首页 > 最新文献

Annual Review of Cancer Biology-Series最新文献

英文 中文
The Effects of Clonal Heterogeneity on Cancer Immunosurveillance 克隆异质性对肿瘤免疫监测的影响
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-17 DOI: 10.1146/annurev-cancerbio-061521-101910
K. Dijkstra, Yin Wu, C. Swanton
Intratumor heterogeneity (ITH) is associated with tumor progression in several clinical and experimental settings and contributes to therapeutic resistance. Its relation to cancer immunosurveillance is complex. Clonally heterogeneous tumors are associated with decreased immunosurveillance and are less responsive to immune checkpoint inhibition, but the mechanistic basis underlying these observations remains unclear. One possibility is that tumors that are under active immunosurveillance are relatively homogeneous because immunosurveillance prevents the outgrowth of immunogenic subclones. Alternatively, high ITH might directly impair immunosurveillance due to lower dosages of subclonal antigens, competition between antigens and immunodominance, the induction of detrimental T cell differentiation programs, or negative feedback loops. Here we review the evidence for these scenarios and outline hypotheses that could underlie the negative association between clonal heterogeneity and cancer immunosurveillance. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
在一些临床和实验环境中,瘤内异质性(ITH)与肿瘤进展有关,并导致治疗耐药性。它与癌症免疫监测的关系是复杂的。克隆异质性肿瘤与免疫监测减少有关,对免疫检查点抑制反应较低,但这些观察结果的机制基础尚不清楚。一种可能性是,处于主动免疫监测下的肿瘤相对同质,因为免疫监测可以防止免疫原性亚克隆的生长。或者,由于亚克隆抗原的低剂量、抗原和免疫优势之间的竞争、有害T细胞分化程序的诱导或负反馈回路,高ITH可能直接损害免疫监测。在此,我们回顾了这些情况的证据,并概述了克隆异质性与癌症免疫监测之间负相关的假设。《癌症生物学年度评论》第7卷预计最终在线出版日期为2023年4月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
{"title":"The Effects of Clonal Heterogeneity on Cancer Immunosurveillance","authors":"K. Dijkstra, Yin Wu, C. Swanton","doi":"10.1146/annurev-cancerbio-061521-101910","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061521-101910","url":null,"abstract":"Intratumor heterogeneity (ITH) is associated with tumor progression in several clinical and experimental settings and contributes to therapeutic resistance. Its relation to cancer immunosurveillance is complex. Clonally heterogeneous tumors are associated with decreased immunosurveillance and are less responsive to immune checkpoint inhibition, but the mechanistic basis underlying these observations remains unclear. One possibility is that tumors that are under active immunosurveillance are relatively homogeneous because immunosurveillance prevents the outgrowth of immunogenic subclones. Alternatively, high ITH might directly impair immunosurveillance due to lower dosages of subclonal antigens, competition between antigens and immunodominance, the induction of detrimental T cell differentiation programs, or negative feedback loops. Here we review the evidence for these scenarios and outline hypotheses that could underlie the negative association between clonal heterogeneity and cancer immunosurveillance. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2023-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42485615","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Cancer-Associated Fibroblasts: Lessons from Pancreatic Cancer 癌症相关成纤维细胞:从癌症中吸取的教训
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-17 DOI: 10.1146/annurev-cancerbio-061421-035400
M. Sherman, M. Pasca di Magliano
Cancer-associated fibroblasts (CAFs) are present in all malignancies. Arguably, in none are they as prevalent as they are in pancreatic ductal adenocarcinoma (PDAC), where they often outnumber cancer cells. The origin and function of CAFs are still not completely understood, and attempts to target this cell population as a component of combination therapy have so far not succeeded. Our understanding of pancreatic CAFs is in rapid evolution. Heterogeneity of CAFs is the key concept to understand this cell population. We discuss heterogeneity of origin, with recent findings challenging the notion that CAFs uniformly derive from pancreatic stellate cells, and instead suggesting that multiple types of resident fibroblasts contribute to CAF expansion. Heterogeneity in gene expression divides CAFs in different subpopulations. Most importantly, heterogeneity in function underlies the complexity of CAFs. CAFs deposit components of the extracellular matrix, contributing to the high interstitial pressure in pancreatic cancer. CAFs serve as “feeder” cells for cancer cells by providing metabolites, thus mitigating the effect of the low-nutrient environment of PDAC. At the same time, CAFs regulate the function of the immune system, inhibiting antitumor immune responses. Understanding the functional role of different CAF populations and the drivers of each of their functional roles is key to devising new ways to target this cell population in PDAC. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
