Anna M. Addamo, Melinda S. Modrell, Marco Taviani, Annie Machordom
Despite the widespread use of integrative taxonomic approaches, many scleractinian coral genera and species remain grouped in polyphyletic families, classified as incertae sedis or simply understudied. Oculinidae Gray, 1847 represents a family for which many taxonomic questions remain unresolved, particularly those related to some of the current genera, such as Oculina Lamark, 1816 or recently removed genera, including Cladocora Ehrenberg, 1834 and Madrepora Linnaeus, 1758. Cladocora is currently assigned to the family Cladocoridae Milne Edwards & Haime, 1857 and a new family, Bathyporidae Kitahara, Capel, Zilberberg & Cairns, 2024, was recently raised to accommodate Madrepora. However, the name Bathyporidae is not valid because this was not formed on the basis of a type genus name. To resolve taxonomic questions related to these three genera, the evolutionary relationships are explored through phylogenetic analyses of 18 molecular markers. The results of these analyses support a close relationship between the species Oculina patagonica and Cladocora caespitosa, indicating that these may belong to the same family (and possibly genus), and highlighting the need for detailed revisions of Oculina and Cladocora. By contrast, a distant relationship is found between these two species and Madrepora oculata, with the overall evidence supporting the placement of Madrepora in the resurrected family Madreporidae Ehrenberg, 1834. This study advances our knowledge of coral systematics and highlights the need for a comprehensive review of the genera Oculina, Cladocora and Madrepora.
{"title":"Unravelling the relationships among Madrepora Linnaeus, 1758, Oculina Lamark, 1816 and Cladocora Ehrenberg, 1834 (Cnidaria: Anthozoa: Scleractinia)","authors":"Anna M. Addamo, Melinda S. Modrell, Marco Taviani, Annie Machordom","doi":"10.1071/is23027","DOIUrl":"https://doi.org/10.1071/is23027","url":null,"abstract":"<p>Despite the widespread use of integrative taxonomic approaches, many scleractinian coral genera and species remain grouped in polyphyletic families, classified as <i>incertae sedis</i> or simply understudied. Oculinidae Gray, 1847 represents a family for which many taxonomic questions remain unresolved, particularly those related to some of the current genera, such as <i>Oculina</i> Lamark, 1816 or recently removed genera, including <i>Cladocora</i> Ehrenberg, 1834 and <i>Madrepora</i> Linnaeus, 1758. <i>Cladocora</i> is currently assigned to the family Cladocoridae Milne Edwards & Haime, 1857 and a new family, Bathyporidae Kitahara, Capel, Zilberberg & Cairns, 2024, was recently raised to accommodate <i>Madrepora</i>. However, the name Bathyporidae is not valid because this was not formed on the basis of a type genus name. To resolve taxonomic questions related to these three genera, the evolutionary relationships are explored through phylogenetic analyses of 18 molecular markers. The results of these analyses support a close relationship between the species <i>Oculina patagonica</i> and <i>Cladocora caespitosa</i>, indicating that these may belong to the same family (and possibly genus), and highlighting the need for detailed revisions of <i>Oculina</i> and <i>Cladocora</i>. By contrast, a distant relationship is found between these two species and <i>Madrepora oculata</i>, with the overall evidence supporting the placement of <i>Madrepora</i> in the resurrected family Madreporidae Ehrenberg, 1834. This study advances our knowledge of coral systematics and highlights the need for a comprehensive review of the genera <i>Oculina</i>, <i>Cladocora</i> and <i>Madrepora</i>.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"14 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140831634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Silvia Vicario, Tullia Isotta Terraneo, Giovanni Chimienti, Davide Maggioni, Fabio Marchese, Sam J. Purkis, Ameer Abdulla Eweida, Mattie Rodrigue, Francesca Benzoni
Black corals occur as part of benthic assemblages from shallow to deep waters in all oceans. Despite the importance in many benthic ecosystems, where these act as biodiversity aggregators, antipatharians remain poorly studied, with 75% of the known species occurring below recreational SCUBA diving depth limits. Currently, information regarding the diversity and evolutionary history is limited, with most studies focusing on Hawaii and the South Pacific Ocean. Other regions of the world have received less attention, such as the Red Sea, where only two black coral families and four genera have been recorded. We provide the first analysis of the molecular diversity of black corals in the eastern Gulf of Aqaba and the northern and central Saudi Arabian Red Sea, based on a dataset of 161 antipatharian colonies collected down to 627 m deep. Based on specimen morphology, we ascribed our material to 11 genera belonging to 4 of the 7 known Antipatharia families, i.e. Antipathidae, Aphanipathidae, Myriopathidae and Schizopathidae. The genus level phylogeny of three intergenic mitochondrial regions, the trnW-IGR-nad2 (IgrW), nad5-IGR-nad1 (IgrN) and cox3-IGR-cox1 was reconstructed including previously published material. Overall, we recovered six molecular clades that included exclusively Red Sea sequences, with the highest diversity occurring at mesophotic depths. This study highlights that diversity of black corals in the Red Sea is much higher than previously known, with seven new generic records, suggesting that this basin may be a hotspot for antipatharian diversity as is known for other taxa. Our results recovered unresolved relationships within the order at the familial and generic levels. This emphasises the urgent need for an integration of genomic-wide data with a re-examination of informative morphological features necessary to revise the systematics of the order at all taxonomic levels.
