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Identification of the Epitope Recognized by the Anti-Red Sea Bream Iridovirus (RSIV) Monoclonal Antibody M10 Using a Phage Display RSIV Peptide Library 利用噬菌体展示RSIV肽库鉴定抗红鲷虹膜病毒(RSIV)单克隆抗体M10识别的表位
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2020-01-15 DOI: 10.3147/jsfp.54.83
T. Takano, T. Matsuyama, Y. Kawato, T. Sakai, J. Kurita, Yuta Matsuura, Sachiko Terashima, K. Nakajima, C. Nakayasu
Red sea bream iridoviral disease (RSIVD) spreads readily throughout the marine environment because of its wide variety of host species. Use of a rapid diagnostic method, such as the immunofluorescence antibody test, helps to control the disease, so the anti-RSIV monoclonal antibody M10 (mAb M10) has been developed in Japan. In the present study, we carried out epitope mapping using the phage display method to identify the antigen of mAb M10. A phage display RSIV peptide library was constructed to cover the entire genome of RSIV, then phage clones recognized by the antibody were selected by biopanning. The selected clones harbored partial fragments of the laminin-type epidermal growth factor-like domain (LEGFD) gene. N-terminal and C-terminal deletion peptides were then prepared from the amino acid sequence deduced from the smallest fragment to precisely determine the epitope. Finally, seven amino acids, EYDCPEY, located in the extracellular domain of the LEGFD protein were determined to be the epitope. Identical residues of the epitope were also identified from the LEGFD protein in other megalocytiviruses including the infectious spleen and kidney necrosis virus and turbot reddish body iridovirus. mAb M10 is considered to be widely available for the diagnostics of megalocytivirus infections.
红鲷虹膜病毒病(RSIVD)由于宿主种类繁多,极易在整个海洋环境中传播。使用快速诊断方法,如免疫荧光抗体试验,有助于控制疾病,因此日本已开发出抗rsiv单克隆抗体M10 (mAb M10)。本研究采用噬菌体展示法对mAb M10抗原进行表位定位。构建RSIV噬菌体展示肽文库,覆盖RSIV全基因组,通过生物筛选筛选抗体识别的噬菌体克隆。所选克隆含有层粘连蛋白型表皮生长因子样结构域(LEGFD)基因的部分片段。然后根据最小片段的氨基酸序列制备n端和c端缺失肽,以精确确定表位。最后,确定了位于LEGFD蛋白胞外结构域的7个氨基酸EYDCPEY为表位。在其他巨细胞病毒(包括感染性脾肾坏死病毒和大菱鲆红体虹膜病毒)中也发现了相同的LEGFD蛋白表位残基。mAb M10被认为广泛用于巨细胞病毒感染的诊断。
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引用次数: 5
Application of Hydrogen Peroxide-Melanin Bleaching and Fluorescent Nuclear Staining for Whole-Body Clearing and Imaging in Fish 双氧水-黑色素漂白及荧光核染色在鱼类全身清除成像中的应用
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2020-01-15 DOI: 10.3147/jsfp.54.101
K. Futami, Oto Furukawa, M. Maita, T. Katagiri
― Recently, our lab reported that CUBIC, a tissue-clearing technique, could help reveal the initial route of infection, its spread, and the localization of pathogens in infected goldfish Carassius auratus . However, this tech-nique, in its original form, failed to clear melanin pigmented parts of the fish. We show here that bleaching with H 2 O 2 clears melanin pigments of Black Moor goldfish without causing severe histological damage. Furthermore, nuclear staining with PI helps visualize the internal structures of cleared fish in a dark field. Since bleaching does not sig-nificantly quench the fluorescence of GFP, it may be applied to the in vivo imaging of GFP.
-最近,我们的实验室报告说,CUBIC,一种组织清除技术,可以帮助揭示感染的初始途径,其传播,以及感染金鱼鲫鱼病原体的定位。然而,这种技术在最初的形式下,无法清除鱼体内的黑色素。我们在这里表明,用h2o2漂白可以清除黑沼泽金鱼的黑色素,而不会造成严重的组织学损伤。此外,PI核染色有助于在黑暗中观察清除后的鱼的内部结构。由于漂白不明显猝灭GFP的荧光,因此可以应用于GFP的体内成像。
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引用次数: 3
Skin Injuries Contribute to Nocardiosis in Japanese Amberjack Seriola quinqueradiata 皮肤损伤与日本琥珀诺卡菌病有关
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-09-15 DOI: 10.3147/jsfp.54.64
Y. Miyoshi, Y. Fukuda, K. Ogawa
― We examined how mechanical damages to the skin and the infestation of the monogenean Benedenia seriolae on the skin affected Nocardia seriolae infection in Japanese amberjack Seriola quinqueradiata . After the skin was inflicted damages or after B. seriolae was dewormed with freshwater bathing, amberjacks were challenged with 1.0 × 10 3 CFU/mL N. seriolae by immersion. Survival rate was significantly lower in the skin-damaged group and the skin fluke-infested group than in their respec-tive control groups. The present study suggests that skin injuries and B. seriolae infection contribute to the N. seriolae infection in Japanese amberjack.
