Niklas Dreyer, Jørgen Olesen, Mark J. Grygier, Danny Eibye-Jacobsen, Alexandra S. Savchenko, Yoshihisa Fujita, Gregory A. Kolbasov, Ryuji J. Machida, Benny K. K. Chan, Ferran Palero
Despite discovery more than 100 years ago and documented global occurrence from shallow waters to the deep sea, the life cycle of the enigmatic crustacean y-larvae isincompletely understood and adult forms remain unknown. To date, only 2 of the 17 formally described species, all based on larval stages, have been investigated using an integrative taxonomic approach. This approach provided descriptions of the morphology of the naupliar and cyprid stages, and made use of exuvial voucher material and DNA barcodes. To improve our knowledge about the evolutionary history and ecological importance of y-larvae, we developed a novel protocol that maximises the amount of morpho-ecological and molecular data that can be harvested from single larval specimens. This includes single-specimen DNA barcoding and daily imaging of y-nauplii reared in culture dishes, mounting of the last naupliar exuviae on a slide as a reference voucher, live imaging of the y-cyprid instar that follows, and fixation, DNA extraction, amplification and sequencing of the y-cyprid specimen. Through development and testing of a suite of new primers for both nuclear and mitochondrial protein-coding and ribosomal genes, we showcase how new sequence data can be used to estimate the phylogeny of Facetotecta. We expect that our novel procedure will help to unravel the complex systematics of y-larvae and show how these fascinating larval forms have evolved. Moreover, we posit that our protocols should work on larval specimens from a diverse array of moulting marine invertebrate taxa.
尽管早在 100 多年前就发现了这种甲壳类动物,并记录了从浅水到深海的全球分布情况,但人们对这种神秘甲壳类动物的生命周期仍一无所知,其成虫形态也仍不为人所知。迄今为止,在 17 个正式描述的物种中,只有 2 个物种(均以幼虫阶段为基础)采用综合分类方法进行了研究。这种方法提供了对初生幼体和幼体阶段形态的描述,并利用了冲积层凭证材料和 DNA 条形码。为了更好地了解 y 型幼体的进化史和生态重要性,我们开发了一种新的方案,可以从单个幼体标本中获取最大数量的形态生态学和分子数据。这包括对在培养皿中饲养的幼体进行单个标本DNA条形码编码和每日成像,将最后一个幼体的外植体安装在载玻片上作为参考凭证,对随后的幼体蜕皮期进行实时成像,以及对幼体标本进行固定、DNA提取、扩增和测序。通过开发和测试一套针对核和线粒体蛋白编码基因和核糖体基因的新引物,我们展示了如何利用新的序列数据来估算 Facetotecta 的系统发育。我们希望我们的新程序将有助于揭示 Y 型幼虫复杂的系统学,并展示这些迷人的幼虫是如何进化的。此外,我们认为我们的方法应该适用于各种蜕皮海洋无脊椎动物类群的幼体标本。
{"title":"Novel molecular resources for single-specimen barcoding of enigmatic crustacean y-larvae","authors":"Niklas Dreyer, Jørgen Olesen, Mark J. Grygier, Danny Eibye-Jacobsen, Alexandra S. Savchenko, Yoshihisa Fujita, Gregory A. Kolbasov, Ryuji J. Machida, Benny K. K. Chan, Ferran Palero","doi":"10.1071/is23018","DOIUrl":"https://doi.org/10.1071/is23018","url":null,"abstract":"<p>Despite discovery more than 100 years ago and documented global occurrence from shallow waters to the deep sea, the life cycle of the enigmatic crustacean y-larvae isincompletely understood and adult forms remain unknown. To date, only 2 of the 17 formally described species, all based on larval stages, have been investigated using an integrative taxonomic approach. This approach provided descriptions of the morphology of the naupliar and cyprid stages, and made use of exuvial voucher material and DNA barcodes. To improve our knowledge about the evolutionary history and ecological importance of y-larvae, we developed a novel protocol that maximises the amount of morpho-ecological and molecular data that can be harvested from single larval specimens. This includes single-specimen DNA barcoding and daily imaging of y-nauplii reared in culture dishes, mounting of the last naupliar exuviae on a slide as a reference voucher, live imaging of the y-cyprid instar that follows, and fixation, DNA extraction, amplification and sequencing of the y-cyprid specimen. Through development and testing of a suite of new primers for both nuclear and mitochondrial protein-coding and ribosomal genes, we showcase how new sequence data can be used to estimate the phylogeny of Facetotecta. We expect that our novel procedure will help to unravel the complex systematics of y-larvae and show how these fascinating larval forms have evolved. Moreover, we posit that our protocols should work on larval specimens from a diverse array of moulting marine invertebrate taxa.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"9 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140108060","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Olivia Evangelista, Nikolai Tatarnic, Keith Bayless
Ulopinae is a distinctive subfamily of leafhoppers that is widely distributed across the Afrotropical, Palearctic, Indomalayan and Australasian regions. The ulopine fauna of Australia is entirely endemic and includes two tribes of striking appearance, the Ulopini and Cephalelini. Knowledge of these groups is fragmentary and in many instances, no information is available beyond original descriptions. We assess the monophyly, phylogenetic placement and species-level diversity of the Ulopini genus Austrolopa. Phylogenetic analyses based on sequence data from target nuclear loci (18S, 28S, H2A and H3) and mitochondrial genomes (15 genes) for 23 membracoid taxa yielded congruent topologies. Our results provide strong evidence for the monophyly of Ulopinae and a clade consisting of Ulopini + Cephalelini. However, a non-monophyletic Cephalelini arises from within a polyphyletic Ulopini. Austrolopa was strongly recovered as monophyletic in all analyses, a result also supported by morphological features. The genus currently includes six species, three of which are described based on morphological and molecular data: Austrolopa botanica, sp. nov., Austrolopa rotunda, sp. nov. and Austrolopa sublima, sp. nov. A lectotype designation is provided for Austrolopa kingensis Evans, 1937, sp. reval. Our findings illustrate that the Australian Ulopinae is far more diverse than currently circumscribed and several species of Austrolopa are yet to be recognised.
