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Evidence supporting the concept of a regionalized distribution of testate amoebae in the Arctic 支持北极地区遗存变形虫区域化分布概念的证据
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-12-19 DOI: 10.4467/16890027AP.16.019.6006
L. Beyens, A. Bobrov
Forty different sites, represented by 1483 samples, ranging from Alaska eastwards to Siberia, have been studied to assess the circumpolar testate amoebae species diversity. A total of 378 species have been recorded. The most common taxa are cosmopolitan and are widely distributed across various arctic habitats. Statistical analysis of testate amoebae species at sites across the Arctic have yielded geographic clusters of sampling sites that have been matched with climatic regions in the Arctic. We put forward the hypothesis that the differences in testate amoebae diversity across the Arctic hint to the existence of protozoological arctic regions. The problems concerning the question of the origin of the testate amoebae in the Arctic are also discussed, with emphasis on two arctic flagship species.
从阿拉斯加向东到西伯利亚的40个不同地点,1483个样本,已经被研究以评估极地周围的遗存变形虫物种多样性。共有378种被记录在案。最常见的分类群是世界性的,广泛分布在各种北极栖息地。对整个北极地区的遗存变形虫物种进行统计分析,得出了与北极气候区域相匹配的采样地点的地理集群。我们提出了北极地区遗存变形虫多样性差异提示北极原生动物区存在的假设。本文还讨论了有关北极地区遗存变形虫起源的问题,重点讨论了两个北极旗舰物种。
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引用次数: 11
Ultrastructure and Phylogeny of Pleistophora beebei sp. nov. (Microsporidia) Infecting the Amazonian Teleostean Brachyhypopomus beebei (fam. Hypopomidae) 侵染亚马逊网骨鱼的beebepleistophora sp. 11 . (Microsporidia)的超微结构和系统发育。Hypopomidae)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-12-19 DOI: 10.4467/16890027AP.16.022.6009
G. Casal, E. Matos, S. Rocha, José Ledamir Sindeaux Neto, S. Al-Quraishy, C. Azevedo
A new microsporidian, Pleistophora beebei sp. nov., parasitizing the freshwater benthopelagic teleostean fish Brachyhypopomus beebei Schultz, 1944 (fam. Hypopomidae) collected from the Amazon River is described based on molecular and morphological studies. The parasite develops in the skeletal muscle of the abdominal cavity, forming a whitish cyst-like containing several groups of two types of spores (macrospores and microspores), which were observed in close contact with the myofibrils. Small groups of macrospores (ovoid elongate, tapering more anteriorly than posteriorly and measuring about 7.8 ± 0.4 × 4.7 ± 0.2 µm) were observed among the numerous microspores (lightly pyriform to ellipsoidal with rounded ends, measured about 4.7 ± 0.3 × 2.8 ± 0.4 µm). Both types of spores possessed a single large posterior vacuole containing flocculent material. The ultrastructural aspects observed, together with the formation of a cyst-like, suggest that the parasite belongs to the genus Pleistophora. This taxonomic positioning was confirmed by the molecular analysis of the SSU rRNA gene and Maximum-likelihood (ML) inference. Comparison to similar species previously described, recognized this as a new species, herein named Pleistophora beebei sp. nov.
