Our series of interviews with leading karstologists now turns to cave biologist. David Culver, an emeritus professor of environmental science at the American University (Washington DC, USA), talks about his relationship to karst and what subterranean biology has given to the geoscientific disciplines and what it has taken from them. His science approach is well reflected in the statement: “In the last few decades, I have done valuable little completely independent research, and collaboration with people with different skill groups has been critical”.
{"title":"For most of its history, biospeleology has been a poor cousin of the other speleological disciplines","authors":"Ivo Lučić","doi":"10.3986/ac.v49i2-3.9391","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.9391","url":null,"abstract":"Our series of interviews with leading karstologists now turns to cave biologist. David Culver, an emeritus professor of environmental science at the American University (Washington DC, USA), talks about his relationship to karst and what subterranean biology has given to the geoscientific disciplines and what it has taken from them. His science approach is well reflected in the statement: “In the last few decades, I have done valuable little completely independent research, and collaboration with people with different skill groups has been critical”.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44408574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Only few cave photography books chave reached a wide international recognition. The best example is the book on Lechugilla Cave, published by Speleo Projects in 1991. The book has been an inspiration to many cave photographers. Incredible photos from the »most beautifull cave in the world« were shot by two teams, led by Urs Widmer Kevin Downey and Sure Ballman. The book also inspired Max Wisshak, one of the most recognised cave photographers, who dedicated his second book to the late photographer and publisher Urs Widmer.
只有少数几本洞穴摄影书籍获得了广泛的国际认可。最好的例子是Speleo Projects于1991年出版的关于Lechugilla洞穴的书。这本书启发了许多洞穴摄影师。来自“世界上最美丽的洞穴”的令人难以置信的照片是由Urs Widmer Kevin Downey和Sure Ballman带领的两个团队拍摄的。这本书也启发了最受认可的洞穴摄影师之一Max Wisshak，他将自己的第二本书献给了已故摄影师兼出版商Urs Widmer。
{"title":"A voyage across limestone landscapes into the subterranean realm of caves","authors":"Peter Gedei","doi":"10.3986/ac.v49i2-3.9395","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.9395","url":null,"abstract":"Only few cave photography books chave reached a wide international recognition. The best example is the book on Lechugilla Cave, published by Speleo Projects in 1991. The book has been an inspiration to many cave photographers. Incredible photos from the »most beautifull cave in the world« were shot by two teams, led by Urs Widmer Kevin Downey and Sure Ballman. The book also inspired Max Wisshak, one of the most recognised cave photographers, who dedicated his second book to the late photographer and publisher Urs Widmer.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46154757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Van Beynen Philip, E. Upton, Ela Bialkowska-Jelinska, Laurent Calcul
Highly karstified carbonate platforms such as Florida are characterized by rapid infiltration rates, highly permeable bedrock and the direct connection to the below aquifer through the high density of sinkholes. This combination of physical features makes the groundwater and aquifers highly vulnerable to contamination from synthetic chemicals commonly referred to as contaminants of emerging concern (CECs). The use of septic tanks, otherwise referred to as onsite water treatment systems (OWTS), promotes the introduction of CECs into the environment. In order to study the impacts of CECs from OWTS on a karst landscape, water, sediment, and vegetation samples were collected in a sinkhole lake surrounded by residential housing using this waste disposal method. The main question of this research project is what is the fate of CECs from OWTSs effluent within the catchment of a sinkhole lake? Liquid chromatograph mass spectrometry was used to analyze the samples for the presence of CECs. It was found that the relative quantity of CECs in the individual constituents is dependent upon 1) the hydrophobicity and polarity of the individual compound, 2) the specific sampling site, 3) the topography gradient, and 4) for vegetation, the connectedness of the sample type to the sediment. Hydrogeological studies have found that the sinkholes of the area are all connected to the below aquifer. Consequently, these CECs pose a risk of the contamination of the groundwater. This study is a temporal snapshot, that being the dry season of Florida which is most likely the time of lowest CEC contamination. It is imperative that sampling extend into the wet season when flushing of CECs from the OWTS may increase their concentrations in both the lake but also the aquifers especially since residents use well water as their source of potable water. While this study is based in Florida, we strongly suspect that our findings and recommendations are applicable more generally as OWTS are used throughout the many karst regions of the world.