{"title":"Phylogenomics of endemic Australian Ulopinae (Hemiptera: Cicadomorpha: Cicadellidae)","authors":"Olivia Evangelista, Nikolai Tatarnic, Keith Bayless","doi":"10.1071/is23035","DOIUrl":"https://doi.org/10.1071/is23035","url":null,"abstract":"<p>Ulopinae is a distinctive subfamily of leafhoppers that is widely distributed across the Afrotropical, Palearctic, Indomalayan and Australasian regions. The ulopine fauna of Australia is entirely endemic and includes two tribes of striking appearance, the Ulopini and Cephalelini. Knowledge of these groups is fragmentary and in many instances, no information is available beyond original descriptions. We assess the monophyly, phylogenetic placement and species-level diversity of the Ulopini genus <i>Austrolopa</i>. Phylogenetic analyses based on sequence data from target nuclear loci (<i>18S</i>, <i>28S</i>, <i>H2A</i> and <i>H3</i>) and mitochondrial genomes (15 genes) for 23 membracoid taxa yielded congruent topologies. Our results provide strong evidence for the monophyly of Ulopinae and a clade consisting of Ulopini + Cephalelini. However, a non-monophyletic Cephalelini arises from within a polyphyletic Ulopini. <i>Austrolopa</i> was strongly recovered as monophyletic in all analyses, a result also supported by morphological features. The genus currently includes six species, three of which are described based on morphological and molecular data: <i>Austrolopa botanica</i>, <b>sp. nov.</b>, <i>Austrolopa rotunda</i>, <b>sp. nov.</b> and <i>Austrolopa sublima</i>, <b>sp. nov.</b> A lectotype designation is provided for <i>Austrolopa kingensis</i> Evans, 1937, <b>sp. reval.</b> Our findings illustrate that the Australian Ulopinae is far more diverse than currently circumscribed and several species of <i>Austrolopa</i> are yet to be recognised.</p><p>ZooBank: urn:lsid:zoobank.org:pub:1480285B-8F61-4659-A929-2B1EF3168868</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"30 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139765316","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A fine-scale phylogenetic and phylogeographic analysis of Peripatopsis lawrencei s.l. was conducted with both mitochondrial and nuclear DNA sequence data, using both external morphology and scanning electron microscopy of taxonomically important characters. A total of 119 sequences were used for the mitochondrial cytochrome c oxidase subunit I (COI) whereas a single representative specimen from each locality was sequenced for the nuclear 18S rRNA locus. Phylogenetic analyses were conducted on the total COI data set and the combined COI + 18S rRNA data set using a Bayesian analysis and maximum likelihood analyses. For the combined DNA sequence data set, a divergence time estimation was further undertaken in BEAST and specimens placed in a phylogenetic framework including all the described Peripatopsis species from South Africa. In addition, a phylogeographic study was conducted exclusively on P. lawrencei s.s. (clade A) using an analysis of molecular variance and haplotype network. Phylogenetic results indicated that, at the Oubos sample locality, two highly distinct genetic lineages were present (clades A and B), whereas a divergence time estimation suggests a Miocene cladogenesis of the novel Oubos lineage. Marked phylogeographic structure was observed for P. lawrencei s.s. (restricted to clade A) across the distribution range with limited maternal dispersal. Morphologically, the two sympatric lineages at Oubos A and B differed in leg pair number, ventral colour and dorsal scale rank counts, as evident from scanning electron microscopy. Our results support the recognition of a distinct species that occurs in sympatry with P. lawrencei s.s. The new species, P. aereus sp. nov. (clade B) is described and the implication for fine-scale taxonomic studies on saproxylic taxa is discussed.