癌相关成纤维细胞(CAFs)存在于所有恶性肿瘤中。可以说,它们在任何一种情况下都不像在胰腺导管腺癌(PDAC)中那样普遍,在PDAC中,它们的数量通常超过癌症细胞。CAFs的起源和功能尚不完全清楚,将该细胞群作为联合治疗的一个组成部分的尝试迄今尚未成功。我们对胰腺CAFs的理解正在迅速发展。CAFs的异质性是理解这种细胞群体的关键概念。我们讨论了起源的异质性,最近的研究结果挑战了CAF均匀来源于胰腺星状细胞的观点,并表明多种类型的固有成纤维细胞有助于CAF的扩增。基因表达的异质性将CAFs分为不同的亚群。最重要的是,功能的异质性是CAFs复杂性的基础。CAFs沉积细胞外基质成分,导致癌症胰腺间质高压。CAFs通过提供代谢物作为癌症细胞的“饲养”细胞,从而减轻PDAC低营养环境的影响。同时,CAFs调节免疫系统的功能,抑制抗肿瘤免疫反应。了解不同CAF群体的功能作用及其每种功能作用的驱动因素是设计PDAC中靶向该细胞群体的新方法的关键。《癌症生物学年度评论》第7卷预计最终在线出版日期为2023年4月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
{"title":"Cancer-Associated Fibroblasts: Lessons from Pancreatic Cancer","authors":"M. Sherman, M. Pasca di Magliano","doi":"10.1146/annurev-cancerbio-061421-035400","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061421-035400","url":null,"abstract":"Cancer-associated fibroblasts (CAFs) are present in all malignancies. Arguably, in none are they as prevalent as they are in pancreatic ductal adenocarcinoma (PDAC), where they often outnumber cancer cells. The origin and function of CAFs are still not completely understood, and attempts to target this cell population as a component of combination therapy have so far not succeeded. Our understanding of pancreatic CAFs is in rapid evolution. Heterogeneity of CAFs is the key concept to understand this cell population. We discuss heterogeneity of origin, with recent findings challenging the notion that CAFs uniformly derive from pancreatic stellate cells, and instead suggesting that multiple types of resident fibroblasts contribute to CAF expansion. Heterogeneity in gene expression divides CAFs in different subpopulations. Most importantly, heterogeneity in function underlies the complexity of CAFs. CAFs deposit components of the extracellular matrix, contributing to the high interstitial pressure in pancreatic cancer. CAFs serve as “feeder” cells for cancer cells by providing metabolites, thus mitigating the effect of the low-nutrient environment of PDAC. At the same time, CAFs regulate the function of the immune system, inhibiting antitumor immune responses. Understanding the functional role of different CAF populations and the drivers of each of their functional roles is key to devising new ways to target this cell population in PDAC. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2023-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48693509","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
The Potent and Paradoxical Biology of Cellular Senescence in Cancer 癌症细胞衰老的有效性和悖论生物学
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-17 DOI: 10.1146/annurev-cancerbio-061421-124434
P. Romesser, S. Lowe
Cellular senescence is a tumor-suppressive program that promotes tissue homeostasis by identifying damaged cells for immune-mediated clearance. Thus, the ability to evade senescence and the ensuing immune surveillance is a hallmark of cancer. Reactivation of senescence programs can result in profound immune-mediated tumor regressions or sensitize tumors to immunotherapy, although the aberrant persistence of senescent cells can promote tissue decline and contribute to the side effects of some cancer therapies. In this review, we first briefly describe the discovery of senescence as a tumor-suppressive program. Next, we highlight the dueling good and bad effects of the senescence-associated secretory program (SASP) in cancer, including SASP-dependent immune effects. We then summarize the beneficial and deleterious effects of senescence induction by cancer therapies and strategies in development to leverage senescence therapeutically. Finally, we highlight challenges and unmet needs in understanding senescence in cancer and developing senescence-modulating therapies. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