{"title":"Molecular diversity of black corals from the Saudi Arabian Red Sea: a first assessment","authors":"Silvia Vicario, Tullia Isotta Terraneo, Giovanni Chimienti, Davide Maggioni, Fabio Marchese, Sam J. Purkis, Ameer Abdulla Eweida, Mattie Rodrigue, Francesca Benzoni","doi":"10.1071/is23041","DOIUrl":"https://doi.org/10.1071/is23041","url":null,"abstract":"<p>Black corals occur as part of benthic assemblages from shallow to deep waters in all oceans. Despite the importance in many benthic ecosystems, where these act as biodiversity aggregators, antipatharians remain poorly studied, with 75% of the known species occurring below recreational SCUBA diving depth limits. Currently, information regarding the diversity and evolutionary history is limited, with most studies focusing on Hawaii and the South Pacific Ocean. Other regions of the world have received less attention, such as the Red Sea, where only two black coral families and four genera have been recorded. We provide the first analysis of the molecular diversity of black corals in the eastern Gulf of Aqaba and the northern and central Saudi Arabian Red Sea, based on a dataset of 161 antipatharian colonies collected down to 627 m deep. Based on specimen morphology, we ascribed our material to 11 genera belonging to 4 of the 7 known Antipatharia families, i.e. Antipathidae, Aphanipathidae, Myriopathidae and Schizopathidae. The genus level phylogeny of three intergenic mitochondrial regions, the <i>trnW-IGR-nad2</i> (<i>IgrW</i>), <i>nad5-IGR-nad1</i> (<i>IgrN</i>) and <i>cox3-IGR-cox1</i> was reconstructed including previously published material. Overall, we recovered six molecular clades that included exclusively Red Sea sequences, with the highest diversity occurring at mesophotic depths. This study highlights that diversity of black corals in the Red Sea is much higher than previously known, with seven new generic records, suggesting that this basin may be a hotspot for antipatharian diversity as is known for other taxa. Our results recovered unresolved relationships within the order at the familial and generic levels. This emphasises the urgent need for an integration of genomic-wide data with a re-examination of informative morphological features necessary to revise the systematics of the order at all taxonomic levels.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"90 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140577784","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Scutigeromorph centipedes are conspicuous, yet often ignored myriapods for which little work has been conducted in southern South America. After examining recent and museum collections from Chile and Argentina, two new species of generic uncertainty were identified. A new genus of scutigerid centipede, Edgethreua, is therefore described with two new species, E. chilensis from Central Chile (type species of the genus) and E. goloboffi from Argentinian Patagonia. The new genus is characterised by the presence of scattered setiform bristles with short paired spines and the absence of simple spinulae and spines on all stomatotergites, the presence of a single spine-bristle in the prefemur of the second maxilla, a patch of cuticular ridges and pores surrounding the sensilla of the proximal labral portion of the epipharynx, the morphology of the sensilla of the distal patch of the hypopharynx and the morphology of the female gonopods. A phylogenetic analysis of the new species using two nuclear ribosomal RNA genes (18S and 28S rRNA), two mitochondrial ribosomal RNA genes (12S and 16S rRNA) and the mitochondrial protein-encoding gene cytochrome c oxidase subunit I show that the new genus does not cluster with any other described genus of scutigeromorph represented in molecular phylogenies. The data indicate that the new genus is probably sister group to a clade including the genera Lassophora, Ballonema and the subfamily Thereuoneminae, although one analysis suggests a position as sister group to Scutigerinae.
鳞翅目蜈蚣是南美洲南部的一种明显但经常被忽视的近足类动物,有关它的研究工作很少。在考察了智利和阿根廷最近的收藏品和博物馆藏品后,发现了两个属种不确定的新物种。因此,本文描述了一个新的鳞片蜈蚣属--Edgethreua,其中包括两个新物种:智利中部的 E. chilensis(该属的模式种)和阿根廷巴塔哥尼亚的 E. goloboffi。该新属的特征是:所有口器上都有散在的带短成对刺的刚毛,而没有简单的刺和刺,第二上颌骨前端有一根刺毛,会咽近端唇部的感觉器周围有一片角质脊和孔,下咽远端感觉器的形态以及雌性性腺的形态。利用两个核核糖体 RNA 基因(18S 和 28S rRNA)、两个线粒体核核糖体 RNA 基因(12S 和 16S rRNA)以及线粒体蛋白编码基因细胞色素 c 氧化酶亚单位 I 对该新种进行的系统进化分析表明,该新属与分子系统进化论中描述的任何其他鲭属都不聚类。数据表明,该新属可能是包括 Lassophora 属、Ballonema 属和 Thereuoneminae 亚科在内的一个支系的姊妹群,尽管有一项分析表明该属是 Scutigerinae 的姊妹群。ZooBank: urn:lsid:zoobank.org:pub:A4D453F3-9031-4E21-84C7-87F16C07AD51
