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The qspec Python package: A physics toolbox for laser spectroscopy qspec Python 软件包:激光光谱物理学工具箱
Pub Date : 2024-09-02 DOI: arxiv-2409.01417
Patrick Müller, Wilfried Nörtershäuser
The analysis of experimental results with Python often requires writing manycode scripts which all need access to the same set of functions. In a commonfield of research, this set will be nearly the same for many users. The qspecPython package was developed to provide functions for physical formulas,simulations and data analysis routines widely used in laser spectroscopy andrelated fields. Most functions are compatible with numpy arrays, enabling fastcalculations with large samples of data. A multidimensional linear regressionalgorithm enables a King plot analyses over multiple atomic transitions. Amodular framework for constructing lineshape models can be used to fit largesets of spectroscopy data. A simulation module within the package providesuser-friendly methods to simulate the coherent time-evolution of atoms inelectro-magnetic fields without the need to explicitly derive a Hamiltonian.
使用 Python 分析实验结果通常需要编写许多代码脚本,这些脚本都需要访问同一组函数。在一个共同的研究领域,这套函数对许多用户来说几乎都是一样的。qspecPython 软件包的开发目的是为激光光谱学及相关领域广泛使用的物理公式、模拟和数据分析例程提供函数。大多数函数都与 numpy 数组兼容,可以快速计算大量数据样本。通过多维线性回归算法,可以对多个原子跃迁进行 King plot 分析。构建线形模型的模块化框架可用于拟合大量光谱数据集。软件包中的一个模拟模块提供了用户友好的方法,用于模拟原子在电磁场中的相干时间演变,而无需明确推导哈密顿。
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引用次数: 0
Data-Efficient Construction of High-Fidelity Graph Deep Learning Interatomic Potentials 高保真图深度学习原子间位势的数据高效构建
Pub Date : 2024-09-02 DOI: arxiv-2409.00957
Tsz Wai Ko, Shyue Ping Ong
Machine learning potentials (MLPs) have become an indispensable tool inlarge-scale atomistic simulations because of their ability to reproduce abinitio potential energy surfaces (PESs) very accurately at a fraction ofcomputational cost. For computational efficiency, the training data for mostMLPs today are computed using relatively cheap density functional theory (DFT)methods such as the Perdew-Burke-Ernzerhof (PBE) generalized gradientapproximation (GGA) functional. Meta-GGAs such as the recently developedstrongly constrained and appropriately normed (SCAN) functional have been shownto yield significantly improved descriptions of atomic interactions fordiversely bonded systems, but their higher computational cost remains animpediment to their use in MLP development. In this work, we outline adata-efficient multi-fidelity approach to constructing Materials 3-body GraphNetwork (M3GNet) interatomic potentials that integrate different levels oftheory within a single model. Using silicon and water as examples, we show thata multi-fidelity M3GNet model trained on a combined dataset of low-fidelity GGAcalculations with 10% of high-fidelity SCAN calculations can achieve accuraciescomparable to a single-fidelity M3GNet model trained on a dataset comprising 8xthe number of SCAN calculations. This work paves the way for the development ofhigh-fidelity MLPs in a cost-effective manner by leveraging existinglow-fidelity datasets.