一种新的寄生在淡水底栖硬骨鱼上的微孢子虫,beebei Pleistophora sp. nov。根据分子和形态学的研究,对亚马逊河中收集的小虫进行了描述。寄生虫在腹腔骨骼肌中发育,形成白色的囊状,其中含有两种类型的孢子(大孢子和小孢子),它们与肌原纤维密切接触。在大量的小孢子(微梨形至椭球形,端部为圆形,约4.7±0.3 × 2.8±0.4µm)中观察到小群的大孢子(卵球形,前端锥形大于后方,尺寸约7.8±0.4 × 4.7±0.2µm)。两种类型的孢子都具有一个大的后液泡,其中含有絮状物质。观察到的超微结构以及囊状结构的形成表明该寄生虫属于Pleistophora属。SSU rRNA基因的分子分析和最大似然(ML)推断证实了这一分类定位。与前人描述的相似种比较,认定为新种,命名为Pleistophora beebei sp. nov。
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引用次数: 2
A New Soil Ciliate, Birojimia soyaensis nov. spec. (Ciliophora: Urostylida)from South Korea 韩国土壤纤毛虫一新种,Birojimia soyaensis 11 . spec.(纤毛虫目:尾虫纲)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.013.5745
Kang-San Kim, Jae‐Ho Jung, G. Min
A new soil urostylid ciliate, Birojimia soyaensis nov. spec. was discovered from Soya Island, Incheon, South Korea. The species is described based on live and stained specimen observations, and 18S ribosomal RNA gene sequence analysis. Birojimia soyaensis nov. spec. is characterized by the following features: body slender, elongate, and somewhat twisted; body size in vivo 170–200 μm × 40–50 μm; contractile vacuole located at middle of left cell margin; cortical granules present; 37–48 adoral membranelles; 3 frontal and 2 frontoterminal cirri present; III/2 and buccal cirrus present; midventral pairs only; pretransverse ventral and transverse cirri present; 1 left and 4 right marginal rows, including 3 compound rows; 5 long dorsal kineties with 3 additional shortened kineties in anteriorly compound rows; 8–11 caudal cirri; 53–69 macronuclear nodules; and 2 or 3 micronuclei. Birojimia soyaensis nov. spec. is distinguished from B. terricola by cortical granule size (0.4–1.2 μm in diameter vs. 2–3 μm × 1–2 μm), cortical granule shape (mostly spherical vs. broadly ellipsoid to lenticular, respectively); number of caudal cirri (8–11 vs. 2–7), and number of dorsal bristle rows (8 vs. 6–7). Phylogenetic analysis suggests this new species is most closely related to the genus Hemicycliostyla.
在韩国仁川黄豆岛发现了一种新的土壤尿状纲纤毛虫——Birojimia soyaensis nov.。该物种是根据活体和染色标本观察和18S核糖体RNA基因序列分析来描述的。黄斑飞虱(Birojimia soyaensis十一月种)具有以下特征:身体细长,伸长,有点扭曲;体内体尺寸170-200 μm × 40-50 μm;左侧细胞边缘中部有收缩的液泡;存在皮质颗粒;37-48口膜;有3个前缘卷和2个前缘顶卷;III/2和颊卷云存在;仅中部腹侧对;前横腹和横卷存在;左边缘行1行,右边缘行4行,其中复合行3行;5个长背体,在前面复合排中有3个额外的短背体;8-11尾卷;53 ~ 69大核结节;还有2到3个微核。大豆比罗jimia soyaensis 11 .的区别在于其皮质颗粒大小(直径为0.4 ~ 1.2 μm vs. 2 ~ 3 μm × 1 ~ 2 μm)、皮质颗粒形状(分别为球形、椭球状和透镜状);尾端刚毛的数目(8 - 11对2-7)和背刚毛的数目(8对6-7)。系统发育分析表明,该新种与半环草属亲缘关系最为密切。
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引用次数: 2
Winter abundances of naked amoebae in the soil system of the invasive species Japanese knotweed (Fallopia japonica) with comparative data from adjacent sites 入侵种日本结缕草(Fallopia japonica)土壤系统中冬季裸变形虫的丰度与邻近站点的比较
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.015.5747
P. Bischoff, Kaitlynn Connington
Among the most prolific invasive plant species posing threats to the ecological balance of ecosystems in North America and Europe is Japanese knotweed (Fallopia japonica). In order to identify the potential role of protists in the invasive capacity of Japanese knotweed the winter abundances of naked amoebae in soils from three roadside thickets of Japanese knotweed were compared to nearby non-invaded sites. Japanese knotweed soils had higher abundances (t = 5.43, df, 16, p < 0.001) of amoebae than comparison sites. This is one of the first studies to document higher abundances of soil naked amoebae associated with an invasive plant, and may indicate more generally that below-ground abundances of amoebae can promote soil fertility and support the successful adaptation and expansion of some invasive plant species. Moreover, analysis of encysted vs. trophic forms of naked amoebae in the winter soil, provided evidence of freezeresistant, amoeba resting cells in soil samples from the natural environment in support of prior findings that were based solely on laboratory experimental evidence. Overall, high densities of naked amoebae in the winter soils of Japanese knotweed, some as resting cells capable of forming rapidly activated trophic stages, likely increase soil fertility and strengthen the species’ invasive capacity.
