Pub Date : 2024-06-12DOI: 10.3390/horticulturae10060628
Longfei Jin, Xinxing Yin, Mingxia Wen, Bei Huang, Feng Liu, Xinguo Li, Peng Wang
Potassium is an essential mineral nutrient for citrus growth and stress response. In this study, the HAK/KUP/KT gene family was identified from the genome of trifoliate orange (Poncirus trifoliata). The physical and chemical properties, chromosomal location, gene structure, evolutionary relationship, conserved motifs, and tissue expression characteristics were analyzed. The expression characteristics under low potassium and salt stress were analyzed by fluorescence quantitative PCR. The function of PtKUP10 was investigated by heterologous expression in Arabidopsis thaliana. The results showed that at least 18 PtKUPs were distributed in seven chromosomes. Phylogenetic analysis showed that four PtKUPs clustered in clade I, which mediated the high-affinity potassium absorption. Gene expression analysis showed that four PtKUPs were highly expressed in root, seven PtKUPs were up-regulated by low potassium stress, and nine PtKUPs were up-regulated by salt stress. The cis-acting elements on the promoter of PtKUPs were predominantly involved in stress and hormone responses. Overexpression of PtKUP10 in Arabidopsis thaliana could enhance salt tolerance by accumulating more potassium in the shoot and reducing sodium content in the shoots and roots. These results indicated that PtKUPs play important roles in potassium absorption and salt stress response, and PtKUP10 might enhance salt tolerance by maintaining potassium and sodium homeostasis.
{"title":"Genome-Wide Identification, Characterization, and Expression of the HAK/KUP/KT Potassium Transporter Gene Family in Poncirus trifoliata and Functional Analysis of PtKUP10 under Salt Stress","authors":"Longfei Jin, Xinxing Yin, Mingxia Wen, Bei Huang, Feng Liu, Xinguo Li, Peng Wang","doi":"10.3390/horticulturae10060628","DOIUrl":"https://doi.org/10.3390/horticulturae10060628","url":null,"abstract":"Potassium is an essential mineral nutrient for citrus growth and stress response. In this study, the HAK/KUP/KT gene family was identified from the genome of trifoliate orange (Poncirus trifoliata). The physical and chemical properties, chromosomal location, gene structure, evolutionary relationship, conserved motifs, and tissue expression characteristics were analyzed. The expression characteristics under low potassium and salt stress were analyzed by fluorescence quantitative PCR. The function of PtKUP10 was investigated by heterologous expression in Arabidopsis thaliana. The results showed that at least 18 PtKUPs were distributed in seven chromosomes. Phylogenetic analysis showed that four PtKUPs clustered in clade I, which mediated the high-affinity potassium absorption. Gene expression analysis showed that four PtKUPs were highly expressed in root, seven PtKUPs were up-regulated by low potassium stress, and nine PtKUPs were up-regulated by salt stress. The cis-acting elements on the promoter of PtKUPs were predominantly involved in stress and hormone responses. Overexpression of PtKUP10 in Arabidopsis thaliana could enhance salt tolerance by accumulating more potassium in the shoot and reducing sodium content in the shoots and roots. These results indicated that PtKUPs play important roles in potassium absorption and salt stress response, and PtKUP10 might enhance salt tolerance by maintaining potassium and sodium homeostasis.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"107 21","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141352386","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-12DOI: 10.3390/horticulturae10060630
Yongjun Kim, Y. Byun, Sang-Joon Lee
Despite the increasing attention on smart farms as a solution to rural issues such as aging agricultural populations, a shortage of young farmers, decreased production area, and reduced investment leading to stagnant income, exports, and growth rates, many farms still rely on traditional methods like cultivating tangerines in open fields. Despite this, increasing farm income requires producing high-quality tangerines and selling them at premium prices, with fruit sweetness being a crucial factor. Therefore, there is a need to examine the close correlation between tangerine quality and sweetness. In this paper, we use deep learning with the PyCaret library to predict and analyze tangerine sweetness using data from seven regions in Jeju and 13 comprehensive factors influencing sweetness, including terrain, temperature, humidity, precipitation, sunlight, wind speed, acidity, sugar-acid ratio, and others. Although applying all 13 factors could achieve over 90% accuracy, our study, limited to seven factors, still achieves a respectable 82.4% prediction accuracy, demonstrating the significant impact of weather data on sweetness. Moreover, these optimistic predictions enable the estimation of tangerine quality and price formation in the market for the coming year, allowing tangerine farmers and related agencies to respond to market conditions proactively. Furthermore, by applying these data to smart farms to control factors influencing tangerine sweetness, it is anticipated that high-quality tangerine production and increased farm income can be achieved.
