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Spatial patterns and biodiversity in rock-paper-scissors models with regional unevenness 具有区域不均匀性的石头剪刀布模型的空间格局与生物多样性
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-05-15 DOI: 10.1088/2632-072X/acd610
J. Menezes, M. Tenorio
Climate changes may affect ecosystems destabilising relationships among species. We investigate the spatial rock-paper-scissors models with a regional unevenness that reduces the selection capacity of organisms of one species. Our results show that the regionally weak species predominates in the local ecosystem, while spiral patterns appear far from the region, where individuals of every species play the rock-paper-scissors game with the same strength. Because the weak species controls all local territory, it is attractive for the other species to enter the local ecosystem to conquer the territory. However, our stochastic simulations show that the transitory waves formed when organisms of the strong species reach the region are quickly destroyed because of local strength unbalance in the selection game rules. Computing the effect of the topology on population dynamics, we find that the prevalence of the weak species becomes more significant if the transition of the selection capacity to the area of uneven rock-paper-scissors rules is smooth. Finally, our findings show that the biodiversity loss due to the arising of regional unevenness is minimised if the transition to the region where the cyclic game is unbalanced is abrupt. Our results may be helpful to biologists in comprehending the consequences of changes in the environmental conditions on species coexistence and spatial patterns in complex systems.
气候变化可能会影响生态系统,破坏物种之间的关系。我们研究了具有区域不均匀性的空间岩石剪刀模型,该模型降低了一个物种的生物的选择能力。我们的研究结果表明,区域弱势物种在当地生态系统中占主导地位,而螺旋模式在远离该区域的地方出现,每个物种的个体都以相同的强度玩着石头剪刀游戏。由于弱势物种控制着当地的所有领土,因此其他物种进入当地生态系统以征服领土是有吸引力的。然而,我们的随机模拟表明,由于选择博弈规则中的局部强度失衡,当强壮物种的生物到达该区域时形成的瞬态波会迅速被破坏。通过计算拓扑结构对种群动态的影响,我们发现,如果选择能力向不均匀岩石剪刀规则区域的过渡是平滑的,那么弱物种的普遍性就会变得更加显著。最后,我们的研究结果表明,如果突然过渡到循环博弈不平衡的区域,则区域不平衡导致的生物多样性损失将降至最低。我们的研究结果可能有助于生物学家理解环境条件的变化对复杂系统中物种共存和空间模式的影响。
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引用次数: 0
Mitigation of adversarial attacks on voter model dynamics by network heterogeneity 利用网络异质性缓解对选民模型动力学的对抗性攻击
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-05-04 DOI: 10.1088/2632-072X/acd296
Katsumi Chiyomaru, Kazuhiro Takemoto
Voter model dynamics in complex networks are vulnerable to adversarial attacks. In particular, the voting outcome can be inverted by adding extremely small perturbations that are strategically generated in social networks, even when one opinion is dominant over the other. However, the mitigation of adversarial attacks on the voter model dynamics in complex networks has not been thoroughly investigated. Thus, we examined network structures that could mitigate adversarial attacks using model networks and real-world networks, considering that the network structure affects the voter model dynamics. Numerical simulations demonstrated that the heterogeneity of node degrees in the networks (degree heterogeneity) significantly mitigates adversarial attacks. In particular, for complex networks with a power-law degree distribution P(k)∼k−γ , the mitigation effect is significant for γ⩽3 . However, the mitigation effect of the degree heterogeneity was relatively weak for large and dense networks. The degree correlation and clustering in the networks exhibited almost no mitigation effect. The results enhance our understanding of how opinion dynamics and collective decision-making are distorted in social networks and may be useful for considering defense strategies against adversarial attacks.