-我们研究了皮肤的机械损伤和单系贝氏菌在皮肤上的侵染如何影响日本琥珀中诺卡菌的感染。在皮肤损伤或淡水浴除虫后,用1.0 × 10 3 CFU/mL浸泡法攻毒琥珀树。皮肤损伤组和皮肤吸虫感染组的成活率明显低于对照组。本研究表明,皮肤损伤和梭状芽孢杆菌感染是导致日本琥珀中梭状芽孢杆菌感染的主要原因。
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引用次数: 3
Evaluation of Pathogenicity of Edwardsiella ictaluri to Riverine Fish Species Using an Immersion Infection Method 用浸渍法评价伊氏爱德华氏菌对河流鱼类的致病性
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-09-15 DOI: 10.3147/jsfp.54.61
Hisato Takeuchi, D. Nakano, Mayu Iwadare, Ryuji Tomono, T. Imai, Kazutomo Hori, Hiroaki Izumi, A. Namba, Sonoko Shimizu, T. Nakai, N. Mano
Experimental infection trials of six riverine fish species with Edwardsiella ictaluri were performed using an immersion method at three water temperatures, 20°C, 25°C, and 30°C. At 20°C, mortalities were recorded only in ayu Plecoglossus altivelis and amur catfish Silurus asotus. Whereas, at 25°C or 30°C, mortality events occurred in other species including Japanese dace Tribilodon hakonensis, gibachi Tachysurus tokiensis, and Japanese eel Anguilla japonica, except for common carp Cyprinus carpio, and high (≥80%) cumulative mortalities were recorded in ayu, amur catfish, and gibachi. These results suggest that many riverine fishes are at risk of E. ictaluri infection during periods of high water temperature.
采用浸泡法在20°C、25°C和30°C三种水温下对6种河流鱼类进行了爱德华氏菌感染实验。在20°C时,只记录了ayu Plecoglossus altivelis和amur catfish Silurus asotus的死亡率。而在25°C或30°C时,除鲤鱼鲤外,hakontribilodon hakonensis、tokiensis Tachysurus tokiensis和日本鳗鲡(Anguilla japonica)等其他鱼类均出现了死亡事件,阿玉、黑龙江鲶鱼和gibachi的累积死亡率较高(≥80%)。这些结果表明,在高水温时期,许多河流鱼类都有感染伊氏伊氏杆菌的风险。
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引用次数: 4
Development of a Real-time PCR to Detect Genotypes A and B in Flavobacterium psychrophilum 嗜冷黄杆菌a、B基因型实时PCR检测方法的建立
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-09-15 DOI: 10.3147/jsfp.54.58
Ryo Inoue, T. Takase
― Flavobacterium psychrophilum , the causative agent of bacterial cold-water disease, is classified into two genotypes (A and B) based on peptidyl-prolyl cis-trans isomerase C (PPIC) gene polymorphism. These are routinely detected using restriction fragment length polymorphism of the PCR amplicon (PCR-RFLP). Since this method is difficult and time-consuming, a simple method is required. Here we developed a new method using real-time PCR assay (TaqMan probe assay) to detect single nucleotide polymorphism (SNP) in PPIC region. We designed the probes on a SNP site and performed TaqMan probe genotyping. The results obtained using this method was in line with those of RFLP. This new method could easily and rapidly determine F. psychrophilum genotypes.
-根据肽基脯氨酸顺式反式异构酶C (PPIC)基因多态性,嗜冷黄杆菌是细菌性冷水病的病原体,可分为A型和B型两种基因型。这些是常规检测使用限制性片段长度多态性的PCR扩增子(PCR- rflp)。由于这种方法既困难又费时,所以需要一种简单的方法。本研究建立了一种实时荧光定量PCR (TaqMan探针法)检测PPIC区域单核苷酸多态性(SNP)的新方法。我们在SNP位点上设计探针,并进行TaqMan探针基因分型。该方法与RFLP的结果基本一致。该方法可以简便、快速地确定嗜冷性冷梭菌的基因型。
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引用次数: 0
Epidemiological Study on Newly Emerging Lactococcus garvieae Serotype II Isolated from Marine Fish Species in Japan 日本海鱼中新分离的鸡乳球菌血清型流行病学研究
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-09-15 DOI: 10.3147/jsfp.54.51
Yin-Ze Shi, I. Nishiki, S. Yanagi, Terutoyo Yoshida
Lactococcus garvieae serotype II, a newly emerging causal pathogen of lactococcal infection, has spread to fish farms since 2012, and its damage to aquaculture has increased. A total of 161 strains were isolated from four fish species, yellowtail Seriola quinqueradiata, amberjack S. dumerili, kingfish S. lalandi, and striped jack Pseudocaranx dentex, in eight prefectures between 2012 and 2017. This is the first epidemiological study on L. garvieae serotype II, by using agglutination titers against antisera for diagnosis, biased sinusoidal field gel electrophoresis (BSFGE) analysis, and antimicrobial susceptibility test. Almost none of these strains were agglutinated with anti-Ia serum (anti-KG serum), except for two strains agglutinated with both anti-Ia and II sera. BSFGE analysis revealed that genetically homogeneous L. garvieae serotype II has spread to fish farms since the first outbreak in 2012, and the strains resistant to lincomycin were already found in 2015.