{"title":"A new genus of scutigerid centipede from southern South America with the description of two new species and an updated molecular phylogeny of the myriapod order Scutigeromorpha (Myriapoda: Chilopoda)","authors":"Andrés O. Porta, Gonzalo Giribet","doi":"10.1071/is24006","DOIUrl":"https://doi.org/10.1071/is24006","url":null,"abstract":"<p>Scutigeromorph centipedes are conspicuous, yet often ignored myriapods for which little work has been conducted in southern South America. After examining recent and museum collections from Chile and Argentina, two new species of generic uncertainty were identified. A new genus of scutigerid centipede, <i>Edgethreua</i>, is therefore described with two new species, <i>E. chilensis</i> from Central Chile (type species of the genus) and <i>E. goloboffi</i> from Argentinian Patagonia. The new genus is characterised by the presence of scattered setiform bristles with short paired spines and the absence of simple spinulae and spines on all stomatotergites, the presence of a single spine-bristle in the prefemur of the second maxilla, a patch of cuticular ridges and pores surrounding the sensilla of the proximal labral portion of the epipharynx, the morphology of the sensilla of the distal patch of the hypopharynx and the morphology of the female gonopods. A phylogenetic analysis of the new species using two nuclear ribosomal RNA genes (<i>18S</i> and <i>28S</i> rRNA), two mitochondrial ribosomal RNA genes (<i>12S</i> and <i>16S</i> rRNA) and the mitochondrial protein-encoding gene cytochrome <i>c</i> oxidase subunit <i>I</i> show that the new genus does not cluster with any other described genus of scutigeromorph represented in molecular phylogenies. The data indicate that the new genus is probably sister group to a clade including the genera <i>Lassophora</i>, <i>Ballonema</i> and the subfamily Thereuoneminae, although one analysis suggests a position as sister group to Scutigerinae.</p><p>ZooBank: urn:lsid:zoobank.org:pub:A4D453F3-9031-4E21-84C7-87F16C07AD51</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"52 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140577680","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The rhinebothriidean tapeworm family Escherbothriidae has recently been expanded to include the genus Ivanovcestus, species of which parasitise arhynchobatid skates. Similarities in morphology and host associations between Ivanovcestus and Semiorbiseptum – a genus yet to be assigned to one of the families in the order Rhinebothriidea – led us to explore the possibility that Semiorbiseptum might also belong in the Escherbothriidae. Morphological similarities with Scalithrium ivanovae, Scalithrium kirchneri and Rhinebothrium scobinae, all of which also parasitise arhynchobatid skates, raised questions regarding the generic placements of these species. In addition, new collections from the skate Sympterygia brevicaudata revealed two new species that morphologically resemble species of Ivanovcestus. A combination of morphological and molecular data were used to assess the generic placement of the newly discovered species and refine our understanding of the membership of the family Escherbothriidae. Sequence data for the D1–D3 region of the 28S rDNA gene were generated de novo for 14 specimens of 7 rhinebothriidean species and combined with comparable published data to represent all 6 families in the Rhinebothriidea in the analysis. The phylogenetic tree resulting from maximum likelihood analysis strongly supports the inclusion of the genus Semiorbiseptum in the family Escherbothriidae. Our work also suggests that the skate-hosted species previously assigned to Scalithrium and Rhinebothrium are also members of Semiorbiseptum and that Ivanovcestus is a junior synonym of Semiorbiseptum. Six species are transferred to Semiorbiseptum, bringing the total number of species in the genus to ten. The diagnosis of Semiorbiseptum is amended to accommodate the additional species. A second species in the previously monotypic type genus of the family, Escherbothrium, is described. The diagnosis of the Escherbothriidae is amended to include the new and transferred species. This study underscores the importance of integrating morphological and molecular data in bringing resolution to cestode systematics. We believe our findings provide a robust foundation for future research into the evolutionary history and host associations of cestodes within the order Rhinebothriidea and beyond. These also highlight the importance of expanding our understanding of skate-hosted cestodes.