在威胁北美和欧洲生态系统生态平衡的入侵植物中,日本结叶草(Fallopia japonica)数量最多。为了确定原生生物在结缕草入侵能力中的潜在作用,对3个结缕草路边灌丛土壤中裸变形虫的冬季丰度与附近未入侵地进行了比较。日本结叶土壤中变形虫的丰度(t = 5.43, df, 16, p < 0.001)高于对照地。这是第一次有研究证明土壤中裸露的阿米巴虫的丰度与入侵植物有关,这可能更普遍地表明,地下丰富的阿米巴虫可以促进土壤肥力,支持一些入侵植物物种的成功适应和扩张。此外,对冬季土壤中被包裹的变形虫和营养形式的裸变形虫的分析,提供了自然环境中土壤样品中具有抗冻性的变形虫静止细胞的证据,支持了先前仅基于实验室实验证据的发现。总体而言,在日本结叶植物的冬季土壤中,有大量的裸变形虫,其中一些是能够形成快速激活营养阶段的休眠细胞,可能增加了土壤肥力,增强了物种的入侵能力。
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引用次数: 6
Microbial respiration of organic carbon in freshwater microcosms: the potential for improved estimation of microbial CO2 emission from organically enriched freshwater ecosystems 淡水微生态系统中有机碳的微生物呼吸作用:从富含有机的淡水生态系统中改进微生物二氧化碳排放估算的潜力
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.018.5750
O. Anderson
Microbial respiration of organic carbon in freshwater microcosms: The potential for improved estimation of microbial CO2 emission from organically enriched freshwater ecosystems
淡水微生态系统中有机碳的微生物呼吸作用:有机富集淡水生态系统中微生物二氧化碳排放估算的改进潜力
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引用次数: 2
Interaction of ciliate communities with cyanobacterial water bloom in a shallow, hypertrophic reservoir 在一个浅的、肥厚的水库中,纤毛虫群落与蓝藻水华的相互作用
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.017.5749
E. Tirjaková, K. Krajčovičová, M. Illyová, P. Vďačný
The response of ciliate communities to cyanobacterial bloom was investigated in a shallow, hypertrophic reservoir in Slovakia, central Europe. Seasonal dynamics of ciliate communities corresponded negatively with course of water bloom formation. The highest numbers and abundances of ciliate species occurred during the spring season when cyanobacterial bloom was not fully developed, while there was an abrupt decrease in both numbers and abundances at the beginning of summer when water bloom culminated. Cyanobacterial blooming thus significantly lowered diversity and equitability of ciliate communities: many rare and sporadic species disappeared and few common taxa flourished and dominated. Nonetheless, these leading ciliates formed a functionally diverse assemblage whose members showed mostly positive contemporaneous and only rarely time-shifted interactions. There were fine filter feeders (Cinetochilum margaritaceum, Dexiotricha granulosa, Paramecium caudatum and Spirostomum teres) grazing heterotrophic bacteria and picocyanobacteria, omnivorous fine to coarse filter feeders (Frontonia leucas) as well as hunters (Coleps hirtus, Holophrya teres and Loxophyllum helus) looking for an individual prey. Also a comparatively rich, anaerobic coenosis comprising various bacterivorous armophoreans and plagiopyleans, developed at the bottom of the reservoir. Our study documents that ciliates form functionally diverse communities with potential to control cyanobacterial blooms in hypertrophic reservoirs.
在中欧斯洛伐克的一个浅层肥厚水库中,研究了纤毛虫群落对蓝藻华的反应。纤毛虫群落的季节动态与水华形成过程呈负相关。在蓝藻水华尚未完全发育的春季,纤毛虫的数量和丰度最高,而在夏初水华达到顶峰时,纤毛虫的数量和丰度都急剧下降。因此,蓝藻开花显著降低了纤毛虫群落的多样性和公平性:许多稀有和零星物种消失,少数常见分类群蓬勃发展和占主导地位。尽管如此,这些领先的纤毛虫形成了一个功能多样化的组合,其成员大多表现出积极的同时期相互作用,只有很少的时移相互作用。有细滤食性(Cinetochilum margaritacum、Dexiotricha granulosa、尾草草皮虫和Spirostomum teres)放牧异养细菌和picocyanobacteria,杂食性细至粗滤食性(Frontonia leucas)以及寻找单个猎物的猎人(Coleps hirtus、Holophrya teres和Loxophyllum helus)。此外,在储层底部发育了一个相对丰富的厌氧群落,包括各种细菌甲虫和斜鳃虫。我们的研究文件表明,纤毛虫形成功能多样的群落,具有控制肥厚水库蓝藻华的潜力。
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引用次数: 13
A New Amoeba with Protosteloid Fruiting: Luapeleamoeba hula n. g. n. sp. (Acanthamoebidae, Centramoebida, Amoebozoa) 一种具有原柱状果的变形虫新种:Luapeleamoeba hula n. g. n. sp.(棘阿米巴亚目,中阿米巴亚目,阿米巴亚目)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.012.5744
Lora L. Shadwick, Matthew W. Brown, Alexander K Tice, F. Spiegel
We describe a new protosteloid amoeba, Luapeleamoeba hula. Protosteloid amoebae, sometimes called protostelids, are sporocarpic amoebae that make fruiting bodies that consist of a stalk and one to a few spores. This new taxon was cultured from dead leaves of mamaki (Pipturus albidus) from the Manuka Natural Area Reserve, Hawaii, USA. Light microscopic examination showed that this amoeba has a short, rigid stalk with a small apophysis and a spore that changes shape continuously until it is shed and crawls away from the stalk. In addition, this amoeba was initially observed to maintain a diurnal rhythm in which fruiting body formation occurred primarily in the late afternoon. This new species is unique in both its amoebal and fruiting body morphology. Spore deciduousness appears to be a result of shape changes in the spore itself. This is the fourth species of protosteloid amoeba described with a clearly described diurnal rhythm. In addition, previous molecular phylogenetic analyses suggested that this new species has SSU rRNA gene sequences that clearly separate it from any other protosteloid amoebae and place it as sister to Protacanthamoeba bohemica among the Acanthamoebidae family in Centramoebida of Amoebozoa. Because this new amoeba species does not fit into any of the centramoebid genera, we have proposed a new genus Luapeleamoeba.