利用线粒体和核DNA序列数据,并通过外部形态学和扫描电子显微镜观察分类学上的重要特征,对Peripatopsis lawrencei s.l.进行了精细的系统发育和系统地理学分析。线粒体细胞色素 c 氧化酶亚单位 I(COI)共使用了 119 个序列,而核 18S rRNA 位点则对每个地点的一个代表性标本进行了测序。采用贝叶斯分析法和最大似然法对 COI 数据集和 COI + 18S rRNA 数据集进行了系统发育分析。对于合并的 DNA 序列数据集,进一步在 BEAST 中进行了分歧时间估计,并将标本置于一个系统发育框架中,其中包括南非所有已描述的 Peripatopsis 物种。此外,利用分子方差分析和单体型网络,专门对 P. lawrencei s.s.(支系 A)进行了系统地理学研究。系统发育结果表明,在 Oubos 样地,存在两个高度不同的遗传系(支系 A 和 B),而对分歧时间的估计表明,新的 Oubos 系是中新世的支系形成。在整个分布区观察到明显的系统地理结构,P. lawrencei s.s.(局限于支系 A)的母系扩散有限。从形态上看,扫描电子显微镜显示,奥博斯 A 支系和 B 支系在腿对数、腹面颜色和背鳞等级计数方面存在差异。描述了新种 P. aereus sp. nov.(B 支系),并讨论了对无鞘类群进行精细分类研究的意义。ZooBank: urn:lsid:zoobank.org:pub:AB6E0BDA-7B5F-4FD3-A863-BA7C814E278C
{"title":"Sample design in biodiversity studies matters: a fine-scale study of Lawrence’s velvet worm, Peripatopsis lawrencei (Onychophora: Peripatopsidae), reveals hidden diversity","authors":"Julian A. Nieto Lawrence, Savel R. Daniels","doi":"10.1071/is23051","DOIUrl":"https://doi.org/10.1071/is23051","url":null,"abstract":"<p>A fine-scale phylogenetic and phylogeographic analysis of <i>Peripatopsis lawrencei</i> s.l. was conducted with both mitochondrial and nuclear DNA sequence data, using both external morphology and scanning electron microscopy of taxonomically important characters. A total of 119 sequences were used for the mitochondrial cytochrome <i>c</i> oxidase subunit I (<i>COI</i>) whereas a single representative specimen from each locality was sequenced for the nuclear <i>18S</i> rRNA locus. Phylogenetic analyses were conducted on the total <i>COI</i> data set and the combined <i>COI</i> + <i>18S</i> rRNA data set using a Bayesian analysis and maximum likelihood analyses. For the combined DNA sequence data set, a divergence time estimation was further undertaken in BEAST and specimens placed in a phylogenetic framework including all the described <i>Peripatopsis</i> species from South Africa. In addition, a phylogeographic study was conducted exclusively on <i>P. lawrencei</i> s.s. (clade A) using an analysis of molecular variance and haplotype network. Phylogenetic results indicated that, at the Oubos sample locality, two highly distinct genetic lineages were present (clades A and B), whereas a divergence time estimation suggests a Miocene cladogenesis of the novel Oubos lineage. Marked phylogeographic structure was observed for <i>P. lawrencei</i> s.s. (restricted to clade A) across the distribution range with limited maternal dispersal. Morphologically, the two sympatric lineages at Oubos A and B differed in leg pair number, ventral colour and dorsal scale rank counts, as evident from scanning electron microscopy. Our results support the recognition of a distinct species that occurs in sympatry with <i>P. lawrencei</i> s.s. The new species<i>, P. aereus</i> sp. nov. (clade B) is described and the implication for fine-scale taxonomic studies on saproxylic taxa is discussed.</p><p>ZooBank: urn:lsid:zoobank.org:pub:AB6E0BDA-7B5F-4FD3-A863-BA7C814E278C</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"276 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139765124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bernhard A Huber, Guanliang Meng, Tim M Dederichs, Peter Michalik, Martin Forman, Jirí Král
Ninetinae is a group of small to tiny short-legged spiders largely restricted to arid habitats. Among daddy-long-legs spiders (Pholcidae) this is by far the least diverse subfamily but this may partly be a result of inadequate collecting, poor representation in collections or scientific neglect. We build on a large recent collection of the ninetine genus Papiamenta Huber, 2000 from the Leeward Antilles and use cytochrome oxidase 1 (COI ) sequences, extensive scanning electron microscopy data, transmission electron microscopy data and karyotyping to analyse this geographically isolated and poorly known island genus. COI sequences support the split between the two morphologically distinct species on Curaçao but genetic distances between these are surprisingly low (7.4-9.8%; mean 8.6%). The type species P. levii (Gertsch, 1982) may include more than one species but COI and morphology suggest conflicting clade limits. A third species, P. bonay Huber sp. nov. is newly described from Bonaire. Our data on sperm ultrastructure and karyology are puzzling as these suggest different phylogenetic affinities of Papiamenta to other genera. Males transfer sperm as individual sperm (cleistosperm), agreeing with the putative closest relatives as suggested by molecular data, the North American genera Pholcophora and Tolteca . The sex chromosome system (X 1 X 2 X 3 Y ) of P. levii , however, is as in the South American Ninetinae genera Gertschiola and Nerudia but different from the putative closest relatives. ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.
九脚亚科(Ninetinae)是一个由小型到微小短腿蜘蛛组成的亚科,主要局限于干旱地区。在长腿蜘蛛亚科(Pholcidae)中,这是迄今为止种类最少的一个亚科,但部分原因可能是采集不足、在馆藏中代表性差或科学上的忽视。我们以最近从背风安的列斯群岛收集到的大量九脚蜘蛛属 Papiamenta Huber(2000 年)为基础,利用细胞色素氧化酶 1(COI)序列、大量扫描电子显微镜数据、透射电子显微镜数据和核型分析法对这一地理位置孤立、鲜为人知的岛屿属进行了分析。COI 序列支持将库拉索岛上形态上不同的两个物种分开,但它们之间的遗传距离却出奇地低(7.4%-9.8%;平均 8.6%)。模式种 P. levii(Gertsch,1982 年)可能包括一个以上的种,但 COI 和形态学表明其支系界限相互矛盾。第三个物种 P. bonay Huber sp.我们关于精子超微结构和核果学的数据令人费解,因为这些数据表明 Papiamenta 与其他属的系统发育关系不同。雄虫以单个精子(裂殖体)的形式转移精子,这与分子数据所显示的假定近亲--北美的 Pholcophora 属和 Tolteca 属--一致。然而,P. levii 的性染色体系统(X 1 X 2 X 3 Y)与南美洲九节属的 Gertschiola 和 Nerudia 相同,但与假定的近亲不同。ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.