细胞衰老是一种肿瘤抑制程序,通过识别受损细胞进行免疫介导的清除来促进组织稳态。因此,逃避衰老和随后的免疫监视的能力是癌症的一个标志。衰老程序的重新激活可以导致免疫介导的肿瘤退化或使肿瘤对免疫治疗敏感,尽管衰老细胞的异常持续可以促进组织衰退并导致某些癌症治疗的副作用。在这篇综述中,我们首先简要地描述衰老作为肿瘤抑制程序的发现。接下来,我们强调衰老相关分泌程序(SASP)在癌症中的利弊,包括SASP依赖的免疫作用。然后,我们总结了癌症治疗诱导衰老的有益和有害影响,以及利用衰老治疗的发展策略。最后,我们强调了在了解癌症衰老和开发衰老调节疗法方面的挑战和未满足的需求。预计《癌症生物学年度评论》第七卷的最终在线出版日期是2023年4月。修订后的估计数请参阅http://www.annualreviews.org/page/journal/pubdates。
{"title":"The Potent and Paradoxical Biology of Cellular Senescence in Cancer","authors":"P. Romesser, S. Lowe","doi":"10.1146/annurev-cancerbio-061421-124434","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061421-124434","url":null,"abstract":"Cellular senescence is a tumor-suppressive program that promotes tissue homeostasis by identifying damaged cells for immune-mediated clearance. Thus, the ability to evade senescence and the ensuing immune surveillance is a hallmark of cancer. Reactivation of senescence programs can result in profound immune-mediated tumor regressions or sensitize tumors to immunotherapy, although the aberrant persistence of senescent cells can promote tissue decline and contribute to the side effects of some cancer therapies. In this review, we first briefly describe the discovery of senescence as a tumor-suppressive program. Next, we highlight the dueling good and bad effects of the senescence-associated secretory program (SASP) in cancer, including SASP-dependent immune effects. We then summarize the beneficial and deleterious effects of senescence induction by cancer therapies and strategies in development to leverage senescence therapeutically. Finally, we highlight challenges and unmet needs in understanding senescence in cancer and developing senescence-modulating therapies. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2023-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47803622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
AI in Computational Pathology of Cancer: Improving Diagnostic Workflows and Clinical Outcomes? 人工智能在癌症计算病理学中的应用:改善诊断工作流程和临床结果?
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-17 DOI: 10.1146/annurev-cancerbio-061521-092038
D. Cifci, G. P. Veldhuizen, S. Foersch, Jakob Nikolas Kather
Histopathology plays a fundamental role in the diagnosis and subtyping of solid tumors and has become a cornerstone of modern precision oncology. Histopathological evaluation is typically performed manually by expert pathologists due to the complexity of visual data. However, in the last ten years, new artificial intelligence (AI) methods have made it possible to train computers to perform visual tasks with high performance, reaching similar levels as experts in some applications. In cancer histopathology, these AI tools could help automate repetitive tasks, making more efficient use of pathologists’ time. In research studies, AI methods have been shown to have an astounding ability to predict genetic alterations and identify prognostic and predictive biomarkers directly from routine tissue slides. Here, we give an overview of these recent applications of AI in computational pathology, focusing on new tools for cancer research that could be pivotal in identifying clinical biomarkers for better treatment decisions. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
组织病理学在实体瘤的诊断和分型中起着重要作用,已成为现代精确肿瘤学的基石。由于视觉数据的复杂性,组织病理学评估通常由专业病理学家手动进行。然而,在过去的十年里,新的人工智能(AI)方法使训练计算机执行高性能视觉任务成为可能,在某些应用中达到了与专家相似的水平。在癌症组织病理学中,这些人工智能工具可以帮助自动化重复任务,更有效地利用病理学家的时间。在研究中,人工智能方法已被证明具有惊人的能力,可以直接从常规组织切片中预测基因改变并识别预后和预测性生物标志物。在这里,我们概述了人工智能在计算病理学中的这些最新应用,重点关注癌症研究的新工具,这些工具可能在识别临床生物标志物以做出更好的治疗决策方面发挥关键作用。《癌症生物学年度评论》第7卷预计最终在线出版日期为2023年4月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
{"title":"AI in Computational Pathology of Cancer: Improving Diagnostic Workflows and Clinical Outcomes?","authors":"D. Cifci, G. P. Veldhuizen, S. Foersch, Jakob Nikolas Kather","doi":"10.1146/annurev-cancerbio-061521-092038","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061521-092038","url":null,"abstract":"Histopathology plays a fundamental role in the diagnosis and subtyping of solid tumors and has become a cornerstone of modern precision oncology. Histopathological evaluation is typically performed manually by expert pathologists due to the complexity of visual data. However, in the last ten years, new artificial intelligence (AI) methods have made it possible to train computers to perform visual tasks with high performance, reaching similar levels as experts in some applications. In cancer histopathology, these AI tools could help automate repetitive tasks, making more efficient use of pathologists’ time. In research studies, AI methods have been shown to have an astounding ability to predict genetic alterations and identify prognostic and predictive biomarkers directly from routine tissue slides. Here, we give an overview of these recent applications of AI in computational pathology, focusing on new tools for cancer research that could be pivotal in identifying clinical biomarkers for better treatment decisions. