a novel form of discontinuous phasetransition. We close by pointing to a range of exciting questions for futureresearch.
仓本模型及其广义模型被广泛用于描述和从机理上理解各种集体动力学现象,特别是耦合振荡器之间同步现象的出现。尽管已经进行了近五十年的研究,但许多问题仍然悬而未决,特别是对于有限尺寸系统。在这里,我们将最近关于有限尺寸仓本模型的工作[Phys. Rev.Lett. 130, 187201 (2023)]及其状态变量分析性地延续到复数域,并将其系统参数复杂化。耐人寻味的是,即使耦合强度 $|K| rightarrow infty$为任意大的量级,具有纯粹虚耦合的两个单元系统也不会主动同步,而是在所有 $|K|$ 条件下表现出具有异步旋转或枰动的保守动力学。对于一般的复数耦合,传统的锁相态和异步态都会泛化为复数锁相态,即实子空间的定点,即使对于任意弱的耦合也是存在的。我们分析了一种新的集体旋转模式,它表现出有限但任意大的绕组数。对大型网络的数值模拟表明,这是一种新型的不连续相位转换形式。最后,我们指出了未来研究中一系列令人兴奋的问题。
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引用次数: 0
期刊
arXiv - PHYS - Adaptation and Self-Organizing Systems
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