{"title":"Phylogeny of the cestode family Escherbothriidae (Cestoda: Rhinebothriidea) reveals unexpected patterns of association with skate hosts","authors":"V. M. Bueno, B. Trevisan, J. N. Caira","doi":"10.1071/is23056","DOIUrl":"https://doi.org/10.1071/is23056","url":null,"abstract":"<p>The rhinebothriidean tapeworm family Escherbothriidae has recently been expanded to include the genus <i>Ivanovcestus</i>, species of which parasitise arhynchobatid skates. Similarities in morphology and host associations between <i>Ivanovcestus</i> and <i>Semiorbiseptum</i> – a genus yet to be assigned to one of the families in the order Rhinebothriidea – led us to explore the possibility that <i>Semiorbiseptum</i> might also belong in the Escherbothriidae. Morphological similarities with <i>Scalithrium ivanovae</i>, <i>Scalithrium kirchneri</i> and <i>Rhinebothrium scobinae</i>, all of which also parasitise arhynchobatid skates, raised questions regarding the generic placements of these species. In addition, new collections from the skate <i>Sympterygia brevicaudata</i> revealed two new species that morphologically resemble species of <i>Ivanovcestus</i>. A combination of morphological and molecular data were used to assess the generic placement of the newly discovered species and refine our understanding of the membership of the family Escherbothriidae. Sequence data for the D1–D3 region of the <i>28S rDNA</i> gene were generated <i>de novo</i> for 14 specimens of 7 rhinebothriidean species and combined with comparable published data to represent all 6 families in the Rhinebothriidea in the analysis. The phylogenetic tree resulting from maximum likelihood analysis strongly supports the inclusion of the genus <i>Semiorbiseptum</i> in the family Escherbothriidae. Our work also suggests that the skate-hosted species previously assigned to <i>Scalithrium</i> and <i>Rhinebothrium</i> are also members of <i>Semiorbiseptum</i> and that <i>Ivanovcestus</i> is a junior synonym of <i>Semiorbiseptum</i>. Six species are transferred to <i>Semiorbiseptum</i>, bringing the total number of species in the genus to ten. The diagnosis of <i>Semiorbiseptum</i> is amended to accommodate the additional species. A second species in the previously monotypic type genus of the family, <i>Escherbothrium</i>, is described. The diagnosis of the Escherbothriidae is amended to include the new and transferred species. This study underscores the importance of integrating morphological and molecular data in bringing resolution to cestode systematics. We believe our findings provide a robust foundation for future research into the evolutionary history and host associations of cestodes within the order Rhinebothriidea and beyond. These also highlight the importance of expanding our understanding of skate-hosted cestodes.</p><p>ZooBank: urn:lsid:zoobank.org:pub:8052AFCA-5FBD-4430-95F4-0E5E368DEA3D</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"18 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140578022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Niklas Dreyer, Jørgen Olesen, Mark J. Grygier, Danny Eibye-Jacobsen, Alexandra S. Savchenko, Yoshihisa Fujita, Gregory A. Kolbasov, Ryuji J. Machida, Benny K. K. Chan, Ferran Palero
Despite discovery more than 100 years ago and documented global occurrence from shallow waters to the deep sea, the life cycle of the enigmatic crustacean y-larvae isincompletely understood and adult forms remain unknown. To date, only 2 of the 17 formally described species, all based on larval stages, have been investigated using an integrative taxonomic approach. This approach provided descriptions of the morphology of the naupliar and cyprid stages, and made use of exuvial voucher material and DNA barcodes. To improve our knowledge about the evolutionary history and ecological importance of y-larvae, we developed a novel protocol that maximises the amount of morpho-ecological and molecular data that can be harvested from single larval specimens. This includes single-specimen DNA barcoding and daily imaging of y-nauplii reared in culture dishes, mounting of the last naupliar exuviae on a slide as a reference voucher, live imaging of the y-cyprid instar that follows, and fixation, DNA extraction, amplification and sequencing of the y-cyprid specimen. Through development and testing of a suite of new primers for both nuclear and mitochondrial protein-coding and ribosomal genes, we showcase how new sequence data can be used to estimate the phylogeny of Facetotecta. We expect that our novel procedure will help to unravel the complex systematics of y-larvae and show how these fascinating larval forms have evolved. Moreover, we posit that our protocols should work on larval specimens from a diverse array of moulting marine invertebrate taxa.
尽管早在 100 多年前就发现了这种甲壳类动物,并记录了从浅水到深海的全球分布情况,但人们对这种神秘甲壳类动物的生命周期仍一无所知,其成虫形态也仍不为人所知。迄今为止,在 17 个正式描述的物种中,只有 2 个物种(均以幼虫阶段为基础)采用综合分类方法进行了研究。这种方法提供了对初生幼体和幼体阶段形态的描述,并利用了冲积层凭证材料和 DNA 条形码。为了更好地了解 y 型幼体的进化史和生态重要性,我们开发了一种新的方案,可以从单个幼体标本中获取最大数量的形态生态学和分子数据。这包括对在培养皿中饲养的幼体进行单个标本DNA条形码编码和每日成像,将最后一个幼体的外植体安装在载玻片上作为参考凭证,对随后的幼体蜕皮期进行实时成像,以及对幼体标本进行固定、DNA提取、扩增和测序。通过开发和测试一套针对核和线粒体蛋白编码基因和核糖体基因的新引物,我们展示了如何利用新的序列数据来估算 Facetotecta 的系统发育。我们希望我们的新程序将有助于揭示 Y 型幼虫复杂的系统学,并展示这些迷人的幼虫是如何进化的。此外,我们认为我们的方法应该适用于各种蜕皮海洋无脊椎动物类群的幼体标本。
{"title":"Novel molecular resources for single-specimen barcoding of enigmatic crustacean y-larvae","authors":"Niklas Dreyer, Jørgen Olesen, Mark J. Grygier, Danny Eibye-Jacobsen, Alexandra S. Savchenko, Yoshihisa Fujita, Gregory A. Kolbasov, Ryuji J. Machida, Benny K. K. Chan, Ferran Palero","doi":"10.1071/is23018","DOIUrl":"https://doi.org/10.1071/is23018","url":null,"abstract":"<p>Despite discovery more than 100 years ago and documented global occurrence from shallow waters to the deep sea, the life cycle of the enigmatic crustacean y-larvae isincompletely understood and adult forms remain unknown. To date, only 2 of the 17 formally described species, all based on larval stages, have been investigated using an integrative taxonomic approach. This approach provided descriptions of the morphology of the naupliar and cyprid stages, and made use of exuvial voucher material and DNA barcodes. To improve our knowledge about the evolutionary history and ecological importance of y-larvae, we developed a novel protocol that maximises the amount of morpho-ecological and molecular data that can be harvested from single larval specimens. This includes single-specimen DNA barcoding and daily imaging of y-nauplii reared in culture dishes, mounting of the last naupliar exuviae on a slide as a reference voucher, live imaging of the y-cyprid instar that follows, and fixation, DNA extraction, amplification and sequencing of the y-cyprid specimen. Through development and testing of a suite of new primers for both nuclear and mitochondrial protein-coding and ribosomal genes, we showcase how new sequence data can be used to estimate the phylogeny of Facetotecta. We expect that our novel procedure will help to unravel the complex systematics of y-larvae and show how these fascinating larval forms have evolved. Moreover, we posit that our protocols should work on larval specimens from a diverse array of moulting marine invertebrate taxa.