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Morphological and Molecular Identification of Isospora sepetibensis (Chromista: Miozoa: Eimeriidae) from a New Host, Trichothraupis melanops (Passeriformes: Thraupidae: Tachyphoninae) in South America 南美新寄主黑斑毛蚤的形态与分子鉴定(毛虫目:绵虫目:艾虫科)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-07-25 DOI: 10.4467/16890027ap.19.007.10838
Jhon Lennon Genovez-Oliveira, S. Cardozo, Á. Oliveira, Viviane M. Lima, Ildemar Ferreira, B. P. Berto
Isospora sepetibensisBerto, Flausino, Luz, Ferreira and Lopes, 2008 is a protozoan coccidian parasite (Chromista: Miozoa: Coccidiomorphea: Coccidia) that was originally described from Brazilian tanagers Ramphocelus bresilius (Linnaeus, 1766) in the Marambaia Island in the Coast of the State of Rio de Janeiro. In the current work, this species was identified from black-goggled tanagers Trichothraupis melanops (Vieillot, 1818) in the Itatiaia National Park, which is a protected area with a high degree of vulnerability in the interior of the State of Rio de Janeiro, distant in more than 100 km of the type- locality. Its oocysts are sub-spherical to elongate ovoidal, 25.9 ´20.7 µm with smooth, bi-layered wall, ~ 1.3 µm and length/width ratio of 1.1–1.4 (1.26). Micropyle and oocyst residuum absent, but one or two polar granules are present. Sporocysts are ellipsoidal, 16.8 ´10.3 µm, with both Stieda and sub-Stieda bodies. Sporocyst residuum present and sporozoites with refractile body and nucleus. Molecular analysis was conducted at the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene. This new isolate exhibited similarity greater than 98% with Isospora spp. isolates from other Neotropical passerines and with an Isospora sp. pseudoparasite of voles of Eurasia. This is the first coccidian parasite from a New World tanager to have a molecular identification of the cox1 gene.
sepetibensisBerto,Flausino,Luz,Ferreira和Lopes,2008是一种原生动物-球虫寄生虫(Chromista:Miozoa:Coccidiomorpea:Coccidia),最初描述于里约热内卢州海岸Marambaia岛的巴西tanagers Ramphocelus bresilius(Linnaeus,1766)。在目前的工作中,该物种是从伊塔蒂亚亚国家公园的黑眼镜tanagers Trichothraupis melanops(Vieillot,1818)中鉴定出来的,该公园是里约热内卢州内陆的一个高度脆弱的保护区,距离该类型地区100多公里。卵囊为亚球形至细长卵球形,25.9´20.7µm,壁光滑,约1.3µm,长宽比为1.1–1.4(1.26)。没有微孔和卵囊残留物,但存在一个或两个极性颗粒。孢子囊是椭圆形的,16.8´10.3µm,同时具有Stieda和次Stieda体。存在的孢子囊残体和具有折射体和核的子孢子。对线粒体细胞色素c氧化酶亚基1(cox1)基因进行分子分析。该新分离物与异孢菌属(Isospora sp.)的相似性大于98%。来自其他新热带雀形目的分离物和欧亚大陆田鼠的一种异孢菌(Isosporia sp.)假寄生虫。这是第一个从新世界采集的球虫寄生虫具有cox1基因的分子鉴定。
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引用次数: 2
Novel Media for Lipid Production of Chlorococcum oleofaciens : A RSM Approach 油面绿球藻脂质产生的新介质:RSM法
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-07-25 DOI: 10.4467/16890027ap.19.003.10834
J. Pauline, A. Achary
The algal medium was optimized to increase the biomass and lipid production of Chlorococcum oleofaciens. The significant variables were screened and chosen from previously reported algal culture media using Plackett Burman Design (PBD). Optimization of the significant variables were performed using central composite design. The Pareto chart for PBD revealed that the salts such as sodium bicarbonate, sodium nitrate, potassium nitrate and ferrous sulphate had enhanced the biomass and lipid production. The variables and its effect on the responses were further studied by central composite design (CCD). A new medium was formulated based on the response surface methodology. The predicted concentration of NaHCO3, NaNO3, KNO3, MgSO4.7H2O were found to be 6.75 g/L, 0.75 g/L, 1.88 g/L and 0.35 g/L respectively. The actual and the predicted total lipid yield for the optimized media was around 0.74 g/L and 0.78 g/L respectively. The optimal medium has been named as AM medium. Growth and the lipid yields of C. oleofaciens were found higher in AM medium. The specific growth rates of C. oleofaciens in AM and CFTRI media were found to be 0.14 day-1 and 0.19 day-1 respectively. The biomass produced by the optimized AM medium was found to be 2.7 times greater compared to the CFTRI medium. The lipid was extracted and GC-MS was performed which revealed that the fatty acids were predominantly of the class C15:0, C18:0, C16:0 and C12:0. It is concluded that besides lipid content, AM medium increased the cell number leading to the increase in biomass.