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2023-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44789886","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
The Role of Phase-Separated Condensates in Fusion Oncoprotein–Driven Cancers 相分离凝聚物在融合癌蛋白驱动的癌症中的作用
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-13 DOI: 10.1146/annurev-cancerbio-061421-122050
Hazheen K. Shirnekhi, Bappaditya Chandra, R. Kriwacki
Fusion oncoproteins (FOs) resulting from in-frame chromosomal translocations are associated with many aggressive cancers with poor patient outcomes. Several FOs are now understood to perform their oncogenic functions within biomolecular condensates formed through liquid-liquid phase separation (LLPS). Two classes of phase-separating FOs have emerged, those that form nuclear condensates and alter chromatin biology, including gene expression, and those that form cytoplasmic condensates and promote aberrant signaling, including RAS/MAPK signaling. The amino acid sequences of the FOs within these classes display LLPS-prone intrinsically disordered regions and folded domains that synergistically interact with themselves and other biomolecules to promote condensate formation. This review summarizes the roles of LLPS in the oncogenic functions of these two FO classes, provides examples of FOs that inhibit physiological LLPS in normal cells, and discusses the sequence features commonly associated with LLPS and their enrichment in many FOs. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
框架内染色体易位引起的融合癌蛋白(FOs)与许多具有不良预后的侵袭性癌症有关。几种FOs现在被理解为在通过液-液相分离(LLPS)形成的生物分子凝聚物中发挥其致癌功能。目前已经出现了两类相分离的FOs,一类形成核凝聚体并改变染色质生物学,包括基因表达,另一类形成细胞质凝聚体并促进异常信号传导,包括RAS/MAPK信号传导。这些类别中的FOs的氨基酸序列显示llps倾向的内在无序区域和折叠区域,这些区域与它们自身和其他生物分子协同作用以促进凝聚物的形成。本文综述了LLPS在这两类FO的致癌功能中的作用,提供了在正常细胞中抑制生理性LLPS的FO的例子,并讨论了与LLPS相关的序列特征及其在许多FO中的富集。预计《癌症生物学年度评论》第七卷的最终在线出版日期是2023年4月。修订后的估计数请参阅http://www.annualreviews.org/page/journal/pubdates。
{"title":"The Role of Phase-Separated Condensates in Fusion Oncoprotein–Driven Cancers","authors":"Hazheen K. Shirnekhi, Bappaditya Chandra, R. Kriwacki","doi":"10.1146/annurev-cancerbio-061421-122050","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061421-122050","url":null,"abstract":"Fusion oncoproteins (FOs) resulting from in-frame chromosomal translocations are associated with many aggressive cancers with poor patient outcomes. Several FOs are now understood to perform their oncogenic functions within biomolecular condensates formed through liquid-liquid phase separation (LLPS). Two classes of phase-separating FOs have emerged, those that form nuclear condensates and alter chromatin biology, including gene expression, and those that form cytoplasmic condensates and promote aberrant signaling, including RAS/MAPK signaling. The amino acid sequences of the FOs within these classes display LLPS-prone intrinsically disordered regions and folded domains that synergistically interact with themselves and other biomolecules to promote condensate formation. This review summarizes the roles of LLPS in the oncogenic functions of these two FO classes, provides examples of FOs that inhibit physiological LLPS in normal cells, and discusses the sequence features commonly associated with LLPS and their enrichment in many FOs. Expected final online publication date for the Annual Review of Cancer Biology, Volume 7 is April 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2023-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47676186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Targeting Driver Oncogenes and Other Public Neoantigens Using T Cell Receptor-Based Cellular Therapy. 利用基于T细胞受体的细胞治疗靶向驱动癌基因和其他公共新抗原。
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2023-01-01 DOI: 10.1146/annurev-cancerbio-061521-082114