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"9 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140108060","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Olivia Evangelista, Nikolai Tatarnic, Keith Bayless
Ulopinae is a distinctive subfamily of leafhoppers that is widely distributed across the Afrotropical, Palearctic, Indomalayan and Australasian regions. The ulopine fauna of Australia is entirely endemic and includes two tribes of striking appearance, the Ulopini and Cephalelini. Knowledge of these groups is fragmentary and in many instances, no information is available beyond original descriptions. We assess the monophyly, phylogenetic placement and species-level diversity of the Ulopini genus Austrolopa. Phylogenetic analyses based on sequence data from target nuclear loci (18S, 28S, H2A and H3) and mitochondrial genomes (15 genes) for 23 membracoid taxa yielded congruent topologies. Our results provide strong evidence for the monophyly of Ulopinae and a clade consisting of Ulopini + Cephalelini. However, a non-monophyletic Cephalelini arises from within a polyphyletic Ulopini. Austrolopa was strongly recovered as monophyletic in all analyses, a result also supported by morphological features. The genus currently includes six species, three of which are described based on morphological and molecular data: Austrolopa botanica, sp. nov., Austrolopa rotunda, sp. nov. and Austrolopa sublima, sp. nov. A lectotype designation is provided for Austrolopa kingensis Evans, 1937, sp. reval. Our findings illustrate that the Australian Ulopinae is far more diverse than currently circumscribed and several species of Austrolopa are yet to be recognised.
{"title":"Phylogenomics of endemic Australian Ulopinae (Hemiptera: Cicadomorpha: Cicadellidae)","authors":"Olivia Evangelista, Nikolai Tatarnic, Keith Bayless","doi":"10.1071/is23035","DOIUrl":"https://doi.org/10.1071/is23035","url":null,"abstract":"<p>Ulopinae is a distinctive subfamily of leafhoppers that is widely distributed across the Afrotropical, Palearctic, Indomalayan and Australasian regions. The ulopine fauna of Australia is entirely endemic and includes two tribes of striking appearance, the Ulopini and Cephalelini. Knowledge of these groups is fragmentary and in many instances, no information is available beyond original descriptions. We assess the monophyly, phylogenetic placement and species-level diversity of the Ulopini genus <i>Austrolopa</i>. Phylogenetic analyses based on sequence data from target nuclear loci (<i>18S</i>, <i>28S</i>, <i>H2A</i> and <i>H3</i>) and mitochondrial genomes (15 genes) for 23 membracoid taxa yielded congruent topologies. Our results provide strong evidence for the monophyly of Ulopinae and a clade consisting of Ulopini + Cephalelini. However, a non-monophyletic Cephalelini arises from within a polyphyletic Ulopini. <i>Austrolopa</i> was strongly recovered as monophyletic in all analyses, a result also supported by morphological features. The genus currently includes six species, three of which are described based on morphological and molecular data: <i>Austrolopa botanica</i>, <b>sp. nov.</b>, <i>Austrolopa rotunda</i>, <b>sp. nov.</b> and <i>Austrolopa sublima</i>, <b>sp. nov.</b> A lectotype designation is provided for <i>Austrolopa kingensis</i> Evans, 1937, <b>sp. reval.</b> Our findings illustrate that the Australian Ulopinae is far more diverse than currently circumscribed and several species of <i>Austrolopa</i> are yet to be recognised.</p><p>ZooBank: urn:lsid:zoobank.org:pub:1480285B-8F61-4659-A929-2B1EF3168868</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"30 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139765316","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A fine-scale phylogenetic and phylogeographic analysis of Peripatopsis lawrencei s.l. was conducted with both mitochondrial and nuclear DNA sequence data, using both external morphology and scanning electron microscopy of taxonomically important characters. A total of 119 sequences were used for the mitochondrial cytochrome c oxidase subunit I (COI) whereas a single representative specimen from each locality was sequenced for the nuclear 18S rRNA locus. Phylogenetic analyses were conducted on the total COI data set and the combined COI + 18S rRNA data set using a Bayesian analysis and maximum likelihood analyses. For the combined DNA sequence data set, a divergence time estimation was further undertaken in BEAST and specimens placed in a phylogenetic framework including all the described Peripatopsis species from South Africa. In addition, a phylogeographic study was conducted exclusively on P. lawrencei s.s. (clade A) using an analysis of molecular variance and haplotype network. Phylogenetic results indicated that, at the Oubos sample locality, two highly distinct genetic lineages were present (clades A and B), whereas a divergence time estimation suggests a Miocene cladogenesis of the novel Oubos lineage. Marked phylogeographic structure was observed for P. lawrencei s.s. (restricted to clade A) across the distribution range with limited maternal dispersal. Morphologically, the two sympatric lineages at Oubos A and B differed in leg pair number, ventral colour and dorsal scale rank counts, as evident from scanning electron microscopy. Our results support the recognition of a distinct species that occurs in sympatry with P. lawrencei s.s. The new species, P. aereus sp. nov. (clade B) is described and the implication for fine-scale taxonomic studies on saproxylic taxa is discussed.