garvieae乳球菌血清型(Lactococcus garvieae serotype II)是一种新出现的乳球菌感染病原,自2012年开始在养鱼场蔓延,对水产养殖造成的危害越来越大。2012 - 2017年,在中国8个县共从quinqueradiata黄尾鱼、amberjack S. dumerili、kingfish S. lalandi和striped jack Pseudocaranx dentex 4种鱼类中分离到161个菌株。本文首次采用抗血清凝集滴度、偏正弦场凝胶电泳(BSFGE)分析和药敏试验对鸡乳杆菌II型进行流行病学研究。除2株菌株同时与抗ia和抗II血清凝集外,其余菌株几乎不与抗ia血清(抗kg血清)凝集。BSFGE分析显示,自2012年首次暴发以来,遗传同质的鸡乳杆菌血清II型已传播到养鱼场,2015年已发现对林可霉素耐药的菌株。
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引用次数: 7
A Survey of Water Temperature for Production of Juvenile Ayu Plecoglossus altivelis 阿育鱼幼鱼生产水温的调查
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-06-15 DOI: 10.3147/jsfp.54.40
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引用次数: 1
Mortality of Spats of Manila Clam Ruditapes philippinarum Experimentally Challenged with the Protozoan Parasite Perkinsus olseni 原生寄生虫奥氏珀金丝虫侵染菲律宾马尼拉蛤幼体的实验研究
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-06-15 DOI: 10.3147/JSFP.54.34
Tsukasa Waki, T. Yoshinaga
― In a previous field survey of Perkinsus olseni in Manila clams in a tidal flat contaminated with the parasite, the parasite was not detected in spats smaller than 2 mm in shell length collected between April and June. To under-stand the reason, we undertook an experimental challenge, exposing clam spats to the zoospores of parasite. The spats became infected and began to die when mean infection intensity reached about 10 6 cells/g soft tissue. Our results, in conjunction with previously reported filtration rates of Manila clams, suggest the absence of infected spats was attributable to clams’ low filtration and low zoospore densities.
-先前在受寄生虫污染的潮滩对马尼拉蛤进行的实地调查显示,在4月至6月期间收集的壳长小于2毫米的小块中没有检测到寄生虫。为了了解原因,我们进行了一项实验挑战,将蛤蜊的口舌暴露于寄生虫的游动孢子中。当平均感染强度达到10.6个细胞/g左右时,斑马鱼开始感染并死亡。我们的研究结果,结合先前报道的马尼拉蛤的过滤率,表明没有受感染的口角是由于蛤的低过滤和低游动孢子密度。
{"title":"Mortality of Spats of Manila Clam Ruditapes philippinarum Experimentally Challenged with the Protozoan Parasite Perkinsus olseni","authors":"Tsukasa Waki, T. Yoshinaga","doi":"10.3147/JSFP.54.34","DOIUrl":"https://doi.org/10.3147/JSFP.54.34","url":null,"abstract":"― In a previous field survey of Perkinsus olseni in Manila clams in a tidal flat contaminated with the parasite, the parasite was not detected in spats smaller than 2 mm in shell length collected between April and June. To under-stand the reason, we undertook an experimental challenge, exposing clam spats to the zoospores of parasite. The spats became infected and began to die when mean infection intensity reached about 10 6 cells/g soft tissue. Our results, in conjunction with previously reported filtration rates of Manila clams, suggest the absence of infected spats was attributable to clams’ low filtration and low zoospore densities.","PeriodicalId":51052,"journal":{"name":"Fish Pathology","volume":"35 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-06-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84537184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Phylogenetic Analysis with Complete Mitochondrial Genome Sequences of Benedenia seriolae Specimens Derived from Japanese Seriola spp. 日本小孢子虫标本线粒体全基因组序列的系统发育分析。
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-06-15 DOI: 10.3147/JSFP.54.27
S. Kawato, Keigo Kobayashi, S. Shirakashi, S. Yanagi, Y. Fukuda, H. Yamashita, R. Nozaki, I. Hirono, H. Kondo
― Infection with the skin fluke Benedenia seriolae is a serious threat of yellowtail aquaculture. Development of genomic resources and molecular markers for B. seriolae is an essential infrastructure to develop control strategies against B. seriolae infections. As a seminal study to establish the genomic resources of the Japanese B. seriolae populations, we sequenced the complete mitochondrial genome (mitogenome) sequences of 12 B. seriolae specimens collected from four prefectures in Japan. The Japanese B. seriolae mitogenomes were mutually 99% identical, while the identity was 85% when compared to that of an Australian specimen. Furthermore, the gene arrangement in the Japanese B. seriolae mitogenome was slightly different from that in the Australian specimen. The substantial mitogenomic divergence between the Australian and Japanese specimens indicates that B. seriolae is composed of molecularly divergent populations. Variable sites were dispersed in the mitogenome of the Japanese B. seriolae . Phylogenetic relationships among the Japanese B. seriolae specimens did not reflect the host species or geographic distributions within Japan.