{"title":"A Study on Sugar Content Improvement and Distribution Flow Response through Citrus Sugar Content Prediction Based on the PyCaret Library","authors":"Yongjun Kim, Y. Byun, Sang-Joon Lee","doi":"10.3390/horticulturae10060630","DOIUrl":"https://doi.org/10.3390/horticulturae10060630","url":null,"abstract":"Despite the increasing attention on smart farms as a solution to rural issues such as aging agricultural populations, a shortage of young farmers, decreased production area, and reduced investment leading to stagnant income, exports, and growth rates, many farms still rely on traditional methods like cultivating tangerines in open fields. Despite this, increasing farm income requires producing high-quality tangerines and selling them at premium prices, with fruit sweetness being a crucial factor. Therefore, there is a need to examine the close correlation between tangerine quality and sweetness. In this paper, we use deep learning with the PyCaret library to predict and analyze tangerine sweetness using data from seven regions in Jeju and 13 comprehensive factors influencing sweetness, including terrain, temperature, humidity, precipitation, sunlight, wind speed, acidity, sugar-acid ratio, and others. Although applying all 13 factors could achieve over 90% accuracy, our study, limited to seven factors, still achieves a respectable 82.4% prediction accuracy, demonstrating the significant impact of weather data on sweetness. Moreover, these optimistic predictions enable the estimation of tangerine quality and price formation in the market for the coming year, allowing tangerine farmers and related agencies to respond to market conditions proactively. Furthermore, by applying these data to smart farms to control factors influencing tangerine sweetness, it is anticipated that high-quality tangerine production and increased farm income can be achieved.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"85 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141352774","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-11DOI: 10.3390/horticulturae10060623
Christina Topali, C. Antonopoulou, Christos Chatzissavvidis
Τhe production of fresh fruit as well as olive orchards is increasing around the world, in order to meet the global demand for both fruits and olive products. This results in the spread and establishment of fruit and olive tree cultivation in areas where they were not found before, for example, plains and lowlands prone to waterlogging. Climate change is having a significant impact on the natural environment. Agricultural open-field crops have less growth and yield under these harsh weather conditions. Nowadays, unpredictable rainfall more often exposes field crops to waterlogging on a regular basis. This is a very stressful factor which can cause a reduction in yield and even total crop elimination. In this review, the morphological and physiological parameters affected by waterlogging are developed in order to understand better how olive and other fruit crops respond to waterlogging conditions and how this affects their development and productivity. Having a better understanding of these mechanisms can help us design strategies and approaches to increase fruit crop resistance to waterlogging stress.
