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Hepatic organic anion transporting polypeptides (OATPs) as MRI reporter proteins. 肝脏有机阴离子转运多肽(oats)作为MRI报告蛋白。
Pub Date : 2026-01-07 DOI: 10.1038/s44303-025-00132-9
Daniel R Woldring, Theodore Belecciu, Logan R Garland, Andrea Amalfitano, Erik M Shapiro

Organic anion transporting polypeptides (OATPs) are hepatic membrane transporters responsible for the uptake of numerous endogenous compounds and drugs. Among these, OATP1B1 and OATP1B3 in humans, and their orthologs in other species, mediate the cellular uptake of clinically approved hepatospecific MRI contrast agents, rendering them suitable candidates for use as MRI reporter proteins. This review examines the structural biology, evolutionary divergence, and transport mechanisms of hepatic OATPs, with a focus on their capacity to serve as genetically encoded imaging reporters. We survey the uptake and imaging characteristics of clinically available and experimental contrast agents in species-specific contexts and detail how hepatic OATPs have been leveraged in preclinical models for tracking engineered cells in oncology, regenerative medicine, and immunotherapy. Special attention is given to the pioneering studies that established OATP1A1 and OATP1B3 as MRI reporter proteins, the challenges related to contrast dose and imaging timing, and the emerging solutions such as dual-reporter systems and dynamic imaging protocols. Compared to traditional labeling strategies like iron oxide nanoparticles, OATP-based reporters enable positive contrast on T1-weighted MRI, avoid signal ambiguity, and permit multimodal imaging using clinically approved probes. The integration of hepatic OATPs as MRI reporter proteins offers a translationally feasible platform for non-invasive, longitudinal imaging of therapeutic cells in clinical trials and medicine. This technology has the potential to improve safety, efficacy, and mechanistic understanding across a wide array of biomedical applications.

有机阴离子转运多肽(oats)是肝膜转运体,负责摄取许多内源性化合物和药物。其中,人类中的OATP1B1和OATP1B3及其在其他物种中的同源物介导临床批准的肝特异性MRI造影剂的细胞摄取,使其成为MRI报告蛋白的合适候选者。本文综述了肝脏oops的结构生物学、进化分化和转运机制,重点研究了它们作为基因编码成像报告者的能力。我们调查了临床可用的对比剂和实验对比剂在物种特异性背景下的摄取和成像特征,并详细介绍了肝脏oops如何在肿瘤、再生医学和免疫治疗的临床前模型中用于跟踪工程细胞。特别关注的是建立OATP1A1和OATP1B3作为MRI报告蛋白的开创性研究,与造影剂剂量和成像时间相关的挑战,以及新兴的解决方案,如双报告系统和动态成像方案。与氧化铁纳米颗粒等传统标记策略相比,基于otp的报告器可以在t1加权MRI上进行正对比,避免信号模糊,并允许使用临床批准的探针进行多模态成像。肝脏oops作为MRI报告蛋白的整合为临床试验和医学中治疗细胞的非侵入性纵向成像提供了一个翻译可行的平台。这项技术有潜力在广泛的生物医学应用中提高安全性、有效性和机制理解。
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引用次数: 0
Noninvasive in vivo deoxycytidine kinase (dCK)-PET identifies tumor-draining lymph nodes upon immune checkpoint inhibitor therapy. 无创体内脱氧胞苷激酶(dCK)-PET在免疫检查点抑制剂治疗下识别肿瘤引流淋巴结。
Pub Date : 2026-01-06 DOI: 10.1038/s44303-025-00133-8
Cécile Philippe, Jonathan Cotton, Gregory D Bowden, Simone Pöschel, Philipp Knopf, Barbara Schörg, Irene Gonzalez-Menendez, Dominik Sonanini, Lukas Flatz, Martin Allen-Auerbach, Caius G Radu, Johannes Czernin, Leticia Quintanilla-Martinez, Marcus Hacker, Bernd J Pichler, Andreas Maurer, Manfred Kneilling

