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MALDI imaging combined with two-photon microscopy reveals local differences in the heterogeneity of colorectal cancer MALDI 成像结合双光子显微镜揭示结直肠癌异质性的局部差异
Pub Date : 2024-09-23 DOI: 10.1038/s44303-024-00041-3
Arora Bharti, Kulkarni Ajinkya, Markus M. Andrea, Ramos-Gomes Fernanda, Bohnenberger Hanibal, Ströbel Philipp, Alves Frauke, Klein Oliver
Colorectal cancer (CRC) remains a leading cause of cancer-related mortality worldwide, accentuated by its heterogeneity and complex tumour microenvironment (TME). The role of TME on tumour pathophysiology is pivotal, especially the influence of components of the extracellular matrix (ECM), such as collagen. We introduce a novel multimodal imaging strategy to unravel the complex spatial heterogeneity of CRC by integrating the imaging features from two-photon laser scanning microscopy (2PLSM) and histology with proteomics signatures from matrix-assisted laser desorption ionization-mass spectrometry imaging (MALDI MSI). Our study is the first to correlate the structural coherence of collagen fibres and the nuclei distribution profile of tumour tissue with the peptide signatures, offering insights into the proteomic landscape of CRC within regions of high nuclei distribution (HND), as well as chaotic and organised regions of collagen. We use this approach to distinguish the patient tissues originating from left-sided colorectal cancer (LSCC) and from right-sided colorectal cancer (RSCC). This discriminative signature highlights the role of high nuclei distribution and collagen architecture in tumour progression. Complementary m/z values of several proteins associated to components of ECM, such as plectin, vinculin, vimentin, and myosin, have shown differentially intensity distributions between LSCC and RSCC. Our findings demonstrate the potential of combining structural information with peptide features to identify molecular signatures in different tumour regions and retrieve new insights into CRC pathophysiology.
结直肠癌(CRC)仍然是全球癌症相关死亡的主要原因,其异质性和复杂的肿瘤微环境(TME)使其更为突出。肿瘤微环境对肿瘤病理生理学的作用至关重要,尤其是细胞外基质(ECM)成分(如胶原蛋白)的影响。我们引入了一种新颖的多模态成像策略,通过整合双光子激光扫描显微镜(2PLSM)和组织学的成像特征以及基质辅助激光解吸电离质谱成像(MALDI MSI)的蛋白质组学特征,来揭示 CRC 复杂的空间异质性。我们的研究首次将胶原纤维的结构连贯性和肿瘤组织的细胞核分布特征与肽特征相关联,从而深入了解了高细胞核分布(HND)区域内的 CRC 蛋白组学情况,以及胶原蛋白的混乱和有组织区域。我们利用这种方法来区分左侧结直肠癌(LSCC)和右侧结直肠癌(RSCC)患者组织。这一鉴别特征突出了高核分布和胶原结构在肿瘤进展中的作用。与 ECM 成分(如 plectin、vinculin、vimentin 和 myosin)相关的几种蛋白质的互补 m/z 值在 LSCC 和 RSCC 之间显示出不同的强度分布。我们的研究结果表明,将结构信息与肽特征相结合,可以识别不同肿瘤区域的分子特征,并获得对 CRC 病理生理学的新见解。
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引用次数: 0
Magnetic resonance reveals early lipid deposition in murine prediabetes as predictive marker for cardiovascular injury 磁共振发现小鼠糖尿病前期的早期脂质沉积是心血管损伤的预测标志物
Pub Date : 2024-09-23 DOI: 10.1038/s44303-024-00044-0
Katja Heller, Vera Flocke, Tamara Straub, Zhaoping Ding, Tanu Srivastava, Melissa Nowak, Florian Funk, Bodo Levkau, Joachim Schmitt, Maria Grandoch, Ulrich Flögel
People with diabetes have an increased cardiovascular risk and a poorer outcome after myocardial infarction (MI). However, the exact underlying mechanisms are still unclear, as is the question of which non-invasive measures could be used to predict the altered risk for the patient at early stages of the disease and adapt personalized treatment. Here, we used a holistic magnetic resonance approach to monitor longitudinally not only the main target heart, but also liver, peripheral/skeletal muscle, bone marrow, and hematopoiesis during disease development and subsequent MI. In prediabetic mice, we found a strong accumulation of lipids in all organs which preceded even a significant whole-body weight gain. Intramyocellular lipids (IMCLs) were most sensitive to reveal in vivo very early alterations in tissue properties during the prediabetic state. Subsequent induction of MI led to a persistent impairment of contractile function in septal/posterior segments of prediabetic hearts which correlated with their lipid load prior MI. At the same time, prediabetic cardiomyocytes exhibited sarcomere function at its limit resulting in overload and lower compensatory contractility of the healthy myocardium after MI. In summary, we identified IMCLs as very early marker in murine prediabetes and together with the cardiac lipid load as predictive for the functional outcome after MI.