{"title":"Effect of Waterlogging on Growth and Productivity of Fruit Crops","authors":"Christina Topali, C. Antonopoulou, Christos Chatzissavvidis","doi":"10.3390/horticulturae10060623","DOIUrl":"https://doi.org/10.3390/horticulturae10060623","url":null,"abstract":"Τhe production of fresh fruit as well as olive orchards is increasing around the world, in order to meet the global demand for both fruits and olive products. This results in the spread and establishment of fruit and olive tree cultivation in areas where they were not found before, for example, plains and lowlands prone to waterlogging. Climate change is having a significant impact on the natural environment. Agricultural open-field crops have less growth and yield under these harsh weather conditions. Nowadays, unpredictable rainfall more often exposes field crops to waterlogging on a regular basis. This is a very stressful factor which can cause a reduction in yield and even total crop elimination. In this review, the morphological and physiological parameters affected by waterlogging are developed in order to understand better how olive and other fruit crops respond to waterlogging conditions and how this affects their development and productivity. Having a better understanding of these mechanisms can help us design strategies and approaches to increase fruit crop resistance to waterlogging stress.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"86 7","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141357706","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-11DOI: 10.3390/horticulturae10060622
Junhao Li, Yuchen Ma, Tingting Cui, Shaohua Liu, Liulin Li
Salicylic acid (SA) is known to be an efficient elicitor of secondary metabolism in plants. Arbutin, a characteristic phenolic glycoside found in ‘Yuluxiang’ pear (Pyrus bretschneideri Rehder × Pyrus sinkiangensis Yu), is widely used in lightening agents, in addition to cough, anti-inflammatory, and anti-microbial remedies, among other applications. However, research into the synthesis of arbutin in pear is limited. This study aimed to clarify the effect of exogenous SA on the arbutin content of pear using HPLC and investigate the mechanism for arbutin accumulation using RNA-Seq analysis. HPLC revealed that SA increased the arbutin contents of leaf, fruit, and callus in pear and demonstrated that the effect of SA is concentration and time dependent. RNA-Seq analysis of pear callus treated with or without SA revealed 380 differentially expressed genes (DEGs), 335 of which were up-regulated. According to a KEGG database analysis, the highest number of genes were annotated for phenylpropane biosynthesis. Overall, 21 DEGs were found to be involved in the synthesis of hydroquinone and UDP-glucose, which are substrates of arbutin synthesis. It is noteworthy that the expression levels of three up-regulated genes (Pbr006844.1, Pbr021064.1 and Pbr021069.1) related to hydroquinone glycosyltransferase were induced by SA and hydroquinone. Furthermore, transient overexpression of PbUGT72B1 (Pbr021069.1) increased the arbutin content in pear callus. These data explain the regulation of gene transcription associated with the promotive effect of SA on arbutin biosynthesis in pear, thus providing a theoretical foundation for enhancing the arbutin content of fruit through genetic engineering.
{"title":"Transcriptome Profiling Reveals Potential Genes Involved in Salicylic Acid-Induced Arbutin Synthesis in Pear","authors":"Junhao Li, Yuchen Ma, Tingting Cui, Shaohua Liu, Liulin Li","doi":"10.3390/horticulturae10060622","DOIUrl":"https://doi.org/10.3390/horticulturae10060622","url":null,"abstract":"Salicylic acid (SA) is known to be an efficient elicitor of secondary metabolism in plants. Arbutin, a characteristic phenolic glycoside found in ‘Yuluxiang’ pear (Pyrus bretschneideri Rehder × Pyrus sinkiangensis Yu), is widely used in lightening agents, in addition to cough, anti-inflammatory, and anti-microbial remedies, among other applications. However, research into the synthesis of arbutin in pear is limited. This study aimed to clarify the effect of exogenous SA on the arbutin content of pear using HPLC and investigate the mechanism for arbutin accumulation using RNA-Seq analysis. HPLC revealed that SA increased the arbutin contents of leaf, fruit, and callus in pear and demonstrated that the effect of SA is concentration and time dependent. RNA-Seq analysis of pear callus treated with or without SA revealed 380 differentially expressed genes (DEGs), 335 of which were up-regulated. According to a KEGG database analysis, the highest number of genes were annotated for phenylpropane biosynthesis. Overall, 21 DEGs were found to be involved in the synthesis of hydroquinone and UDP-glucose, which are substrates of arbutin synthesis. It is noteworthy that the expression levels of three up-regulated genes (Pbr006844.1, Pbr021064.1 and Pbr021069.1) related to hydroquinone glycosyltransferase were induced by SA and hydroquinone. Furthermore, transient overexpression of PbUGT72B1 (Pbr021069.1) increased the arbutin content in pear callus. These data explain the regulation of gene transcription associated with the promotive effect of SA on arbutin biosynthesis in pear, thus providing a theoretical foundation for enhancing the arbutin content of fruit through genetic engineering.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"14 12","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141356248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-11DOI: 10.3390/horticulturae10060621