利用线粒体和核DNA序列数据,并通过外部形态学和扫描电子显微镜观察分类学上的重要特征,对Peripatopsis lawrencei s.l.进行了精细的系统发育和系统地理学分析。线粒体细胞色素 c 氧化酶亚单位 I(COI)共使用了 119 个序列,而核 18S rRNA 位点则对每个地点的一个代表性标本进行了测序。采用贝叶斯分析法和最大似然法对 COI 数据集和 COI + 18S rRNA 数据集进行了系统发育分析。对于合并的 DNA 序列数据集,进一步在 BEAST 中进行了分歧时间估计,并将标本置于一个系统发育框架中,其中包括南非所有已描述的 Peripatopsis 物种。此外,利用分子方差分析和单体型网络,专门对 P. lawrencei s.s.(支系 A)进行了系统地理学研究。系统发育结果表明,在 Oubos 样地,存在两个高度不同的遗传系(支系 A 和 B),而对分歧时间的估计表明,新的 Oubos 系是中新世的支系形成。在整个分布区观察到明显的系统地理结构,P. lawrencei s.s.(局限于支系 A)的母系扩散有限。从形态上看,扫描电子显微镜显示,奥博斯 A 支系和 B 支系在腿对数、腹面颜色和背鳞等级计数方面存在差异。描述了新种 P. aereus sp. nov.(B 支系),并讨论了对无鞘类群进行精细分类研究的意义。ZooBank: urn:lsid:zoobank.org:pub:AB6E0BDA-7B5F-4FD3-A863-BA7C814E278C
{"title":"Sample design in biodiversity studies matters: a fine-scale study of Lawrence’s velvet worm, Peripatopsis lawrencei (Onychophora: Peripatopsidae), reveals hidden diversity","authors":"Julian A. Nieto Lawrence, Savel R. Daniels","doi":"10.1071/is23051","DOIUrl":"https://doi.org/10.1071/is23051","url":null,"abstract":"<p>A fine-scale phylogenetic and phylogeographic analysis of <i>Peripatopsis lawrencei</i> s.l. was conducted with both mitochondrial and nuclear DNA sequence data, using both external morphology and scanning electron microscopy of taxonomically important characters. A total of 119 sequences were used for the mitochondrial cytochrome <i>c</i> oxidase subunit I (<i>COI</i>) whereas a single representative specimen from each locality was sequenced for the nuclear <i>18S</i> rRNA locus. Phylogenetic analyses were conducted on the total <i>COI</i> data set and the combined <i>COI</i> + <i>18S</i> rRNA data set using a Bayesian analysis and maximum likelihood analyses. For the combined DNA sequence data set, a divergence time estimation was further undertaken in BEAST and specimens placed in a phylogenetic framework including all the described <i>Peripatopsis</i> species from South Africa. In addition, a phylogeographic study was conducted exclusively on <i>P. lawrencei</i> s.s. (clade A) using an analysis of molecular variance and haplotype network. Phylogenetic results indicated that, at the Oubos sample locality, two highly distinct genetic lineages were present (clades A and B), whereas a divergence time estimation suggests a Miocene cladogenesis of the novel Oubos lineage. Marked phylogeographic structure was observed for <i>P. lawrencei</i> s.s. (restricted to clade A) across the distribution range with limited maternal dispersal. Morphologically, the two sympatric lineages at Oubos A and B differed in leg pair number, ventral colour and dorsal scale rank counts, as evident from scanning electron microscopy. Our results support the recognition of a distinct species that occurs in sympatry with <i>P. lawrencei</i> s.s. The new species<i>, P. aereus</i> sp. nov. (clade B) is described and the implication for fine-scale taxonomic studies on saproxylic taxa is discussed.</p><p>ZooBank: urn:lsid:zoobank.org:pub:AB6E0BDA-7B5F-4FD3-A863-BA7C814E278C</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"276 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139765124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bernhard A Huber, Guanliang Meng, Tim M Dederichs, Peter Michalik, Martin Forman, Jirí Král
Ninetinae is a group of small to tiny short-legged spiders largely restricted to arid habitats. Among daddy-long-legs spiders (Pholcidae) this is by far the least diverse subfamily but this may partly be a result of inadequate collecting, poor representation in collections or scientific neglect. We build on a large recent collection of the ninetine genus Papiamenta Huber, 2000 from the Leeward Antilles and use cytochrome oxidase 1 (COI ) sequences, extensive scanning electron microscopy data, transmission electron microscopy data and karyotyping to analyse this geographically isolated and poorly known island genus. COI sequences support the split between the two morphologically distinct species on Curaçao but genetic distances between these are surprisingly low (7.4-9.8%; mean 8.6%). The type species P. levii (Gertsch, 1982) may include more than one species but COI and morphology suggest conflicting clade limits. A third species, P. bonay Huber sp. nov. is newly described from Bonaire. Our data on sperm ultrastructure and karyology are puzzling as these suggest different phylogenetic affinities of Papiamenta to other genera. Males transfer sperm as individual sperm (cleistosperm), agreeing with the putative closest relatives as suggested by molecular data, the North American genera Pholcophora and Tolteca . The sex chromosome system (X 1 X 2 X 3 Y ) of P. levii , however, is as in the South American Ninetinae genera Gertschiola and Nerudia but different from the putative closest relatives. ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.