{"title":"Castaways: the Leeward Antilles endemic spider genus <i>Papiamenta</i> (Araneae: Pholcidae).","authors":"Bernhard A Huber, Guanliang Meng, Tim M Dederichs, Peter Michalik, Martin Forman, Jirí Král","doi":"10.1071/IS23052","DOIUrl":"10.1071/IS23052","url":null,"abstract":"<p><p>Ninetinae is a group of small to tiny short-legged spiders largely restricted to arid habitats. Among daddy-long-legs spiders (Pholcidae) this is by far the least diverse subfamily but this may partly be a result of inadequate collecting, poor representation in collections or scientific neglect. We build on a large recent collection of the ninetine genus Papiamenta Huber, 2000 from the Leeward Antilles and use cytochrome oxidase 1 (COI ) sequences, extensive scanning electron microscopy data, transmission electron microscopy data and karyotyping to analyse this geographically isolated and poorly known island genus. COI sequences support the split between the two morphologically distinct species on Curaçao but genetic distances between these are surprisingly low (7.4-9.8%; mean 8.6%). The type species P. levii (Gertsch, 1982) may include more than one species but COI and morphology suggest conflicting clade limits. A third species, P. bonay Huber sp. nov. is newly described from Bonaire. Our data on sperm ultrastructure and karyology are puzzling as these suggest different phylogenetic affinities of Papiamenta to other genera. Males transfer sperm as individual sperm (cleistosperm), agreeing with the putative closest relatives as suggested by molecular data, the North American genera Pholcophora and Tolteca . The sex chromosome system (X 1 X 2 X 3 Y ) of P. levii , however, is as in the South American Ninetinae genera Gertschiola and Nerudia but different from the putative closest relatives. ZooBank: urn:lsid:zoobank.org:pub:7A6A2E84-3A61-4637-AF6F-0E31A9FA79A8.</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"38 ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140923825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. N. Kulagin, U. V. Simakova, A. A. Lunina, A. L. Vereshchaka
A recent molecular phylogenetic and biogeographic study on the krill genus Hansarsia revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in H. microps, H. atlantica and H. tenella. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial COI gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (H3 and ITS1) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic Hansarsia. The strongest divergence was revealed between the two clades of H. tenella, one of which we diagnosed as a new species. Two clades of H. megalops also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in H. microps and H. atlantica are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises.
{"title":"An integrative taxonomic approach to the Atlantic Hansarsia (formerly Nematoscelis) yields new krill taxa (Crustacea: Euphausiidae)","authors":"D. N. Kulagin, U. V. Simakova, A. A. Lunina, A. L. Vereshchaka","doi":"10.1071/is23034","DOIUrl":"https://doi.org/10.1071/is23034","url":null,"abstract":"<p>A recent molecular phylogenetic and biogeographic study on the krill genus <i>Hansarsia</i> revealed undescribed cryptic diversity in the Atlantic. Each of four species analysed encompassed robust molecular clades that were linked to dimorphic males in <i>H. microps</i>, <i>H. atlantica</i> and <i>H. tenella</i>. We tested the robustness and divergence of the observed clades using an integrative approach including (1) three independent species delimitation methods for the mitochondrial <i>COI</i> gene (ASAP, GMYC, bPTP), (2) variability of two nuclear genes (<i>H3</i> and <i>ITS1</i>) and (3) morphological analysis (MDS and PCA) with a dataset of 22 characters scored for 131 specimens. Both molecular and morphological analyses resulted in at least six distinct clades within the Atlantic <i>Hansarsia.</i> The strongest divergence was revealed between the two clades of <i>H. tenella</i>, one of which we diagnosed as a new species. Two clades of <i>H. megalops</i> also showed significant divergence but in the absence of males, we were reluctant to designate new species. Different clades linked to male forms in <i>H. microps</i> and <i>H. atlantica</i> are suggested as an incipient species. We also hypothesise an unusual trend in the evolution of euphausiids, in which visual recognition enhances tactile interaction during mating. Our results show that analyses of ostensibly well studied groups may yet yield taxonomic surprises.</p><p>ZooBank: urn:lsid:zoobank.org:pub:AE045636-50EF-450A-B9B3-9231E8B91522</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"31 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139495995","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Although most members of the freshwater leech family Glossiphoniidae have mid-body somites divided into three annuli, the genus Torix Blanchard, 1893 is distinguished by two-annuli somites. Torix has high species richness in Far East Asia, and three nominal species have been recognised in the Japanese Archipelago and adjacent regions that can be distinguished by a combination of both internal and external morphological characteristics. However, recent studies have shown that these diagnostic features are ontogenetically variable and this has resulted in taxonomic confusion among Torix species endemic to the Japanese Archipelago. In this study, we revisit the taxonomic accounts of T. orientalis (Oka, 1925) and T. tagoi (Oka, 1925), in addition to that of the recently redescribed T. tukubana (Oka, 1935) to clarify the diagnostic characteristics for each of the three species. Our morphological and molecular phylogenetic analyses demonstrated that the three Torix species in Japan are indistinguishable. We therefore conclude that these species should be synonymised and treated as a single species. The specific names orientalis and tagoi were simultaneously established under the genus Oligobdella Moore, 1918, therefore we acted as First Reviser and gave precedence to the name O. tagoi, thus the valid name for the Far East Asian Torix species is T. tagoi unless T. orientalis and T. tagoi are treated as distinct species. There are several type localities for T. tagoi and the name-bearing types have been lost, therefore we designate a neotype for this species to obviate zoological and nomenclatural issues.