Luisa Liu-Xu, A. I. González-Hernández, Gemma Camañes, B. Vicedo, Loredana Scalschi, E. Llorens
The health of soil is paramount for sustaining life, as it hosts diverse communities of microorganisms that interact with plants, influencing their growth, health, and resilience. Beneficial microorganisms, including fungi and bacteria, form symbiotic relationships with plants, providing essential nutrients, promoting growth, and enhancing stress tolerance. These microorganisms, such as mycorrhizal fungi and plant growth-promoting bacteria, play crucial roles in nutrient cycling, soil health, and plant productivity. Additionally, they help lessen reliance on chemical fertilizers, thereby mitigating the environmental risks associated with their use. Advances in agricultural practices harness the potential of these beneficial microorganisms to improve crop yields while minimizing the environmental impact. However, challenges such as competition with indigenous microbial strains and environmental factors limit the universal utilization of microbial inoculants. Despite these challenges, understanding and leveraging the interactions between plants and beneficial microorganisms hold promise for sustainable agriculture and enhanced food security.
{"title":"Harnessing Green Helpers: Nitrogen-Fixing Bacteria and Other Beneficial Microorganisms in Plant–Microbe Interactions for Sustainable Agriculture","authors":"Luisa Liu-Xu, A. I. González-Hernández, Gemma Camañes, B. Vicedo, Loredana Scalschi, E. Llorens","doi":"10.3390/horticulturae10060621","DOIUrl":"https://doi.org/10.3390/horticulturae10060621","url":null,"abstract":"The health of soil is paramount for sustaining life, as it hosts diverse communities of microorganisms that interact with plants, influencing their growth, health, and resilience. Beneficial microorganisms, including fungi and bacteria, form symbiotic relationships with plants, providing essential nutrients, promoting growth, and enhancing stress tolerance. These microorganisms, such as mycorrhizal fungi and plant growth-promoting bacteria, play crucial roles in nutrient cycling, soil health, and plant productivity. Additionally, they help lessen reliance on chemical fertilizers, thereby mitigating the environmental risks associated with their use. Advances in agricultural practices harness the potential of these beneficial microorganisms to improve crop yields while minimizing the environmental impact. However, challenges such as competition with indigenous microbial strains and environmental factors limit the universal utilization of microbial inoculants. Despite these challenges, understanding and leveraging the interactions between plants and beneficial microorganisms hold promise for sustainable agriculture and enhanced food security.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"70 7","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141358038","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-11DOI: 10.3390/horticulturae10060624
Wenjun Huang, Suyun Shen, Zhouqian Wang, Jie Yang, Haiyan Lv, Hua Tian, J. Burdon, Caihong Zhong
Fruit storage is optimized at the lowest safe temperature to maximize storage life whilst avoiding chilling or freezing injury. The few published studies of freezing in kiwifruit (Actinidia spp.) have been conducted with A. chinensis var. deliciosa ‘Hayward’ fruit, with freezing temperatures reported in the range of −1.5 °C to −2.5 °C. In China, a large number of kiwifruit cultivars have been commercialized recently, with at least ten being commonly planted. In this research, freshly harvested fruits from 45 kiwifruit germplasm accessions were measured for freezing point, soluble solids content (SSC) and water content (WC). The difference in freezing point of different tissue zones within a fruit and after different periods of cold storage were determined for the fruit of three representative main cultivars: the green-fleshed ‘Hayward’, the red-fleshed A. chinensis var. chinensis ‘Donghong’, and the yellow-fleshed interspecific hybrid A. eriantha × A. chinensis ‘Jinyan’. The the freezing point of kiwifruit was found to be highly correlated with the SSC. This relationship was found irrespective of whether the measurement was made at harvest, at different places in the fruit, or after ripening during storage. These findings agree with previous reports for kiwifruit and other fruits, although it appears that the relationship may differ among kiwifruit cultivars, something not previously reported and which requires further confirmation.
