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miRquad: first-in-class dPCR multiplex TaqMan™ Advanced clinical research assay for microRNA detection in head and neck cancer. miRquad:一流的dPCR多重TaqMan™高级临床研究检测头颈癌中的microRNA。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-20 DOI: 10.1186/s13046-025-03590-6
Matteo Allegretti, David J Joun, Giulia Urbani, Valentina De Pascale, Federica Ganci, Raul Pellini, Giada Anna Beltramini, Stefano Ferrero, Stefano Fiori, Tania Moccia, Chiara Ciardiello, Elena Di Gennaro, Alfredo Budillon, Luca Sigalotti, Roberta Maestro, Mario Urtis, Eloisa Arbustini, Simona De Summa, Amalia Azzariti, Stella Gagliardi, Antonio Pisani, Gennaro Ciliberto, Paola Cornelia Maria Muti, Junko F Stevens, Giovanni Blandino

Background: Cancer resistance is one of the major challenges in oncology, often resulting in disease relapse and poor patient outcomes. Within the RNA family, microRNAs (miRNAs) regulate core biological processes and have been recognized also as critical contributors of tumor resistance and therapy failure. Being pivotal, they are increasingly exploited as biomarkers in various settings. Although in silico analyses facilitate miRNAs identification, PCR-based approaches remain essential to validate their expression. Currently, a plethora of well-established, single-target methods exist but multiplex detection from the same input have been only rarely explored.

Methods: We present miRquad, the first-in-class digital PCR (dPCR) TaqMan™ multiplex clinical research assay for miRNA detection in head and neck (HNC) cancers. Based on a patented prognostic signature including miR-21-5p, miR-96-5p, miR-21-3p and miR-429, the assay would enable simultaneous miRNA analysis via qPCR and dPCR on multiple clinically relevant sample types.

Results: We designed and optimized miRquad using both synthetic controls and retrospective patient-derived tissues, sera and saliva. A multicentre ring study was conducted to evaluate assay reliability across different platforms, demonstrating strong correlation with commercial singleplexes, broad applicability, reduced turnaround time (TAT) and cost-effectiveness. Finally, we provide evidence for its potential clinical application to predict disease outcome in HNC, testing miRquad on tumoral and peritumoral tissues, sera and saliva samples collected throughout patient follow up.

Conclusions: The assay overcomes common challenges associated with multiple miRNAs detection, particularly in liquid biopsy samples (e.g., multiple pipetting issues, increased consumption of sample for multiple assessment, extended TAT for complete profiling) and provides robust and accurate detection, demonstrating potential for real-time patient monitoring and prognostication in HNC.

背景:肿瘤耐药是肿瘤学的主要挑战之一,经常导致疾病复发和患者预后不良。在RNA家族中,microRNAs (miRNAs)调节核心生物学过程,也被认为是肿瘤耐药和治疗失败的关键因素。作为关键,它们越来越多地被用作各种环境中的生物标志物。虽然在硅分析促进mirna鉴定,基于pcr的方法仍然是必要的,以验证其表达。目前,存在大量完善的单目标方法,但从相同输入进行多路检测的探索很少。方法:我们提出miRquad,一流的数字PCR (dPCR) TaqMan™多重临床研究方法,用于检测头颈部(HNC)癌症中的miRNA。基于包括miR-21-5p、miR-96-5p、miR-21-3p和miR-429在内的专利预后标记,该检测将能够通过qPCR和dPCR对多种临床相关样本类型同时进行miRNA分析。结果:我们设计并优化了miRquad,使用了合成对照和回顾性患者来源的组织、血清和唾液。进行了一项多中心环研究,以评估不同平台上检测的可靠性,证明与商业单路检测、广泛适用性、缩短周转时间(TAT)和成本效益有很强的相关性。最后,我们为其潜在的临床应用提供证据,以预测HNC的疾病结局,在患者随访期间收集的肿瘤和肿瘤周围组织,血清和唾液样本中检测miRquad。结论:该检测方法克服了与多种mirna检测相关的常见挑战,特别是在液体活检样本中(例如,多次移液问题,多次评估样品消耗增加,延长TAT以完成分析),并提供了强大而准确的检测,显示了HNC患者实时监测和预测的潜力。
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引用次数: 0
Colon-Targeted astragalus polysaccharide nanoparticles prevent NAFLD-Driven hepatocarcinogenesis via microbiota remodeling and NF-κB Inhibition. 结肠靶向黄芪多糖纳米颗粒通过微生物群重塑和NF-κB抑制抑制nafld驱动的肝癌发生。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-20 DOI: 10.1186/s13046-025-03608-z
Dan Liu, Runtian Li, Mingzhu Li, Ying Liang, Zhao Wang, Yang Sun, Pengling Ge