{"title":"Fate of Contaminants of Emerging Concern in a Sinkhole Lake, Florida, USA","authors":"Van Beynen Philip, E. Upton, Ela Bialkowska-Jelinska, Laurent Calcul","doi":"10.3986/ac.v49i2-3.8007","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.8007","url":null,"abstract":"Highly karstified carbonate platforms such as Florida are characterized by rapid infiltration rates, highly permeable bedrock and the direct connection to the below aquifer through the high density of sinkholes. This combination of physical features makes the groundwater and aquifers highly vulnerable to contamination from synthetic chemicals commonly referred to as contaminants of emerging concern (CECs). The use of septic tanks, otherwise referred to as onsite water treatment systems (OWTS), promotes the introduction of CECs into the environment. In order to study the impacts of CECs from OWTS on a karst landscape, water, sediment, and vegetation samples were collected in a sinkhole lake surrounded by residential housing using this waste disposal method. The main question of this research project is what is the fate of CECs from OWTSs effluent within the catchment of a sinkhole lake? Liquid chromatograph mass spectrometry was used to analyze the samples for the presence of CECs. It was found that the relative quantity of CECs in the individual constituents is dependent upon 1) the hydrophobicity and polarity of the individual compound, 2) the specific sampling site, 3) the topography gradient, and 4) for vegetation, the connectedness of the sample type to the sediment. Hydrogeological studies have found that the sinkholes of the area are all connected to the below aquifer. Consequently, these CECs pose a risk of the contamination of the groundwater. This study is a temporal snapshot, that being the dry season of Florida which is most likely the time of lowest CEC contamination. It is imperative that sampling extend into the wet season when flushing of CECs from the OWTS may increase their concentrations in both the lake but also the aquifers especially since residents use well water as their source of potable water. While this study is based in Florida, we strongly suspect that our findings and recommendations are applicable more generally as OWTS are used throughout the many karst regions of the world.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48161604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cave ecosystems count to be extreme environments due to their stable temperature, darkness, high humidity rates, and limited organic materials. In this context, these ecosystems represent invaluable laboratories for microbiological studies. Although there are common features between the microorganism groups obtained from the culture-based microbiological studies conducted in the caves and the groups highlighted through molecular methods, the microorganism groups determined through this last method are richer. The detected microorganisms are variable depending on the characteristics of each cave. The aim of this study is to determine the microbial diversity in samples taken from 5 different regions (including regions visited by tourists) of Dupnisa Cave and to reveal the differences between these regions. This is the first microbiological study running in cave sediments of Dupnisa Cave System situated in the north-western of Turkey. In this study, using the Illumina MiSeq next-generation sequencing approach for analyses of Dupnisa Cave samples, 14 phyla and 298 genera as well as 2 phyla and 20 genera can be attributed to bacterial and archaea OTUs, respectively. Moreover, the bacterial community is dominated by the phyla Proteobacteria, Actinobacteria, Bacteroidetes, Gemmatimonadetes, Firmicutes, Nitrospirae, Chloroflexi and Acidobacteria distributed with 1 % and above. Archaeal community is represented by Thaumarchaeota and Euryarchaeota phyla. Proteobacteria is the most dominant bacterial phylum and Thaumarchaeota dominates the archaeal phyla. The highest number of types of bacteria according to Chao 1 richness estimation index were found at point AF (cave entrance / sediment), and that of types of archaea were found at point F2 (touristic area 2 / cave sediment). F2 was determined as the sampling point with the highest diversity of archaeal and bacterial genera according to Shannon-Wiener diversity index.