Efficient application of immunotherapy necessitates advanced whole-body imaging techniques to monitor sites of immune cell activation. Deoxycytidine kinase (dCK), a key enzyme in the deoxynucleotide salvage pathway, is upregulated in proliferating immune cells and can be targeted by the radiotracers [18F]FAC (preclinical) and [18F]CFA (clinical), allowing for noninvasive monitoring of immune activation in lymphatic organs via positron emission tomography (PET). In this study, we aimed to assess the efficacy of [18F]FAC in detecting immune activation upon immune checkpoint inhibitor therapy (CIT). In vitro, activated T cells and macrophages exhibited significantly higher [18F]FAC uptake compared to their naïve counterparts. In vivo, preclinical [18F]FAC-PET/MRI revealed a CIT-induced significant increase in [18F]FAC uptake in tumor-draining lymph nodes (TDLNs) compared to contralateral lymph nodes, independent of tumor responsiveness. This phenomenon was absent in TDLNs of sham-treated experimental mice. Ex vivo cell sorting further confirmed elevated [18F]FAC uptake in T cells from TDLNs following CIT. Consistently, [18F]CFA-PET/CT imaging in metastatic melanoma patients demonstrated CIT-induced enhanced regional LN uptake. Together, these findings establish a strong correlation between CIT-induced immune activation and [18F]FAC/[18F]CFA uptake, underscoring the critical role of TDLNs in cancer immuotherapy. The radiotracers [18F]FAC and [18F]CFA provide valuable tools for noninvasive monitoring of immune cell activation, potentially unveiling tumor-microenvironment-related resistance mechanisms and advancing the utility of PET imaging in immunotherapy monitoring and patient stratification.

免疫治疗的有效应用需要先进的全身成像技术来监测免疫细胞活化的部位。脱氧胞苷激酶(dCK)是脱氧核苷酸挽救途径中的关键酶,在增殖的免疫细胞中表达上调,可以被放射性示踪剂[18F]FAC(临床前)和[18F]CFA(临床)靶向,从而通过正电子发射断层扫描(PET)对淋巴器官的免疫激活进行无创监测。在本研究中,我们旨在评估[18F]FAC在检测免疫检查点抑制剂治疗(CIT)免疫激活方面的功效。在体外,活化的T细胞和巨噬细胞与naïve细胞相比,表现出明显更高的[18F]FAC摄取。在体内,临床前[18F]FAC- pet /MRI显示,与对侧淋巴结相比,ctc诱导的肿瘤引流淋巴结(tdln)中[18F]FAC摄取显著增加,与肿瘤反应性无关。这种现象在假药小鼠的tdln中不存在。离体细胞分选进一步证实了[18F] CIT后TDLNs T细胞中FAC摄取升高。与此一致的是,[18F]转移性黑色素瘤患者的CFA-PET/CT成像显示CIT诱导的局部LN摄取增强。总之,这些发现建立了ctc诱导的免疫激活与[18F]FAC/[18F]CFA摄取之间的强相关性,强调了tdln在癌症免疫治疗中的关键作用。放射性示踪剂[18F]FAC和[18F]CFA为无创监测免疫细胞活化提供了有价值的工具,有可能揭示肿瘤微环境相关的耐药机制,并推进PET成像在免疫治疗监测和患者分层中的应用。
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引用次数: 0
Dual deep learning approach for non-invasive renal tumour subtyping with VERDICT-MRI. 双重深度学习方法用于非侵入性肾肿瘤的VERDICT-MRI分型。
Pub Date : 2026-01-06 DOI: 10.1038/s44303-025-00135-6
Snigdha Sen, Lorna Smith, Lucy Caselton, Joey Clemente, Maxine Tran, Shonit Punwani, David Atkinson, Richard L Hesketh, Eleftheria Panagiotaki

