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hPSC-derived Midbrain Dopaminergic Neurons Generated in a Scalable 3-D Biomaterial 在可扩展的三维生物材料中生成hpsc衍生的中脑多巴胺能神经元
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-28 DOI: 10.1002/cpsc.47
Maroof M. Adil, David V. Schaffer

Human pluripotent stem cell (hPSC)–derived midbrain dopaminergic (mDA) neurons may facilitate the development of therapies for Parkinson's disease via disease modeling, drug screening, and cell replacement therapy. However, large numbers of cells are typically needed for these applications, and 2-D culture–based approaches typically used for mDA differentiation are difficult to scale up and require a long time for mDA maturation. Here we present a protocol to rapidly generate functional mDA neurons in a fully defined, scalable, thermoresponsive 3-D biomaterial. Resource-efficient and accelerated differentiation of large numbers of mDA neurons may thus facilitate studying and treating PD. © 2018 by John Wiley & Sons, Inc.

人类多能干细胞(hPSC)衍生的中脑多巴胺能(mDA)神经元可能通过疾病建模、药物筛选和细胞替代疗法促进帕金森病治疗的发展。然而,这些应用通常需要大量的细胞,并且通常用于mDA分化的基于二维培养的方法难以扩大规模,并且需要很长时间才能使mDA成熟。在这里,我们提出了一种方案,快速生成功能mDA神经元在一个完全定义的,可扩展的,热响应的三维生物材料。大量mDA神经元的资源高效和加速分化可能有助于PD的研究和治疗。©2018 by John Wiley &儿子,Inc。
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引用次数: 4
CRISPR-Cas9-Based Genome Editing of Human Induced Pluripotent Stem Cells 基于crispr - cas9的人诱导多能干细胞基因组编辑
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-28 DOI: 10.1002/cpsc.46
Joseph C. Giacalone, Tasneem P. Sharma, Erin R. Burnight, John F. Fingert, Robert F. Mullins, Edwin M. Stone, Budd A. Tucker

Human induced pluripotent stem cells (hiPSCs) are the ideal cell source for autologous cell replacement. However, for patients with Mendelian diseases, genetic correction of the original disease-causing mutation is likely required prior to cellular differentiation and transplantation. The emergence of the CRISPR-Cas9 system has revolutionized the field of genome editing. By introducing inexpensive reagents that are relatively straightforward to design and validate, it is now possible to correct genetic variants or insert desired sequences at any location within the genome. CRISPR-based genome editing of patient-specific iPSCs shows great promise for future autologous cell replacement therapies. One caveat, however, is that hiPSCs are notoriously difficult to transfect, and optimized experimental design considerations are often necessary. This unit describes design strategies and methods for efficient CRISPR-based genome editing of patient- specific iPSCs. Additionally, it details a flexible approach that utilizes positive selection to generate clones with a desired genomic modification, Cre-lox recombination to remove the integrated selection cassette, and negative selection to eliminate residual hiPSCs with intact selection cassettes. © 2018 by John Wiley & Sons, Inc.

人诱导多能干细胞(hiPSCs)是自体细胞替代的理想细胞来源。然而,对于孟德尔疾病患者,在细胞分化和移植之前,可能需要对原始致病突变进行基因校正。CRISPR-Cas9系统的出现彻底改变了基因组编辑领域。通过引入设计和验证相对简单的廉价试剂,现在有可能纠正遗传变异或在基因组内的任何位置插入所需的序列。基于crispr的患者特异性iPSCs基因组编辑显示出未来自体细胞替代疗法的巨大前景。然而,需要注意的是,hipsc是出了名的难以转染的,优化的实验设计考虑通常是必要的。本单元描述了高效的基于crispr的患者特异性iPSCs基因组编辑的设计策略和方法。此外,它还详细介绍了一种灵活的方法,利用正选择生成具有所需基因组修饰的克隆,Cre-lox重组去除集成选择盒,负选择去除完整选择盒中残留的hipsc。©2018 by John Wiley &儿子,Inc。
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引用次数: 24
Direct Conversion of Human Pluripotent Stem Cells to Osteoblasts With a Small Molecule 用小分子直接转化人多能干细胞为成骨细胞
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-28 DOI: 10.1002/cpsc.44
Heemin Kang, Yu-Ru V. Shih, Shyni Varghese

Human pluripotent stem cells (hPSCs), which exhibit unlimited self-renewal ability and can differentiate into all cell types in the human body, are a promising cell source for cell-based therapies and regenerative medicine. Small molecules hold great potential in the derivation of tissue-specific cells from hPSCs owing to their cost-effectiveness and scalability. Here, we describe a protocol for deriving osteoblasts from hPSCs by using a single, natural small molecule: adenosine. This simple and effective experimental protocol allows one to obtain large numbers of osteoblasts or osteoprogenitor cells, with the ability to form functional bone tissues, from hPSCs, including human embryonic stem cells and induced pluripotent stem cells. This protocol could potentially enable studies of tissue regeneration and skeletal diseases. © 2018 by John Wiley & Sons, Inc.