机器学习势能(MLP)已成为大规模原子模拟中不可或缺的工具,因为它们能够以极低的计算成本非常精确地再现非线性势能面(PES)。为了提高计算效率,目前大多数 MLP 的训练数据都是使用相对便宜的密度泛函理论(DFT)方法计算的,例如 Perdew-Burke-Ernzerhof (PBE) 广义梯度逼近(GGA)函数。元 GGA(如最近开发的强约束和适当规范化(SCAN)函数)已被证明能显著改善对不同键合体系的原子相互作用的描述,但其较高的计算成本仍然是将其用于 MLP 开发的障碍。在这项工作中,我们概述了构建材料三体图网(M3GNet)原子间位势的数据高效多保真度方法,该方法在单一模型中集成了不同层次的理论。我们以硅和水为例,展示了在低保真度 GGA 计算和 10% 高保真 SCAN 计算的组合数据集上训练的多保真度 M3GNet 模型,其精确度可与在包含 8 倍 SCAN 计算的数据集上训练的单保真度 M3GNet 模型相媲美。这项工作为利用现有的低保真数据集以经济高效的方式开发高保真 MLP 铺平了道路。
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引用次数: 0
A Roadmap to Holographic Focused Ultrasound Approaches to Generate Thermal Patterns 全息聚焦超声方法生成热模式路线图
Pub Date : 2024-09-02 DOI: arxiv-2409.01323
Ceren Cengiz, Zekeriya Ender Eger, Pinar Acar, Wynn Legon, Shima Shahab
In therapeutic focused ultrasound (FUS), such as thermal ablation andhyperthermia, effective acousto-thermal manipulation requires precise targetingof complex geometries, sound wave propagation through irregular structures andselective focusing at specific depths. Acoustic holographic lenses (AHLs)provide a distinctive capability to shape acoustic fields into precise, complexand multifocal FUS-thermal patterns. Acknowledging the under-explored potentialof AHLs in shaping ultrasound-induced heating, this study introduces a roadmapfor acousto-thermal modeling in the design of AHLs. Three primary modelingapproaches are studied and contrasted using four distinct shape groups for theimposed target field. They include pressure-based (BSC-TR and ITER-TR),temperature-based (IHTO-TR), and machine learning (ML)-based (GaN and Feat-GAN)methods. New metrics including image quality, thermal efficiency, control, andcomputational time are introduced. The importance of evaluating target patterncomplexity, thermal and pressure requirements, and computational resources ishighlighted for selecting the appropriate methods. For lightly heterogeneousmedia and targets with lower pattern complexity, BSC-TR combined with errordiffusion algorithms provides an effective solution. As pattern complexityincreases, ITER-TR becomes more suitable, enabling optimization throughiterative forward and backward propagations controlled by different errormetrics. IHTO-TR is recommended for highly heterogeneous media, particularly inapplications requiring thermal control and precise heat deposition. GaN isideal for rapid solutions that account for acousto-thermal effects, especiallywhen model parameters and boundary conditions remain constant. In contrast,Feat-GaN is effective for moderately complex shape groups and applicationswhere model parameters must be adjusted.
在治疗性聚焦超声(FUS)中,例如热消融和热疗,有效的声热操纵需要精确瞄准复杂的几何形状、声波在不规则结构中传播以及在特定深度选择性聚焦。声全息透镜(AHL)具有将声场塑造成精确、复杂和多焦点 FUS 热模式的独特能力。考虑到 AHL 在塑造超声诱导加热方面的潜力尚未得到充分开发,本研究介绍了在设计 AHL 时进行声热建模的路线图。研究了三种主要建模方法,并使用四组不同的形状对施加的靶场进行了对比。它们包括基于压力(BSC-TR 和 ITER-TR)、基于温度(IHTO-TR)和基于机器学习(ML)(GaN 和 Feat-GAN)的方法。介绍了包括图像质量、热效率、控制和计算时间在内的新指标。评估目标模式复杂性、热和压力要求以及计算资源对于选择适当方法的重要性得到了强调。对于轻度异质介质和图案复杂度较低的目标,BSC-TR 结合错误扩散算法提供了有效的解决方案。随着图案复杂度的增加,ITER-TR 变得更加合适,它可以通过由不同误差度量控制的迭代前向和后向传播进行优化。对于高度异质介质,特别是需要热控制和精确热沉积的应用,建议使用 IHTO-TR。GaN 适用于考虑声热效应的快速求解,尤其是在模型参数和边界条件保持不变的情况下。相比之下,Feat-GaN 适用于中等复杂形状组和必须调整模型参数的应用。
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引用次数: 0
Multi-frequency Neural Born Iterative Method for Solving 2-D Inverse Scattering Problems 解决二维反向散射问题的多频神经博恩迭代法
Pub Date : 2024-09-02 DOI: arxiv-2409.01315
Daoqi Liu, Tao Shan, Maokun Li, Fan Yang, Shenheng Xu
In this work, we propose a deep learning-based imaging method for addressingthe multi-frequency electromagnetic (EM) inverse scattering problem (ISP). Bycombining deep learning technology with EM physical laws, we have successfullydeveloped a multi-frequency neural Born iterative method (NeuralBIM), guided bythe principles of the single-frequency NeuralBIM. This method integratesmultitask learning techniques with NeuralBIM's efficient iterative inversionprocess to construct a robust multi-frequency Born iterative inversion model.During training, the model employs a multitask learning approach guided byhomoscedastic uncertainty to adaptively allocate the weights of eachfrequency's data. Additionally, an unsupervised learning method, constrained bythe physical laws of ISP, is used to train the multi-frequency NeuralBIM model,eliminating the need for contrast and total field data. The effectiveness ofthe multi-frequency NeuralBIM is validated through synthetic and experimentaldata, demonstrating improvements in accuracy and computational efficiency forsolving ISP. Moreover, this method exhibits strong generalization capabilitiesand noise resistance. The multi-frequency NeuralBIM method explores a novelinversion method for multi-frequency EM data and provides an effective solutionfor the electromagnetic ISP of multi-frequency data.