对藻类培养基进行了优化,以提高油面绿球藻的生物量和脂质产量。使用Plackett-Burman设计(PBD)从先前报道的藻类培养基中筛选并选择重要变量。使用中心复合设计对重要变量进行优化。多溴联苯醚的Pareto图显示,碳酸氢钠、硝酸钠、硝酸钾和硫酸亚铁等盐提高了生物量和脂质产量。通过中心复合设计(CCD)进一步研究了这些变量及其对响应的影响。基于响应面法配制了一种新的培养基。NaHCO3、NaNO3、KNO3、MgSO4.7H2O的预测浓度分别为6.75g/L、0.75g/L、1.88g/L和0.35g/L。优化培养基的实际和预测总脂质产量分别约为0.74g/L和0.78g/L。最佳培养基命名为AM培养基。油面梭菌在AM培养基中的生长和脂质产量较高。油面梭菌在AM和CFTRI培养基中的比生长速率分别为0.14天-1和0.19天-1。发现优化的AM培养基产生的生物量是CFTRI培养基的2.7倍。提取脂质并进行GC-MS,其显示脂肪酸主要为C15:0、C18:0、C16:0和C12:0类。结果表明,AM培养基除了增加脂质含量外,还增加了细胞数量,导致生物量增加。
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引用次数: 3
Morphological and Molecular Characteristics of Kudoa viseuensis n. sp. (Myxosporea: Multivalvulida), Found in the Muscle of Batrachoides surinamensis (Teleostei: Batrachoididae) in the Brazilian Amazon Region 巴西亚马孙地区苏里南Batrachoides surinamensis (Teleostei: Batrachoididae)肌肉中发现的Kudoa viseuensis n. sp.(粘孢子目:多瓣孢子目)的形态和分子特征
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-07-25 DOI: 10.4467/16890027ap.19.002.10833
Elideth Pacheco Monteiro, D. Silva, O. Sanches, I. Hamoy, E. Matos
A new species of myxozoan, Kudoa viseuensis n. sp. (Myxosporea: Multivalvulida), is described based on specimens extracted from the musculature of the Pacuma toadfish, Batrachoides surinamensis, collected in the municipality of Viseu, in the northern Brazilian state of Para. A total of 60 specimens of B. surinamensis were examined, of which 52 (86%) presented whitish pseudocysts containing numerous rounded spores (7.2±0.2 μm in length and 5.2±0.2 μm in width). These spores have four polar capsules of equal size, measuring 1.8±0.2 μm x 1.3±0.1 μm in the apical view, and 2.7±0.2 μm x 1.3±0.1 μm in the lateral view. A partial sequence (1400 bps) of the small subunit ribosomal RNA gene was obtained and deposited in GenBank (access number: MK256272). The comparison of the morphological and molecular data with those of other Kudoa species supported the description of a new species of mixosporean from the Amazon region, which is denominated here as Kudoa viseuensis n. sp.