人类多能干细胞(hPSCs)具有无限的自我更新能力,可以分化为人体所有类型的细胞,是细胞治疗和再生医学中很有前途的细胞来源。由于其成本效益和可扩展性,小分子在从hPSCs衍生组织特异性细胞方面具有巨大的潜力。在这里,我们描述了一种通过使用单一的天然小分子:腺苷从人造血干细胞中提取成骨细胞的方案。这种简单而有效的实验方案允许人们从人胚胎干细胞和诱导多能干细胞中获得大量具有形成功能骨组织能力的成骨细胞或骨祖细胞。该方案有可能使组织再生和骨骼疾病的研究成为可能。©2018 by John Wiley &儿子,Inc。
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引用次数: 12
Controlling the Effective Oxygen Tension Experienced by Cells Using a Dynamic Culture Technique for Hematopoietic Ex Vivo Expansion 利用动态培养技术控制造血体外扩增细胞的有效氧张力
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-28 DOI: 10.1002/cpsc.42
Abhilasha Tiwari, Cynthia S. Wong, Lakshmi P. Nekkanti, James A. Deane, Courtney McDonald, Jingang Li, Yen Pham, Amy E. Sutherland, Graham Jenkin, Mark A. Kirkland

Clinical hematopoietic stem/progenitor cell (HSPC) transplantation outcomes are strongly correlated with the number of cells infused. Hence, to generate sufficient HSPCs for transplantation, the best culture parameters for expansion are critical. It is generally assumed that the defined oxygen (O2) set for the incubator reflects the pericellular O2 to which cells are being exposed. Studies have shown that low O2 tension maintains an undifferentiated state, but the expansion rate may be constrained because of limited diffusion in a static culture system. A combination of low ambient O2 and dynamic culture conditions has been developed to increase the reconstituting capacity of human HSPCs. In this unit, the protocols for serum-free expansion of HSPCs at 5% and 20% O2 in static and dynamic nutrient flow mode are described. Finally, the impact of O2 tension on HSPC expansion in vitro by flow cytometry and colony forming assays and in vivo through engraftment using a murine model is assessed. © 2018 by John Wiley & Sons, Inc.

临床造血干细胞/祖细胞(HSPC)移植的结果与输注的细胞数量密切相关。因此,为了产生足够的HSPCs用于移植,最佳的培养参数至关重要。一般认为,为培养箱设定的限定氧(O2)反映了细胞所暴露的细胞周氧。研究表明,低氧张力维持未分化状态,但在静态培养系统中,由于扩散有限,膨胀速率可能受到限制。低氧环境和动态培养条件的结合已被开发出来,以增加人造血干细胞的重建能力。在本单元中,描述了在静态和动态营养流动模式下,在5%和20% O2下无血清扩增HSPCs的方案。最后,通过流式细胞术和集落形成实验评估O2张力对体外HSPC扩增的影响,并通过小鼠模型植入体内评估O2张力对HSPC扩增的影响。©2018 by John Wiley &儿子,Inc。
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引用次数: 2
Isolation of Human Melanoma Stem Cells Using ALDH as a Marker 用ALDH作为标记分离人黑色素瘤干细胞
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-16 DOI: 10.1002/9780470151808.sc0308s26
Yuchun Luo, Nicholas Nguyen, Mayumi Fujita

This unit describes a protocol for establishing a patient-derived tumor xenograft model (PDTX model) of human melanoma and isolating human melanoma stem cells from human melanoma specimens using aldehyde dehydrogenase (ALDH) as a marker. One major limitation of analyzing a small fraction of cancer stem cells from patient tumor samples is that substantial quantities of fresh tumor tissues are not available. To overcome this challenge, we have established a PDTX model of human melanoma. In this model, human tumor tissues obtained from melanoma patients are dissected into small pieces and subsequently implanted into immunocompromised mice. The PDTX tumors retain fundamental genotypic and phenotypic features of the original tumors and are suitable for further biological analyses. Using the PDTX model, we have analyzed ALDH-labeled human melanoma stem cells. This unit will describe how to establish a PDTX model using human tumor samples. We will also describe how to isolate and analyze ALDH-labeled human melanoma stem cells using this model. Curr. Protoc. Stem Cell Biol. 26:3.8.1-3.8.10. © 2013 by John Wiley & Sons, Inc.