在这项工作中,我们提出了一种基于深度学习的成像方法,用于解决多频电磁(EM)反散射问题(ISP)。通过将深度学习技术与电磁物理定律相结合,我们在单频 NeuralBIM 原理的指导下,成功开发了一种多频神经天生迭代法(NeuralBIM)。该方法将多任务学习技术与 NeuralBIM 的高效迭代反演过程相结合,构建了一个稳健的多频 Born 迭代反演模型。在训练过程中,该模型采用以同源不确定性为指导的多任务学习方法,自适应地分配各频率数据的权重。此外,在训练多频率神经 BIM 模型时,还采用了一种受 ISP 物理定律约束的无监督学习方法,无需对比度和总场数据。通过合成数据和实验数据验证了多频 NeuralBIM 的有效性,证明其在解决 ISP 方面的准确性和计算效率都有所提高。此外,这种方法还具有很强的泛化能力和抗噪能力。多频神经BIM方法探索了一种新颖的多频电磁数据反演方法,为多频数据的电磁ISP提供了有效的解决方案。
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引用次数: 0
Electronvolt energy resolution with broadband ptychography 电子伏特能量分辨率与宽带层析成像技术
Pub Date : 2024-09-01 DOI: arxiv-2409.00703
Silvia Cipiccia, Wiebe Stolp, Luca Fardin, Ralf Ziesche, Ingo Manke, Matthieu Boone, Chris Armstrong, Joachim R. Binder, Nicole Bohn, Alessandro Olivo, Darren Batey
Ptychography is a scanning coherent diffraction imaging techniquesuccessfully applied in the electron, visible and x-ray regimes. One of thedistinct features of ptychography with respect to other coherent diffractiontechniques is its capability of dealing with partial spatial and temporalcoherence via the reconstruction algorithm. Here we focus on the temporal andclarify the constraints which affect the energy resolution limits of theptychographic algorithms. Based on this, we design and perform simulations fora broadband ptychography in the hard x-ray regime, which enables an energyresolution down to 1 eV. We benchmark the simulations against experimentalptychographic data of an NMC battery cathode material, attaining an energyresolution of 5 eV. We review the results, discuss the limitations, and provideguidelines for future broadband ptychography experiments, its prospectiveapplication for single acquisition x-ray absorption near edge structureimaging, magnetic dichroism imaging, and potential impact on achievingdiffraction limited resolutions.