根据巴西北部帕拉州维塞乌市采集的Pacuma蟾蜍鱼Batrachoides surinamensis肌肉组织标本,描述了一种新的黏液动物Kudoa viseuensis n. sp.(黏液孢子目:多阀目)。对60份苏里南芽孢杆菌标本进行了检测,其中52份(86%)呈白色假囊,假囊内含有大量圆形孢子(长7.2±0.2 μm,宽5.2±0.2 μm)。孢子有4个极性蒴果,大小相等,顶端为1.8±0.2 μm × 1.3±0.1 μm,侧面为2.7±0.2 μm × 1.3±0.1 μm。获得小亚基核糖体RNA基因的部分序列(1400 bps),并存入GenBank(访问号:MK256272)。与其他库多亚种的形态和分子资料的比较支持了亚马逊地区混合孢子虫新种的描述,这里命名为Kudoa viseuensis n. sp。
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引用次数: 4
Morphology and Molecular Analyses of a New Marine Ciliate, Arcuseries minima sp. nov. (Ciliophora: Urostylidae) 一种新的海洋纤毛虫Arcuseries minima sp.nov.的形态和分子分析(Ciliophora:Urostylidae)
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-07-25 DOI: 10.4467/16890027ap.19.005.10836
Kang-San Kim, KYU-SEOK Chae, G. Min
A new marine urostylid ciliate, Arcuseries minima sp. nov., was discovered in South Korea. Morphological observations and molecular phylogenetic analyses based on small subunit ribosomal DNA (18S rDNA) sequences were used to describe the new species. Arcuseries minima is most similar to A. scutellum among all Arcuseries species, but differs in the following main characters: number of adoral membranelles (13–16 vs. 17 or 18), cortical granules (yellowish, clustered around cirri and dorsal bristles vs. colorless, irregularly scattered), number of macronuclear nodules (20–27 vs. 42–90), number of midventral cirri (5–10 vs. 12–14), and number f transverse cirri (5 or 6 vs. 8). The new species and A. scutellum differ from A. petzi and A. warreni in having smaller body size (≤80 μm vs. ≥80 μm) and fewer cirri: left marginal (≤ 17 vs. ≥ 18) and transverse (≤ 8 vs. ≥8) cirri. This relationship was supported by the phylogenetic tree, where these two groups were separated into two branches.
在韩国发现了一种新的海洋柱状纤毛虫Arcuseries minima sp.nov。基于小亚基核糖体DNA(18S rDNA)序列的形态学观察和分子系统发育分析用于描述新物种。在所有Arcuseries物种中,Arcuseries minima与A.scutellum最相似,但在以下主要特征上有所不同:崇拜膜的数量(13-16 vs.17或18)、皮层颗粒(黄色,聚集在卷毛和背刚毛周围vs.无色,不规则分散)、大核结节的数量(20-27 vs.42-90)、中腹卷毛的数量(5-10 vs.12-14),和数目f横向cirri(5或6对8)。新种和盾叶A.scutellum与A.petzi和A.warreni的不同之处在于,它们的体型较小(≤80μm vs.≥80μm),卷须较少:左缘卷须(≤17 vs.≥18)和横向卷须(≥8 vs.≥8)。这种关系得到了系统发育树的支持,将这两个群体分为两个分支。
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引用次数: 4
First Molecular Detection of Giardia duodenalis Assemblage B in a Free-Living European Wildcat (Felis s. silvestris) from Luxembourg 卢森堡一只自由生活的欧洲野猫(Felis s.silvestris)十二指肠贾第鞭毛虫组合B的首次分子检测
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-07-25 DOI: 10.4467/16890027ap.19.001.10832
Piotr Solarczyk, N. Osten-Sacken, A. Frantz, Simone Schneider, Jacques B. Pir, M. Heddergott
Giardia duodenalisis one of the most widespread intestinal parasites of humans and other vertebrates. In terms of public health, identification of Giardia assemblages in wildlife is important because only some assemblages of G. duodenalis can infect humans. Here, we use loop-mediated isothermal amplification (LAMP) and genotyping of analysis of the β-giardin geneto screen the zoonotic assemblages of G. duodenalis recovered from faeces of free-living European wildcats (Felis s. silvestris) from Luxembourg. Giardia DNA was detected in one animal (10%) and assigned to assemblage B by both methods. This is the first detection and genotyping of G. duodenalis in a European wild felid in general, and of assemblage B in particular. Free-living wildcats may act as reservoirs of G. duodenalis infectious for humans and other wildlife and domestic animals. Using a combination of LAMP- and genotyping-based methods allowed effective, sensitive, and rapid detection of a zoonotic G. duodenalis assemblage B in wildlife.