果实贮藏的最佳温度是最低安全温度，以最大限度地延长贮藏寿命，同时避免冷藏或冷冻伤害。已发表的关于猕猴桃（Actinidia spp.）冷冻的研究很少，研究对象是 A. chinensis var. deliciosa 'Hayward'果实，据报道冷冻温度在 -1.5 °C 至 -2.5 °C 之间。在中国，最近有大量猕猴桃栽培品种实现了商业化，至少有 10 个品种被普遍种植。本研究测量了 45 个猕猴桃种质登录品系的新鲜采收果实的冰点、可溶性固形物含量（SSC）和含水量（WC）。测定了绿肉猕猴桃品种 "Hayward"、红肉猕猴桃品种 "Donghong "和黄肉猕猴桃种间杂交品种 "A. eriantha × A. chinensis 'Jinyan'"三个代表性主要栽培品种果实内部不同组织区域和不同冷藏期后冰点的差异。研究发现，猕猴桃的凝固点与 SSC 高度相关。无论测量是在收获时、果实的不同部位还是在贮藏过程中成熟后进行，都能发现这种关系。这些发现与之前有关猕猴桃和其他水果的报道一致，不过，不同猕猴桃栽培品种之间的关系可能有所不同，这一点之前没有报道，需要进一步证实。
{"title":"Freezing Points of Fruit from Different Kiwifruit Genotypes at Harvest and during Cold Storage","authors":"Wenjun Huang, Suyun Shen, Zhouqian Wang, Jie Yang, Haiyan Lv, Hua Tian, J. Burdon, Caihong Zhong","doi":"10.3390/horticulturae10060624","DOIUrl":"https://doi.org/10.3390/horticulturae10060624","url":null,"abstract":"Fruit storage is optimized at the lowest safe temperature to maximize storage life whilst avoiding chilling or freezing injury. The few published studies of freezing in kiwifruit (Actinidia spp.) have been conducted with A. chinensis var. deliciosa ‘Hayward’ fruit, with freezing temperatures reported in the range of −1.5 °C to −2.5 °C. In China, a large number of kiwifruit cultivars have been commercialized recently, with at least ten being commonly planted. In this research, freshly harvested fruits from 45 kiwifruit germplasm accessions were measured for freezing point, soluble solids content (SSC) and water content (WC). The difference in freezing point of different tissue zones within a fruit and after different periods of cold storage were determined for the fruit of three representative main cultivars: the green-fleshed ‘Hayward’, the red-fleshed A. chinensis var. chinensis ‘Donghong’, and the yellow-fleshed interspecific hybrid A. eriantha × A. chinensis ‘Jinyan’. The the freezing point of kiwifruit was found to be highly correlated with the SSC. This relationship was found irrespective of whether the measurement was made at harvest, at different places in the fruit, or after ripening during storage. These findings agree with previous reports for kiwifruit and other fruits, although it appears that the relationship may differ among kiwifruit cultivars, something not previously reported and which requires further confirmation.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"3 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141356209","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-11DOI: 10.3390/horticulturae10060625
Guiyan Huang, Fuxuan Li, Yanan Hu, Zhigang Ouyang, Ruimin Li
Reactive oxygen species (ROS) are pivotal in signal transduction processes in plant–pathogen interactions. The ROS signaling pathways involved in Candidatus Liberibacter asiaticus (CLas) and Xanthomonas citri subspecies citri (Xcc) infections in Citrus sinensis (sweet orange) are unclear. In this study, we comprehensively identified ROS metabolism-associated genes, including 9 NADPH oxidase (RBOH), 14 superoxide dismutase (SOD), 1 catalase (CAT), 9 peroxiredoxin (PrxR), 5 ascorbate peroxidase (APX), 4 glutathione peroxidase (GPX), 3 monodehydroascorbate reductase (MDAR), 2 dehydroascorbate reductase (DHAR), 2 glutathione reductase (GR), 24 thioredoxin (Trx), and 18 glutaredoxin (GLR) genes in C. sinensis. An analysis revealed variable gene structures but conserved motifs and domains in ROS subfamilies. A comparative synteny analysis with Arabidopsis thaliana and Vitis vinifera indicated evolutionary conservation of most ROS metabolism-associated genes, with some originating from gene duplication events post-species divergence in C. sinensis. Expression profiling revealed five up-regulated genes and four down-regulated genes during both CLas and Xcc infections. Promoter analysis revealed numerous stress-responsive elements in the promoter of ROS metabolism-associated genes. Protein–protein interaction network analysis highlighted the involvement of ROS metabolism in various biological processes. A comparison of ROS metabolism-associated genes between C. sinensis and Poncirus trifoliata indicated multiple gene gain and loss events within ROS subfamilies of C. sinensis. This study enhances our understanding of ROS metabolism in C. sinensis and sheds light on citrus–pathogen interactions.