复杂网络中的选民模型动态容易受到对抗性攻击。特别是,投票结果可以通过在社交网络中战略性地产生极小的扰动来逆转,即使一种意见占主导地位。然而,在复杂网络中,对选民模型动力学的对抗性攻击的缓解尚未得到彻底的研究。因此,考虑到网络结构会影响选民模型动态,我们研究了可以使用模型网络和现实世界网络减轻对抗性攻击的网络结构。数值模拟表明,网络中节点度的异质性(度异质性)显著减轻了对抗性攻击。特别是,对于具有幂律度分布P(k) ~ k−γ的复杂网络,γ≥3时的缓解效果显著。然而,对于大型和密集的网络,程度异质性的缓解作用相对较弱。网络中的关联度和聚类几乎没有减缓作用。研究结果增强了我们对社会网络中舆论动态和集体决策如何被扭曲的理解,并可能有助于考虑针对对抗性攻击的防御策略。
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引用次数: 0
Estimating prediction horizon of reservoir computer on L63 system when observed variables are incomplete L63系统观测变量不完全时储层计算机预测层位估计
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-05-03 DOI: 10.1088/2632-072X/acd21c
Yu Huang, Zuntao Fu
Reservoir computer (RC) is an attractive neural computing framework that can well predict the dynamics of chaotic systems. Previous knowledge of the RC performance is established on the case that all variables in a chaotic system are completely observed. However, in practical circumstances the observed variables from a dynamical system are usually incomplete, among which there is a lack of understanding of the RC performance. Here we utilize mean error growth curve to estimate the RC prediction horizon on the Lorenz63 system (L63), and particularly we investigate the scenario of univariate time series. Our results demonstrate that the prediction horizon of RC outperforms that of local dynamical analogs of L63, and the state-space embedding technique can improve the RC prediction in case of incomplete observations. We then test the conclusion on the more complicated systems, and extend the method to estimate the intraseasonal predictability of atmospheric circulation indices. These results could provide indications for future developments and applications of the RC.
水库计算机(RC)是一种有吸引力的神经计算框架,可以很好地预测混沌系统的动力学。以前对RC性能的了解是建立在混沌系统中所有变量都被完全观察到的情况下。然而,在实际情况下,从动力系统观察到的变量通常是不完整的,其中缺乏对RC性能的理解。本文利用平均误差增长曲线来估计Lorenz63系统(L63)的RC预测水平,并特别研究了单变量时间序列的情况。结果表明,RC的预测水平优于L63的局部动态类似物,并且状态空间嵌入技术可以在观测不完全的情况下提高RC的预测水平。然后,我们在更复杂的系统上验证了结论,并将该方法推广到估计大气环流指数的季节内可预测性。这些结果可以为未来RC的发展和应用提供指示。
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引用次数: 0
Neglecting complex network structures underestimates delays in a large-capital project 忽略复杂的网络结构低估了大型项目的延迟
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-04-20 DOI: 10.1088/2632-072X/accef0
C. Ellinas, D. Avraam, C. Nicolaides
Completing large-scale projects on time is a daunting challenge, partly due to the intricate network of dependencies between a project’s activities. To support this challenge, existing theory focuses on predicting whether a delay in completing a single activity is likely to spread and impact downstream activities. Using fine-grained information from 68 546 activities and 84 934 pairs, associated with the delivery of a $1.86Bn infrastructure project, we show that the core mechanism that underpins existing theory underestimates delay propagation. To elucidate the mechanisms that drive delay, we generated null models that destroyed the structural and temporal correlations of the original project activity network. By doing so, we argue that this underestimation is the result of neglecting endogenous structural features within the project’s activity network. Formulating a new mechanism that utilizes both temporal and structural features may help improve our capacity to predict how delays spread within projects.
按时完成大型项目是一项艰巨的挑战,部分原因在于项目活动之间错综复杂的依赖关系网络。为了支持这一挑战,现有的理论侧重于预测完成单个活动的延迟是否可能蔓延并影响下游活动。使用来自68546个活动和84934对的细粒度信息,与18.6亿美元基础设施项目的交付相关,我们表明支撑现有理论的核心机制低估了延迟传播。为了阐明驱动延迟的机制,我们生成了零模型,该模型破坏了原始项目活动网络的结构和时间相关性。通过这样做,我们认为这种低估是忽视了项目活动网络内的内生结构特征的结果。制定一种利用时间和结构特征的新机制可能有助于提高我们预测延迟如何在项目中传播的能力。
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引用次数: 0
Smallworldness in hypergraphs 超图中的小世界性
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-04-18 DOI: 10.1088/2632-072X/acf430
Tanu Raghav, S. Boccaletti, S. Jalan
Most real-world networks are endowed with the small-world property, by means of which the maximal distance between any two of their nodes scales logarithmically rather than linearly with their size. The evidence sparkled a wealth of studies trying to reveal possible mechanisms through which the pairwise interactions amongst the units of a network are structured in a way to determine such observed regularity. Here we show that smallworldness occurs also when interactions are of higher order. Namely, by considering Q-uniform hypergraphs and a process through which connections can be randomly rewired with given probability p, we find that such systems may exhibit prominent clustering properties in connection with small average path lengths for a wide range of p values, in analogy to the case of dyadic interactions. The nature of small-world transition remains the same at different orders Q ( =2,3,4,5, and 6) of the interactions, however, the increase in the hyperedge order reduces the range of rewiring probability for which smallworldness emerge.