尽管淡水水蛭科(Glossiphoniidae)的大多数成员的中体体节都分为三个环,但Torix Blanchard, 1893属的体节却分为两个环。Torix 在远东亚洲的物种丰富度很高,在日本列岛和邻近地区已发现三个标称物种,可通过内部和外部形态特征的组合进行区分。然而,最近的研究表明,这些诊断特征在本体上是可变的,这导致了日本列岛特有的榧属物种在分类上的混乱。在本研究中,我们重新审视了 T. orientalis(Oka,1925 年)和 T. tagoi(Oka,1925 年)的分类学描述,以及最近重新描述的 T. tukubana(Oka,1935 年)的分类学描述,以澄清这三个物种各自的诊断特征。我们的形态学和分子系统学分析表明,日本的这三个榧属物种是无法区分的。因此,我们得出结论,这些物种应被同化为一个物种。tagoi,因此除非 T. orientalis 和 T. tagoi 被视为不同的种,否则远东亚洲榧种的有效名称为 T. tagoi。T. tagoi 的模式产地有几个,而命名模式已经丢失,因此我们为该种指定一个新模式,以避免动物学和命名上的问题。ZooBank: urn:lsid:zoobank.org:pub:E2DBF999-3B51-456F-AB04-A7D138E0AF2D
{"title":"Lumping three nominal species into one: taxonomic revision of amphibian parasitic leeches of Torix in Far East Asia (Hirudinea: Glossiphoniidae)","authors":"Chiaki Kambayashi, Takafumi Nakano","doi":"10.1071/is23042","DOIUrl":"https://doi.org/10.1071/is23042","url":null,"abstract":"<p>Although most members of the freshwater leech family Glossiphoniidae have mid-body somites divided into three annuli, the genus <i>Torix</i> Blanchard, 1893 is distinguished by two-annuli somites. <i>Torix</i> has high species richness in Far East Asia, and three nominal species have been recognised in the Japanese Archipelago and adjacent regions that can be distinguished by a combination of both internal and external morphological characteristics. However, recent studies have shown that these diagnostic features are ontogenetically variable and this has resulted in taxonomic confusion among <i>Torix</i> species endemic to the Japanese Archipelago. In this study, we revisit the taxonomic accounts of <i>T. orientalis</i> (Oka, 1925) and <i>T. tagoi</i> (Oka, 1925), in addition to that of the recently redescribed <i>T. tukubana</i> (Oka, 1935) to clarify the diagnostic characteristics for each of the three species. Our morphological and molecular phylogenetic analyses demonstrated that the three <i>Torix</i> species in Japan are indistinguishable. We therefore conclude that these species should be synonymised and treated as a single species. The specific names <i>orientalis</i> and <i>tagoi</i> were simultaneously established under the genus <i>Oligobdella</i> Moore, 1918, therefore we acted as First Reviser and gave precedence to the name <i>O. tagoi</i>, thus the valid name for the Far East Asian <i>Torix</i> species is <i>T. tagoi</i> unless <i>T. orientalis</i> and <i>T. tagoi</i> are treated as distinct species. There are several type localities for <i>T. tagoi</i> and the name-bearing types have been lost, therefore we designate a neotype for this species to obviate zoological and nomenclatural issues.</p><p>ZooBank: urn:lsid:zoobank.org:pub:E2DBF999-3B51-456F-AB04-A7D138E0AF2D</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"111 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138560369","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Gustavo Hormiga, Siddharth Kulkarni, Miquel Arnedo, Dimitar Dimitrov, Gonzalo Giribet, Robert J. Kallal, Nikolaj Scharff
We complement and expand the existing descriptions of the Australian araneid spider Paraplectanoides crassipes Keyserling, 1886, and provide the first detailed analysis of the male palpal homologies to include examination of the expanded organ and scanning electron micrographs of the palpal sclerites. We study the placement of Paraplectanoides and the classification of the family Araneidae by combining ultraconserved elements with Sanger markers. We also added Sanger sequences of the Australian araneid genus Venomius to the molecular dataset of Scharff et al. (2020) to explore the phylogenetic placement and implications for classification of the family. We evaluate a recent proposal on the classification of the family Araneidae by Kuntner et al. (2023) in which a new family is erected for P. crassipes. Paraplectanoides is monotypic. Examination of the type material shows that Paraplectanoides kochi O. Pickard-Cambridge, 1877 is misplaced in the genus and the name is a senior synonym of the araneid Isoxya penizoides Simon, 1887 (new synonymy) that results in the new combinationIsoxya kochi (O. Pickard-Cambridge, 1877). The classification of Araneidae is revised and the following nomenclatural acts are introduced: Paraplectanoididae Kuntner, Coddington, Agnarsson and Bond, 2023 is a junior synonym of Araneidae Clerck, 1757 new synonymy; phonognathines and nephilines are subfamilies of Araneidae (Subfamily Phonognathinae Simon, 1894 rank resurrected; and Subfamily Nephilinae Simon, 1894 rank resurrected). The results of our analyses corroborate the sister group relationship between Paraplectanoides and the araneid subfamily Nephilinae. Venomius is sister to the Nephilinae + Paraplectanoides clade. The placement of the oarcine araneids and Venomius renders the family Araneidae non-monophyletic if this were to be circumscribed as in Kuntner et al. (2023). In light of the paucity of data that the latter study presents, and in absence of a robust, stable and more densely sampled phylogenetic analysis of Araneidae, the changes and definitions introduced by that classification are premature and could lead to a large number of new families for what once were araneid species if the maximum-crown-clade family definitions were to be used. Consequently, we argue for restoring the familial and subfamilial classification of Araneidae of Dimitrov et al. (2017), Scharff et al. (2020) and Kallal et al. (2020).