十二指肠贾第虫人类和其他脊椎动物最广泛的肠道寄生虫之一。在公共卫生方面,野生动物贾第鞭毛虫的鉴定是重要的,因为只有一些贾第鞭毛虫组合可以感染人类。本研究采用环介导的等温扩增(LAMP)和β-贾丁素基因分型分析方法,筛选了从卢森堡自由生活的欧洲野猫(Felis s. silvestris)粪便中提取的十二指肠G.的人畜共患组合。在一只动物(10%)中检测到贾第鞭毛虫DNA,并通过两种方法将其归属于组合B。这是首次在欧洲野生野地,特别是B组合野地检测到十二指肠螺杆菌并进行基因分型。自由生活的野猫可能是十二指肠梭菌的宿主,对人类和其他野生动物和家畜具有传染性。结合LAMP和基于基因分型的方法,可以有效、灵敏、快速地检测野生动物中人畜共患的十二指肠螺旋体组合B。
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引用次数: 2
Ultrastructural Studies on a Model Tintinnid - Schmidingerella meunieri (Kofoid and Campbell, 1929) Agatha and Strüder-Kypke, 2012 (Ciliophora). I. Somatic Kinetids with Unique Ultrastructure. 对模型纤毛虫 Schmidingerella meunieri (Kofoid and Campbell, 1929) 的超微结构研究 Agatha and Strüder-Kypke, 2012(纤毛虫)。I. 具有独特超微结构的体细胞 Kinetids。
IF 1.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-05-24 Epub Date: 2019-01-11 DOI: 10.4467/16890027AP.18.015.10091
Michael S Gruber, Alexandra Mühlthaler, Sabine Agatha

Molecular phylogenies of Oligotrichea currently do not contain all genera and families and display topologies which are often incongruent with morphological findings. In ciliates, the somatic kinetids are rather conserved, i.e., their ultrastructures, particularly the fibrillar associates, often characterise the main groups, except for the choreotrichids. Four different kinetid types are found in protargol-stained choreotrichids and used for reconstructing the taxon's evolution (the "Kinetid Transformation Hypothesis"). Proof for this hypothesis requires transmission electron microscopic studies, which are very rare in the choreotrichids and oligotrichids. Such an approach provides insights into the ultrastructural variability of somatic kinetids in spirotrichs and may also detect apomorphies characterising certain choreotrichid families. In the model tintinnid Schmidingerella meunieri, the ultrastructure of the three kinetid types in the somatic ciliature is studied in cryofixed cells. The data support the "Kinetid Transformation Hypothesis" regarding tintinnids with a ventral kinety. This first detailed study on kinetids in tintinnids and choreotrichids in general reveals totally new kinetid types in ciliates: beyond the three common associates, they are characterised by two or three conspicuous microtubular ribbons extending on the kinetids' left sides. These extraordinary ribbons form together with the overlapping postciliary ribbons a unique network in the cortex of the anterior cell portion. The evolutionary constrains which might have fostered the development of such structures are discussed for the Oligotrichea, the choreotrichids, and tintinnids as their first occurrence is currently uncertain. Additionally, the kinetids in tintinnids, aloricate choreotrichids, oligotrichids, hypotrichs, and euplotids are compared.