{"title":"The microbial community structure of the Dupnisa cave in Kırklareli, Turkey","authors":"Nihal Doğruöz-Güngör","doi":"10.3986/ac.v49i2-3.8575","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.8575","url":null,"abstract":"Cave ecosystems count to be extreme environments due to their stable temperature, darkness, high humidity rates, and limited organic materials. In this context, these ecosystems represent invaluable laboratories for microbiological studies. Although there are common features between the microorganism groups obtained from the culture-based microbiological studies conducted in the caves and the groups highlighted through molecular methods, the microorganism groups determined through this last method are richer. The detected microorganisms are variable depending on the characteristics of each cave. The aim of this study is to determine the microbial diversity in samples taken from 5 different regions (including regions visited by tourists) of Dupnisa Cave and to reveal the differences between these regions. This is the first microbiological study running in cave sediments of Dupnisa Cave System situated in the north-western of Turkey. In this study, using the Illumina MiSeq next-generation sequencing approach for analyses of Dupnisa Cave samples, 14 phyla and 298 genera as well as 2 phyla and 20 genera can be attributed to bacterial and archaea OTUs, respectively. Moreover, the bacterial community is dominated by the phyla Proteobacteria, Actinobacteria, Bacteroidetes, Gemmatimonadetes, Firmicutes, Nitrospirae, Chloroflexi and Acidobacteria distributed with 1 % and above. Archaeal community is represented by Thaumarchaeota and Euryarchaeota phyla. Proteobacteria is the most dominant bacterial phylum and Thaumarchaeota dominates the archaeal phyla. The highest number of types of bacteria according to Chao 1 richness estimation index were found at point AF (cave entrance / sediment), and that of types of archaea were found at point F2 (touristic area 2 / cave sediment). F2 was determined as the sampling point with the highest diversity of archaeal and bacterial genera according to Shannon-Wiener diversity index.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":"1 1","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41352933","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
J. Mulec, Blaž Kogovšek, S. Skok, R. Tomazin, S. Šturm, J. Avguštin
Escherichia coli, one of the primary intestinal commensal bacteria in humans and endothermic animals, is commonly considered an indicator of faecal pollution. E. coli strains were isolated from karst rivers under different hydrological conditions, from footpaths in tourist caves and from bat guano. Isolates were tested for phenotypic resistance to ampicillin, chloramphenicol, ciprofloxacin, nalidixic acid, tetracycline and trimethoprim. The highest percentage of antimicrobial resistant E. coli was found in karst waters, followed by those from surface swabs and from bat guano. Several isolates from rivers and swabs exhibited multidrug-resistant phenotype. Environmental conditions impact the populations of E. coli; a positive correlation between dissolved oxygen and E. coli counts, and a negative correlation between conductivity and E. coli concentrations have been observed for karst rivers. Malenščica (Slovenia), a drinking water resource with an extensive catchment area, contained a relative high percentage of antimicrobial-resistant E. coli strains. None of the isolates from bat guano was resistant to ampicillin, chloramphenicol, and tetracycline. Future monitoring of bats should consider a regular follow-up of indicative microbial disease indicators in fresh guano. Regular cleansing of tourist footpaths in caves and disinfection barriers at the cave entrances reduce the concentration and transmission of E. coli significantly. A future, more detailed, study on characterization of additional E. coli isolates is needed to reveal their pathogeneicity, mechanisms of antibiotic resistance, mobile genetic elements, and gene transfer frequencies to other members of the karst microbiome.
{"title":"Antimicrobial resistant Escherichia coli from karst waters, surfaces and bat guano in Slovenian caves","authors":"J. Mulec, Blaž Kogovšek, S. Skok, R. Tomazin, S. Šturm, J. Avguštin","doi":"10.3986/ac.v49i2-3.9103","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.9103","url":null,"abstract":"Escherichia coli, one of the primary intestinal commensal bacteria in humans and endothermic animals, is commonly considered an indicator of faecal pollution. E. coli strains were isolated from karst rivers under different hydrological conditions, from footpaths in tourist caves and from bat guano. Isolates were tested for phenotypic resistance to ampicillin, chloramphenicol, ciprofloxacin, nalidixic acid, tetracycline and trimethoprim. The highest percentage of antimicrobial resistant E. coli was found in karst waters, followed by those from surface swabs and from bat guano. Several isolates from rivers and swabs exhibited multidrug-resistant phenotype. Environmental conditions impact the populations of E. coli; a positive correlation between dissolved oxygen and E. coli counts, and a negative correlation between conductivity and E. coli concentrations have been observed for karst rivers. Malenščica (Slovenia), a drinking water resource with an extensive catchment area, contained a relative high percentage of antimicrobial-resistant E. coli strains. None of the isolates from bat guano was resistant to ampicillin, chloramphenicol, and tetracycline. Future monitoring of bats should consider a regular follow-up of indicative microbial disease indicators in fresh guano. Regular cleansing of tourist footpaths in caves and disinfection barriers at the cave entrances reduce the concentration and transmission of E. coli significantly. A future, more detailed, study on characterization of additional E. coli isolates is needed to reveal their pathogeneicity, mechanisms of antibiotic resistance, mobile genetic elements, and gene transfer frequencies to other members of the karst microbiome.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48542577","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. Petrović, D. Nikolic, Dušica Trnavac Bogdanović, I. Carevic
Protection and promotion of geoheritage has been changing and improving in recent decades, in line with the growing research in this field. Some research papers specifically study geomorphological geoheritage and introduce a special term − geomorphosite. Karst geomorphosites present specific objects of geomorphological heritage. On Kučaj and Beljanica mountains there is the largest karst area in Serbia. The purpose of this paper is to select and evaluate the scientific value of karst geomorphosites of Kučaj and Beljanica. More than one hundred karst geomorphosites were analyzed. In order to achieve more adequate coverage and representation, they were grouped into 25 geomorphotypes in three major geomorphological components of the investigated area. The results of this analysis highlighted the most important natural potentials of this area for establishing a karst-based geopark. More than 20 geomorphotypes have a positive recommendation index, which provides a good basis for further geotourism analysis.