糖尿病患者的心血管风险增加,心肌梗塞(MI)后的预后较差。然而,其确切的内在机制仍不清楚,同样不清楚的是,哪些非侵入性措施可用于在疾病的早期阶段预测患者的风险变化并调整个性化治疗。在这里,我们采用了一种整体磁共振方法,在疾病发展和随后的心肌梗死过程中,不仅纵向监测主要靶心,还监测肝脏、外周/骨骼肌、骨髓和造血。在糖尿病前期的小鼠中,我们发现所有器官中的脂质都会大量积聚,甚至先于全身体重的显著增加。肌细胞内脂质(IMCLs)对揭示糖尿病前期体内组织特性的早期改变最为敏感。随后诱导的心肌梗死导致糖尿病前期心脏室间隔/后段的收缩功能持续受损,这与心肌梗死前的脂质负荷有关。与此同时,糖尿病前期心肌细胞的肌节功能达到极限,导致心肌梗死后心肌负荷过重,代偿收缩能力低于健康心肌。总之,我们发现 IMCLs 是小鼠糖尿病前期的早期标志物,它与心肌脂质负荷一起可预测心肌梗死后的功能结果。
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引用次数: 0
Non-invasive in vivo imaging of changes in Collagen III turnover in myocardial fibrosis 对心肌纤维化过程中胶原蛋白 III 更替变化的无创活体成像
Pub Date : 2024-09-17 DOI: 10.1038/s44303-024-00037-z
Nadia Chaher, Sara Lacerda, Giuseppe Digilio, Sergio Padovan, Ling Gao, Begoña Lavin, Rachele Stefania, Carlos Velasco, Gastão Cruz, Claudia Prieto, René M. Botnar, Alkystis Phinikaridou
Heart failure (HF) affects 64 million people globally with enormous societal and healthcare costs. Myocardial fibrosis, characterised by changes in collagen content drives HF. Despite evidence that collagen type III (COL3) content changes during myocardial fibrosis, in vivo imaging of COL3 has not been achieved. Here, we discovered the first imaging probe that binds to COL3 with high affinity and specificity, by screening candidate peptide-based probes. Characterisation of the probe showed favourable magnetic and biodistribution properties. The probe’s potential for in vivo molecular cardiac magnetic resonance imaging was evaluated in a murine model of myocardial infarction. Using the new probe, we were able to map and quantify, previously undetectable, spatiotemporal changes in COL3 after myocardial infarction and monitor response to treatment. This innovative probe provides a promising tool to non-invasively study the unexplored roles of COL3 in cardiac fibrosis and other cardiovascular conditions marked by changes in COL3.