目前,Oligotrichea 的分子系统发育并不包含所有的属和科,其拓扑结构往往与形态学研究结果不一致。在纤毛虫中,体细胞内的kinetid是相当保守的,即它们的超微结构,尤其是纤维状的结合体,通常是主要类群的特征,但纤毛虫类除外。在原胶染色的蝶形目中发现了四种不同的蝶形花类型,可用于重建该类群的进化过程("蝶形花转化假说")。证明这一假说需要进行透射电子显微镜研究,而这种研究在蝶形目和寡蝶形目中非常罕见。通过这种方法可以深入了解螺旋体中体细胞动核的超微结构变异性,还可以发现某些蝶形目家族的特征。在模式丁宁虫 Schmidingerella meunieri 中,研究人员在低温固定细胞中研究了体细胞纤毛器中三种纤毛器的超微结构。这些数据支持了关于具有腹侧纤毛器的丁丁虫的 "纤毛器转化假说"。这是首次对纤毛虫中的腹动子(kinetid)进行详细研究,揭示了纤毛虫中全新的腹动子类型:除了三种常见的联系外,它们还具有在腹动子左侧延伸的两条或三条明显的微管带。这些特殊的带子与重叠的后纤毛带一起,在前细胞部分的皮层中形成了一个独特的网络。由于这些结构的首次出现目前尚不确定,因此我们将讨论可能促进这些结构发展的进化限制因素,包括寡毛类、蝶形类和蝶形类。此外,还比较了tintinnids、aloricate choreotrichids、oligotrichids、hypotrichs和 euplotids中的kinetids。
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引用次数: 0
Redescription of Dexiotricha colpidiopsis (Kahl, 1926) Jankowski, 1964 (Ciliophora, Oligohymenophorea) from a Hot Spring in Iceland with Identification Key for Dexiotricha species. 冰岛温泉Dexiotricha colpidopsis (Kahl, 1926) Jankowski, 1964 (Ciliophora, oligo膜翅目)的再描述与Dexiotricha物种识别密钥。
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-05-24 Epub Date: 2018-12-14 DOI: 10.4467/16890027AP.18.009.8983
Zhishuai Qu, René Groben, Viggó Marteinsson, Sabine Agatha, Sabine Filker, Thorsten Stoeck

We isolated an encysted ciliate from a geothermal field in Iceland. The morphological features of this isolate fit the descriptions of Dexiotricha colpidiopsis Kahl, 1926) Jankowski, 1964 very well. These comprise body shape and size in vivo, the number of somatic kineties, and the positions of macronucleus and contractile vacuole. Using state-of-the-art taxonomic methods, the species is redescribed, including phylogenetic analyses of the small subunit ribosomal RNA (SSU rRNA) gene as molecular marker. In the phylogenetic analyses, D. colpidiopsis clusters with the three available SSU rRNA gene sequences of congeners, suggesting a monophyly of the genus Dexiotricha. Its closest relative in phylogenetic analyses is D. elliptica, which also shows a high morphological similarity. This is the first record of a Dexiotricha species from a hot spring, indicating a wide temperature tolerance of this species at least in the encysted state. The new findings on D. colpidiopsis are included in a briefly revision of the scuticociliate genus Dexiotricha and an identification key to the species.

我们从冰岛的地热田中分离出了一只囊状纤毛虫。该分离物的形态特征与Dexiotricha colpidiopsis Kahl (1926) Jankowski(1964)的描述非常吻合。这些包括在体内的体型和大小,体细胞运动的数量,以及大核和收缩液泡的位置。使用最先进的分类学方法,物种被重新描述,包括小亚单位核糖体RNA (SSU rRNA)基因作为分子标记的系统发育分析。在系统发育分析中,D. colpidiopsis与三个可用的SSU rRNA基因序列同源,提示Dexiotricha属单系。在系统发育分析中,其最近的亲缘关系是D. elliptica,也显示出很高的形态相似性。这是首次在温泉中发现的Dexiotricha物种,表明该物种至少在成囊状态下具有广泛的耐温性。关于d.c olpidopsis的新发现包括在一个简要修订的壳虫属Dexiotricha和鉴定关键的物种。
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引用次数: 7
Some Ultrastructural Features of the Planktonic Freshwater Ciliate Limnostrombidium viride (Alveolata, Ciliophora, Oligotrichida) and Improved Diagnoses of Oligotrich Taxa. 浮游淡水纤毛虫Limnostrombidium viride(Alveolata,Ciliophora,Oligtrichida)的一些超微结构特征和对Oligtrich Taxa的改进诊断。
IF 1.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-05-24 Epub Date: 2019-01-11 DOI: 10.4467/16890027AP.18.014.10090
Christian F Bardele, Nicole Stockmann, Sabine Agatha