Tijana Martinov, Philip D Greenberg

T cell reactivity to tumor-specific neoantigens can drive endogenous and therapeutically induced antitumor immunity. However, most tumor-specific neoantigens are unique to each patient (private) and targeting them requires personalized therapy. A smaller subset of neoantigens includes epitopes that span recurrent mutation hotspots, translocations, or gene fusions in oncogenic drivers and tumor suppressors, as well as epitopes that arise from viral oncogenic proteins. Such antigens are likely to be shared across patients (public), uniformly expressed within a tumor, and required for cancer cell survival and fitness. Although a limited number of these public neoantigens are naturally immunogenic, recent studies affirm their clinical utility. In this review, we highlight efforts to target mutant KRAS, mutant p53, and epitopes derived from oncogenic viruses using T cells engineered with off-the-shelf T cell receptors. We also discuss the challenges and strategies to achieving more effective T cell therapies, particularly in the context of solid tumors.

T细胞对肿瘤特异性新抗原的反应性可以驱动内源性和治疗性诱导的抗肿瘤免疫。然而,大多数肿瘤特异性新抗原对每个患者都是独特的(私人),针对它们需要个性化治疗。一个较小的新抗原子集包括跨越复发性突变热点、易位或致癌驱动因子和肿瘤抑制因子的基因融合的表位,以及来自病毒致癌蛋白的表位。这些抗原很可能在患者之间(公众)共享,在肿瘤内均匀表达,并且是癌细胞生存和健康所必需的。虽然有限数量的这些公共新抗原是天然免疫原性的,但最近的研究证实了它们的临床应用。在这篇综述中,我们重点介绍了利用现成的T细胞受体工程化的T细胞靶向KRAS突变体、p53突变体和来自致癌病毒的表位。我们还讨论了实现更有效的T细胞疗法的挑战和策略,特别是在实体瘤的背景下。
{"title":"Targeting Driver Oncogenes and Other Public Neoantigens Using T Cell Receptor-Based Cellular Therapy.","authors":"Tijana Martinov,&nbsp;Philip D Greenberg","doi":"10.1146/annurev-cancerbio-061521-082114","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-061521-082114","url":null,"abstract":"<p><p>T cell reactivity to tumor-specific neoantigens can drive endogenous and therapeutically induced antitumor immunity. However, most tumor-specific neoantigens are unique to each patient (private) and targeting them requires personalized therapy. A smaller subset of neoantigens includes epitopes that span recurrent mutation hotspots, translocations, or gene fusions in oncogenic drivers and tumor suppressors, as well as epitopes that arise from viral oncogenic proteins. Such antigens are likely to be shared across patients (public), uniformly expressed within a tumor, and required for cancer cell survival and fitness. Although a limited number of these public neoantigens are naturally immunogenic, recent studies affirm their clinical utility. In this review, we highlight efforts to target mutant KRAS, mutant p53, and epitopes derived from oncogenic viruses using T cells engineered with off-the-shelf T cell receptors. We also discuss the challenges and strategies to achieving more effective T cell therapies, particularly in the context of solid tumors.</p>","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":"7 1","pages":"331-351"},"PeriodicalIF":7.7,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10470615/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10150304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Development of Tissue-Agnostic Treatments for Patients with Cancer 癌症患者组织不可知治疗的进展
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2022-04-11 DOI: 10.1146/annurev-cancerbio-060921-021828
S. Lemery, L. Fashoyin-Aje, L. Marcus, S. Casak, Julie A. Schneider, M. Theoret, P. Kluetz, R. Pazdur, J. Beaver
In 2017 the FDA (US Food and Drug Administration) approved pembrolizumab, a programmed death 1 (PD-1) inhibitor, for the treatment of unresectable or metastatic, microsatellite instability–high (MSI-H) or mismatch repair–deficient (dMMR) solid tumors, regardless of tumor site or histology. This represented the first approval based on the identification of a biomarker and independent of tumor site. Although this approach may intuitively appear rational, tissue-agnostic drug development can be complicated by tumor-specific resistance mechanisms or other factors that can alter a drug's effect. Inherent with the tissue-agnostic approach is the fact that there may be residual uncertainty concerning a drug's effect in unstudied tumor types (e.g., at the time of approval). However, this approach may be the only available mechanism to support approval and provide access to a drug that is indicated for the treatment of patients with certain rare biomarker-positive cancers.