{"title":"Comprehensive Analysis of Genes Associated with the Reactive Oxygen Species Metabolism in Citrus sinensis during Pathogen Infection","authors":"Guiyan Huang, Fuxuan Li, Yanan Hu, Zhigang Ouyang, Ruimin Li","doi":"10.3390/horticulturae10060625","DOIUrl":"https://doi.org/10.3390/horticulturae10060625","url":null,"abstract":"Reactive oxygen species (ROS) are pivotal in signal transduction processes in plant–pathogen interactions. The ROS signaling pathways involved in Candidatus Liberibacter asiaticus (CLas) and Xanthomonas citri subspecies citri (Xcc) infections in Citrus sinensis (sweet orange) are unclear. In this study, we comprehensively identified ROS metabolism-associated genes, including 9 NADPH oxidase (RBOH), 14 superoxide dismutase (SOD), 1 catalase (CAT), 9 peroxiredoxin (PrxR), 5 ascorbate peroxidase (APX), 4 glutathione peroxidase (GPX), 3 monodehydroascorbate reductase (MDAR), 2 dehydroascorbate reductase (DHAR), 2 glutathione reductase (GR), 24 thioredoxin (Trx), and 18 glutaredoxin (GLR) genes in C. sinensis. An analysis revealed variable gene structures but conserved motifs and domains in ROS subfamilies. A comparative synteny analysis with Arabidopsis thaliana and Vitis vinifera indicated evolutionary conservation of most ROS metabolism-associated genes, with some originating from gene duplication events post-species divergence in C. sinensis. Expression profiling revealed five up-regulated genes and four down-regulated genes during both CLas and Xcc infections. Promoter analysis revealed numerous stress-responsive elements in the promoter of ROS metabolism-associated genes. Protein–protein interaction network analysis highlighted the involvement of ROS metabolism in various biological processes. A comparison of ROS metabolism-associated genes between C. sinensis and Poncirus trifoliata indicated multiple gene gain and loss events within ROS subfamilies of C. sinensis. This study enhances our understanding of ROS metabolism in C. sinensis and sheds light on citrus–pathogen interactions.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"83 15","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141357628","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-10DOI: 10.3390/horticulturae10060620
P. Soriano, Reyes Mora, E. Estrelles, M. I. Martínez-Nieto
As a consequence of climate change, temperature and rainfall regimes are being modified, threatening the survival of the current gardening concept in many areas of the world. This situation highlights the need to investigate the potential of other species, especially in more sensitive areas such as the Mediterranean Basin. The aim of this research is to study the resilience of adapted species to promote sustainable gardening. To achieve this, seven species belonging to three families (Amaranthaceae, Lamiaceae and Asteraceae) used or potentially used as ornamentals were selected to compare their tolerance at the germinative stage to different levels of temperature (10 °C to 35 °C) and water stress created by PEG 6000 (−0.10 MPa to −2.5 MPa). Germination percentage, mean germination time, base temperature, thermal time, base water potential and hydrotime were calculated. The results showed a good response to high temperature and low osmotic potential in most of the species, and germination even increased under certain stress levels. Salsola oppositifolia presented by far the best results in terms of germination under high-water-stress conditions and the second best at high temperatures. The extraordinary response of Celosia argentea, an alien species, highlighted the risk of it becoming an invasive species.