The first transmission and scanning electron microscopical studies in combination with freeze-fracture technology have disclosed some important morphological and ultrastructural features in the freshwater oligotrichid Limnostrombidium viride. (I) The dikinetids (paired basal bodies) of the girdle kinety have a club-shaped cilium associated only with each left basal body. The electron-dense (paraflagellar) body on one side of its "9×2+2"-axoneme and the regular array of intramembranous particles indicate a sensory, perhaps photoreceptor function of these club-shaped cilia. (II) The stichomonad endoral membrane is proximally covered by a cytoplasmic fold and distally by multiple membranous layers. Thus entirely covered, the endoral is probably no longer involved in food capture; nonetheless, its associated microtubules might stabilise the cytopharynx. (III) Instead of a contractile vacuole, a horizontal ring-canal with supposed osmoregulatory function occurs. (IV) The extrusive nature of the trichites is not only observed in electron micrographs, but the attachment sites of these organelles also display a rosette of "8+1"-particles in the P-face of freeze-fracture replicas typical for ciliate extrusomes. (V) The neoformation organelle, the subsurface tube in which stomatogenesis takes place, shows short basal bodies and normal axonemes about 1 μm long. It is accompanied by numerous membrane vesicles, which might provide membrane material for the outgrowing cilia.

首次透射和扫描电子显微镜研究结合冷冻断裂技术揭示了淡水寡毛蓝藻的一些重要形态和超微结构特征。(I) 带动力的二动力(成对的基体)具有仅与每个左基体相关的棒状纤毛。“9×2+2”轴丝一侧的电子致密(链旁)体和膜内颗粒的规则排列表明这些棒状纤毛具有感觉功能,可能是感光功能。(II) 黏单胞菌内膜近端被细胞质折叠覆盖,远端被多个膜层覆盖。因此完全被覆盖,内脏可能不再参与食物捕获;尽管如此,其相关的微管可能会稳定细胞浆。(III) 出现了一个具有渗透调节功能的水平环形管,而不是一个可收缩的液泡。(IV) 毛的挤出性质不仅在电子显微照片中观察到,而且这些细胞器的附着位点在纤毛挤出体典型的冷冻断裂复制品的P面上也显示出“8+1”颗粒的玫瑰花结。(V) 新生细胞器,即发生气孔形成的亚表层管,显示出约1μm长的短基体和正常轴突。它伴有许多膜小泡,这些小泡可能为生长的纤毛提供膜材料。
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引用次数: 0
Centrohelid Heliozoans (Centroplasthelida Febvre-Chevalier et Febvre, 1984) from Different Types of Freshwater Bodies in the Middle Russian Forest-steppe 来自俄罗斯中部森林草原不同类型淡水水体的Centroplasthelida Febvre- chevalier et Febvre, 1984
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-02-12 DOI: 10.4467/16890027AP.18.018.10094
K. Prokina, Dmitry G. Zagumyonnyi, D. Tikhonenkov
Centrohelid Heliozoans (Centroplasthelida Febvre-Chevalier et Febvre, 1984) from Different Types of Freshwater Bodies in the Middle Russian Forest-steppe
俄罗斯中部森林不同类型淡水水体的太阳神中心(Centrophilida Febvre-Chevalier et Febvre,1984)
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引用次数: 8
Testate Amoebae from South Vietnam Waterbodies with the Description of New Species Difflugia vietnamica sp. nov. 来自南越水体的试验性变形虫及其新种Difflugia vietnamica sp.nov.的描述。
IF 0.5 4区 生物学 Q4 MICROBIOLOGY Pub Date : 2019-02-12 DOI: 10.4467/16890027AP.18.016.10092
Hoan Q. Trana, Y. Mazei
Testate Amoebae from South Vietnam Waterbodies with the Description of New Species Difflugia vietnamica sp. nov.
来自南越水体的试验性变形虫及其新种Difflugia vietnamica sp.nov.的描述。
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引用次数: 7
期刊
Acta Protozoologica
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