层析成像技术是一种扫描相干衍射成像技术,已成功应用于电子、可见光和 X 射线领域。与其他相干衍射技术相比,层析成像技术的一个显著特点是它能通过重建算法处理部分空间和时间相干。在此,我们将重点放在时间上,并阐明影响层析成像算法能量分辨率限制的约束条件。在此基础上,我们设计并模拟了硬 X 射线条件下的宽带层析成像技术,它能使能量分辨率低至 1 eV。我们根据 NMC 电池阴极材料的实验层析成像数据对模拟进行了基准测试,达到了 5 eV 的能量分辨率。我们回顾了这些结果,讨论了其局限性,并为未来的宽带层析成像实验提供了指导,其在单次获取 X 射线吸收近边缘结构成像、磁分色成像方面的应用前景,以及对实现衍射有限分辨率的潜在影响。
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引用次数: 0
Accelerating Phonon Thermal Conductivity Prediction by an Order of Magnitude Through Machine Learning-Assisted Extraction of Anharmonic Force Constants 通过机器学习辅助提取非谐波力常量,将声子热导率预测速度提高一个数量级
Pub Date : 2024-08-31 DOI: arxiv-2409.00360
Yagyank Srivastava, Ankit Jain
The calculation of material phonon thermal conductivity from densityfunctional theory calculations requires computationally expensive evaluation ofanharmonic interatomic force constants and has remained a computationalbottleneck in the high-throughput discovery of materials. In this work, wepresent a machine learning-assisted approach for the extraction of anharmonicforce constants through local learning of the potential energy surface. Wedemonstrate our approach on a diverse collection of 220 ternary materials forwhich the total computational time for anharmonic force constants evaluation isreduced by more than an order of magnitude from 480,000 cpu-hours to less than12,000 cpu-hours while preserving the thermal conductivity prediction accuracyto within 10%. Our approach removes a major hurdle in computational thermalconductivity evaluation and will pave the way forward for the high-throughputdiscovery of materials.
从密度函数理论计算中计算材料声子热导率需要对谐波原子间力常量进行计算昂贵的评估,这一直是高通量材料发现过程中的计算瓶颈。在这项工作中,我们提出了一种机器学习辅助方法,通过对势能面的局部学习来提取谐波力常数。我们在 220 种不同的三元材料上演示了我们的方法,评估非谐波力常数的总计算时间从 480,000 cpu 小时减少到不到 12,000 cpu 小时,减少了一个数量级以上,同时保持了 10%以内的热导率预测精度。我们的方法消除了计算热导评估中的一大障碍,将为高通量材料发现铺平道路。
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引用次数: 0
Physics-integrated Neural Network for Quantum Transport Prediction of Field-effect Transistor 用于场效应晶体管量子输运预测的物理集成神经网络
Pub Date : 2024-08-30 DOI: arxiv-2408.17023
Xiuying Zhang, Linqiang Xu, Jing Lu, Zhaofu Zhang, Lei Shen
Quantum-mechanics-based transport simulation is of importance for the designof ultra-short channel field-effect transistors (FETs) with its capability ofunderstanding the physical mechanism, while facing the primary challenge of thehigh computational intensity. Traditional machine learning is expected toaccelerate the optimization of FET design, yet its application in this field islimited by the lack of both high-fidelity datasets and the integration ofphysical knowledge. Here, we introduced a physics-integrated neural networkframework to predict the transport curves of sub-5-nm gate-all-around (GAA)FETs using an in-house developed high-fidelity database. The transport curvesin the database are collected from literature and our first-principlescalculations. Beyond silicon, we included indium arsenide, indium phosphide,and selenium nanowires with different structural phases as the FET channelmaterials. Then, we built a physical-knowledge-integrated hyper vector neuralnetwork (PHVNN), in which five new physical features were added into the inputsfor prediction transport characteristics, achieving a sufficiently low meanabsolute error of 0.39. In particular, ~98% of the current prediction residualsare within one order of magnitude. Using PHVNN, we efficiently screened out thesymmetric p-type GAA FETs that possess the same figures of merit with then-type ones, which are crucial for the fabrication of homogeneous CMOScircuits. Finally, our automatic differentiation analysis providesinterpretable insights into the PHVNN, which highlights the importantcontributions of our new input parameters and improves the reliability ofPHVNN. Our approach provides an effective method for rapidly screeningappropriate GAA FETs with the prospect of accelerating the design process ofnext-generation electronic devices.