我们描述了一种新的原柱状阿米巴,Luapeleamoeba hula。原柱变形虫,有时被称为原柱变形虫,是孢子囊变形虫,其子实体由一根茎和一到几个孢子组成。这个新分类群是从美国夏威夷麦卢卡自然保护区的mamaki (Pipturus albidus)的枯叶中培养出来的。光镜检查显示,该变形虫具有短而坚硬的茎,茎突小,孢子不断改变形状,直到脱落并从茎上爬出。此外,这种变形虫最初被观察到保持昼夜节律,其中子实体形成主要发生在下午晚些时候。这个新种在变形虫和子实体形态上都是独特的。孢子的落叶性似乎是孢子本身形状变化的结果。这是第四种具有清晰描述的昼夜节律的原柱状变形虫。此外,先前的分子系统发育分析表明,该新种具有SSU rRNA基因序列,可以将其与任何其他原柱状阿米巴原虫区分开来,并将其作为阿米巴原虫中阿米巴原虫科棘阿米巴波希米亚原虫的姐妹。由于这个新的阿米巴物种不属于任何中阿米巴属,我们提出了一个新的属Luapeleamoeba。
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引用次数: 8
Trichodina diaptomi (Ciliophora: Peritrichia) from Two Calanoid Copepods from Botswana and South Africa, with Notes on its Life History 来自博茨瓦纳和南非的两种鱿鱼类桡足类的diaptomi(纤毛虫目:糙毛虫目)及其生活史的注释
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.016.5748
D. West, L. Basson, J. As
Members of the genus Trichodina are mostly found on fish, but have also been recorded from a variety of other aquatic organisms, including calanoid copepods. So far, it appears that all the trichodinid populations collected from calanoids in various parts of the world are the same species, i.e. Trichodina diaptomi Sramek-Husek, 1953. This paper reports on a new record of T. diaptomi from Metadiaptomus meridianus in a large reservoir in South Africa, as well as on a new host species, Metadiaptomus transvaalensis, and the first record of T. diaptomi from pools in an ephemeral river in northern Botswana, therefore adding a new country to the distribution of this species. We used the history of the discovery of T. diaptomi in different parts of the world and came to the conclusion that it is a cosmopolitan species, exclusively associated with copepods of the order Calanoida. Based on existing information, T. diaptomi does not appear to have a reservoir host. Against this background, we provide a discussion on the possibility that, although no dormant stage has been recorded for any trichodinid, it may be possible that T. diaptomi possesses some form of diapause and that this might be related to that of calanoid copepods.