大多数现实世界的网络都具有小世界特性,即网络中任意两个节点之间的最大距离与网络大小成对数关系,而不是线性关系。这些证据激发了大量的研究,试图揭示可能的机制,通过这种机制,网络单元之间的成对相互作用以某种方式确定了这种观察到的规律性。在这里,我们表明小世界也会发生在高阶互动中。也就是说,通过考虑q -均匀超图和一个连接可以在给定概率p下随机重新连接的过程,我们发现这样的系统在广泛的p值范围内具有较小的平均路径长度时可能表现出突出的聚类性质,类似于二元相互作用的情况。在不同阶次Q(=2、3、4、5和6)的相互作用下,小世界转换的性质保持不变,但是,超边缘阶次的增加减少了小世界出现的重新布线概率的范围。
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引用次数: 0
Effects of active noise on transition-path dynamics 有源噪声对过渡路径动力学的影响
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-04-12 DOI: 10.1088/2632-072X/accc69
K. Goswami, R. Metzler
We propose an extension of the existing model describing a biomolecular reaction such as protein folding or ligand binding which is usually visualised as the barrier crossing of a diffusing particle in a double-well potential. In addition to the thermal noise, an active noise modelled in terms of an Ornstein–Uhlenbeck process is introduced to the dynamics. Within this framework, we investigate the transition-path properties of an underdamped particle surmounting an energy barrier, and we show explicitly how these properties are affected by the activity and persistence of the particle. Our theoretical study suggests that an active particle can cross the barrier at comparatively shorter timescales by lowering the (effective) barrier height. In particular, we study how the persistence time of the active force alters the transition-path time (TPT) at different friction limits. Interestingly, in one of our models we find a nonmonotonic behaviour of the TPT which is absent in the overdamped limit. The framework presented here can be useful in designing a reaction in a non-equilibrium environment, particularly inside a living biological cell in which active fluctuations keep the system out of equilibrium.
我们提出了现有模型的扩展,该模型描述了生物分子反应,如蛋白质折叠或配体结合,通常被视为双阱势中扩散粒子的屏障穿越。除了热噪声外,还引入了基于Ornstein-Uhlenbeck过程建模的主动噪声。在此框架内,我们研究了克服能量势垒的欠阻尼粒子的过渡路径特性,并明确地展示了这些特性如何受到粒子的活性和持久性的影响。我们的理论研究表明,通过降低(有效)势垒高度,活性粒子可以在相对较短的时间尺度内穿过势垒。特别地,我们研究了在不同摩擦极限下,主动力的持续时间如何改变过渡路径时间(TPT)。有趣的是,在我们的一个模型中,我们发现了在过阻尼极限中不存在的TPT的非单调行为。本文提出的框架可以用于设计非平衡环境中的反应,特别是在活性波动使系统处于不平衡状态的活生物细胞内。
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引用次数: 3
Sparse block-structured random matrices: universality 稀疏块结构随机矩阵:通用性
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-03-23 DOI: 10.1088/2632-072X/acc71a
G. M. Cicuta, M. Pernici
We study ensembles of sparse block-structured random matrices generated from the adjacency matrix of a Erdös–Renyi random graph with N vertices of average degree Z, inserting a real symmetric d × d random block at each non-vanishing entry. We consider several ensembles of random block matrices with rank r < d and with maximal rank, r = d. The spectral moments of the sparse block-structured random matrix are evaluated for N→∞ , d finite or infinite, and several probability distributions for the blocks (e.g. fixed trace, bounded trace and Gaussian). Because of the concentration of the probability measure in the d→∞ limit, the spectral moments are independent of the probability measure of the blocks (with mild assumptions of isotropy, smoothness and sub-Gaussian tails). The effective medium approximation is the limiting spectral density of the sparse block-structured random ensembles with finite rank. Analogous classes of universality hold for the Laplacian sparse block-structured ensemble. The same limiting distributions are obtained using random regular graphs instead of Erdös–Renyi graphs.