本单元描述了一种建立人黑色素瘤患者源性肿瘤异种移植模型(PDTX模型)的方案,并使用醛脱氢酶(ALDH)作为标记从人黑色素瘤标本中分离人黑色素瘤干细胞。从患者肿瘤样本中分析一小部分癌症干细胞的一个主要限制是无法获得大量的新鲜肿瘤组织。为了克服这一挑战,我们建立了人类黑色素瘤的PDTX模型。在这个模型中,从黑色素瘤患者身上获得的人类肿瘤组织被解剖成小块,随后植入免疫功能低下的小鼠体内。PDTX肿瘤保留了原始肿瘤的基本基因型和表型特征,适合进一步的生物学分析。使用PDTX模型,我们分析了aldh标记的人类黑色素瘤干细胞。本单元将描述如何使用人类肿瘤样本建立PDTX模型。我们还将描述如何使用该模型分离和分析aldh标记的人类黑色素瘤干细胞。咕咕叫。Protoc。干细胞生物学。26:3.8.1-3.8.10。©2013 by John Wiley &儿子,Inc。
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引用次数: 22
Array-Based High-Throughput Screening in Mouse Embryonic Stem Cells with shRNAs 基于阵列的shrna小鼠胚胎干细胞高通量筛选
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-16 DOI: 10.1002/9780470151808.sc05c03s26
Chia-Hui Wang, Nianhan Ma, Yu-Tsen Lin, Cheng-Chung Wu, Hong-Jin Wu, Ching-Chia Yu, Michael Hsiao, Frank Leigh Lu, Scott C. Schuyler, Jean Lu

High-throughput short-hairpin RNA (shRNA) lentivirus screening is a powerful tool for identifying multiple functional regulators in embryonic stem cells (ESCs). shRNA libraries can efficiently down-regulate target genes persistently with high efficiency. The concurrent measurement of relative cell number by alamarBlue (AB) assay and undifferentiated ESC markers via an alkaline phosphatase (ALP) activity assay in the same cell culture well provides an efficient and economical way to pinpoint factors crucial for ESC pluripotency and/or expansion. Most of the renewal pathways affect ALP activity. Thus, multiple positive and negative regulators can be identified by this method. In addition, morphological changes and/or the expression levels of specific pluripotency or differentiation markers examined by immunofluorescence can be used as secondary screens for target-gene selection. In summary, we describe an efficient way to identify multiple regulators of ESC renewal using shRNAs. Curr. Protoc. Stem Cell Biol. 26:5C.3.1-5C.3.19. © 2013 by John Wiley & Sons, Inc.

高通量短发夹RNA (shRNA)慢病毒筛选是鉴定胚胎干细胞(ESCs)中多种功能调节因子的有力工具。shRNA文库能够高效、持续地下调靶基因。通过alamarBlue (AB)测定和碱性磷酸酶(ALP)活性测定,在同一细胞培养中同时测定相对细胞数量,为确定ESC多能性和/或扩增的关键因素提供了一种有效而经济的方法。大多数更新途径影响ALP活性。因此,通过这种方法可以识别多个正、负调节器。此外,免疫荧光检测的形态学变化和/或特异性多能性或分化标志物的表达水平可作为靶基因选择的二级筛选。总之,我们描述了一种利用shrna识别ESC更新的多个调节因子的有效方法。咕咕叫。Protoc。干细胞生物学。26:5 . c .3.1- c .3.19。©2013 by John Wiley &儿子,Inc。
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引用次数: 1
Transplantation Models to Characterize the Mechanisms of Stem Cell–Induced Islet Regeneration 移植模型表征干细胞诱导的胰岛再生机制
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-16 DOI: 10.1002/9780470151808.sc02b04s26
Gillian I. Bell, Ayesh K. Seneviratne, Grace N. Nasri, David A. Hess