Trichodina属的成员主要在鱼类中发现,但也从其他各种水生生物中记录下来,包括calanoid桡足类动物。迄今为止,从世界各地的calanoid中收集到的trichodinadiaptomi (Sramek-Husek, 1953)似乎都是同一种。本文报道了在南非大型水库中发现的Metadiaptomus meridianus diaptomi的新记录,以及一个新的寄主种Metadiaptomus transvaalensis,以及在博茨瓦纳北部一条短暂河流的水池中发现的第一个diaptomi记录,从而为该物种的分布增加了一个新的国家。我们利用在世界不同地区发现T. diaptomi的历史,得出结论,它是一个世界性的物种,专门与Calanoida目的桡足类动物有关。根据现有资料,diaptomi似乎没有宿主。在此背景下,我们讨论了一种可能性,即尽管没有任何trichodinids的休眠阶段记录,但T. diaptomi可能具有某种形式的滞育,并且这可能与calanoid桡足类动物的滞育有关。
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引用次数: 9
Chlorophyll-a and Suspended Inorganic Material Affecting the Shell Traitsof Testate Amoebae Community 叶绿素-a和悬浮无机物对无卵变形虫群落壳性状的影响
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-11-28 DOI: 10.4467/16890027AP.16.014.5746
L. Schwind, R. L. Arrieira, C. Bonecker, F. Lansac-Tôha
Shell composition is considered an important functional trait in testate amoebae community. Differences in the composition of shells may represent adaptations of these organisms to changes in the availability of environmental resources. We aimed to evaluate the influence of these environmental resources on the presence of different testate amoeba species, based on observation of one important functional trait (shell composition), in floodplain environments. We hypothesised that species diversity would increase with increased availability of food (chlorophyll-a; a critical environmental requirement). We also predicted that a higher concentration of suspended inorganic material would contribute to the occurrence of species that have an exogenous shell. Testate amoeba samples were taken between 2002 and 2011 in plankton of ten floodplain environments. A significant positive correlation was noted between the concentration of chlorophyll-a and the diversity of testate amoeba species according to a simple regression analysis. Furthermore, non-metric multidimensional scaling showed distinct groups with lower and higher concentration of suspended inorganic material. The occurrence of testate amoeba species with smaller exogenous shells was the most influenced by environments with higher concentrations of suspended inorganic material. Thus, our results emphasised that the evaluated environmental resources are important as assembly factors to shell traits in testate amoebae community.
壳组成被认为是遗存变形虫群落的重要功能性状。贝壳组成的差异可能代表了这些生物对环境资源可用性变化的适应。我们的目的是在观察河漫滩环境中一个重要的功能特征(壳组成)的基础上,评估这些环境资源对不同遗存变形虫物种存在的影响。我们假设物种多样性会随着食物供应的增加而增加(叶绿素-a;一个关键的环境要求)。我们还预测,较高浓度的悬浮无机物将有助于有外源壳的物种的发生。2002年至2011年间,在10个洪泛区环境的浮游生物中采集了遗骨变形虫样本。通过简单的回归分析,叶绿素A浓度与雄性变形虫物种多样性呈显著正相关。在非度量多维尺度尺度上,随悬浮物浓度的高低而呈现出明显的基团。外源壳较小的睾丸阿米巴原虫的发生受高浓度悬浮物的影响最大。因此,我们的研究结果强调了所评价的环境资源是影响遗属变形虫群落外壳性状的重要组装因子。
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引用次数: 8
A new species of Flamella (Amoebozoa, Variosea, Gracilipodida) isolated from a freshwater pool in Southern Mississippi, USA 美国密西西比南部淡水池中分离的一新种(变形虫,变形虫科,细足科)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2016-09-22 DOI: 10.4467/16890027AP.16.010.4945
Austin C. Walthall, Alexander K Tice, Matthew W. Brown
We isolated and identified a freshwater amoebozoan species that belongs to the genus Flamella Schaeffer, 1926 by single cell isolation and light microscopy. Our specific strain was isolated from a water sample obtained on the cover of a swimming pool in Petal, Mississippi, USA collected during the winter of 2015. Morphologically, our isolate is a fan-shaped amoeba with a large, frontal hyaloplasm and distinctive granuloplasm. It is capable of encystment and trophozoites occasionally have two nuclei. The isolate (GFP151sc) is phylogenetically sister to but unique from the freshwater environmental flamellid clone from Borok, Yaroslavl region, Russia originally published in 2006. Here we describe and place this isolate into a new species, Flamella piscinae n. sp.
我们通过单细胞分离和光学显微镜分离鉴定了一个淡水阿米巴原虫属Flamella Schaeffer, 1926。我们的特定菌株是从2015年冬季收集的美国密西西比州Petal市游泳池盖上的水样中分离出来的。在形态学上,我们的分离物是一个扇形的变形虫,有一个大的,正面的透明质和独特的颗粒质。它能成囊,滋养体偶尔有两个细胞核。该分离物(GFP151sc)在系统发育上与2006年首次发表的俄罗斯雅罗斯拉夫地区Borok的淡水环境火蛉克隆相似,但具有独特性。在这里,我们描述并把这个分离到一个新的物种,Flamella piscinae n. sp。
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引用次数: 5
期刊
Acta Protozoologica
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