心力衰竭(HF)影响着全球 6400 万人,造成巨大的社会和医疗成本。以胶原蛋白含量变化为特征的心肌纤维化是心力衰竭的诱因。尽管有证据表明 III 型胶原蛋白(COL3)的含量在心肌纤维化过程中会发生变化,但 COL3 的体内成像尚未实现。在这里,我们通过筛选候选肽基探针,发现了第一个能与 COL3 高亲和力和特异性结合的成像探针。探针的表征显示出良好的磁性和生物分布特性。我们在小鼠心肌梗塞模型中评估了该探针用于体内分子心脏磁共振成像的潜力。利用这种新探针,我们能够绘制和量化心肌梗塞后 COL3 的时空变化图,并监测对治疗的反应。这种创新探针为非侵入式研究 COL3 在心脏纤维化和其他以 COL3 变化为标志的心血管疾病中尚未探索的作用提供了一种前景广阔的工具。
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引用次数: 0
Real-time tracking of the Bragg peak during proton therapy via 3D protoacoustic Imaging in a clinical scenario 在临床场景中通过三维原声成像对质子治疗过程中的布拉格峰进行实时跟踪
Pub Date : 2024-09-17 DOI: 10.1038/s44303-024-00039-x
Siqi Wang, Gilberto Gonzalez, Leshan Sun, Yifei Xu, Prabodh Pandey, Yong Chen, Shawn (Liangzhong) Xiang
Proton radiotherapy favored over X-ray photon therapy due to its reduced radiation exposure to surrounding healthy tissues, is highly dependent on the accurate positioning of the Bragg peak. Existing methods like PET and prompt gamma imaging to localize Bragg peak face challenges of low precision and high complexity. Here we introduce a 3D protoacoustic imaging with a 2D matrix array of 256 ultrasound transducers compatible with 256 parallel data acquisition channels provides real-time imaging capability (up to 75 frames per second with 10 averages), achieving high precision (5 mm/5% Gamma index shows accuracy better than 95.73%) at depths of tens of centimeters. We have successfully implemented this method in liver treatment with 5 pencil beam scanning and in prostate cancer treatment on a human torso phantom using a clinical proton machine. This demonstrates its capability to accurately identify the Bragg peak in practical clinical scenarios. It paves the way for adaptive radiotherapy with real-time feedback, potentially revolutionizing radiotherapy by enabling closed-loop treatment for improved patient outcomes.
质子放疗比 X 射线光子疗法更受青睐,因为它减少了对周围健康组织的辐射照射,但质子放疗高度依赖于布拉格峰的精确定位。现有的定位布拉格峰的方法(如正电子发射计算机断层显像和及时伽马成像)面临着精度低、复杂度高的挑战。在这里,我们介绍一种三维原声成像方法,它采用 256 个超声换能器组成的二维矩阵阵列,兼容 256 个并行数据采集通道,具有实时成像能力(每秒最多 75 帧,10 次平均),可在数十厘米深度实现高精度成像(5 毫米/5% 伽马指数显示精确度优于 95.73%)。我们已在肝脏治疗中使用 5 支铅笔束扫描,并在前列腺癌治疗中使用临床质子机对人体躯干模型进行了成功应用。这证明了它在实际临床应用中准确识别布拉格峰的能力。它为具有实时反馈的自适应放疗铺平了道路,通过实现闭环治疗改善患者疗效,从而有可能彻底改变放疗。
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引用次数: 0
The role of [18F]FDG-PET/CT in Staphylococcus aureus bacteremia: A clinical perspective 18F]FDG-PET/CT 在金黄色葡萄球菌菌血症中的作用:临床视角
Pub Date : 2024-09-13 DOI: 10.1038/s44303-024-00036-0
Ilse J. E. Kouijzer, Nesrin Ghanem-Zoubi
Staphylococcus aureus bacteremia (SAB) is a severe infectious disease with a heterogenous clinical presentation. To diagnose possible metastatic infection and to start early adequate management including antimicrobial treatment and adequate source control as soon as possible, guidelines recommend additional imaging such as [18F]FDG-PET/CT. In this clinical perspective, we describe the current evidence of [18F]FDG-PET/CT in SAB and we share our view on the value of [18F]FDG-PET/CT in specific SAB patients.