Hepatocellular carcinoma (HCC), often arising from liver fibrosis in nonalcoholic fatty liver disease (NAFLD), remains a leading cause of cancer-related death. Targeting the gut-liver axis offers new therapeutic opportunities to prevent this progression. In this study, colon-targeted chitosan/pectin-based nanoparticles loaded with Astragalus polysaccharide (APs-CS/PT-NPs) were developed to modulate gut microbiota and inhibit liver tumorigenesis. The nanoparticles exhibited robust physicochemical stability and pH-responsive release. In vivo, oral administration of APs-CS/PT-NPs attenuated hepatic steatosis, reduced inflammatory cytokines, and suppressed NAFLD-induced HCC development. 16 S rRNA sequencing revealed restoration of microbial diversity and enhanced production of short-chain fatty acids, especially acetate. Mechanistically, transcriptomic profiling and functional analysis identified acetate as a key mediator, acting via G-protein-coupled receptor 43 (GPR43) to inhibit the NF-κB pathway. These results highlight the therapeutic potential of APs-CS/PT-NPs in modulating the gut-liver axis, rebalancing intestinal microbiota, and suppressing pro-inflammatory signaling. This nanoparticle-based strategy offers a promising food-derived preventive intervention for liver fibrosis-HCC transition.

肝细胞癌(HCC)通常由非酒精性脂肪性肝病(NAFLD)的肝纤维化引起,仍然是癌症相关死亡的主要原因。针对肝-肠轴提供了新的治疗机会,以防止这种进展。在这项研究中,以结肠为靶点的壳聚糖/果胶为基础的负载黄芪多糖的纳米颗粒(APs-CS/PT-NPs)被开发用于调节肠道微生物群和抑制肝脏肿瘤的发生。纳米颗粒表现出强大的物理化学稳定性和ph响应释放。在体内,口服APs-CS/PT-NPs可减轻肝脂肪变性,降低炎症细胞因子,抑制nafld诱导的HCC发展。16s rRNA测序结果显示,微生物多样性得到恢复,短链脂肪酸尤其是乙酸的产量增加。机制上,转录组学分析和功能分析发现醋酸盐是一个关键的介质,通过g蛋白偶联受体43 (GPR43)抑制NF-κB通路。这些结果强调了APs-CS/PT-NPs在调节肠-肝轴、平衡肠道微生物群和抑制促炎信号传导方面的治疗潜力。这种基于纳米颗粒的策略为肝纤维化- hcc过渡提供了一种有前途的食物来源的预防性干预。
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引用次数: 0
SGSS05-NS3, a covalent SETD8 inhibitor that activates p53 pathway in neuroblastoma. SGSS05-NS3,一种激活神经母细胞瘤中p53通路的共价SETD8抑制剂。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-19 DOI: 10.1186/s13046-025-03565-7
Zhihui Liu, Sukriti Bagchi, Chunhua Yan, Ying Hu, Gil Blum, Anqi Ma, Jian Jin, Minkui Luo, Sebastiano Di Bella, Francesco Verona, Ettore Appella, Giuseppe Giannini, Carol J Thiele, Veronica Veschi
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引用次数: 0
Docetaxel induced activation of GSDME pathway and pyroptosis enhance immune lethality in prostate cancer cells. 多西紫杉醇诱导的GSDME通路激活和焦亡增强前列腺癌细胞的免疫致死性。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-18 DOI: 10.1186/s13046-025-03614-1
Ruoyang Liu, Long Zhang, Guoqing Xie, Xiang Li, Yu Liu, Ningyang Li, Aravind Raveendran, Yuankang Feng, Fubo Lu, Xiyue Deng, Junyi Li, Jinjian Yang, Zhenlin Huang, Zhankui Jia
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引用次数: 0
PXDN regulated by WTAP/YTHDF1-mediated m6A modification activates PI3K/AKT signaling pathway through extracellular matrix remodeling to promote progression in nasopharyngeal carcinoma. WTAP/ ythdf1介导的m6A修饰调控PXDN通过细胞外基质重塑激活PI3K/AKT信号通路,促进鼻咽癌的进展。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-18 DOI: 10.1186/s13046-025-03609-y
Ying Li, Zongwei Huang, Xingwu Huang, Wanzun Lin, Qin Ding, Wankai Fu, Ronghui Chen, Jinghua Lai, Jianmin Wang, Qinying Liu, Sufang Qiu
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引用次数: 0
Targeting TRIM59 impairs RNA splicing and promotes neuroblastoma differentiation and therapeutic responses. 靶向TRIM59损害RNA剪接,促进神经母细胞瘤分化和治疗反应。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-18 DOI: 10.1186/s13046-025-03573-7
Yingwen Zhang, Yi Yang, Guoyu Chen, Minzhi Yin, Yijin Gao, Yanxin Li, Haizhong Feng
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引用次数: 0
The radioenhancer NBTXR3: bridging physics and biology to improve radiotherapy outcomes and prime anti-tumor immunity. 放射增强剂NBTXR3:架起物理和生物学的桥梁,改善放射治疗效果和初始抗肿瘤免疫。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-17 DOI: 10.1186/s13046-025-03579-1
Célia Bienassis, Omar I Vivar, Yun Hu, Jordan Da Silva, Audrey Darmon, Julie Marill, Naeemunnisa Mohamed Anesary, Peter Schmitt, Laurent Levy, James Welsh, Yolanda Prezado, Frédérique Megnin-Chanet, Sébastien Paris