2017年,FDA(美国食品和药物管理局)批准pembrolizumab,一种程序性死亡1 (PD-1)抑制剂,用于治疗不可切除或转移性,微卫星不稳定性高(MSI-H)或错配修复缺陷(dMMR)实体瘤,无论肿瘤部位或组织学如何。这是第一个基于生物标志物的鉴定和独立于肿瘤部位的批准。尽管这种方法在直觉上似乎是合理的,但组织不可知的药物开发可能会因肿瘤特异性耐药机制或其他可能改变药物效果的因素而变得复杂。组织不可知方法固有的一个事实是,药物对未研究的肿瘤类型的作用可能存在剩余的不确定性(例如,在批准时)。然而,这种方法可能是唯一可用的机制,以支持批准和提供药物用于治疗某些罕见的生物标志物阳性癌症患者。
{"title":"Development of Tissue-Agnostic Treatments for Patients with Cancer","authors":"S. Lemery, L. Fashoyin-Aje, L. Marcus, S. Casak, Julie A. Schneider, M. Theoret, P. Kluetz, R. Pazdur, J. Beaver","doi":"10.1146/annurev-cancerbio-060921-021828","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-060921-021828","url":null,"abstract":"In 2017 the FDA (US Food and Drug Administration) approved pembrolizumab, a programmed death 1 (PD-1) inhibitor, for the treatment of unresectable or metastatic, microsatellite instability–high (MSI-H) or mismatch repair–deficient (dMMR) solid tumors, regardless of tumor site or histology. This represented the first approval based on the identification of a biomarker and independent of tumor site. Although this approach may intuitively appear rational, tissue-agnostic drug development can be complicated by tumor-specific resistance mechanisms or other factors that can alter a drug's effect. Inherent with the tissue-agnostic approach is the fact that there may be residual uncertainty concerning a drug's effect in unstudied tumor types (e.g., at the time of approval). However, this approach may be the only available mechanism to support approval and provide access to a drug that is indicated for the treatment of patients with certain rare biomarker-positive cancers.","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":" ","pages":""},"PeriodicalIF":7.7,"publicationDate":"2022-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46307494","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Novel Mouse Models for Cancer Immunology. 癌症免疫学的新型小鼠模型。
IF 4.7 2区 医学 Q1 ONCOLOGY Pub Date : 2022-04-01 Epub Date: 2022-01-18 DOI: 10.1146/annurev-cancerbio-070620-105523
Kelli A Connolly, Brittany Fitzgerald, Martina Damo, Nikhil S Joshi

Mouse models for the study of cancer immunology provide excellent systems in which to test biological mechanisms of the immune response against cancer. Historically, these models have been designed to have different strengths based on the current major research questions at the time. As such, many mouse models of immunology used today were not originally developed to study questions currently plaguing the relatively new field of cancer immunology, but instead have been adapted for such purposes. In this review, we discuss various mouse model of cancer immunology in a historical context as a means to provide a fuller perspective of each model's strengths. From this outlook, we discuss the current state of the art and strategies for tackling future modeling challenges.