{"title":"Assessment of karst geomorphosites on Kučaj and Beljanica mountains as a resource for the development of karst-based geopark","authors":"A. Petrović, D. Nikolic, Dušica Trnavac Bogdanović, I. Carevic","doi":"10.3986/ac.v49i2-3.8748","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.8748","url":null,"abstract":"Protection and promotion of geoheritage has been changing and improving in recent decades, in line with the growing research in this field. Some research papers specifically study geomorphological geoheritage and introduce a special term − geomorphosite. Karst geomorphosites present specific objects of geomorphological heritage. On Kučaj and Beljanica mountains there is the largest karst area in Serbia. The purpose of this paper is to select and evaluate the scientific value of karst geomorphosites of Kučaj and Beljanica. More than one hundred karst geomorphosites were analyzed. In order to achieve more adequate coverage and representation, they were grouped into 25 geomorphotypes in three major geomorphological components of the investigated area. The results of this analysis highlighted the most important natural potentials of this area for establishing a karst-based geopark. More than 20 geomorphotypes have a positive recommendation index, which provides a good basis for further geotourism analysis.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45653807","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Du Chengliang, Yongsheng Zhou, F. Gan, Yinxiang Chen
Integrated geophysical methods were used to investigate the geological conditions of karst collapses in Aotou, Conghua District, Guangzhou City. Based on audio frequency magnetotelluric (AMT) soundings, high-density electric signals and microtremors, a series of features, including the soil structure and thickness, faults, and hidden karst, were detected from shallow to deep subsurface regions in three-dimensional (3-D) space. These were then compared with geologic and drilling data. The measurements of micro-vibrations and high-density electric signals revealed that the strata in the collapsed area consists of clay and medium-grain sand, which is approximately 8–15 m thick and arranged as a multiple-element structure. The AMT soundings uncovered a hidden structure in the subsurface, which lies at the core of a syncline and adjacent to a contact zone between soluble limestone and non-soluble granite. Combined with the geologic data, the survey using the high-density electric method also showed that the study area hosts the Shidengzi Formation from the Datang Stage of the lower Carboniferous, which contain carbonaceous micrite and dolomitic limestone, locally intercalated with thin quartz siltstone, with well-developed karst. Collectively, the soil structure, hidden structure in the subsurface, and karst development provide the primary conditions for collapses. The main triggering factors for the karst collapses are seasonal variations in groundwater levels and excessive groundwater withdrawals. These results can provide guidance for the selection and application of geophysical methods for the examination of this issue in other areas with similar geology.