Radiotherapy remains a cornerstone in cancer treatment, used in over 50% of cases. It employs ionizing radiation, primarily X-rays, to target and destroy tumors through direct DNA damage and indirect effects via reactive oxygen species. Despite technological advancements improving precision of the delivered dose to the tumor, radiotherapy faces critical challenges, particularly damage to healthy tissues, which limits the maximum safe dose. Recent years have seen significant improvements in radiation delivery, including advanced imaging for real-time tumor tracking and combinations with immunotherapy. However, the need for innovative strategies to enhance radiotherapy's therapeutic index remains essential. The radioenhancer NBTXR3 could represent a solution in addressing these limitations. This nanotechnology has been designed to amplify radiotherapy's effects within tumors without increasing toxicity in non-injected adjacent healthy tissues. Beyond better cancer cell destruction and tumor control, radiotherapy-activated NBTXR3 nanoparticles can also stimulate systemic antitumor immune responses in preclinical models. This review aims to provide a comprehensive analysis of preclinical research on NBTXR3, focusing on its mechanism of action and role in initiating and enhancing antitumor immune responses.

放疗仍然是癌症治疗的基石,在50%以上的病例中使用。它利用电离辐射,主要是x射线,通过直接的DNA损伤和通过活性氧的间接作用来靶向和摧毁肿瘤。尽管技术进步提高了向肿瘤输送剂量的精度,但放射治疗面临着严峻的挑战,特别是对健康组织的损伤,这限制了最大安全剂量。近年来,放射治疗有了显著的进步,包括用于实时肿瘤跟踪的先进成像和与免疫治疗的结合。然而,需要创新的策略,以提高放疗的治疗指数仍然是必不可少的。辐射增强器NBTXR3可能是解决这些限制的一种解决方案。这种纳米技术旨在增强肿瘤内放射治疗的效果,而不会增加对未注射的邻近健康组织的毒性。除了更好地破坏癌细胞和控制肿瘤外,放疗激活的NBTXR3纳米颗粒还可以在临床前模型中刺激全身抗肿瘤免疫反应。本文综述了NBTXR3的临床前研究进展,重点介绍了NBTXR3的作用机制及其在启动和增强抗肿瘤免疫应答中的作用。
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引用次数: 0
COX-2/PGE2 axis blockade with celecoxib enhances anti-PD-1 efficacy by activating natural killer cells for residual hepatocellular carcinoma after radiofrequency ablation. 塞来昔布阻断COX-2/PGE2轴通过激活自然杀伤细胞对射频消融后残留的肝细胞癌增强抗pd -1疗效。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-17 DOI: 10.1186/s13046-025-03582-6
Yu Lei, Yaowei Bai, Xiatong Bai, Bo Sun, Licheng Zhu, Wenlong Wu, Yang Su, Hongsen Zhang, Yingliang Wang, Chuansheng Zheng
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引用次数: 0
HDAC2 as a therapeutic target in bladder cancer: insights into the altered epigenetic regulation and lysine lactylation. HDAC2作为膀胱癌的治疗靶点:改变表观遗传调控和赖氨酸乳酸化的见解。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-17 DOI: 10.1186/s13046-025-03610-5
Guanghui Xu, Shuo Liang, Ganlin Hu, Wei Zhao, Yuqin Li, Minghao Zheng, Zhigang Wu, Tianlei Xie, Shuting Fang, Shan Peng, Yongming Deng, Yihua Zhou, Hongqian Guo, Junlong Zhuang, Wenli Diao

Background: The pathogenesis of bladder cancer (BCa) is driven in part by aberrant epigenetic regulation, most notably the dysregulated expression of histone deacetylases (HDACs). As a class I HDAC, HDAC2 is often overexpressed in cancers and promotes malignancy through diverse mechanisms. Given its broad oncogenic role, an in-depth investigation of its specific functions in epigenetic and post-translational regulation within BCa holds significant promise for developing novel precision therapies.