Renal cell carcinomas (RCCs) have multiple subtypes that are difficult to distinguish using imaging alone. This study characterises renal tumour microstructure using diffusion MRI (dMRI) and the Vascular, Extracellular and Restricted Diffusion for Cytometry in Tumours (VERDICT)-MRI framework. Patients were prospectively recruited from the RIM trial (ClinicalTrials.gov: NCT07173140, 20/11/2024). Fourteen patients with 17 renal tumours (including benign and various RCC subtypes) underwent dMRI using nine b-values (0-2500 s/mm²). A three-compartment VERDICT model was fitted with a self-supervised neural network. Compared to simpler dMRI models, VERDICT more accurately captured the diffusion data in tumour and healthy tissue. VERDICT revealed significant differences in intracellular volume fraction between cancerous and normal tissue, and in vascular volume fraction between vascular and non-vascular regions. A feature selection method identified a reduced 4 b-value protocol (b = [70, 150, 1000, 2000]), cutting scan time by over 30 min, enabling more efficient imaging in larger cohorts.

肾细胞癌(RCCs)有多种亚型,很难单独使用影像学来区分。本研究利用扩散MRI (dMRI)和肿瘤细胞术的血管、细胞外和限制扩散(VERDICT)-MRI框架来表征肾肿瘤的微观结构。患者从RIM试验(ClinicalTrials.gov: NCT07173140, 20/11/2024)中前瞻性招募。14例患者共17例肾肿瘤(包括良性和各种肾细胞癌亚型)行dMRI,使用9个b值(0-2500 s/mm²)。采用自监督神经网络拟合三室VERDICT模型。与简单的dMRI模型相比,VERDICT更准确地捕获了肿瘤和健康组织中的扩散数据。结论显示癌组织和正常组织的细胞内体积分数以及血管和非血管区域的血管体积分数存在显著差异。一种特征选择方法确定了减少的4b值协议(b =[70,150,1000,2000]),将扫描时间缩短了30分钟以上,从而在更大的队列中实现更有效的成像。
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引用次数: 0
Towards time-resolved multiscale and multimodal imaging. 迈向时间分辨多尺度和多模态成像。
Pub Date : 2025-12-24 DOI: 10.1038/s44303-025-00131-w
Jishizhan Chen

Current biomedical imaging focuses on spatial detail but overlooks time, limiting our understanding of disease progression. There is an unmet need for temporal atlases that align multiscale and multimodal data across defined timepoints, enabling dynamic mapping of pathophysiology. This framework will pave the way for more personalised, time-aware diagnostics and interventions.

目前的生物医学成像侧重于空间细节,但忽略了时间,限制了我们对疾病进展的理解。对时间图谱的需求尚未得到满足,这些时间图谱可以跨定义的时间点排列多尺度和多模态数据,从而实现病理生理学的动态映射。这一框架将为更加个性化、具有时效性的诊断和干预铺平道路。
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引用次数: 0
Quantitative multi-metabolite imaging of Parkinson's disease using AI boosted molecular MRI. 人工智能增强分子MRI对帕金森病多代谢物的定量成像。
Pub Date : 2025-12-22 DOI: 10.1038/s44303-025-00130-x
Hagar Shmuely, Michal Rivlin, Or Perlman

Parkinson's disease (PD) diagnosis remains a substantial clinical challenge due to its heterogeneous symptomatology and the absence of reliable early-stage biomarkers. While molecular imaging offers promise, current methods are lengthy or have limited specificity. Here, we combined a rapid molecular MRI acquisition paradigm with deep learning based reconstruction for multi-metabolite quantification of glutamate, mobile proteins, semisolid, and mobile macromolecules in an acute MPTP (1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine) mouse model. The resulting quantitative parameter maps align well with histology and magnetic resonance spectroscopy (MRS) findings. Notably, the semisolid magnetization transfer (MT), amide, and aliphatic relayed nuclear Overhauser effect (rNOE) proton volume fractions emerged as promising PD biomarkers.