金黄色葡萄球菌菌血症(SAB)是一种严重的感染性疾病,临床表现多种多样。为了诊断可能的转移性感染并尽早开始适当的治疗,包括抗菌治疗和充分的病源控制,指南建议进行额外的影像学检查,如[18F]FDG-PET/CT。在本临床视角中,我们描述了[18F]FDG-PET/CT 在 SAB 中的现有证据,并分享了我们对[18F]FDG-PET/CT 在特定 SAB 患者中的价值的看法。
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引用次数: 0
Quantitative microbiology with widefield microscopy: navigating optical artefacts for accurate interpretations 使用宽视野显微镜进行微生物定量分析:利用光学伪影进行准确解释
Pub Date : 2024-09-02 DOI: 10.1038/s44303-024-00024-4
Georgeos Hardo, Ruizhe Li, Somenath Bakshi
Time-resolved live-cell imaging using widefield microscopy is instrumental in quantitative microbiology research. It allows researchers to track and measure the size, shape, and content of individual microbial cells over time. However, the small size of microbial cells poses a significant challenge in interpreting image data, as their dimensions approache that of the microscope’s depth of field, and they begin to experience significant diffraction effects. As a result, 2D widefield images of microbial cells contain projected 3D information, blurred by the 3D point spread function. In this study, we employed simulations and targeted experiments to investigate the impact of diffraction and projection on our ability to quantify the size and content of microbial cells from 2D microscopic images. This study points to some new and often unconsidered artefacts resulting from the interplay of projection and diffraction effects, within the context of quantitative microbiology. These artefacts introduce substantial errors and biases in size, fluorescence quantification, and even single-molecule counting, making the elimination of these errors a complex task. Awareness of these artefacts is crucial for designing strategies to accurately interpret micrographs of microbes. To address this, we present new experimental designs and machine learning-based analysis methods that account for these effects, resulting in accurate quantification of microbiological processes.
使用宽场显微镜进行时间分辨活细胞成像在定量微生物学研究中非常重要。研究人员可以利用它跟踪和测量单个微生物细胞随时间变化的大小、形状和内容。然而,由于微生物细胞的尺寸接近显微镜的景深,并且开始出现明显的衍射效应,因此细胞的小尺寸给解读图像数据带来了巨大挑战。因此,微生物细胞的二维宽视场图像包含投射的三维信息,而三维点扩散函数使其变得模糊不清。在这项研究中,我们利用模拟和针对性实验来研究衍射和投影对我们从二维显微图像量化微生物细胞大小和内容的能力的影响。这项研究指出,在定量微生物学中,投影和衍射效应的相互作用会产生一些新的、通常未被考虑的伪影。这些伪影在尺寸、荧光定量甚至单分子计数方面都会带来很大的误差和偏差,因此消除这些误差是一项复杂的任务。认识这些伪影对于设计准确解读微生物显微照片的策略至关重要。为了解决这个问题,我们提出了新的实验设计和基于机器学习的分析方法,以考虑这些影响,从而准确量化微生物过程。
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引用次数: 0
Focal cortical dysplasia (type II) detection with multi-modal MRI and a deep-learning framework 利用多模态磁共振成像和深度学习框架检测局灶性皮质发育不良(II 型
Pub Date : 2024-09-02 DOI: 10.1038/s44303-024-00031-5
Anand Shankar, Manob Jyoti Saikia, Samarendra Dandapat, Shovan Barma
Focal cortical dysplasia type II (FCD-II) is a prominent cortical development malformation associated with drug-resistant epileptic seizures that leads to lifelong cognitive impairment. Efficient MRI, followed by its analysis (e.g., cortical abnormality distinction, precise localization assistance, etc.) plays a crucial role in the diagnosis and supervision (e.g., presurgery planning and postoperative care) of FCD-II. Involving machine learning techniques particularly, deep-learning (DL) approaches, could enable more effective analysis techniques. We performed a comprehensive study by choosing six different well-known DL models, three image planes (axial, coronal, and sagittal) of two MRI modalities (T1w and FLAIR), demographic characteristics (age and sex) and clinical characteristics (brain hemisphere and lobes) to identify a suitable DL model for analysing FCD-II. The outcomes show that the DenseNet201 model is more suitable because of its superior classification accuracy, high-precision, F1-score, and large area under the receiver operating characteristic (ROC) curve and precision–recall (PR) curve.