{"title":"Comparison of the Climate Change Tolerance of Native and Non-Native Species Used or Potentially Used as Ornamentals in Mediterranean Areas","authors":"P. Soriano, Reyes Mora, E. Estrelles, M. I. Martínez-Nieto","doi":"10.3390/horticulturae10060620","DOIUrl":"https://doi.org/10.3390/horticulturae10060620","url":null,"abstract":"As a consequence of climate change, temperature and rainfall regimes are being modified, threatening the survival of the current gardening concept in many areas of the world. This situation highlights the need to investigate the potential of other species, especially in more sensitive areas such as the Mediterranean Basin. The aim of this research is to study the resilience of adapted species to promote sustainable gardening. To achieve this, seven species belonging to three families (Amaranthaceae, Lamiaceae and Asteraceae) used or potentially used as ornamentals were selected to compare their tolerance at the germinative stage to different levels of temperature (10 °C to 35 °C) and water stress created by PEG 6000 (−0.10 MPa to −2.5 MPa). Germination percentage, mean germination time, base temperature, thermal time, base water potential and hydrotime were calculated. The results showed a good response to high temperature and low osmotic potential in most of the species, and germination even increased under certain stress levels. Salsola oppositifolia presented by far the best results in terms of germination under high-water-stress conditions and the second best at high temperatures. The extraordinary response of Celosia argentea, an alien species, highlighted the risk of it becoming an invasive species.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":"108 10","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141361351","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-10DOI: 10.3390/horticulturae10060617
S. Kimani, Shuxian Wang, Jinyi Xie, Tingting Bao, Xiaotong Shan, Hongjie Li, Adnan, Li Wang, Xiang Gao, Yueqing Li
Floral scent is an essential and genetically complex trait in herbaceous peonies (Paeonia lactiflora Pall.); however, specific genes related to metabolic and regulatory networks remain scantily studied. Our study integrated metabolite profiling and RNA-sequencing to screen floral scent biosynthetic genes. Hence, the major molecules identified by headspace collection combined with cultivar-specific GC-MS analysis were geraniol, β-caryophyllene, 2-phenylethanol (2-PE), citronellol, and 1,8-cineole. Genes related to terpenoids and 2-PE biosynthesis were identified after the assembly and annotation of the P. lactiflora transcriptomes. Eight angiosperm-specific terpene synthases (TPSs) from the TPS-a and TPS-b clades, as well as enzymes linked to 2-PE synthesis such as aromatic amino acid decarboxylase (AADC), phenylacetaldehyde reductase (PAR), and geranial reductase (GER) were identified. The biochemical analysis of the enzymes encoded by PlPAR1 and PlGER1 generated 2-PE from phenylacetaldehyde (PAld). The pairwise alignment of AADC1 reveals a splice variant lacking a 124 bp fragment, thus highlighting the possible role of alternative splicing in modulating floral scent composition. This study offers insights into the molecular-level biosynthesis of terpenoids and 2-PE in Peonia taxa, and provides the basis for the functional characterization, breeding, and bioengineering of prospective candidate genes for the production of floral volatiles in the Paeonia genus.