帕金森病(PD)的诊断仍然是一个重大的临床挑战,由于其异质性的症状和缺乏可靠的早期生物标志物。虽然分子成像带来了希望,但目前的方法耗时长,特异性有限。在这里,我们将快速分子MRI采集范式与基于深度学习的重建相结合,用于急性MPTP(1-甲基-4-苯基-1,2,3,6-四氢吡啶)小鼠模型中谷氨酸、移动蛋白、半固体和移动大分子的多代谢物定量。由此产生的定量参数图与组织学和磁共振波谱(MRS)结果很好地吻合。值得注意的是,半固体磁化转移(MT)、酰胺和脂肪族传递核Overhauser效应(rNOE)质子体积分数成为有希望的PD生物标志物。
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引用次数: 0
89Zr-anti-CD8 immunoPET visualizes heterogeneous intratumoral CD8+ immune responses to treatment with radiation and anti-CTLA4. 89Zr-anti-CD8免疫pet显示肿瘤内CD8+对放疗和抗ctla4治疗的异质免疫反应。
Pub Date : 2025-12-10 DOI: 10.1038/s44303-025-00128-5
Elizabeth A Germino, Kirstin A Zettlitz, Tyler Watkins, Bao Ying Chen, Deirdre La Placa, Felix B Salazar, Jennifer Chean, Shichang Li, Heather M McGee, Terence M Williams, Anna M Wu

Anti-CD8 immunoPET facilitates non-invasive, whole-body visualization of immune responses, and syngeneic preclinical models are a crucial tool for studying tumor infiltration of T cells in response to cancer therapies. This study characterized longitudinal CD8+ T cell responses in an orthotopic mouse model of breast cancer treated with radiation and anti-CTLA4 by immunohistochemistry and anti-CD8 immunoPET, confirming an early but heterogeneous response induced by combination treatment that is detectable by imaging.

抗cd8免疫pet促进了无创、全身免疫反应的可视化,而同基因的临床前模型是研究肿瘤浸润T细胞对癌症治疗反应的重要工具。本研究在接受放射治疗和免疫组织化学和抗CD8免疫pet抗ctla4治疗的原位乳腺癌小鼠模型中表征了纵向CD8+ T细胞反应,证实了由联合治疗诱导的早期异质性反应,该反应可通过成像检测到。
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引用次数: 0
New insights into radiolabelled siderophores for molecular imaging of bacterial infections. 放射性标记铁载体用于细菌感染分子成像的新见解。
Pub Date : 2025-11-26 DOI: 10.1038/s44303-025-00126-7
Katerina Dvorakova Bendova, Kristyna Krasulova, Barbora Neuzilova, Marian Hajduch, Milos Petrik

This perspective article aims to provide an update on current trends in the research of radiolabelled siderophores for molecular imaging of bacterial infections. It begins by explaining the importance of developing novel diagnostic tools for infections and addresses the limitations of contemporary methods, including molecular imaging. The discussion then shifts to compounds currently being studied for nuclear imaging, with a focus on radiolabelled siderophores and recent advances in their development. It also provides the latest insights into the structures of siderophores, their utilisation by bacteria and their role in bacterial metabolism, as well as potential for labelling with various radioisotopes. Additionally, it presents the use of radiolabelled siderophores, both naturally occurring and artificial siderophore derivates, for imaging of various bacterial infections.

这篇前瞻性的文章旨在提供最新的研究趋势在放射性标记的铁载体细菌感染的分子成像。它首先解释了开发新型感染诊断工具的重要性,并解决了包括分子成像在内的当代方法的局限性。然后讨论转向目前正在研究的用于核成像的化合物,重点是放射性标记的铁载体及其发展的最新进展。它还提供了对铁载体结构的最新见解,它们在细菌中的利用及其在细菌代谢中的作用,以及用各种放射性同位素标记的潜力。此外,它提出了使用放射性标记的铁载体,天然存在和人工铁载体衍生物,用于各种细菌感染的成像。
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引用次数: 0
A practical prescription for magnetic resonance microscopy in a horizontal bore magnet. 一个实用的处方磁共振显微镜在一个水平孔磁铁。
Pub Date : 2025-11-26 DOI: 10.1038/s44303-025-00129-4
Bibek Dhakal, Benjamin M Hardy, Adam W Anderson, Mark D Does, Junzhong Xu, John C Gore