{"title":"Investigation of karst collapses using integrated geophysical methods: an example from Conghua district, Guangzhou city, China","authors":"Du Chengliang, Yongsheng Zhou, F. Gan, Yinxiang Chen","doi":"10.3986/ac.v49i2-3.7786","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.7786","url":null,"abstract":"Integrated geophysical methods were used to investigate the geological conditions of karst collapses in Aotou, Conghua District, Guangzhou City. Based on audio frequency magnetotelluric (AMT) soundings, high-density electric signals and microtremors, a series of features, including the soil structure and thickness, faults, and hidden karst, were detected from shallow to deep subsurface regions in three-dimensional (3-D) space. These were then compared with geologic and drilling data. The measurements of micro-vibrations and high-density electric signals revealed that the strata in the collapsed area consists of clay and medium-grain sand, which is approximately 8–15 m thick and arranged as a multiple-element structure. The AMT soundings uncovered a hidden structure in the subsurface, which lies at the core of a syncline and adjacent to a contact zone between soluble limestone and non-soluble granite. Combined with the geologic data, the survey using the high-density electric method also showed that the study area hosts the Shidengzi Formation from the Datang Stage of the lower Carboniferous, which contain carbonaceous micrite and dolomitic limestone, locally intercalated with thin quartz siltstone, with well-developed karst. Collectively, the soil structure, hidden structure in the subsurface, and karst development provide the primary conditions for collapses. The main triggering factors for the karst collapses are seasonal variations in groundwater levels and excessive groundwater withdrawals. These results can provide guidance for the selection and application of geophysical methods for the examination of this issue in other areas with similar geology.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45355400","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. Konsolaki, E. Vassilakis, L. Gouliotis, Georgios Kontostavlos, Vassilis Giannopoulos
Remote sensing techniques and laser scanning technology have given us the opportunity to study indoor environments, such as caves, with their complex and unique morphology. In the presented case study, we used a handheld laser scanner for acquiring points with projected coordinate information (X, Y, Z) covering the entire show cave of Koutouki; including its hidden passages and dark corners. The point cloud covers the floor, the walls, and the roof of the cave, as well as the stalactites, stalagmites and the connected columns that constitute the decoration of the cave. The absolute and exact placement of the point cloud within a geographic reference frame gives us the opportunity for three-dimensional measurements and detailed visualization of the subsurface structures. Using open - source software, we managed to make a quantification analysis of the terrain and generated morphological and geometric features of the speleothems. We identified 55 columns by using digital terrain analysis and processed them statistically in order to correlate them to the frame of the cave development. The parameters that derived are the contours, each column height, the speleothem geometry and volume, as well as the volume of the open space cavity. We argue that by the demonstrated methodology, it is possible to identify with high accuracy and detail: the geomorphological features of a cave, an estimate of the speleogenesis, and the ability to monitor the evolution of a karstic system.Key words: cave, laser scanner, 3D representation, speleothems, SLAM.
{"title":"High resolution digital 3D modelling of subsurface morphological structures of Koutouki Cave, Greece","authors":"A. Konsolaki, E. Vassilakis, L. Gouliotis, Georgios Kontostavlos, Vassilis Giannopoulos","doi":"10.3986/ac.v49i2-3.7708","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.7708","url":null,"abstract":"Remote sensing techniques and laser scanning technology have given us the opportunity to study indoor environments, such as caves, with their complex and unique morphology. In the presented case study, we used a handheld laser scanner for acquiring points with projected coordinate information (X, Y, Z) covering the entire show cave of Koutouki; including its hidden passages and dark corners. The point cloud covers the floor, the walls, and the roof of the cave, as well as the stalactites, stalagmites and the connected columns that constitute the decoration of the cave. The absolute and exact placement of the point cloud within a geographic reference frame gives us the opportunity for three-dimensional measurements and detailed visualization of the subsurface structures. Using open - source software, we managed to make a quantification analysis of the terrain and generated morphological and geometric features of the speleothems. We identified 55 columns by using digital terrain analysis and processed them statistically in order to correlate them to the frame of the cave development. The parameters that derived are the contours, each column height, the speleothem geometry and volume, as well as the volume of the open space cavity. We argue that by the demonstrated methodology, it is possible to identify with high accuracy and detail: the geomorphological features of a cave, an estimate of the speleogenesis, and the ability to monitor the evolution of a karstic system.Key words: cave, laser scanner, 3D representation, speleothems, SLAM. \u0000 ","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43586145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
P. Mlakar, B. Grasic, M. Božnar, Darko Popović, F. Gabrovšek
The paper presents the construction and operation of a cave information system on the example of the Postojnska jama cave. It thoroughly describes the construction of the basic modules of the cave information system, such as an automatic cave measuring station with sensors for measuring air temperature, air flow and CO2 concentration, and a central unit for collecting, saving, processing and displaying data. The system provides quality automatic measurements for the scientific study of the micrometeorology of karst caves. Its construction is based on good practices stemming from many years of experience in taking measurements in the external atmosphere and in karst caves. The paper is rich and comprehensive guideline for automatic cave measuring system construction for scientific and tourist management purposes.