我们研究了由具有N个平均度为Z的顶点的Erdös–Renyi随机图的邻接矩阵生成的稀疏块结构随机矩阵的集合,插入了实对称d × d随机块。我们考虑秩为r的随机块矩阵的几个集合 < d和具有最大秩的r = d.对于N,评估稀疏块结构随机矩阵的谱矩→∞ , d有限或无限,以及块的几个概率分布(例如,固定轨迹、有界轨迹和高斯)。由于d中概率测度的集中→∞ 极限,谱矩与块的概率测度无关(具有各向同性、光滑性和亚高斯尾的温和假设)。有效介质近似是具有有限秩的稀疏块结构随机系综的极限谱密度。拉普拉斯稀疏块结构系综具有类似的普适性类。使用随机正则图代替Erdös–Renyi图获得了相同的极限分布。
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引用次数: 0
Online identity as a collective labeling process 网络身份作为一个集体标签的过程
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-03-21 DOI: 10.1088/2632-072X/acc62c
Alexander T. J. Barron, Marijn ten Thij, J. Bollen
Expressing identity socially involves a balance between conformity and innovation. One can adopt existing labels to express belonging to a certain community or introduce new labels to express an individual sense of identity. In such a process of co-creation, the existing identity labels of a community shape one’s sense of identity, while individual expression changes that of a community. Social media has introduced new opportunities to study the expression of collective identity. Here we study the group behavior of individuals defining their identities with hashtag self-labels in their Twitter profiles from mid-2017 through 2019. These timelines of personal self-labeling show behavior incorporating innovation, conservation, and social conformity when defining self. We show that the collective co-labeling of popular concepts in the context of identity, such as #resist and #maga, follow the dynamics of a modified Yule–Simon model balancing novelty and conformity. The dynamics of identity expression resemble the collective tagging processes of folksonomies, indicating a similarity between the collective tagging of external objects and the collective labeling of ourselves. Our work underpins a better understanding of how online environments mediate the evolution of collective identity which plays an increasingly important role in the establishment of community values and identity politics.
在社会上表达身份认同涉及从众和创新之间的平衡。人们可以采用现有的标签来表达对某个社区的归属,也可以引入新的标签来表示个人的认同感。在这样一个共同创造的过程中,一个社区现有的身份标签塑造了一个人的身份感,而个人的表达则改变了一个社区的身份感。社交媒体为研究集体身份的表达提供了新的机会。在这里,我们研究了2017年年中至2019年期间,在推特个人资料中使用标签自标签定义身份的个人的群体行为。这些个人自我标签的时间线显示了在定义自我时结合创新、保护和社会整合的行为。我们表明,在身份背景下,流行概念的集体共标记,如#resist和#maga,遵循了平衡新颖性和一致性的修正Yule–Simon模型的动力学。身份表达的动力学类似于民族学的集体标记过程,表明外部对象的集体标记和我们自己的集体标记之间的相似性。我们的工作为更好地理解网络环境如何介导集体身份的演变奠定了基础,集体身份在建立社区价值观和身份政治中发挥着越来越重要的作用。
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引用次数: 0
Information parity increases on functional brain networks under influence of a psychedelic substance 在迷幻物质的影响下,大脑功能网络的信息平价增加
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-03-07 DOI: 10.1088/2632-072X/acc22b
A. Viol, G. Viswanathan, Oleksandra Soldatkina, Fernanda Palhano-Fontes, H. Onias, D. D. de Araujo, Philipp Hoevel
The physical basis of consciousness is one of the most intriguing open questions that contemporary science aims to solve. By approaching the brain as an interactive information system, complex network theory has greatly contributed to understand brain process in different states of mind. We study a non-ordinary state of mind by comparing resting-state functional brain networks of individuals in two different conditions: before and after the ingestion of the psychedelic brew Ayahuasca. In order to quantify the functional, statistical symmetries between brain region connectivity, we calculate the pairwise information parity of the functional brain networks. Unlike the usual approach to quantitative network analysis that considers only local or global scales, information parity instead quantifies pairwise statistical similarities over the entire network structure. We find an increase in the average information parity on brain networks of individuals under psychedelic influences. Notably, the information parity between regions from the limbic system and frontal cortex is consistently higher for all the individuals while under the psychedelic influence. These findings suggest that the resemblance of statistical influences between pair of brain regions activities tends to increase under Ayahuasca effects. This could be interpreted as a mechanism to maintain the network functional resilience.