Magnetic resonance microscopy (MRM) produces high spatial resolution proton images of biological tissues, plants, and porous media, revealing microstructural details and contrast unattainable by other means. A major challenge in MRM is the low signal-to-noise ratio at high spatial resolutions, as smaller voxels produce smaller MR signals. This necessitates the use of highly sensitive microcoils, high-performance gradient systems, and high magnetic fields. Here, we present a step-by-step prescription for fabricating a cost-effective, flexible microimaging probe system compatible with horizontal bore high-field MRI systems. We demonstrate performance at 15.2 T by acquiring high-resolution (15 μm isotropic voxels) images of ex vivo mouse spinal cord (gray matter SNR 38; 46 h scan) and hippocampus (SNR 67; 45 h scan), clearly resolving microstructural features. Shorter imaging times are possible using compressed sampling. The flexible probe design supports solenoid diameters ranging from < 1 mm up to 10 mm in diameter, offering flexibility for imaging a variety of biological samples at high resolution.

磁共振显微镜(MRM)产生生物组织、植物和多孔介质的高空间分辨率质子图像,揭示微观结构细节和对比度,这是其他手段无法实现的。MRM的一个主要挑战是在高空间分辨率下的低信噪比,因为较小的体素产生较小的MR信号。这就需要使用高灵敏度微线圈、高性能梯度系统和高磁场。在这里,我们提出了一个一步一步的处方制造一个具有成本效益的,灵活的微成像探头系统兼容水平孔径高场MRI系统。我们通过获取离体小鼠脊髓(灰质信噪比为38,扫描46小时)和海马(信噪比为67,扫描45小时)的高分辨率(15 μm各向同性体素)图像来证明在15.2 T下的性能,清楚地解决了微观结构特征。使用压缩采样可以缩短成像时间。灵活的探头设计支持螺线管直径范围从
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引用次数: 0
Beyond perfusion: a review of peptide radiopharmaceuticals for cardiovascular imaging. 灌注之外:心血管成像中肽类放射性药物的综述。
Pub Date : 2025-11-25 DOI: 10.1038/s44303-025-00124-9
Viktoria E Krol, Vani Sharma, Joanna E Kusmirek, Maliha Zahid, Derek R Johnson, Mukesh K Pandey

Cardiology is continually evolving towards increased personalization with targeted diagnostics and therapeutics. Peptide-based radiopharmaceuticals have emerged as a valuable tool for noninvasive, receptor-specific imaging, addressing limitations of traditional perfusion-based radiotracers like [15O]H2O, [13N]NH3, [82Rb]RbCl and [99mTc]Tc-Sestamibi, which lack molecular specificity. While these conventional tracers provide crucial insights into myocardial perfusion and ventricular function, receptor-targeted imaging can illuminate the molecular mechanisms underlying cardiovascular diseases. This, in turn, offers novel insights into disease progression, enhanced diagnostic accuracy, and a tool for companion diagnostics of molecularly targeted therapeutics. Beyond receptor-mediated targeting, recent advances in cell-penetrating peptides (CPPs), such as the development of the cardiac targeting peptide (CTP), offer new opportunities for the enhanced delivery of a therapeutic payload to the injured heart. Their biodistribution can be effectively monitored using radiolabeled analogs. This review explores the role of peptide-based radiopharmaceuticals in nuclear cardiology, highlighting their applications in receptor-mediated imaging and briefly discussing non-receptor-specific CPPs. Select examples illustrate how these innovations are advancing molecular characterization of cardiovascular diseases such as fibrosis, cardiac amyloidosis, atherosclerosis, and more, reshaping the nuclear cardiology landscape.