研究癌症免疫学的小鼠模型为测试抗癌免疫反应的生物机制提供了绝佳的系统。从历史上看,这些模型是根据当时的主要研究问题设计的,具有不同的优势。因此,现在使用的许多免疫学小鼠模型最初并不是为了研究目前困扰相对较新的癌症免疫学领域的问题而开发的,而是为了这些目的而改造的。在本综述中,我们将结合历史背景讨论各种癌症免疫学小鼠模型,以便更全面地了解每种模型的优势。从这一前景出发,我们讨论了目前的技术水平和应对未来建模挑战的策略。
{"title":"Novel Mouse Models for Cancer Immunology.","authors":"Kelli A Connolly, Brittany Fitzgerald, Martina Damo, Nikhil S Joshi","doi":"10.1146/annurev-cancerbio-070620-105523","DOIUrl":"10.1146/annurev-cancerbio-070620-105523","url":null,"abstract":"<p><p>Mouse models for the study of cancer immunology provide excellent systems in which to test biological mechanisms of the immune response against cancer. Historically, these models have been designed to have different strengths based on the current major research questions at the time. As such, many mouse models of immunology used today were not originally developed to study questions currently plaguing the relatively new field of cancer immunology, but instead have been adapted for such purposes. In this review, we discuss various mouse model of cancer immunology in a historical context as a means to provide a fuller perspective of each model's strengths. From this outlook, we discuss the current state of the art and strategies for tackling future modeling challenges.</p>","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":"6 1","pages":"269-291"},"PeriodicalIF":4.7,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9979244/pdf/nihms-1873858.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9080836","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Oncohistones: Hijacking the histone code. 组蛋白:劫持组蛋白代码。
IF 7.7 2区 医学 Q1 ONCOLOGY Pub Date : 2022-04-01 DOI: 10.1146/annurev-cancerbio-070120-102521
Varun Sahu, Chao Lu

Chromatin dysfunction has been implicated in a growing number of cancers especially in children and young adults. In addition to chromatin modifying and remodeling enzymes, mutations in histone genes are linked to human cancers. Since the first reports of hotspot missense mutations affecting key residues at histone H3 tail, studies have revealed how these so-called "oncohistones" dominantly (H3K27M and H3K36M) or locally (H3.3G34R/W) inhibit corresponding histone methyltransferases and misregulate epigenome and transcriptome to promote tumorigenesis. More recently, widespread mutations in all four core histones are identified in diverse cancer types. Furthermore, an "oncohistone-like" protein EZHIP has been implicated in driving childhood ependymomas through a mechanism highly reminiscent of H3K27M mutation. We will review recent progresses on understanding the biochemical, molecular and biological mechanisms underlying the canonical and novel histone mutations. Importantly, these mechanistic insights have identified therapeutic opportunities for oncohistone-driven tumors.

染色质功能障碍与越来越多的癌症有关,特别是在儿童和年轻人中。除了染色质修饰和重塑酶,组蛋白基因的突变也与人类癌症有关。自首次报道影响组蛋白H3尾部关键残基的热点错义突变以来,研究揭示了这些所谓的“癌组蛋白”是如何显性地(H3K27M和H3K36M)或局部地(H3.3G34R/W)抑制相应的组蛋白甲基转移酶并错调控表观基因组和转录组,从而促进肿瘤发生的。最近,在不同的癌症类型中发现了所有四种核心组蛋白的广泛突变。此外,一种“癌组蛋白样”蛋白EZHIP通过一种高度类似于H3K27M突变的机制参与了儿童室管膜瘤的发生。我们将回顾最近在了解典型和新型组蛋白突变的生化、分子和生物学机制方面的进展。重要的是,这些机制的见解已经确定了肿瘤组蛋白驱动肿瘤的治疗机会。
{"title":"Oncohistones: Hijacking the histone code.","authors":"Varun Sahu,&nbsp;Chao Lu","doi":"10.1146/annurev-cancerbio-070120-102521","DOIUrl":"https://doi.org/10.1146/annurev-cancerbio-070120-102521","url":null,"abstract":"<p><p>Chromatin dysfunction has been implicated in a growing number of cancers especially in children and young adults. In addition to chromatin modifying and remodeling enzymes, mutations in histone genes are linked to human cancers. Since the first reports of hotspot missense mutations affecting key residues at histone H3 tail, studies have revealed how these so-called \"oncohistones\" dominantly (H3K27M and H3K36M) or locally (H3.3G34R/W) inhibit corresponding histone methyltransferases and misregulate epigenome and transcriptome to promote tumorigenesis. More recently, widespread mutations in all four core histones are identified in diverse cancer types. Furthermore, an \"oncohistone-like\" protein EZHIP has been implicated in driving childhood ependymomas through a mechanism highly reminiscent of H3K27M mutation. We will review recent progresses on understanding the biochemical, molecular and biological mechanisms underlying the canonical and novel histone mutations. Importantly, these mechanistic insights have identified therapeutic opportunities for oncohistone-driven tumors.