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Pub Date : 2024-06-10DOI: 10.3390/horticulturae10060618
Sang Tae Kim, M. Sang
Climate change exacerbates drought, globally impacting crop production and necessitating the adoption of sustainable strategies. This study investigates the potential synergistic effects of salicylic acid (SA) and Bacillus butanolivorans KJ40 (KJ40) on napa cabbage (Brassica rapa subsp. pekinensis) under water-deficit stress conditions by watering withheld for five days. Results demonstrate that the combined application of KJ40 and SA, particularly at concentrations of 0.5 mM and 1 mM, significantly enhances plant growth and mitigates the negative impacts of water deficit. Moreover, the combination treatment with SA (0.5 mM) and KJ40 (1 × 108 cells/mL) reduces lipid oxidation and enhances antioxidant enzyme activity, indicating improved plant stress tolerance. Analysis of soil microbial profiles reveals alterations in metabolic activity and substrate utilization patterns, suggesting potential changes in rhizosphere dynamics. Additionally, this study examines the impact of SA on KJ40 population dynamics in soil, revealing concentration-dependent effects on bacterial survival. Overall, the combination of KJ40 and SA was effective in mitigating water-deficit stress in napa cabbage. These findings highlight the combination as a novel synergistic strategy to enhance plant resilience to water-deficit stress, offering insights into plant–microbe interactions and soil ecosystem dynamics.
气候变化加剧了干旱，对全球作物生产造成影响，因此必须采取可持续战略。本研究调查了水杨酸（SA）和丁醇杆菌 KJ40（KJ40）对缺水胁迫条件下的纳帕甘蓝（Brassica rapa subsp.结果表明，联合施用 KJ40 和 SA（尤其是浓度为 0.5 mM 和 1 mM 时）能显著促进植物生长，减轻缺水的负面影响。此外，SA（0.5 毫摩尔）和 KJ40（1 × 108 个细胞/毫升）的联合处理可减少脂质氧化，提高抗氧化酶活性，从而提高植物的抗逆性。对土壤微生物剖面的分析表明，代谢活动和底物利用模式发生了变化，这表明根圈动力学可能发生了变化。此外，本研究还探讨了 SA 对土壤中 KJ40 种群动态的影响，揭示了浓度对细菌存活率的影响。总体而言，KJ40 和 SA 的组合能有效缓解油菜的缺水胁迫。这些发现凸显了这一组合是一种新型的协同策略，可增强植物对缺水胁迫的恢复能力，为植物与微生物的相互作用和土壤生态系统动力学提供了启示。
{"title":"Synergistic Effects of Salicylic Acid and Bacillus butanolivorans KJ40 for Enhancing Napa Cabbage (Brassica napa subsp. pekinensis) Resilience to Water-Deficit Stress","authors":"Sang Tae Kim, M. Sang","doi":"10.3390/horticulturae10060618","DOIUrl":"https://doi.org/10.3390/horticulturae10060618","url":null,"abstract":"Climate change exacerbates drought, globally impacting crop production and necessitating the adoption of sustainable strategies. This study investigates the potential synergistic effects of salicylic acid (SA) and Bacillus butanolivorans KJ40 (KJ40) on napa cabbage (Brassica rapa subsp. pekinensis) under water-deficit stress conditions by watering withheld for five days. Results demonstrate that the combined application of KJ40 and SA, particularly at concentrations of 0.5 mM and 1 mM, significantly enhances plant growth and mitigates the negative impacts of water deficit. Moreover, the combination treatment with SA (0.5 mM) and KJ40 (1 × 108 cells/mL) reduces lipid oxidation and enhances antioxidant enzyme activity, indicating improved plant stress tolerance. Analysis of soil microbial profiles reveals alterations in metabolic activity and substrate utilization patterns, suggesting potential changes in rhizosphere dynamics. Additionally, this study examines the impact of SA on KJ40 population dynamics in soil, revealing concentration-dependent effects on bacterial survival. Overall, the combination of KJ40 and SA was effective in mitigating water-deficit stress in napa cabbage. These findings highlight the combination as a novel synergistic strategy to enhance plant resilience to water-deficit stress, offering insights into plant–microbe interactions and soil ecosystem dynamics.","PeriodicalId":507445,"journal":{"name":"Horticulturae","volume":" May","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141364641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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