九脚亚科(Ninetinae)是一个由小型到微小短腿蜘蛛组成的亚科,主要局限于干旱地区。在长腿蜘蛛亚科(Pholcidae)中,这是迄今为止种类最少的一个亚科,但部分原因可能是采集不足、在馆藏中代表性差或科学上的忽视。我们以最近从背风安的列斯群岛收集到的大量九脚蜘蛛属 Papiamenta Huber(2000 年)为基础,利用细胞色素氧化酶 1(COI)序列、大量扫描电子显微镜数据、透射电子显微镜数据和核型分析法对这一地理位置孤立、鲜为人知的岛屿属进行了分析。COI 序列支持将库拉索岛上形态上不同的两个物种分开,但它们之间的遗传距离却出奇地低(7.4%-9.8%;平均 8.6%)。模式种 P. levii(Gertsch,1982 年)可能包括一个以上的种,但 COI 和形态学表明其支系界限相互矛盾。第三个物种 P. bonay Huber sp.我们关于精子超微结构和核果学的数据令人费解,因为这些数据表明 Papiamenta 与其他属的系统发育关系不同。雄虫以单个精子(裂殖体)的形式转移精子,这与分子数据所显示的假定近亲--北美的 Pholcophora 属和 Tolteca 属--一致。然而,P. levii 的性染色体系统(X 1 X 2 X 3 Y)与南美洲九节属的 Gertschiola 和 Nerudia 相同,但与假定的近亲不同。ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.
{"title":"Castaways: the Leeward Antilles endemic spider genus <i>Papiamenta</i> (Araneae: Pholcidae).","authors":"Bernhard A Huber, Guanliang Meng, Tim M Dederichs, Peter Michalik, Martin Forman, Jirí Král","doi":"10.1071/IS23052","DOIUrl":"10.1071/IS23052","url":null,"abstract":"<p><p>Ninetinae is a group of small to tiny short-legged spiders largely restricted to arid habitats. Among daddy-long-legs spiders (Pholcidae) this is by far the least diverse subfamily but this may partly be a result of inadequate collecting, poor representation in collections or scientific neglect. We build on a large recent collection of the ninetine genus Papiamenta Huber, 2000 from the Leeward Antilles and use cytochrome oxidase 1 (COI ) sequences, extensive scanning electron microscopy data, transmission electron microscopy data and karyotyping to analyse this geographically isolated and poorly known island genus. COI sequences support the split between the two morphologically distinct species on Curaçao but genetic distances between these are surprisingly low (7.4-9.8%; mean 8.6%). The type species P. levii (Gertsch, 1982) may include more than one species but COI and morphology suggest conflicting clade limits. A third species, P. bonay Huber sp. nov. is newly described from Bonaire. Our data on sperm ultrastructure and karyology are puzzling as these suggest different phylogenetic affinities of Papiamenta to other genera. Males transfer sperm as individual sperm (cleistosperm), agreeing with the putative closest relatives as suggested by molecular data, the North American genera Pholcophora and Tolteca . The sex chromosome system (X 1 X 2 X 3 Y ) of P. levii , however, is as in the South American Ninetinae genera Gertschiola and Nerudia but different from the putative closest relatives. ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"38 ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140923825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. N. Kulagin, U. V. Simakova, A. A. Lunina, A. L. Vereshchaka
A recent molecular phylogenetic and biogeographic study on the krill genus Hansarsia revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in H. microps, H. atlantica and H. tenella. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial COI gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (H3 and ITS1) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic Hansarsia. The strongest divergence was revealed between the two clades of H. tenella, one of which we diagnosed as a new species. Two clades of H. megalops also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in H. microps and H. atlantica are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises.