我们补充和扩展了澳大利亚蜘蛛Paraplectanoides crassipes Keyserling, 1886的现有描述,并提供了第一个详细的雄性触目同源性分析,包括对扩展器官的检查和触目巩膜的扫描电子显微照片。本文采用超保守元素与Sanger标记相结合的方法研究了拟蜘蛛科的定位和分类。我们还将澳大利亚蜘蛛属Venomius的Sanger序列添加到Scharff et al.(2020)的分子数据集中,以探索该家族的系统发育定位及其分类意义。我们评估了Kuntner等人(2023)最近提出的关于蜘蛛科分类的建议,其中为P. crassipes建立了一个新的科。副仙人掌属单型。对模式材料的检查表明,Paraplectanoides kochi O. Pickard-Cambridge, 1877在属中是错位的,并且该名称是蜘蛛纲Isoxya penizoides Simon, 1887(新同义词)的高级同义词,从而形成新的组合Isoxya kochi (O. Pickard-Cambridge, 1877)。对蜘蛛科的分类进行了修订,并介绍了以下命名行为:Paraplectanoididae Kuntner, Coddington, Agnarsson和Bond, 2023是Araneidae Clerck的初级同义,1757是新同义;phonognathines和nephilines是蜘蛛科(phonognathae Simon亚科,1894等级复活)的亚科;和Nephilinae Simon亚科,1894等级复活)。我们的分析结果证实了Paraplectanoides和蜘蛛亚科Nephilinae之间的姐妹类群关系。金星是Nephilinae + Paraplectanoides分支的姐妹。如果按照Kuntner et al.(2023)的说法来界定的话,卵蛛和毒液蛛的位置使得蛛科是非单系的。鉴于后一项研究提供的数据缺乏,并且缺乏对蜘蛛科进行稳健、稳定和更密集采样的系统发育分析,该分类所引入的变化和定义是过早的,如果使用最大冠枝科定义,可能会导致大量曾经是蜘蛛科物种的新科。因此,我们主张恢复Dimitrov等人(2017)、Scharff等人(2020)和Kallal等人(2020)的蛛科和亚科分类。
{"title":"Genitalic morphology and phylogenomic placement of the Australian spider Paraplectanoides crassipes Keyserling, 1886 (Araneae, Araneidae) with a discussion on the classification of the family Araneidae","authors":"Gustavo Hormiga, Siddharth Kulkarni, Miquel Arnedo, Dimitar Dimitrov, Gonzalo Giribet, Robert J. Kallal, Nikolaj Scharff","doi":"10.1071/is23050","DOIUrl":"https://doi.org/10.1071/is23050","url":null,"abstract":"<p>We complement and expand the existing descriptions of the Australian araneid spider <i>Paraplectanoides crassipes</i> Keyserling, 1886, and provide the first detailed analysis of the male palpal homologies to include examination of the expanded organ and scanning electron micrographs of the palpal sclerites. We study the placement of <i>Paraplectanoides</i> and the classification of the family Araneidae by combining ultraconserved elements with Sanger markers. We also added Sanger sequences of the Australian araneid genus <i>Venomius</i> to the molecular dataset of Scharff <i>et al</i>. (2020) to explore the phylogenetic placement and implications for classification of the family. We evaluate a recent proposal on the classification of the family Araneidae by Kuntner <i>et al.</i> (2023) in which a new family is erected for <i>P. crassipes</i>. <i>Paraplectanoides</i> is monotypic. Examination of the type material shows that <i>Paraplectanoides kochi</i> O. Pickard-Cambridge, 1877 is misplaced in the genus and the name is a senior synonym of the araneid <i>Isoxya penizoides</i> Simon, 1887 (<b>new synonymy</b>) that results in the <b>new combination</b> <i>Isoxya kochi</i> (O. Pickard-Cambridge, 1877). The classification of Araneidae is revised and the following nomenclatural acts are introduced: Paraplectanoididae Kuntner, Coddington, Agnarsson and Bond, 2023 is a junior synonym of Araneidae Clerck, 1757 <b>new synonymy</b>; phonognathines and nephilines are subfamilies of Araneidae (Subfamily Phonognathinae Simon, 1894 <b>rank resurrected</b>; and Subfamily Nephilinae Simon, 1894 <b>rank resurrected</b>). The results of our analyses corroborate the sister group relationship between <i>Paraplectanoides</i> and the araneid subfamily Nephilinae. <i>Venomius</i> is sister to the Nephilinae + <i>Paraplectanoides</i> clade. The placement of the oarcine araneids and <i>Venomius</i> renders the family Araneidae non-monophyletic if this were to be circumscribed as in Kuntner <i>et al</i>. (2023). In light of the paucity of data that the latter study presents, and in absence of a robust, stable and more densely sampled phylogenetic analysis of Araneidae, the changes and definitions introduced by that classification are premature and could lead to a large number of new families for what once were araneid species if the maximum-crown-clade family definitions were to be used. Consequently, we argue for restoring the familial and subfamilial classification of Araneidae of Dimitrov <i>et al</i>. (2017), Scharff <i>et al</i>. (2020) and Kallal <i>et al</i>. (2020).</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"6 1-2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138513011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ayman Khamis Elsayed, Yasuko Kobayashi, Raymond J. Gagné, Makoto Tokuda