</p>","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":"6 ","pages":"293-312"},"PeriodicalIF":7.7,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9802661/pdf/nihms-1860508.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10480574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
CRISPR Screens to Identify Regulators of Tumor Immunity. 通过 CRISPR 筛选确定肿瘤免疫调节剂。
IF 4.7 2区 医学 Q1 ONCOLOGY Pub Date : 2022-04-01 Epub Date: 2021-12-23 DOI: 10.1146/annurev-cancerbio-070120-094725
Martin W LaFleur, Arlene H Sharpe

Cancer immunotherapies, such as immune checkpoint blockade (ICB), have been used in a wide range of tumor types with immense clinical benefit. However, ICB does not work in all patients, and attempts to combine ICB with other immune-based therapies have not lived up to their initial promise. Thus, there is a significant unmet need to discover new targets and combination therapies to extend the benefits of immunotherapy to more patients. Systems biology approaches are well suited for addressing this problem because these approaches enable evaluation of many gene targets simultaneously and ranking their relative importance for a phenotype of interest. As such, loss-of-function CRISPR screens are an emerging set of tools being used to prioritize gene targets for modulating pathways of interest in tumor and immune cells. This review describes the first screens performed to discover cancer immunotherapy targets and the technological advances that will enable next-generation screens.

癌症免疫疗法,如免疫检查点阻断(ICB),已被用于多种肿瘤类型,并取得了巨大的临床疗效。然而,ICB 并非对所有患者都有效,将 ICB 与其他免疫疗法相结合的尝试也没有实现最初的承诺。因此,发现新靶点和联合疗法以将免疫疗法的益处扩大到更多患者身上的需求仍未得到满足。系统生物学方法非常适合解决这一问题,因为这些方法可以同时评估许多基因靶点,并对它们在相关表型中的相对重要性进行排序。因此,功能缺失 CRISPR 筛选是一套新兴的工具,用于优先选择基因靶点,以调节肿瘤和免疫细胞中的相关通路。本综述介绍了为发现癌症免疫疗法靶点而进行的首次筛选,以及为实现下一代筛选而取得的技术进步。
{"title":"CRISPR Screens to Identify Regulators of Tumor Immunity.","authors":"Martin W LaFleur, Arlene H Sharpe","doi":"10.1146/annurev-cancerbio-070120-094725","DOIUrl":"10.1146/annurev-cancerbio-070120-094725","url":null,"abstract":"<p><p>Cancer immunotherapies, such as immune checkpoint blockade (ICB), have been used in a wide range of tumor types with immense clinical benefit. However, ICB does not work in all patients, and attempts to combine ICB with other immune-based therapies have not lived up to their initial promise. Thus, there is a significant unmet need to discover new targets and combination therapies to extend the benefits of immunotherapy to more patients. Systems biology approaches are well suited for addressing this problem because these approaches enable evaluation of many gene targets simultaneously and ranking their relative importance for a phenotype of interest. As such, loss-of-function CRISPR screens are an emerging set of tools being used to prioritize gene targets for modulating pathways of interest in tumor and immune cells. This review describes the first screens performed to discover cancer immunotherapy targets and the technological advances that will enable next-generation screens.</p>","PeriodicalId":54233,"journal":{"name":"Annual Review of Cancer Biology-Series","volume":"6 ","pages":"103-122"},"PeriodicalIF":4.7,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9389862/pdf/nihms-1804564.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9282148","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Annual Review of Cancer Biology-Series
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1