{"title":"An integrative taxonomic approach to the Atlantic Hansarsia (formerly Nematoscelis) yields new krill taxa (Crustacea: Euphausiidae)","authors":"D. N. Kulagin, U. V. Simakova, A. A. Lunina, A. L. Vereshchaka","doi":"10.1071/is23034","DOIUrl":"https://doi.org/10.1071/is23034","url":null,"abstract":"<p>A recent molecular phylogenetic and biogeographic study on the krill genus <i>Hansarsia</i> revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in <i>H. microps</i>, <i>H. atlantica</i> and <i>H. tenella</i>. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial <i>COI</i> gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (<i>H3</i> and <i>ITS1</i>) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic <i>Hansarsia.</i> The strongest divergence was revealed between the two clades of <i>H. tenella</i>, one of which we diagnosed as a new species. Two clades of <i>H. megalops</i> also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in <i>H. microps</i> and <i>H. atlantica</i> are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises.</p><p>ZooBank: urn:lsid:zoobank.org:pub:AE045636-50EF-450A-B9B3-9231E8B91522</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"31 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139495995","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Although most members of the freshwater leech family Glossiphoniidae have mid-body somites divided into three annuli, the genus Torix Blanchard, 1893 is distinguished by two-annuli somites. Torix has high species richness in Far East Asia, and three nominal species have been recognised in the Japanese Archipelago and adjacent regions that can be distinguished by a combination of both internal and external morphological characteristics. However, recent studies have shown that these diagnostic features are ontogenetically variable and this has resulted in taxonomic confusion among Torix species endemic to the Japanese Archipelago. In this study, we revisit the taxonomic accounts of T. orientalis (Oka, 1925) and T. tagoi (Oka, 1925), in addition to that of the recently redescribed T. tukubana (Oka, 1935) to clarify the diagnostic characteristics for each of the three species. Our morphological and molecular phylogenetic analyses demonstrated that the three Torix species in Japan are indistinguishable. We therefore conclude that these species should be synonymised and treated as a single species. The specific names orientalis and tagoi were simultaneously established under the genus Oligobdella Moore, 1918, therefore we acted as First Reviser and gave precedence to the name O. tagoi, thus the valid name for the Far East Asian Torix species is T. tagoi unless T. orientalis and T. tagoi are treated as distinct species. There are several type localities for T. tagoi and the name-bearing types have been lost, therefore we designate a neotype for this species to obviate zoological and nomenclatural issues.
尽管淡水水蛭科(Glossiphoniidae)的大多数成员的中体体节都分为三个环,但Torix Blanchard, 1893属的体节却分为两个环。Torix 在远东亚洲的物种丰富度很高,在日本列岛和邻近地区已发现三个标称物种,可通过内部和外部形态特征的组合进行区分。然而,最近的研究表明,这些诊断特征在本体上是可变的,这导致了日本列岛特有的榧属物种在分类上的混乱。在本研究中,我们重新审视了 T. orientalis(Oka,1925 年)和 T. tagoi(Oka,1925 年)的分类学描述,以及最近重新描述的 T. tukubana(Oka,1935 年)的分类学描述,以澄清这三个物种各自的诊断特征。我们的形态学和分子系统学分析表明,日本的这三个榧属物种是无法区分的。因此,我们得出结论,这些物种应被同化为一个物种。tagoi,因此除非 T. orientalis 和 T. tagoi 被视为不同的种,否则远东亚洲榧种的有效名称为 T. tagoi。T. tagoi 的模式产地有几个,而命名模式已经丢失,因此我们为该种指定一个新模式,以避免动物学和命名上的问题。ZooBank: urn:lsid:zoobank.org:pub:E2DBF999-3B51-456F-AB04-A7D138E0AF2D
{"title":"Lumping three nominal species into one: taxonomic revision of amphibian parasitic leeches of Torix in Far East Asia (Hirudinea: Glossiphoniidae)","authors":"Chiaki Kambayashi, Takafumi Nakano","doi":"10.1071/is23042","DOIUrl":"https://doi.org/10.1071/is23042","url":null,"abstract":"<p>Although most members of the freshwater leech family Glossiphoniidae have mid-body somites divided into three annuli, the genus <i>Torix</i> Blanchard, 1893 is distinguished by two-annuli somites. <i>Torix</i> has high species richness in Far East Asia, and three nominal species have been recognised in the Japanese Archipelago and adjacent regions that can be distinguished by a combination of both internal and external morphological characteristics. However, recent studies have shown that these diagnostic features are ontogenetically variable and this has resulted in taxonomic confusion among <i>Torix</i> species endemic to the Japanese Archipelago. In this study, we revisit the taxonomic accounts of <i>T. orientalis</i> (Oka, 1925) and <i>T. tagoi</i> (Oka, 1925), in addition to that of the recently redescribed <i>T. tukubana</i> (Oka, 1935) to clarify the diagnostic characteristics for each of the three species. Our morphological and molecular phylogenetic analyses demonstrated that the three <i>Torix</i> species in Japan are indistinguishable. We therefore conclude that these species should be synonymised and treated as a single species. The specific names <i>orientalis</i> and <i>tagoi</i> were simultaneously established under the genus <i>Oligobdella</i> Moore, 1918, therefore we acted as First Reviser and gave precedence to the name <i>O. tagoi</i>, thus the valid name for the Far East Asian <i>Torix</i> species is <i>T. tagoi</i> unless <i>T. orientalis</i> and <i>T. tagoi</i> are treated as distinct species. There are several type localities for <i>T. tagoi</i> and the name-bearing types have been lost, therefore we designate a neotype for this species to obviate zoological and nomenclatural issues.</p><p>ZooBank: urn:lsid:zoobank.org:pub:E2DBF999-3B51-456F-AB04-A7D138E0AF2D</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"111 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138560369","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}