The monotypic genus Enigmadiplosis Harris (Diptera: Cecidomyiidae) was placed in the tribe Clinodiplosini based on adult morphology, but the genus is somewhat puzzling because larvae are typical for the tribe Cecidomyiini. In this study, we describe Enigmadiplosis harrisi sp. nov., a pest species that damages young leaves of the ornamental shrub Rhododendron pulchrum in Mie Prefecture, Honshu, Japan. We also conducted a molecular phylogenetic analysis to confirm the tribal placement. The result clearly indicates that Enigmadiplosis belongs to Cecidomyiini and we therefore assign the genus to that tribe. In addition, we redescribe Clinodiplosis rhododendri (Felt) that forms leaf-roll galls on Rhododendron spp. in eastern North America to allay future questions as to the identity and show that this is unrelated to the new Japanese species.
{"title":"New hypothesis of the tribal placement puzzle of Enigmadiplosis (Diptera: Cecidomyiidae), with description of a new pest species on Rhododendron (Ericaceae) in Japan","authors":"Ayman Khamis Elsayed, Yasuko Kobayashi, Raymond J. Gagné, Makoto Tokuda","doi":"10.1071/is23033","DOIUrl":"https://doi.org/10.1071/is23033","url":null,"abstract":"<p>The monotypic genus <i>Enigmadiplosis</i> Harris (Diptera: Cecidomyiidae) was placed in the tribe Clinodiplosini based on adult morphology, but the genus is somewhat puzzling because larvae are typical for the tribe Cecidomyiini. In this study, we describe <i>Enigmadiplosis harrisi</i> sp. nov., a pest species that damages young leaves of the ornamental shrub <i>Rhododendron pulchrum</i> in Mie Prefecture, Honshu, Japan. We also conducted a molecular phylogenetic analysis to confirm the tribal placement. The result clearly indicates that <i>Enigmadiplosis</i> belongs to Cecidomyiini and we therefore assign the genus to that tribe. In addition, we redescribe <i>Clinodiplosis rhododendri</i> (Felt) that forms leaf-roll galls on <i>Rhododendron</i> spp. in eastern North America to allay future questions as to the identity and show that this is unrelated to the new Japanese species.</p><p>ZooBank: urn:lsid:zoobank.org:pub:D2B4A731-271F-4A11-90BB-258725FB9F45</p>","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"20 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-11-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138513020","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Anushree S. Jadhav, Surya Narayanan, Chinta Sidharthan, F. Köhler, N. A. Aravind
ABSTRACT The pachychilid genus Brotia H. Adams, 1866, distributed across South and South-East Asia, comprises 46 currently accepted species. Although Brotia has recently been revised, the systematic treatment of the Indian species requires further scrutiny. This study aims to resolve the phylogenetic relationships between Brotia species from north-east India and estimate the divergence using two mitochondrial markers, cytochrome c oxidase subunit I (COI) and 16S ribosomal RNA (16S). Species delimitation analyses have revealed six to nine distinct species in north-east India instead of the single currently known species. We confirm the monophyly of Brotia from the entire distributional range in South and South-East Asia and show that all Indian species form a single clade nested within the South-East Asian radiation. We conclude that Brotia has a South-East Asian origin, with two independent dispersals into India since the early Eocene and through the Oligocene, eventually splitting from ancestors during the late Cretaceous. Further integrative taxonomic research is needed to resolve the taxonomic status of the candidate species delineated herein and reveal the exact number of species in north-east India. This is the first phylogenetic analysis of Brotia from India, significantly improving our understanding of Indian freshwater gastropod fauna.