基于量子力学的输运模拟对于超短沟道场效应晶体管(FET)的设计非常重要,它能够理解物理机制,但同时也面临着计算强度高的主要挑战。传统的机器学习有望加速场效应晶体管的优化设计,但由于缺乏高保真数据集和物理知识的整合,机器学习在这一领域的应用受到了限制。在这里,我们引入了一个物理集成神经网络框架,利用内部开发的高保真数据库预测 5 纳米以下全栅极 (GAA) FET 的传输曲线。数据库中的传输曲线收集自文献和我们的第一原理计算。除了硅之外,我们还将不同结构相的砷化铟、磷化铟和硒纳米线作为场效应晶体管的沟道材料。然后,我们建立了一个物理知识集成超矢量神经网络(PHVNN),在预测传输特性的输入中加入了五个新的物理特征,取得了 0.39 的足够低的平均绝对误差。特别是,目前约 98% 的预测残差都在一个数量级之内。利用 PHVNN,我们有效地筛选出了对称 p 型 GAA 场效应晶体管,这些晶体管具有与当时型晶体管相同的性能指标,这对于制造同质 CMOS 电路至关重要。最后,我们的自动微分分析为 PHVNN 提供了可解释的见解,突出了新输入参数的重要贡献,提高了 PHVNN 的可靠性。我们的方法为快速筛选合适的 GAA FET 提供了一种有效的方法,有望加快下一代电子器件的设计进程。
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引用次数: 0
Boundaries of universality of thermal collisions for atom-atom scattering 原子-原子散射热碰撞的普遍性边界
Pub Date : 2024-08-30 DOI: arxiv-2409.00273
Xuyang Guo, Kirk W. Madison, James L. Booth, Roman V. Krems
Thermal rate coefficients for some atomic collisions have been observed to beremarkably independent of the details of interatomic interactions at shortrange. This makes these rate coefficients universal functions of the long-rangeinteraction parameters and masses, which was previously exploited to develop aself-defining atomic sensor for ambient pressure. Here, we employ rigorousquantum scattering calculations to examine the response of thermally averagedrate coefficients for atom-atom collisions to changes in the interactionpotentials. We perform a comprehensive analysis of the universality, and theboundaries thereof, by treating the quantum scattering observables asprobabilistic predictions determined by a distribution of interactionpotentials. We show that there is a characteristic change of the resultingdistributions of rate coefficients, separating light, few-electron atoms andheavy, polarizable atoms. We produce diagrams that illustrate the boundaries ofthe thermal collision universality at different temperatures and provideguidance for future experiments seeking to exploit the universality.
据观察,某些原子碰撞的热速率系数与短程原子间相互作用的细节明显无关。这使得这些速率系数成为长程相互作用参数和质量的通用函数,以前曾有人利用这一点开发了环境压力自定义原子传感器。在这里,我们采用严格的量子散射计算来检验原子-原子碰撞的热平均速率系数对相互作用势变化的响应。我们将量子散射观测值视为由相互作用势分布决定的概率预测,从而对其普遍性及其边界进行了全面分析。我们表明,由此产生的速率系数分布有一个特征性变化,将轻质、少电子原子和重质、可极化原子区分开来。我们绘制的图表说明了不同温度下热碰撞普遍性的边界,并为未来寻求利用普遍性的实验提供了指导。
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引用次数: 0
Exploring Nonlinear System with Machine Learning: Chua and Lorentz Circuits Analyzed 用机器学习探索非线性系统:蔡氏和洛伦兹电路分析
Pub Date : 2024-08-30 DOI: arxiv-2408.16972
Zhe Wang, Haixia Fan, Jiyuan Zhang, Xiao-Yun Wang
Nonlinear circuits serve as crucial carriers and physical models forinvestigating nonlinear dynamics and chaotic behavior, particularly in thesimulation of biological neurons. In this study, Chua's circuit and Lorentzcircuit are systematically explored for the first time through machine learningcorrelation algorithms. Specifically, the upgraded and optimized SINDy-PImodel, which is based on neural network and symbolic regression algorithm, isutilized to learn the numerical results of attractors generated by these twononlinear circuits. Through error analysis, we examine the effects of theprecision of input data and the amount of data on the algorithmic model. Thefindings reveal that when the input data quantity and data precision fallwithin a certain range, the algorithm model can effectively recognize andrestore the differential equation expressions corresponding to the twocircuits. Additionally, we test the anti-interference ability of differentcircuits and the robustness of the algorithm by introducing noise into the testdata. The results indicate that under the same noise disturbance, the Lorentzcircuit has better noise resistance than Chua's circuit, providing a startingpoint for further studying the intrinsic properties and characteristics ofdifferent nonlinear circuits. The above results will not only offer a referencefor the further study of nonlinear circuits and related systems using deeplearning algorithms but also lay a preliminary theoretical foundation for thestudy of related physical problems and applications.