{"title":"Information system for scientific study of the micrometeorology of karst caves – Case of Postojnska jama cave, Slovenija","authors":"P. Mlakar, B. Grasic, M. Božnar, Darko Popović, F. Gabrovšek","doi":"10.3986/ac.v49i2-3.7540","DOIUrl":"https://doi.org/10.3986/ac.v49i2-3.7540","url":null,"abstract":"The paper presents the construction and operation of a cave information system on the example of the Postojnska jama cave. It thoroughly describes the construction of the basic modules of the cave information system, such as an automatic cave measuring station with sensors for measuring air temperature, air flow and CO2 concentration, and a central unit for collecting, saving, processing and displaying data. The system provides quality automatic measurements for the scientific study of the micrometeorology of karst caves. Its construction is based on good practices stemming from many years of experience in taking measurements in the external atmosphere and in karst caves. The paper is rich and comprehensive guideline for automatic cave measuring system construction for scientific and tourist management purposes.","PeriodicalId":50905,"journal":{"name":"Acta Carsologica","volume":" ","pages":""},"PeriodicalIF":0.7,"publicationDate":"2020-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48072258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Lipar, I. Z. Pajnič, M. Cotman, J. Z. Piano, Jian-xin Zgao, D. Pekarovič, T. Leskovar
a loose/broken stalagmite containing small fragments of cemented bones were collected from the Postojna Cave to investigate whether deoxyribonucleic acid (DNA) can be determined. The study is complemented by the Fourier-transform infrared spectroscopy - attenuated total reflectance (FTIR-ATR) analysis in order to determine the alteration of the bones and to test whether this analysis can be used as an indicator of possible DNA preservation. In addition, geochemical analyses were conducted in order to determine whether the associated flowstone/stalagmite is suitable for elucidating the timing of bone thanatocoenosis and further palaeoenvironmental analyses. The organic matter (collagen) is poorly preserved. However, we succeeded in amplifying a 94 bp long fragment of the cytochrome b (Cyt b) gene of mitochondrial DNA (mtDNA) in polymerase chain reaction (PCR) for one sample, and in sequencing the amto that of the Cyt b of the cave bear (Ursus deningeri or Ursus spelaeus sensu lato). The uranium-thorium dating of the speleothem covering the bones revealed its thanatocoenosis occurred prior to 55 ka, most likely in the late marine isotope stage 4 or early marine isotope stage 3. High porosity and recrystallisation of the flowstone/stalagmite at this part of the cave prevent high-resolution palaeoclimatic interpretation; however, low-resolution stable isotope geochemistry suggests a steppe-like environment during the subsequent growth of the speleothem.
从Postojna洞穴中收集了一个松散/破碎的石笋，其中含有小块胶结骨碎片，以研究是否可以确定脱氧核糖核酸(DNA)。该研究由傅里叶变换红外光谱-衰减全反射(FTIR-ATR)分析补充，以确定骨骼的变化，并测试该分析是否可以用作可能的DNA保存的指标。此外，还进行了地球化学分析，以确定相关的流石/石笋是否适合阐明骨死亡的时间和进一步的古环境分析。有机物(胶原蛋白)保存得很差。然而，我们成功地用聚合酶链反应(PCR)扩增了一个样本线粒体DNA (mtDNA)的细胞色素b (Cyt b)基因的94bp长片段，并对洞熊(Ursus deningeri或Ursus spelaeus sensu lato)的Cyt b进行了测序。对覆盖骨骼的岩石层进行铀钍定年，发现其死亡时间早于55 ka，极有可能发生在海洋同位素4期晚期或海洋同位素3期早期。洞内这部分流石/石笋的高孔隙度和重结晶影响了高分辨率的古气候解释;然而，低分辨率稳定同位素地球化学表明，在洞穴层随后的生长过程中，存在类似草原的环境。
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