This unit describes our current knowledge regarding the isolation human bone marrow–derived progenitor cells for the paracrine stimulation of islet regeneration after transplantation into immunodeficient mouse models of diabetes. By using high aldehyde dehydrogenase (ALDHhi) activity, a conserved function in multiple stem cell lineages, a mixed population of hematopoietic, endothelial, and mesenchymal progenitor cells can be efficiently purified using flow cytometry. We describe in vitro approaches to characterize and expand these distinct cell types. Importantly, these cell types can be transplanted into immunodeficient mice rendered beta-cell deficient by streptozotocin (STZ) treatment, in order monitor functional recovery from hyperglycemia and to characterize endogenous islet regeneration via paracrine mechanisms. Herein, we provide detailed protocols for: (1) isolation and characterization of ALDHhi cells for the establishment of hematopoietic and multipotent-stromal progenitor lineages; (2) intravenous and intrapancreatic transplantation of human stem cell subtypes for the quantification of glycemic recovery in STZ-treated immunodeficient mice; and (3) immunohistochemical characterization of islet recovery via the stimulation of islet neogenic, beta-cell proliferative, and islet revascularization programs. Collectively, these systems can be used to support the pre-clinical development of human progenitor cell–based therapies to treat diabetes via islet regeneration. Curr. Protoc. Stem Cell Biol. 26:2B.4.1-2B.4.35. © 2013 by John Wiley & Sons, Inc.

本单元描述了我们目前关于分离人骨髓来源的祖细胞用于胰岛再生的旁分泌刺激移植到免疫缺陷的糖尿病小鼠模型的知识。利用高醛脱氢酶(ALDHhi)活性,一种多种干细胞谱系中的保守功能,流式细胞术可以有效地纯化造血、内皮和间充质祖细胞的混合群体。我们描述了体外方法来表征和扩展这些不同的细胞类型。重要的是,这些细胞类型可以移植到通过链脲佐菌素(STZ)治疗导致β细胞缺陷的免疫缺陷小鼠中,以监测高血糖后的功能恢复,并通过旁分泌机制表征内源性胰岛再生。在此,我们提供了详细的方案:(1)ALDHhi细胞的分离和表征,以建立造血和多能基质祖细胞谱系;(2)静脉和胰腺内移植人干细胞亚型,定量测定stz治疗免疫缺陷小鼠的血糖恢复情况;(3)通过刺激胰岛新生、β细胞增殖和胰岛血运重建计划来描述胰岛恢复的免疫组织化学特征。总的来说,这些系统可用于支持基于人类祖细胞的疗法的临床前开发,通过胰岛再生治疗糖尿病。咕咕叫。Protoc。干细胞生物学。26:2 . b .4.1- b .4.35。©2013 by John Wiley &儿子,Inc。
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引用次数: 4
Intraspinal Transplantation of Mouse and Human Neural Precursor Cells 小鼠和人神经前体细胞的椎管内移植
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-16 DOI: 10.1002/9780470151808.sc02d16s26
Jason G. Weinger, Lu Chen, Ronald Coleman, Ronika Leang, Warren C. Plaisted, Jeanne F. Loring, Thomas E. Lane

This unit describes the preparation and transplantation of human neural precursor cells (hNPCs) and mouse neural precursor cells (mNPCs) into the thoracic region of the mouse spinal cord. The techniques in this unit also describe how to prepare the mouse for surgery by performing a laminectomy to expose the spinal cord for transplantation. NPCs genetically labeled with eGFP transplanted into the spinal cord of a mouse following viral-mediated demyelination can efficiently be detected via eGFP expression. Transplantation of these cells into the spinal cord is an efficacious way to determine their effects in neurological disorders such as multiple sclerosis, Alzheimer's disease, and spinal cord injury. Curr. Protoc. Stem Cell Biol. 26:2D.16.1-2D.16.16. © 2013 by John Wiley & Sons, Inc.