非线性电路是研究非线性动力学和混沌行为的重要载体和物理模型,特别是在模拟生物神经元方面。本研究首次通过机器学习相关算法对蔡氏电路和洛伦兹电路进行了系统探索。具体来说,我们利用基于神经网络和符号回归算法的升级和优化 SINDy-PImodel 来学习这两个非线性电路产生的吸引子的数值结果。通过误差分析,我们研究了输入数据的精度和数据量对算法模型的影响。结果表明,当输入数据量和数据精度在一定范围内时,算法模型能有效识别并恢复这两个电路对应的微分方程表达式。此外,我们还通过在测试数据中引入噪声来检验不同电路的抗干扰能力和算法的鲁棒性。结果表明,在相同的噪声干扰下,洛伦兹电路的抗干扰能力优于蔡氏电路,这为进一步研究不同非线性电路的内在特性和特征提供了一个起点。上述结果不仅为利用深度学习算法进一步研究非线性电路及相关系统提供了参考,也为相关物理问题的研究和应用奠定了初步的理论基础。
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引用次数: 0
Exact scattering cross section for lattice-defect scattering of phonons 声子晶格缺陷散射的精确散射截面
Pub Date : 2024-08-30 DOI: arxiv-2408.17004
Zhun-Yong Ong
The use of structurally complex lattice defects, such as functional groups,embedded nanoparticles, and nanopillars, to generate phonon scattering is apopular approach in phonon engineering for thermoelectric applications.However, the theoretical treatment of this scattering phenomenon remains aformidable challenge, especially with regards to the determination of thescattering cross sections and rates associated with such lattice defects. Usingthe extended Atomistic Green's Function (AGF) method, we describe how thenumerically exact mode-resolved scattering cross section sigma can be computedfor a phonon scattered by a single lattice defect. We illustrate the generalityand utility of the AGF-based treatment with two examples. In the first example,we treat the isotopic scattering of phonons in a harmonic chain of atoms . Inthe second example, we treat the more complex problem of phonon scattering in acarbon nanotube (CNT) containing an encapsulated C60 molecule which acts as ascatterer of the CNT phonons. The application of this method can enable a moreprecise characterization of lattice-defect scattering and result in the morecontrolled use of nanostructuring and lattice defects in phonon engineering forthermoelectric applications.
利用结构复杂的晶格缺陷(如功能基团、嵌入式纳米粒子和纳米柱)产生声子散射是热电应用声子工程中的一种流行方法。然而,这种散射现象的理论处理仍然是一项艰巨的挑战,尤其是在确定与这种晶格缺陷相关的散射截面和速率方面。利用扩展的原子格林函数(AGF)方法,我们描述了如何计算单个晶格缺陷散射声子的精确模态分辨散射截面(sigma)。我们用两个例子来说明基于 AGF 的处理方法的通用性和实用性。在第一个例子中,我们处理了声子在原子谐波链中的同位素散射。在第二个例子中,我们处理了更为复杂的碳纳米管(CNT)中的声子散射问题,碳纳米管中含有一个封装的 C60 分子,它是碳纳米管声子的散射体。应用这种方法可以更精确地描述晶格缺陷散射,从而在热电应用的声子工程中更有控制地使用纳米结构和晶格缺陷。
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引用次数: 0
期刊
arXiv - PHYS - Computational Physics
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