{"title":"Phylogeny of freshwater mollusc genus Brotia H. Adams, 1866 (Gastropoda: Pachychilidae) from north-east India","authors":"Anushree S. Jadhav, Surya Narayanan, Chinta Sidharthan, F. Köhler, N. A. Aravind","doi":"10.1071/IS23037","DOIUrl":"https://doi.org/10.1071/IS23037","url":null,"abstract":"ABSTRACT The pachychilid genus Brotia H. Adams, 1866, distributed across South and South-East Asia, comprises 46 currently accepted species. Although Brotia has recently been revised, the systematic treatment of the Indian species requires further scrutiny. This study aims to resolve the phylogenetic relationships between Brotia species from north-east India and estimate the divergence using two mitochondrial markers, cytochrome c oxidase subunit I (COI) and 16S ribosomal RNA (16S). Species delimitation analyses have revealed six to nine distinct species in north-east India instead of the single currently known species. We confirm the monophyly of Brotia from the entire distributional range in South and South-East Asia and show that all Indian species form a single clade nested within the South-East Asian radiation. We conclude that Brotia has a South-East Asian origin, with two independent dispersals into India since the early Eocene and through the Oligocene, eventually splitting from ancestors during the late Cretaceous. Further integrative taxonomic research is needed to resolve the taxonomic status of the candidate species delineated herein and reveal the exact number of species in north-east India. This is the first phylogenetic analysis of Brotia from India, significantly improving our understanding of Indian freshwater gastropod fauna.","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"16 6","pages":"772 - 781"},"PeriodicalIF":2.2,"publicationDate":"2023-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139263321","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The pseudoscorpion family Garypinidae is globally distributed with 79 species in 21 genera and several species represented by Mesozoic and Eocene fossils. This was recently included with the family Larcidae in a unique superfamily, Garypinoidea but there are no phylogenetic hypotheses for the group. Sequence data were obtained for 14 species in 8 genera and numerous outgroup taxa that formed the basis for a preliminary molecular phylogeny. A new subfamily classification is proposed with Protogarypininae, subfamily nov. comprising five genera mostly found in the southern hemisphere, Amblyolpiinae subfamily nov. comprising two genera and Garypininae for the remaining genera. Several new taxa are described including the first Australian species of Aldabrinus, A. rixi sp. nov., a new genus from South-East Asia, Nobilipinus, comprising Nobilipinus nobilis (With, 1906), N. vachoni (Redikorzev, 1938) (that is removed from the synonymy of G. nobilis) and five new species, N. affinis, N. galeatus, N. karenae, N. kohi and N. tricosus, and Solinus pingrup sp. nov. from south-western Australia. Paraldabrinus Beier, 1966 is newly synonymised with Aldabrinus, and Indogarypinus Murthy and Ananthakrishan, 1977 is newly synonymised with Solinus. The holotype of Garypinus mirabilis With, 1907 from Hawaii is redescribed but found to be a tritonymph, rendering the generic identity uncertain. ZooBank: urn:lsid:zoobank.org:pub:E15E4705-0697-4208-9338-A778343996CA
伪蝎科Garypinidae全球分布有21属79种,以中生代和始新世化石为代表。这是最近被纳入家族Larcidae在一个独特的超家族,Garypinoidea,但没有系统发育的假设。获得了8属14种和多个外群分类群的序列数据,为初步分子系统发育奠定了基础。在此基础上,提出了一种新的昆虫亚科分类方法:原Garypininae 11 .亚科包括5属,amblyolpinae 11 .亚科包括2属,其余属为Garypininae。描述了几个新的分类群,包括澳大利亚的第一个Aldabrinus种,a. rixi sp. nov.(东南亚的一个新属),Nobilipinus,包括Nobilipinus nobilis (With, 1906), N. vachoni (Redikorzev, 1938)(从G. nobilis的同义植物中删除)和5个新种,N. affinis, N. galeatus, N. karenae, N. kohi和N. tricosus,以及来自澳大利亚西南部的Solinus pingroup sp. nov.。Aldabrinus Beier(1966)和Indogarypinus Murthy and ananthakriishan(1977)分别为Aldabrinus和Solinus的新同义词。来自夏威夷的Garypinus mirabilis With, 1907的全型被重新描述,但发现是一个三音母,使得一般身份不确定。ZooBank: urn: lsid zoobank.org:酒吧:e15e4705 - 0697 - 4208 - 9338 - a778343996ca
{"title":"A preliminary phylogeny for the pseudoscorpion family Garypinidae (Pseudoscorpiones: Garypinoidea), with new taxa and remarks on the Australasian fauna","authors":"Mark S. Harvey","doi":"10.1071/is23029","DOIUrl":"https://doi.org/10.1071/is23029","url":null,"abstract":"The pseudoscorpion family Garypinidae is globally distributed with 79 species in 21 genera and several species represented by Mesozoic and Eocene fossils. This was recently included with the family Larcidae in a unique superfamily, Garypinoidea but there are no phylogenetic hypotheses for the group. Sequence data were obtained for 14 species in 8 genera and numerous outgroup taxa that formed the basis for a preliminary molecular phylogeny. A new subfamily classification is proposed with Protogarypininae, subfamily nov. comprising five genera mostly found in the southern hemisphere, Amblyolpiinae subfamily nov. comprising two genera and Garypininae for the remaining genera. Several new taxa are described including the first Australian species of Aldabrinus, A. rixi sp. nov., a new genus from South-East Asia, Nobilipinus, comprising Nobilipinus nobilis (With, 1906), N. vachoni (Redikorzev, 1938) (that is removed from the synonymy of G. nobilis) and five new species, N. affinis, N. galeatus, N. karenae, N. kohi and N. tricosus, and Solinus pingrup sp. nov. from south-western Australia. Paraldabrinus Beier, 1966 is newly synonymised with Aldabrinus, and Indogarypinus Murthy and Ananthakrishan, 1977 is newly synonymised with Solinus. The holotype of Garypinus mirabilis With, 1907 from Hawaii is redescribed but found to be a tritonymph, rendering the generic identity uncertain. ZooBank: urn:lsid:zoobank.org:pub:E15E4705-0697-4208-9338-A778343996CA","PeriodicalId":54927,"journal":{"name":"Invertebrate Systematics","volume":"55 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134885673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}