意识的物理基础是当代科学试图解决的最有趣的开放性问题之一。复杂网络理论将大脑视为一个相互作用的信息系统,对理解不同心理状态下的大脑过程有很大贡献。我们通过比较个体在两种不同条件下的静息状态功能大脑网络来研究一种不寻常的心理状态:摄入迷幻饮料死藤水之前和之后。为了量化脑区连接之间的功能、统计对称性,我们计算了脑功能网络的成对信息奇偶性。与通常只考虑局部或全局尺度的定量网络分析方法不同,信息奇偶性对整个网络结构的两两统计相似性进行量化。我们发现,在迷幻药影响下,个体大脑网络的平均信息平价有所增加。值得注意的是,在迷幻影响下,所有人的边缘系统和额叶皮层区域之间的信息均等度都一贯较高。这些发现表明,在死藤水的作用下,对大脑区域活动的统计影响的相似性倾向于增加。这可以解释为维持网络功能弹性的一种机制。
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引用次数: 1
Growing inequality in systems showing Zipf’s law 系统中不断增长的不平等体现了齐夫定律
IF 2.7 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Pub Date : 2023-03-02 DOI: 10.1088/2632-072X/acc0c1
Giordano De Marzo, F. Attili, L. Pietronero
A central problem in economics and statistics is the assessment of income or wealth inequality starting from empirical data. Here we focus on the behavior of Gini index, one of the most used inequality measures, in presence of Zipf’s law, a situation which occurs in many complex financial and economical systems. First, we show that the application of asymptotic formulas to finite size systems always leads to an overestimation of inequality. We thus compute finite size corrections and we show that depending on Zipf’s exponent two distinct regimes can be observed: low inequality, where Gini index is less than one and maximal inequality, where Gini index asymptotically tends to its maximal value one. In both cases, the inequality of an expanding system slowly increases just as effect of growth, with a scaling never faster than the inverse of the size. We test our computations on two real systems, US cities and the cryptocurrency market, observing in both cases an increase of inequality that is completely explained by Zipf’s law and the systems expanding. This shows that in growing complex systems finite size effects must be considered in order to properly assess if inequality is increasing due to natural growth processes or if it is produced by a change in the economical structure of the systems. Finally we discuss how such effects must be carefully considered when analyzing survey data.
经济学和统计学的一个核心问题是从实证数据开始评估收入或财富不平等。在这里,我们关注基尼指数的行为,基尼指数是最常用的不平等指标之一,在齐普夫定律的存在下,这种情况发生在许多复杂的金融和经济系统中。首先,我们证明了渐近公式在有限尺寸系统中的应用总是会导致对不等式的高估。因此,我们计算了有限大小的校正,并表明根据Zipf指数,可以观察到两种不同的状态:低不等式,其中Gini指数小于1,最大不等式,其中基尼指数渐近趋向于其最大值1。在这两种情况下,扩张系统的不平等性都会随着增长的影响而缓慢增加,其比例永远不会快于规模的倒数。我们在美国城市和加密货币市场这两个真实系统上测试了我们的计算,在这两种情况下都观察到不平等的增加,这完全可以用齐普夫定律和系统的扩张来解释。这表明,在不断增长的复杂系统中,必须考虑有限规模效应,以便正确评估不平等是由于自然增长过程而增加,还是由于系统经济结构的变化而产生。最后,我们讨论了在分析调查数据时必须如何仔细考虑这些影响。
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引用次数: 1
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Journal of Physics Complexity
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