心脏病学正在不断发展,以增加个性化有针对性的诊断和治疗。基于肽的放射性药物已成为一种有价值的无创、受体特异性成像工具,解决了传统基于灌注的放射性示踪剂(如[15O]H2O、[13N]NH3、[82Rb]RbCl和[99mTc]Tc-Sestamibi)缺乏分子特异性的局限性。虽然这些传统的示踪剂为心肌灌注和心室功能提供了重要的见解,但受体靶向成像可以阐明心血管疾病的分子机制。这反过来又为疾病进展提供了新的见解,提高了诊断准确性,并为分子靶向治疗的伴随诊断提供了工具。除了受体介导的靶向之外,细胞穿透肽(CPPs)的最新进展,如心脏靶向肽(CTP)的发展,为增强向受损心脏输送治疗有效载荷提供了新的机会。它们的生物分布可以使用放射性标记的类似物进行有效监测。本文综述了基于肽的放射性药物在核心脏病学中的作用,重点介绍了它们在受体介导成像中的应用,并简要讨论了非受体特异性CPPs。举例说明这些创新如何推进心血管疾病(如纤维化、心脏淀粉样变性、动脉粥样硬化等)的分子表征,重塑核心脏病学领域。
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引用次数: 0
One-click reconstruction in single-molecule localization microscopy via experimental parameter-aware deep learning. 基于实验参数感知深度学习的单分子定位显微镜一键重建。
Pub Date : 2025-11-25 DOI: 10.1038/s44303-025-00123-w
Alon Saguy, Dafei Xiao, Kaarjel K Narayanasamy, Yuya Nakatani, Nahima Saliba, Gabriella Gagliano, Anna-Karin Gustavsson, Mike Heilemann, Yoav Shechtman

Deep neural networks have led to significant advancements in microscopy image generation and analysis. In single-molecule localization-based super-resolution microscopy, neural networks are capable of predicting fluorophore positions from high-density emitter data, thus reducing acquisition time, and increasing imaging throughput. However, neural network-based solutions in localization microscopy require intensive human intervention and often compromise between model performance and its generalization. Researchers have to manually tune simulated training data parameters to resemble their experimental data; thus, for every change in the experimental conditions, a new training set should be manually tuned, and a new model should be trained. Here, we introduce AutoDS and AutoDS3D, two software programs for super-resolution reconstruction of single-molecule localization microscopy data that are based on Deep-STORM and DeepSTORM3D. Our methods significantly reduce human intervention from the analysis process by automatically extracting the experimental parameters from the imaging raw data. In the 2D case, AutoDS selects the optimal model for the analysis out of a set of pre-trained models, hence, completely removing user supervision from the process. In the 3D case, we improve the computation efficiency of DeepSTORM3D and integrate the lengthy workflow into a graphic user interface that enables image reconstruction with a single click. Ultimately, we demonstrate comparable or superior performance of both methods compared to Deep-STORM, DeepSTORM3D, and other state-of-the-art methods, while significantly reducing the manual labor and computation time.

深度神经网络在显微镜图像生成和分析方面取得了重大进展。在基于单分子定位的超分辨率显微镜中,神经网络能够从高密度发射器数据中预测荧光团的位置,从而减少采集时间,提高成像吞吐量。然而,基于神经网络的定位显微镜解决方案需要大量的人为干预,并且经常在模型性能和泛化之间做出妥协。研究人员必须手动调整模拟训练数据参数,使其与实验数据相似;因此,对于每一次实验条件的变化,都需要手动调整一个新的训练集,训练一个新的模型。本文介绍了基于Deep-STORM和DeepSTORM3D的单分子定位显微镜数据超分辨率重建软件AutoDS和AutoDS3D。我们的方法通过自动从成像原始数据中提取实验参数,大大减少了分析过程中的人为干预。在2D情况下,AutoDS从一组预训练的模型中选择最优模型进行分析,因此,完全消除了用户对过程的监督。在3D情况下,我们提高了DeepSTORM3D的计算效率,并将冗长的工作流程集成到图形用户界面中,只需单击即可实现图像重建。最终,我们证明了这两种方法与Deep-STORM, DeepSTORM3D和其他最先进的方法相比具有相当或更好的性能,同时显着减少了人工劳动和计算时间。
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引用次数: 0
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npj Imaging
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