Methods: In vitro functional assays, including CCK-8, colony formation, transwell and apoptotic assays, as well as in vivo assays in a nude mouse subcutaneous tumor model, were performed to assess the oncogenic and drug-resistant effects of HDAC2. RNA-seq and ATAC-seq were employed to analyze the epigenetic regulatory mechanisms of HDAC2. Combined proteome, lactylome and acetylome analysis of control and HDAC2-overexpressing BCa cells were conducted to map the global profiling of protein lysine acetylation (Kac) and lactylation (Kla).

Results: In vitro and in vivo experiments confirmed that HDAC2 overexpression significantly promoted proliferation, metastasis and chemoresistance of BCa. Integrated RNA-seq and ATAC-seq analysis revealed that HDAC2 overexpression led to significant epigenetic alternations, and knockdown of its downstream GRIK2 significantly reversed the oncogenic effects of HDAC2. We screened class I HDACs for their impact on Kac and Kla in BCa cells and found that HDAC2 most significantly reduced global Kla levels. Subsequent proteomic analysis of HDAC2-overexpressing cells identified 528 differentially regulated Kla proteins (encompassing 683 sites) and 1,129 differentially regulated Kac proteins (encompassing 1,458 sites). Notably, DHX15 in the splicesome pathway emerged as the most prominent HDAC2-regulated lactylated protein in the absence of concurrent Kac alterations. Moreover, HDAC2 promoted BCa malignancy through the downregulation of DHX15 Kla and the subsequent modulation of RPL9 splicing.

Conclusion: Collectively, these findings suggest the pivotal role of HDAC2 in epigenetic modulation and lysine lactylation, and underscore HDAC2 as a promising therapeutic target in BCa.

背景:膀胱癌(BCa)的发病机制部分是由异常的表观遗传调控驱动的,最显著的是组蛋白去乙酰化酶(hdac)的表达失调。作为一类HDAC, HDAC2在癌症中经常过表达,并通过多种机制促进恶性肿瘤的发生。鉴于其广泛的致癌作用,深入研究其在BCa内的表观遗传和翻译后调控中的特定功能为开发新的精确治疗方法带来了重大希望。方法:通过CCK-8、菌落形成、transwell和凋亡等体外功能实验,以及裸鼠皮下肿瘤模型的体内实验,评估HDAC2的致瘤和耐药作用。采用RNA-seq和ATAC-seq分析HDAC2的表观遗传调控机制。对对照组和过表达hdac2的BCa细胞进行蛋白质组学、乳酸组学和乙酰组学分析,绘制蛋白质赖氨酸乙酰化(Kac)和乳酸化(Kla)的全局图谱。结果:体外和体内实验证实,HDAC2过表达可显著促进BCa的增殖、转移和化疗耐药。综合RNA-seq和ATAC-seq分析显示,HDAC2过表达导致显著的表观遗传改变,其下游GRIK2的下调显著逆转了HDAC2的致癌作用。我们筛选了I类hdac对BCa细胞中Kac和Kla的影响,发现HDAC2最显著地降低了全球Kla水平。随后对hdac2过表达细胞进行蛋白质组学分析,鉴定出528个差异调节的Kla蛋白(包含683个位点)和1129个差异调节的Kac蛋白(包含1458个位点)。值得注意的是,在没有同时发生Kac改变的情况下,剪接体途径中的DHX15成为最突出的hdac2调节的乳酸化蛋白。此外,HDAC2通过下调DHX15 Kla并随后调节RPL9剪接来促进BCa恶性肿瘤。结论:这些发现表明HDAC2在表观遗传调控和赖氨酸乳酸化中起关键作用,并强调HDAC2是BCa的一个有希望的治疗靶点。
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引用次数: 0
Targeting E2F8 sensitizes gemcitabine-resistant gallbladder cancer to PARP inhibitors by disrupting RRM2-driven DNA repair. 靶向E2F8通过破坏rrm2驱动的DNA修复使耐吉西他滨胆囊癌对PARP抑制剂敏感。
IF 12.8 1区 医学 Q1 ONCOLOGY Pub Date : 2025-12-14 DOI: 10.1186/s13046-025-03586-2
Xiaojian Ni, Min Li, Wenqing Qiu, Jichang Han, Meng Yu, Shulong Zhang, Bohao Zheng, Jiaqi He, Houbao Liu
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引用次数: 0
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Journal of Experimental & Clinical Cancer Research
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