局灶性皮质发育不良 II 型(FCD-II)是一种突出的皮质发育畸形,与耐药性癫痫发作有关,会导致终生认知障碍。高效的核磁共振成像及其分析(如区分皮质异常、协助精确定位等)在 FCD-II 的诊断和监护(如手术前规划和术后护理)中发挥着至关重要的作用。采用机器学习技术,特别是深度学习(DL)方法,可以实现更有效的分析技术。我们进行了一项综合研究,选择了六种不同的知名 DL 模型、两种 MRI 模式(T1w 和 FLAIR)的三种图像平面(轴位、冠状位和矢状位)、人口统计学特征(年龄和性别)和临床特征(大脑半球和脑叶),以确定适合分析 FCD-II 的 DL 模型。结果表明,DenseNet201 模型因其卓越的分类准确性、高精确度、F1-分数、较大的接收者操作特征曲线(ROC)下面积和精确度-召回(PR)曲线而更为合适。
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引用次数: 0
Emerging targets for positron emission tomography imaging in proteinopathies 蛋白病正电子发射断层成像的新目标
Pub Date : 2024-08-21 DOI: 10.1038/s44303-024-00032-4
Melissa Chassé, Neil Vasdev
Positron emission tomography (PET) imaging of neurodegenerative disease has historically focused on a small number of established targets. The development of selective PET radiotracers for novel biological targets enables new ways to interrogate the neuropathology of proteinopathies and will advance our understanding of neurodegeneration. This perspective aims to highlight recent PET radiotracers developed for five emerging targets in proteinopathies (i.e., mHTT, BACE1, TDP-43, OGA, and CH24H).
神经退行性疾病的正电子发射断层扫描(PET)成像历来只关注少数几个既定靶点。针对新型生物靶点开发的选择性 PET 放射线racers 可为蛋白质病的神经病理学研究提供新的方法,并将促进我们对神经退行性病变的了解。本视角旨在重点介绍最近针对蛋白病的五个新靶点(即 mHTT、BACE1、TDP-43、OGA 和 CH24H)开发的 PET 放射性racers。
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引用次数: 0
Looking forward at npj Imaging 在 npj Imaging 展望未来
Pub Date : 2024-08-21 DOI: 10.1038/s44303-024-00030-6
Rita Strack
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引用次数: 0
[18F]FSPG-PET provides an early marker of radiotherapy response in head and neck squamous cell cancer [18F]FSPG-PET是头颈部鳞状细胞癌放疗反应的早期标志物。
Pub Date : 2024-08-09 DOI: 10.1038/s44303-024-00038-y
Khrishanthne Sambasivan, Will E. Tyrrell, Rizwan Farooq, Jenasee Mynerich, Richard S. Edwards, Muhammet Tanc, Teresa Guerrero Urbano, Timothy H. Witney
The ability to image early treatment response to radiotherapy in head and neck squamous cell carcinoma (HNSCC) will enable the identification of radioresistant tumor volumes suitable for treatment intensification. Here, we propose the system xc− radiotracer (4S)-4-(3-[18F]fluoropropyl)-L-glutamate ([18F]FSPG) as a non-invasive method to monitor radiation response in HNSCC. We assessed temporal changes in cell death, antioxidant status, and [18F]FSPG retention following a single dose of 10 Gy irradiation in FaDU HNSCC cells. Next, using a fractionated course of radiotherapy, we assessed tumor volume changes and performed [18F]FSPG-PET imaging in FaDU-bearing mouse xenografts, followed by ex vivo response assessment. In cells, 10 Gy irradiation reduced [18F]FSPG retention, coinciding with the induction of apoptosis and the production of reactive oxygen species. In vivo, [18F]FSPG tumor retention was halved seven days after the start of treatment, which preceded radiotherapy-induced tumor shrinkage, thereby confirming [18F]FSPG-PET as an early and sensitive marker of radiation response.
对头颈部鳞状细胞癌(HNSCC)放疗的早期治疗反应进行成像的能力将有助于识别适合强化治疗的抗放射肿瘤体积。在这里,我们提出用 xc - 放射性示踪剂 (4S)-4-(3-[18F]fluoropropyl)-L -谷氨酸([18F]FSPG)系统作为监测 HNSCC 放射反应的非侵入性方法。我们评估了FaDU HNSCC细胞在单剂量10 Gy照射后细胞死亡、抗氧化状态和[18F]FSPG保留的时间变化。接下来,我们采用分次放疗的方法,评估了肿瘤体积的变化,并对FaDU小鼠异种移植进行了[18F]FSPG-PET成像,然后进行了体内外反应评估。在细胞中,10 Gy 照射减少了[18F]FSPG 的保留,这与诱导凋亡和活性氧的产生相吻合。在体内,[18F]FSPG 的肿瘤保留率在治疗开始七天后减半,这比放疗引起的肿瘤缩小更早,从而证实[18F]FSPG-PET 是辐射反应的早期敏感标记物。
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引用次数: 0
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npj Imaging
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