本单元描述了人神经前体细胞(hNPCs)和小鼠神经前体细胞(mNPCs)在小鼠脊髓胸椎区的制备和移植。本单元的技术还描述了如何通过椎板切除术暴露用于移植的脊髓来为手术小鼠做准备。基因标记有eGFP的npc在病毒介导脱髓鞘后移植到小鼠脊髓中,可以通过eGFP表达有效地检测。将这些细胞移植到脊髓中是一种有效的方法,可以确定它们对多发性硬化症、阿尔茨海默病和脊髓损伤等神经系统疾病的影响。咕咕叫。Protoc。干细胞生物学。26:2 .16.1-2 .16.16。©2013 by John Wiley &儿子,Inc。
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引用次数: 5
Differentiation of Hepatocytes from Pluripotent Stem Cells 多能干细胞与肝细胞的分化
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-16 DOI: 10.1002/9780470151808.sc01g04s26
Sunil K. Mallanna, Stephen A. Duncan

Differentiation of human embryonic stem (ES) and induced pluripotent stem (iPS) cells into hepatocyte-like cells provides a platform to study the molecular basis of human hepatocyte differentiation, to develop cell culture models of liver disease, and to potentially provide hepatocytes for treatment of end-stage liver disease. Additionally, hepatocyte-like cells generated from human pluripotent stem cells could serve as platforms for drug discovery, determination of pharmaceutical-induced hepatotoxicity, and evaluation of idiosyncratic drug-drug interactions. Here, we describe a step-wise protocol previously developed in our laboratory that facilitates the highly efficient and reproducible differentiation of human pluripotent stem cells into hepatocyte-like cells. Our protocol uses defined culture conditions and closely recapitulates key developmental events that are found to occur during hepatogenesis. Curr. Protoc. Stem Cell Biol. 26:1G.4.1-1G.4.13. © 2013 by John Wiley & Sons, Inc.

人胚胎干细胞(ES)和诱导多能干细胞(iPS)分化为肝细胞样细胞,为研究人肝细胞分化的分子基础、建立肝脏疾病的细胞培养模型,以及为治疗终末期肝脏疾病提供肝细胞提供潜在的平台。此外,由人类多能干细胞产生的肝细胞样细胞可以作为药物发现、药物诱导肝毒性测定和特殊药物-药物相互作用评估的平台。在这里,我们描述了先前在我们实验室开发的一种分步方案,该方案促进了人类多能干细胞向肝细胞样细胞的高效和可重复分化。我们的方案使用确定的培养条件,并密切概括在肝发生过程中发现的关键发育事件。咕咕叫。Protoc。干细胞生物学。26:1 .4.1-1 .4.13。©2013 by John Wiley &儿子,Inc。
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引用次数: 96
Single-Cell Functional Analysis of Stem-Cell Derived Cardiomyocytes on Micropatterned Flexible Substrates 微图案柔性基质上干细胞衍生心肌细胞的单细胞功能分析
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-13 DOI: 10.1002/cpsc.40
Jan David Kijlstra, Dongjian Hu, Peter van der Meer, Ibrahim J. Domian

Human pluripotent stem–cell derived cardiomyocytes (hPSC-CMs) hold great promise for applications in human disease modeling, drug discovery, cardiotoxicity screening, and, ultimately, regenerative medicine. The ability to study multiple parameters of hPSC-CM function, such as contractile and electrical activity, calcium cycling, and force generation, is therefore of paramount importance. hPSC-CMs cultured on stiff substrates like glass or polystyrene do not have the ability to shorten during contraction, making them less suitable for the study of hPSC-CM contractile function. Other approaches require highly specialized hardware and are difficult to reproduce. Here we describe a protocol for the preparation of hPSC-CMs on soft substrates that enable shortening, and subsequently the simultaneous quantitative analysis of their contractile and electrical activity, calcium cycling, and force generation at single-cell resolution. This protocol requires only affordable and readily available materials and works with standard imaging hardware. © 2017 by John Wiley & Sons, Inc.

人类多能干细胞来源的心肌细胞(hPSC-CMs)在人类疾病建模、药物发现、心脏毒性筛选以及最终的再生医学方面有着巨大的应用前景。因此,研究hPSC-CM功能的多个参数,如收缩和电活动、钙循环和力产生的能力是至关重要的。在玻璃或聚苯乙烯等坚硬基质上培养的hspc - cm在收缩过程中不具有缩短的能力,因此不太适合研究hspc - cm的收缩功能。其他方法需要高度专业化的硬件,而且很难复制。在这里,我们描述了一种在软底物上制备hPSC-CMs的方案,该方案可以缩短,随后在单细胞分辨率下同时定量分析其收缩和电活动,钙循环和力产生。该协议只需要负担得起且容易获得的材料,并与标准成像硬件一起工作。©2017 by John Wiley &儿子,Inc。
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引用次数: 5
期刊
Current Protocols in Stem Cell Biology
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