-皮肤吸虫感染对黄尾鱼养殖业构成严重威胁。开发大肠杆菌的基因组资源和分子标记是制定防治策略的基础。作为一项具有开创性的研究,我们对来自日本4个县的12个白蛉标本的线粒体全基因组(mitogenome)序列进行了测序。日本的梭状芽孢杆菌有丝分裂基因组相互间的一致性为99%,而与澳大利亚标本的一致性为85%。此外,日本梭状芽孢杆菌有丝分裂基因组的基因排列与澳大利亚标本略有不同。澳大利亚和日本标本之间的有丝分裂基因组差异表明,该菌株是由分子分化的种群组成的。变异位点分布在日本梭状芽孢杆菌的丝裂基因组中。日本血吸虫标本间的系统发育关系不能反映寄主种类和日本境内的地理分布。
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引用次数: 4
A Novel PCR-RFLP Genotyping of Flavobacterium psychrophilum Targeting the gyrB Region 针对gyrB区嗜冷黄杆菌的新型PCR-RFLP基因分型
IF 0.6 4区 农林科学 Q4 FISHERIES Pub Date : 2019-06-15 DOI: 10.3147/JSFP.54.37
S. Izumi, H. Arai, Kyuma Suzuki, F. Aranishi
― A novel PCR-RFLP typing method was developed using PCR primers specific for the B subunit of DNA gyrase gene ( gyrB ) of Flavobacterium psychrophilum and restriction endonuclease Bsp 119I. With this PCR-RFLP, 300 isolates of F. psychrophilum were classified into two genotypes (197 and 103 isolates), and the respective genotypes were correlated with the host fish species from which the isolates were derived. These isolates were further subdivided into 12 genotypes by combining with three previous PCR-RFLPs. It is suggested that this PCR-RFLP typing system can be a useful tool in epizootiological studies on bacterial cold-water disease.
-利用嗜冷黄杆菌DNA旋切酶基因(gyrB) B亚基和限制性内切酶Bsp 119I特异性PCR引物,建立了一种新的PCR- rflp分型方法。利用该PCR-RFLP方法,将300株嗜冷致病菌分离株分为197株和103株两种基因型,并与分离株所属的寄主鱼类进行了相关分析。结合之前的三个PCR-RFLPs,将这些分离物进一步细分为12个基因型。提示该PCR-RFLP分型系统可作为细菌性冷水病流行病学研究的有效工具。
{"title":"A Novel PCR-RFLP Genotyping of Flavobacterium psychrophilum Targeting the gyrB Region","authors":"S. Izumi, H. Arai, Kyuma Suzuki, F. Aranishi","doi":"10.3147/JSFP.54.37","DOIUrl":"https://doi.org/10.3147/JSFP.54.37","url":null,"abstract":"― A novel PCR-RFLP typing method was developed using PCR primers specific for the B subunit of DNA gyrase gene ( gyrB ) of Flavobacterium psychrophilum and restriction endonuclease Bsp 119I. With this PCR-RFLP, 300 isolates of F. psychrophilum were classified into two genotypes (197 and 103 isolates), and the respective genotypes were correlated with the host fish species from which the isolates were derived. These isolates were further subdivided into 12 genotypes by combining with three previous PCR-RFLPs. It is suggested that this PCR-RFLP typing system can be a useful tool in epizootiological studies on bacterial cold-water disease.","PeriodicalId":51052,"journal":{"name":"Fish Pathology","volume":"25 1","pages":""},"PeriodicalIF":0.6,"publicationDate":"2019-06-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83024056","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
期刊
Fish Pathology
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